Query 002560
Match_columns 908
No_of_seqs 1045 out of 4863
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 02:27:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002560.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002560hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0614 cGMP-dependent protein 100.0 1.8E-67 3.9E-72 556.0 16.6 420 455-908 136-560 (732)
2 PLN03145 Protein phosphatase 2 100.0 1.3E-44 2.7E-49 395.0 30.2 250 93-389 63-332 (365)
3 KOG0697 Protein phosphatase 1B 100.0 6.2E-44 1.3E-48 349.2 23.4 256 90-392 17-296 (379)
4 KOG0698 Serine/threonine prote 100.0 4.5E-42 9.8E-47 374.6 29.0 253 97-391 42-308 (330)
5 PTZ00224 protein phosphatase 2 100.0 4.6E-40 9.9E-45 360.0 32.1 244 91-391 18-275 (381)
6 COG0631 PTC1 Serine/threonine 100.0 7.8E-41 1.7E-45 352.8 24.2 245 91-390 4-255 (262)
7 PF00481 PP2C: Protein phospha 100.0 6.8E-41 1.5E-45 355.8 15.7 238 97-379 2-254 (254)
8 KOG1113 cAMP-dependent protein 100.0 1E-38 2.2E-43 326.5 12.4 253 456-743 105-359 (368)
9 KOG0700 Protein phosphatase 2C 100.0 2.9E-37 6.3E-42 324.1 20.9 230 112-371 83-380 (390)
10 PRK14559 putative protein seri 100.0 6E-36 1.3E-40 344.7 27.9 254 86-391 366-639 (645)
11 KOG0699 Serine/threonine prote 100.0 1.2E-35 2.6E-40 300.6 17.6 163 193-389 330-505 (542)
12 smart00332 PP2Cc Serine/threon 100.0 2.5E-31 5.4E-36 283.8 28.3 239 95-384 6-255 (255)
13 cd00143 PP2Cc Serine/threonine 100.0 2.3E-31 4.9E-36 284.0 27.8 242 97-386 3-254 (254)
14 KOG0616 cAMP-dependent protein 100.0 3.8E-30 8.2E-35 258.0 12.9 142 766-908 41-184 (355)
15 KOG0598 Ribosomal protein S6 k 100.0 5.7E-30 1.2E-34 266.3 14.0 143 765-908 21-165 (357)
16 KOG0605 NDR and related serine 100.0 3.2E-29 6.9E-34 270.8 14.7 143 765-908 137-281 (550)
17 KOG0592 3-phosphoinositide-dep 100.0 4.2E-29 9.1E-34 269.3 11.9 144 765-908 69-214 (604)
18 KOG0610 Putative serine/threon 99.9 3.5E-27 7.5E-32 247.1 11.4 146 761-907 69-218 (459)
19 KOG0595 Serine/threonine-prote 99.9 2.2E-26 4.8E-31 241.3 15.7 136 767-904 8-145 (429)
20 KOG0615 Serine/threonine prote 99.9 5.7E-26 1.2E-30 237.6 14.6 136 768-904 171-312 (475)
21 KOG0694 Serine/threonine prote 99.9 5.7E-26 1.2E-30 252.3 12.6 145 764-908 363-508 (694)
22 KOG1323 Serine/threonine phosp 99.9 2.1E-24 4.6E-29 217.1 22.5 216 168-389 220-489 (493)
23 KOG0581 Mitogen-activated prot 99.9 5E-25 1.1E-29 229.5 14.2 142 764-908 74-219 (364)
24 KOG0575 Polo-like serine/threo 99.9 1.2E-24 2.6E-29 239.3 16.3 139 769-908 18-158 (592)
25 KOG0580 Serine/threonine prote 99.9 3.1E-25 6.7E-30 216.7 7.1 148 760-908 13-164 (281)
26 KOG0611 Predicted serine/threo 99.9 4E-25 8.8E-30 229.1 7.7 139 769-908 53-193 (668)
27 KOG0608 Warts/lats-like serine 99.9 2E-24 4.4E-29 234.9 11.7 143 765-908 625-769 (1034)
28 KOG0612 Rho-associated, coiled 99.9 6.9E-25 1.5E-29 254.0 5.9 142 766-908 72-215 (1317)
29 KOG0593 Predicted protein kina 99.9 2.5E-24 5.5E-29 216.5 9.1 139 768-908 1-141 (396)
30 KOG0690 Serine/threonine prote 99.9 8.5E-25 1.8E-29 221.0 4.7 145 763-908 162-308 (516)
31 KOG0585 Ca2+/calmodulin-depend 99.9 1.4E-23 2.9E-28 223.1 12.5 144 764-908 92-250 (576)
32 KOG0583 Serine/threonine prote 99.9 6E-23 1.3E-27 227.4 15.4 143 766-908 14-161 (370)
33 KOG0600 Cdc2-related protein k 99.9 1.8E-23 3.9E-28 224.3 10.2 140 766-908 114-258 (560)
34 KOG0591 NIMA (never in mitosis 99.9 2E-24 4.3E-29 215.1 2.5 143 764-908 14-168 (375)
35 KOG0661 MAPK related serine/th 99.9 1.8E-23 3.9E-28 222.6 5.7 140 766-908 7-150 (538)
36 KOG0659 Cdk activating kinase 99.9 1.3E-22 2.8E-27 201.2 11.2 137 769-908 2-141 (318)
37 cd05628 STKc_NDR1 Catalytic do 99.9 3.8E-22 8.2E-27 224.5 16.5 139 769-908 1-141 (363)
38 KOG0597 Serine-threonine prote 99.9 6.8E-23 1.5E-27 221.2 9.2 138 768-908 1-140 (808)
39 PTZ00263 protein kinase A cata 99.9 6.5E-22 1.4E-26 219.5 17.1 145 763-908 12-158 (329)
40 KOG0582 Ste20-like serine/thre 99.9 7.1E-22 1.5E-26 209.0 16.0 140 766-908 23-166 (516)
41 cd05629 STKc_NDR_like_fungal C 99.9 6E-22 1.3E-26 224.1 16.7 139 769-908 1-141 (377)
42 cd05626 STKc_LATS2 Catalytic d 99.9 8.3E-22 1.8E-26 223.2 16.8 138 770-908 2-141 (381)
43 cd05599 STKc_NDR_like Catalyti 99.9 8.3E-22 1.8E-26 222.0 16.3 139 769-908 1-141 (364)
44 KOG0588 Serine/threonine prote 99.9 1.9E-22 4.1E-27 222.4 10.2 141 767-908 10-152 (786)
45 cd05598 STKc_LATS Catalytic do 99.9 1.1E-21 2.4E-26 221.9 16.9 139 769-908 1-141 (376)
46 cd05625 STKc_LATS1 Catalytic d 99.9 1.3E-21 2.8E-26 221.9 16.7 138 770-908 2-141 (382)
47 KOG0663 Protein kinase PITSLRE 99.9 2.2E-22 4.9E-27 205.2 9.1 140 766-908 73-217 (419)
48 PTZ00426 cAMP-dependent protei 99.9 2E-21 4.3E-26 216.2 17.1 150 758-908 19-171 (340)
49 cd05621 STKc_ROCK2 Catalytic d 99.9 2E-21 4.2E-26 218.8 16.4 142 766-908 40-182 (370)
50 cd05627 STKc_NDR2 Catalytic do 99.9 2.2E-21 4.9E-26 218.0 16.8 139 769-908 1-141 (360)
51 cd05612 STKc_PRKX_like Catalyt 99.9 1.8E-21 3.8E-26 212.1 14.7 139 769-908 1-141 (291)
52 cd05596 STKc_ROCK Catalytic do 99.9 2.7E-21 5.8E-26 217.9 16.4 143 765-908 39-182 (370)
53 KOG0986 G protein-coupled rece 99.9 3.2E-22 6.9E-27 211.3 8.2 144 764-908 180-327 (591)
54 cd05587 STKc_cPKC Catalytic do 99.9 3.7E-21 8E-26 213.0 16.7 139 770-908 1-141 (324)
55 KOG0198 MEKK and related serin 99.9 1.8E-21 3.9E-26 207.0 13.3 137 768-908 16-158 (313)
56 cd05622 STKc_ROCK1 Catalytic d 99.9 4E-21 8.7E-26 216.4 16.7 143 765-908 39-182 (371)
57 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 4.4E-21 9.6E-26 213.3 16.7 139 769-908 1-141 (333)
58 cd05597 STKc_DMPK_like Catalyt 99.9 6.5E-21 1.4E-25 211.6 16.6 139 769-908 1-142 (331)
59 cd05615 STKc_cPKC_alpha Cataly 99.9 5.9E-21 1.3E-25 211.2 16.2 139 770-908 1-141 (323)
60 KOG0594 Protein kinase PCTAIRE 99.9 1.5E-21 3.2E-26 203.8 10.5 138 768-908 10-160 (323)
61 KOG0695 Serine/threonine prote 99.9 7.2E-22 1.6E-26 200.4 8.0 145 764-908 245-391 (593)
62 cd05624 STKc_MRCK_beta Catalyt 99.9 8.8E-21 1.9E-25 210.6 16.9 139 769-908 1-142 (331)
63 cd05616 STKc_cPKC_beta Catalyt 99.8 9.3E-21 2E-25 209.7 16.6 139 770-908 1-141 (323)
64 cd05573 STKc_ROCK_NDR_like Cat 99.8 7.3E-21 1.6E-25 213.1 15.6 139 769-908 1-141 (350)
65 cd05571 STKc_PKB Catalytic dom 99.8 7.9E-21 1.7E-25 210.2 15.6 133 775-908 1-135 (323)
66 KOG0696 Serine/threonine prote 99.8 5.4E-22 1.2E-26 206.4 4.8 146 763-908 343-490 (683)
67 KOG0032 Ca2+/calmodulin-depend 99.8 8.9E-21 1.9E-25 209.9 14.7 137 768-904 34-171 (382)
68 cd05601 STKc_CRIK Catalytic do 99.8 1.9E-20 4.2E-25 207.9 16.8 139 769-908 1-142 (330)
69 cd05595 STKc_PKB_beta Catalyti 99.8 1.5E-20 3.2E-25 208.0 15.4 133 775-908 1-135 (323)
70 cd05593 STKc_PKB_gamma Catalyt 99.8 1.7E-20 3.7E-25 207.9 15.6 133 775-908 1-135 (328)
71 cd05631 STKc_GRK4 Catalytic do 99.8 2.5E-20 5.5E-25 202.4 16.4 138 770-908 1-142 (285)
72 cd05588 STKc_aPKC Catalytic do 99.8 1.9E-20 4E-25 207.8 15.7 134 775-908 1-136 (329)
73 cd05623 STKc_MRCK_alpha Cataly 99.8 2.6E-20 5.7E-25 206.9 16.8 139 769-908 1-142 (332)
74 cd05589 STKc_PKN Catalytic dom 99.8 2.6E-20 5.6E-25 206.3 16.2 138 771-908 1-141 (324)
75 cd05591 STKc_nPKC_epsilon Cata 99.8 2.1E-20 4.6E-25 206.7 15.2 134 775-908 1-136 (321)
76 cd05585 STKc_YPK1_like Catalyt 99.8 2.6E-20 5.6E-25 205.1 15.3 131 777-908 1-133 (312)
77 cd05614 STKc_MSK2_N N-terminal 99.8 3.9E-20 8.5E-25 205.6 16.9 139 770-908 1-145 (332)
78 cd05590 STKc_nPKC_eta Catalyti 99.8 2.5E-20 5.4E-25 205.9 15.1 134 775-908 1-136 (320)
79 cd05592 STKc_nPKC_theta_delta 99.8 2.6E-20 5.6E-25 205.4 15.3 134 775-908 1-136 (316)
80 cd05617 STKc_aPKC_zeta Catalyt 99.8 3.1E-20 6.7E-25 205.8 15.4 134 775-908 1-136 (327)
81 cd05594 STKc_PKB_alpha Catalyt 99.8 4.5E-20 9.7E-25 204.4 16.5 133 775-908 1-136 (325)
82 cd05618 STKc_aPKC_iota Catalyt 99.8 3.4E-20 7.3E-25 205.6 15.5 134 775-908 1-136 (329)
83 cd05620 STKc_nPKC_delta Cataly 99.8 3.6E-20 7.9E-25 204.2 15.3 134 775-908 1-136 (316)
84 KOG0192 Tyrosine kinase specif 99.8 2.5E-20 5.4E-25 204.6 13.8 143 762-908 34-184 (362)
85 cd07871 STKc_PCTAIRE3 Catalyti 99.8 5.3E-20 1.2E-24 200.2 15.6 138 767-908 3-143 (288)
86 KOG1379 Serine/threonine prote 99.8 4.3E-19 9.2E-24 180.7 20.9 211 110-386 87-330 (330)
87 KOG0607 MAP kinase-interacting 99.8 8.3E-21 1.8E-25 192.2 8.3 134 771-907 79-215 (463)
88 cd05605 STKc_GRK4_like Catalyt 99.8 9.2E-20 2E-24 198.0 16.4 138 770-908 1-142 (285)
89 KOG0599 Phosphorylase kinase g 99.8 4.1E-21 8.8E-26 190.4 5.1 141 768-908 16-163 (411)
90 cd05619 STKc_nPKC_theta Cataly 99.8 8.2E-20 1.8E-24 201.4 15.6 134 775-908 1-136 (316)
91 cd05570 STKc_PKC Catalytic dom 99.8 7.8E-20 1.7E-24 201.8 15.3 134 775-908 1-136 (318)
92 KOG0662 Cyclin-dependent kinas 99.8 9.9E-21 2.1E-25 176.5 6.8 137 769-908 2-141 (292)
93 KOG0586 Serine/threonine prote 99.8 5.5E-20 1.2E-24 202.9 13.4 142 765-908 52-195 (596)
94 cd05604 STKc_SGK3 Catalytic do 99.8 9.1E-20 2E-24 202.0 15.4 133 775-908 1-136 (325)
95 cd05575 STKc_SGK Catalytic dom 99.8 1E-19 2.2E-24 201.4 15.5 133 775-908 1-136 (323)
96 cd05586 STKc_Sck1_like Catalyt 99.8 1E-19 2.2E-24 202.0 15.3 132 777-908 1-136 (330)
97 cd05603 STKc_SGK2 Catalytic do 99.8 1.2E-19 2.5E-24 200.8 15.4 133 775-908 1-136 (321)
98 cd05610 STKc_MASTL Catalytic d 99.8 1.4E-19 3E-24 218.1 17.2 141 767-908 2-144 (669)
99 cd05602 STKc_SGK1 Catalytic do 99.8 1.2E-19 2.6E-24 201.0 15.5 133 775-908 1-136 (325)
100 cd07869 STKc_PFTAIRE1 Catalyti 99.8 1.4E-19 3E-24 198.5 15.7 137 768-908 4-143 (303)
101 cd05608 STKc_GRK1 Catalytic do 99.8 1.8E-19 3.8E-24 195.2 15.0 131 777-908 1-137 (280)
102 cd05064 PTKc_EphR_A10 Catalyti 99.8 2E-19 4.3E-24 193.2 15.3 140 766-908 2-147 (266)
103 cd05102 PTKc_VEGFR3 Catalytic 99.8 1.4E-19 3E-24 201.8 13.8 141 766-908 4-214 (338)
104 KOG0589 Serine/threonine prote 99.8 3.5E-20 7.7E-25 201.9 8.6 140 767-908 2-146 (426)
105 KOG0658 Glycogen synthase kina 99.8 3.6E-20 7.8E-25 192.9 8.1 130 770-908 25-166 (364)
106 cd05584 STKc_p70S6K Catalytic 99.8 2.2E-19 4.8E-24 198.7 15.0 133 775-908 2-140 (323)
107 cd05580 STKc_PKA Catalytic dom 99.8 3.9E-19 8.5E-24 193.6 16.6 139 769-908 1-141 (290)
108 cd05088 PTKc_Tie2 Catalytic do 99.8 3.2E-19 6.8E-24 195.6 15.6 143 764-908 2-164 (303)
109 cd06649 PKc_MEK2 Catalytic dom 99.8 4.9E-19 1.1E-23 196.6 17.1 140 766-908 2-144 (331)
110 cd07848 STKc_CDKL5 Catalytic d 99.8 3.1E-19 6.6E-24 194.0 14.6 138 769-908 1-140 (287)
111 PRK13184 pknD serine/threonine 99.8 5E-19 1.1E-23 211.7 17.1 140 768-908 1-153 (932)
112 cd05630 STKc_GRK6 Catalytic do 99.8 6.2E-19 1.4E-23 191.4 16.3 138 770-908 1-142 (285)
113 cd05582 STKc_RSK_N N-terminal 99.8 4.1E-19 8.8E-24 196.2 15.0 132 775-908 2-138 (318)
114 KOG0667 Dual-specificity tyros 99.8 3.4E-19 7.4E-24 198.9 14.3 132 770-906 187-327 (586)
115 KOG0033 Ca2+/calmodulin-depend 99.8 3.4E-21 7.4E-26 188.3 -1.4 134 769-904 11-146 (355)
116 PHA03212 serine/threonine kina 99.8 5.1E-19 1.1E-23 200.3 15.9 133 765-908 88-222 (391)
117 cd05607 STKc_GRK7 Catalytic do 99.8 6.2E-19 1.4E-23 190.6 15.8 131 777-908 1-135 (277)
118 cd05632 STKc_GRK5 Catalytic do 99.8 8.3E-19 1.8E-23 190.5 16.6 137 771-908 2-142 (285)
119 cd06650 PKc_MEK1 Catalytic dom 99.8 6.7E-19 1.4E-23 195.6 15.8 140 766-908 2-144 (333)
120 KOG1989 ARK protein kinase fam 99.8 3.8E-19 8.2E-24 204.8 14.0 140 766-908 34-186 (738)
121 KOG0578 p21-activated serine/t 99.8 1.3E-19 2.9E-24 198.2 9.6 137 768-908 272-409 (550)
122 KOG4250 TANK binding protein k 99.8 1.7E-19 3.7E-24 201.6 10.5 132 769-903 13-155 (732)
123 KOG0660 Mitogen-activated prot 99.8 2.3E-19 5.1E-24 186.5 10.7 135 771-908 24-165 (359)
124 KOG1152 Signal transduction se 99.8 1.6E-19 3.6E-24 195.9 9.9 142 767-908 559-710 (772)
125 PF00069 Pkinase: Protein kina 99.8 6.2E-19 1.4E-23 188.3 14.4 135 771-907 1-137 (260)
126 cd07872 STKc_PCTAIRE2 Catalyti 99.8 8.9E-19 1.9E-23 192.6 15.9 138 767-908 4-144 (309)
127 PLN00034 mitogen-activated pro 99.8 3.7E-19 8.1E-24 199.4 13.1 140 764-908 69-208 (353)
128 cd05096 PTKc_DDR1 Catalytic do 99.8 8.2E-19 1.8E-23 192.4 15.4 140 766-908 2-178 (304)
129 cd08228 STKc_Nek6 Catalytic do 99.8 9.4E-19 2E-23 187.9 15.6 140 768-908 1-146 (267)
130 cd05609 STKc_MAST Catalytic do 99.8 1.4E-18 3.1E-23 190.6 16.7 139 769-908 1-141 (305)
131 KOG0574 STE20-like serine/thre 99.8 2E-20 4.3E-25 187.6 1.6 146 757-908 21-169 (502)
132 cd07859 STKc_TDY_MAPK_plant Ca 99.8 1.1E-18 2.4E-23 194.5 15.8 136 770-908 1-143 (338)
133 cd05106 PTKc_CSF-1R Catalytic 99.8 5.8E-19 1.3E-23 199.1 13.4 141 766-908 35-252 (374)
134 cd05104 PTKc_Kit Catalytic dom 99.8 5.3E-19 1.2E-23 199.6 13.1 141 766-908 32-254 (375)
135 cd08227 PK_STRAD_alpha Pseudok 99.8 1E-18 2.2E-23 193.8 14.4 133 773-907 2-140 (327)
136 cd05578 STKc_Yank1 Catalytic d 99.8 1.2E-18 2.6E-23 186.2 14.3 138 770-908 1-140 (258)
137 cd07876 STKc_JNK2 Catalytic do 99.8 1.6E-18 3.5E-23 194.8 15.7 139 767-908 19-163 (359)
138 cd08224 STKc_Nek6_Nek7 Catalyt 99.8 2.7E-18 5.9E-23 184.2 16.3 139 769-908 2-146 (267)
139 cd05574 STKc_phototropin_like 99.8 2.3E-18 5.1E-23 189.9 16.1 139 769-908 1-143 (316)
140 cd06615 PKc_MEK Catalytic doma 99.8 2.7E-18 5.9E-23 188.7 16.4 137 769-908 1-140 (308)
141 PTZ00267 NIMA-related protein 99.8 2.3E-18 5.1E-23 200.4 16.6 138 767-908 65-209 (478)
142 cd07853 STKc_NLK Catalytic dom 99.8 1.4E-18 3.1E-23 196.2 14.2 136 770-908 1-143 (372)
143 cd07873 STKc_PCTAIRE1 Catalyti 99.8 2.8E-18 6.1E-23 187.9 15.9 138 767-908 4-144 (301)
144 cd06646 STKc_MAP4K5 Catalytic 99.8 2.4E-18 5.3E-23 184.8 15.1 139 766-908 6-146 (267)
145 KOG1187 Serine/threonine prote 99.8 1.6E-18 3.4E-23 191.9 13.6 135 769-908 75-217 (361)
146 cd08229 STKc_Nek7 Catalytic do 99.8 1.4E-18 3E-23 186.6 12.7 140 768-908 1-146 (267)
147 cd05114 PTKc_Tec_Rlk Catalytic 99.8 3.4E-18 7.4E-23 182.4 15.6 136 767-908 2-140 (256)
148 cd05105 PTKc_PDGFR_alpha Catal 99.8 2E-18 4.3E-23 195.7 14.4 140 767-908 35-277 (400)
149 KOG0193 Serine/threonine prote 99.8 5E-19 1.1E-23 194.1 9.0 150 753-908 376-528 (678)
150 cd08219 STKc_Nek3 Catalytic do 99.8 5.3E-18 1.2E-22 180.8 16.9 136 770-908 1-140 (255)
151 KOG2345 Serine/threonine prote 99.8 1.1E-18 2.4E-23 171.8 10.2 139 765-907 17-168 (302)
152 cd05066 PTKc_EphR_A Catalytic 99.8 3.2E-18 7E-23 183.9 15.0 139 767-908 2-146 (267)
153 KOG4236 Serine/threonine prote 99.8 1.8E-18 3.8E-23 185.4 12.4 131 771-904 564-700 (888)
154 cd07844 STKc_PCTAIRE_like Cata 99.8 3.9E-18 8.4E-23 185.8 15.5 138 767-908 3-143 (291)
155 cd05033 PTKc_EphR Catalytic do 99.8 4.9E-18 1.1E-22 182.3 15.9 139 767-908 2-146 (266)
156 cd06625 STKc_MEKK3_like Cataly 99.8 4.3E-18 9.2E-23 182.3 15.3 139 769-908 2-144 (263)
157 cd05108 PTKc_EGFR Catalytic do 99.8 3.7E-18 8E-23 188.4 15.0 140 765-908 3-149 (316)
158 cd05065 PTKc_EphR_B Catalytic 99.8 5.3E-18 1.1E-22 182.4 15.9 139 767-908 2-146 (269)
159 PTZ00283 serine/threonine prot 99.8 3.7E-18 8E-23 198.9 15.6 140 767-908 30-183 (496)
160 cd05084 PTKc_Fes Catalytic dom 99.8 3.4E-18 7.5E-23 181.9 14.0 131 775-908 1-134 (252)
161 cd05052 PTKc_Abl Catalytic dom 99.8 5.4E-18 1.2E-22 181.8 15.6 138 766-908 3-144 (263)
162 cd07862 STKc_CDK6 Catalytic do 99.8 5.5E-18 1.2E-22 184.5 15.6 138 769-908 1-150 (290)
163 cd05046 PTK_CCK4 Pseudokinase 99.8 5.3E-18 1.2E-22 183.0 15.2 140 766-908 2-157 (275)
164 KOG4717 Serine/threonine prote 99.8 1E-18 2.2E-23 186.7 9.2 135 771-907 20-158 (864)
165 cd05090 PTKc_Ror1 Catalytic do 99.8 5.2E-18 1.1E-22 184.0 14.9 140 766-908 2-164 (283)
166 cd07874 STKc_JNK3 Catalytic do 99.8 4E-18 8.7E-23 191.3 14.3 139 767-908 15-159 (355)
167 cd07861 STKc_CDK1_euk Catalyti 99.8 7.2E-18 1.6E-22 182.9 15.8 136 770-908 1-141 (285)
168 cd07878 STKc_p38beta_MAPK11 Ca 99.8 3.3E-18 7.2E-23 191.0 13.4 138 768-908 14-158 (343)
169 cd05581 STKc_PDK1 Catalytic do 99.8 4.8E-18 1E-22 183.6 14.3 140 769-908 1-142 (280)
170 KOG0194 Protein tyrosine kinas 99.8 2.9E-18 6.3E-23 190.7 12.7 140 768-908 156-302 (474)
171 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 7.9E-18 1.7E-22 182.6 15.9 137 768-908 3-148 (284)
172 cd05103 PTKc_VEGFR2 Catalytic 99.8 3.6E-18 7.7E-23 190.7 13.5 141 766-908 4-219 (343)
173 cd06619 PKc_MKK5 Catalytic dom 99.8 7.1E-18 1.5E-22 182.5 15.3 135 769-908 1-135 (279)
174 cd06656 STKc_PAK3 Catalytic do 99.8 8.3E-18 1.8E-22 183.8 15.9 137 768-908 18-155 (297)
175 cd05613 STKc_MSK1_N N-terminal 99.8 7.9E-18 1.7E-22 183.2 15.7 139 770-908 1-145 (290)
176 cd08529 STKc_FA2-like Catalyti 99.8 1.2E-17 2.5E-22 178.1 16.7 137 770-908 1-141 (256)
177 cd05059 PTKc_Tec_like Catalyti 99.8 4.1E-18 8.8E-23 181.9 13.0 136 767-908 2-140 (256)
178 cd07863 STKc_CDK4 Catalytic do 99.8 6.6E-18 1.4E-22 183.6 14.8 137 770-908 1-148 (288)
179 cd07847 STKc_CDKL1_4 Catalytic 99.8 1E-17 2.2E-22 181.8 16.0 138 769-908 1-140 (286)
180 cd06613 STKc_MAP4K3_like Catal 99.8 1.5E-17 3.2E-22 177.9 17.1 137 768-908 2-141 (262)
181 cd05113 PTKc_Btk_Bmx Catalytic 99.8 8.3E-18 1.8E-22 179.6 15.0 136 767-908 2-140 (256)
182 cd05089 PTKc_Tie1 Catalytic do 99.8 7.7E-18 1.7E-22 184.0 15.1 139 768-908 1-159 (297)
183 cd06645 STKc_MAP4K3 Catalytic 99.8 3.2E-18 6.8E-23 183.9 11.7 138 767-908 7-146 (267)
184 cd06652 STKc_MEKK2 Catalytic d 99.8 1.2E-17 2.5E-22 179.3 16.0 139 769-908 2-146 (265)
185 cd07875 STKc_JNK1 Catalytic do 99.8 8E-18 1.7E-22 189.5 15.3 139 767-908 22-166 (364)
186 cd06611 STKc_SLK_like Catalyti 99.8 4.1E-18 9E-23 184.4 12.5 137 768-908 4-143 (280)
187 cd05098 PTKc_FGFR1 Catalytic d 99.8 8.1E-18 1.7E-22 184.8 14.9 141 766-908 15-180 (307)
188 cd05633 STKc_GRK3 Catalytic do 99.8 8.3E-18 1.8E-22 182.0 14.7 133 776-908 1-137 (279)
189 cd07841 STKc_CDK7 Catalytic do 99.8 9.2E-18 2E-22 183.5 15.2 137 770-908 1-142 (298)
190 cd05577 STKc_GRK Catalytic dom 99.8 9E-18 2E-22 181.5 14.9 131 777-908 1-135 (277)
191 cd05072 PTKc_Lyn Catalytic dom 99.8 9.7E-18 2.1E-22 179.4 15.0 137 766-908 3-143 (261)
192 cd06654 STKc_PAK1 Catalytic do 99.7 1.3E-17 2.8E-22 182.1 16.2 137 768-908 19-156 (296)
193 PTZ00266 NIMA-related protein 99.7 1.2E-17 2.6E-22 200.7 17.1 136 766-903 10-160 (1021)
194 cd05107 PTKc_PDGFR_beta Cataly 99.7 5.7E-18 1.2E-22 191.9 13.7 142 765-908 33-279 (401)
195 cd05051 PTKc_DDR Catalytic dom 99.7 8.3E-18 1.8E-22 183.6 14.5 140 766-908 2-170 (296)
196 cd06638 STKc_myosinIIIA Cataly 99.7 1.3E-17 2.8E-22 181.1 15.5 138 767-908 16-164 (286)
197 KOG0666 Cyclin C-dependent kin 99.7 1.2E-18 2.5E-23 176.3 6.6 139 767-908 22-176 (438)
198 cd05039 PTKc_Csk_like Catalyti 99.7 1.3E-17 2.8E-22 177.9 15.2 136 766-908 3-142 (256)
199 cd06644 STKc_STK10_LOK Catalyt 99.7 1.1E-17 2.3E-22 182.4 14.7 136 769-908 12-150 (292)
200 PHA03209 serine/threonine kina 99.7 8.7E-18 1.9E-22 188.5 14.4 131 767-908 64-197 (357)
201 cd06622 PKc_MAPKK_PBS2_like Ca 99.7 5.2E-18 1.1E-22 184.3 12.1 137 769-908 1-143 (286)
202 PTZ00036 glycogen synthase kin 99.7 1.3E-17 2.8E-22 192.0 16.0 133 767-908 64-211 (440)
203 cd05093 PTKc_TrkB Catalytic do 99.7 1.3E-17 2.9E-22 181.3 15.3 139 766-908 2-160 (288)
204 cd05048 PTKc_Ror Catalytic Dom 99.7 9.4E-18 2E-22 181.9 14.0 140 766-908 2-164 (283)
205 cd05053 PTKc_FGFR Catalytic do 99.7 1.4E-17 3.1E-22 181.5 15.5 142 765-908 8-172 (293)
206 KOG0197 Tyrosine kinases [Sign 99.7 2.1E-18 4.5E-23 188.6 8.7 138 765-908 202-343 (468)
207 KOG0604 MAP kinase-activated p 99.7 1.1E-18 2.5E-23 175.6 6.1 129 768-904 60-197 (400)
208 cd08221 STKc_Nek9 Catalytic do 99.7 2E-17 4.3E-22 176.5 16.1 137 770-908 1-141 (256)
209 PHA02988 hypothetical protein; 99.7 1.2E-17 2.6E-22 181.1 14.6 145 761-908 10-163 (283)
210 cd08223 STKc_Nek4 Catalytic do 99.7 2.4E-17 5.1E-22 175.9 16.6 137 770-908 1-142 (257)
211 cd05148 PTKc_Srm_Brk Catalytic 99.7 5.7E-18 1.2E-22 181.2 11.7 137 767-908 4-144 (261)
212 cd05611 STKc_Rim15_like Cataly 99.7 1.3E-17 2.8E-22 178.4 14.4 134 775-908 2-137 (260)
213 cd05109 PTKc_HER2 Catalytic do 99.7 1.8E-17 3.8E-22 179.4 15.6 139 766-908 4-149 (279)
214 cd07846 STKc_CDKL2_3 Catalytic 99.7 1.1E-17 2.3E-22 181.7 13.9 138 769-908 1-140 (286)
215 KOG0668 Casein kinase II, alph 99.7 6.2E-19 1.3E-23 170.9 3.6 131 767-904 36-168 (338)
216 PHA03211 serine/threonine kina 99.7 1.4E-17 3E-22 191.1 15.4 130 768-908 168-300 (461)
217 cd06630 STKc_MEKK1 Catalytic d 99.7 1.3E-17 2.8E-22 179.1 14.3 136 770-906 1-141 (268)
218 cd06628 STKc_MAPKKK_Byr2_like 99.7 1.3E-17 2.9E-22 179.0 14.3 138 770-908 1-146 (267)
219 cd05068 PTKc_Frk_like Catalyti 99.7 2E-17 4.3E-22 177.1 15.6 137 766-908 3-143 (261)
220 cd06629 STKc_MAPKKK_Bck1_like 99.7 2E-17 4.3E-22 178.2 15.6 138 770-908 2-148 (272)
221 cd05097 PTKc_DDR_like Catalyti 99.7 1E-17 2.2E-22 182.9 13.6 139 767-908 3-169 (295)
222 cd05101 PTKc_FGFR2 Catalytic d 99.7 1.5E-17 3.2E-22 182.5 14.8 142 765-908 11-177 (304)
223 PF13672 PP2C_2: Protein phosp 99.7 2.5E-17 5.4E-22 170.5 15.7 181 100-351 3-194 (212)
224 cd05079 PTKc_Jak1_rpt2 Catalyt 99.7 1.3E-17 2.9E-22 180.9 14.4 136 770-908 5-149 (284)
225 KOG1035 eIF-2alpha kinase GCN2 99.7 1.6E-18 3.6E-23 203.2 7.5 138 768-908 478-737 (1351)
226 cd07832 STKc_CCRK Catalytic do 99.7 1.8E-17 3.9E-22 179.9 15.2 136 770-908 1-139 (286)
227 cd05032 PTKc_InsR_like Catalyt 99.7 2E-17 4.2E-22 178.7 15.4 140 766-908 3-159 (277)
228 cd06617 PKc_MKK3_6 Catalytic d 99.7 1.7E-17 3.7E-22 179.8 15.0 137 769-908 1-144 (283)
229 KOG0577 Serine/threonine prote 99.7 8.4E-19 1.8E-23 190.3 4.5 136 771-908 28-166 (948)
230 cd05055 PTKc_PDGFR Catalytic d 99.7 1.7E-17 3.6E-22 181.9 14.9 142 765-908 31-181 (302)
231 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.7 2.1E-17 4.5E-22 179.3 15.5 135 771-908 6-147 (283)
232 cd05099 PTKc_FGFR4 Catalytic d 99.7 2E-17 4.4E-22 182.2 15.6 141 766-908 9-174 (314)
233 cd07839 STKc_CDK5 Catalytic do 99.7 1.1E-17 2.4E-22 181.4 13.2 136 770-908 1-139 (284)
234 cd05063 PTKc_EphR_A2 Catalytic 99.7 2.4E-17 5.2E-22 177.1 15.4 140 766-908 2-147 (268)
235 cd06655 STKc_PAK2 Catalytic do 99.7 3E-17 6.4E-22 179.3 16.2 137 768-908 18-155 (296)
236 PHA03207 serine/threonine kina 99.7 2.1E-17 4.6E-22 187.8 15.6 132 767-908 90-225 (392)
237 cd06620 PKc_MAPKK_Byr1_like Ca 99.7 1E-17 2.2E-22 181.7 12.4 140 766-908 2-144 (284)
238 cd08226 PK_STRAD_beta Pseudoki 99.7 1.1E-17 2.4E-22 185.5 13.0 132 775-908 4-141 (328)
239 cd05034 PTKc_Src_like Catalyti 99.7 3.2E-17 7E-22 175.4 16.0 137 766-908 3-143 (261)
240 cd06653 STKc_MEKK3_like_1 Cata 99.7 3.3E-17 7.1E-22 175.8 16.0 139 769-908 2-146 (264)
241 cd07837 STKc_CdkB_plant Cataly 99.7 2.7E-17 5.8E-22 179.5 15.5 138 769-908 1-151 (295)
242 cd05572 STKc_cGK_PKG Catalytic 99.7 2.1E-17 4.5E-22 177.0 14.4 131 777-908 1-133 (262)
243 cd06631 STKc_YSK4 Catalytic do 99.7 2.4E-17 5.3E-22 176.8 14.9 137 770-908 1-142 (265)
244 cd05057 PTKc_EGFR_like Catalyt 99.7 2.9E-17 6.3E-22 177.7 15.6 139 766-908 4-149 (279)
245 cd07870 STKc_PFTAIRE2 Catalyti 99.7 2.9E-17 6.4E-22 178.9 15.6 137 768-908 4-143 (291)
246 cd05606 STKc_beta_ARK Catalyti 99.7 2.3E-17 4.9E-22 178.5 14.6 133 776-908 1-137 (278)
247 cd05061 PTKc_InsR Catalytic do 99.7 3E-17 6.5E-22 178.5 15.5 139 767-908 4-159 (288)
248 cd05049 PTKc_Trk Catalytic dom 99.7 1.3E-17 2.9E-22 180.4 12.6 140 766-908 2-162 (280)
249 cd05095 PTKc_DDR2 Catalytic do 99.7 2.3E-17 4.9E-22 180.2 14.5 138 768-908 4-170 (296)
250 cd06643 STKc_SLK Catalytic dom 99.7 2.2E-17 4.8E-22 179.0 14.2 134 771-908 7-143 (282)
251 cd08218 STKc_Nek1 Catalytic do 99.7 4.7E-17 1E-21 173.6 16.5 137 770-908 1-141 (256)
252 cd05082 PTKc_Csk Catalytic dom 99.7 3.4E-17 7.4E-22 174.7 15.4 135 766-908 3-142 (256)
253 cd07843 STKc_CDC2L1 Catalytic 99.7 1.4E-17 3.1E-22 181.5 12.6 139 767-908 3-146 (293)
254 KOG0579 Ste20-like serine/thre 99.7 7.1E-19 1.5E-23 191.7 2.3 136 769-908 32-170 (1187)
255 cd05071 PTKc_Src Catalytic dom 99.7 3.1E-17 6.6E-22 175.8 14.9 135 767-908 4-142 (262)
256 cd07836 STKc_Pho85 Catalytic d 99.7 3.5E-17 7.6E-22 177.4 15.4 135 770-908 1-140 (284)
257 cd06651 STKc_MEKK3 Catalytic d 99.7 3.8E-17 8.3E-22 175.4 15.4 139 769-908 2-146 (266)
258 cd06610 STKc_OSR1_SPAK Catalyt 99.7 5.1E-17 1.1E-21 174.2 16.2 137 769-908 1-142 (267)
259 cd06626 STKc_MEKK4 Catalytic d 99.7 4.1E-17 8.8E-22 174.8 15.4 137 770-908 1-139 (264)
260 cd06640 STKc_MST4 Catalytic do 99.7 2.6E-17 5.6E-22 177.9 13.9 137 769-908 4-141 (277)
261 KOG4645 MAPKKK (MAP kinase kin 99.7 5.7E-19 1.2E-23 207.9 1.0 176 730-908 1195-1374(1509)
262 cd05038 PTKc_Jak_rpt2 Catalyti 99.7 3.1E-17 6.7E-22 177.8 14.5 138 768-908 3-149 (284)
263 KOG1290 Serine/threonine prote 99.7 2.8E-17 6.1E-22 175.8 13.7 131 769-904 78-224 (590)
264 cd05100 PTKc_FGFR3 Catalytic d 99.7 3.5E-17 7.7E-22 182.0 15.3 140 767-908 10-174 (334)
265 KOG0201 Serine/threonine prote 99.7 1.4E-18 3.1E-23 184.2 3.8 137 769-908 13-151 (467)
266 cd05094 PTKc_TrkC Catalytic do 99.7 4.1E-17 8.8E-22 177.8 15.3 139 766-908 2-163 (291)
267 cd05579 STKc_MAST_like Catalyt 99.7 2.2E-17 4.7E-22 176.7 13.0 131 777-908 1-133 (265)
268 cd05054 PTKc_VEGFR Catalytic d 99.7 1.7E-17 3.7E-22 184.5 12.6 140 767-908 5-213 (337)
269 KOG0983 Mitogen-activated prot 99.7 2.6E-18 5.7E-23 170.8 5.3 141 765-908 88-232 (391)
270 cd08220 STKc_Nek8 Catalytic do 99.7 5.5E-17 1.2E-21 172.9 15.9 134 770-905 1-138 (256)
271 cd06641 STKc_MST3 Catalytic do 99.7 3.5E-17 7.7E-22 176.9 14.6 136 770-908 5-141 (277)
272 cd06623 PKc_MAPKK_plant_like C 99.7 5.1E-17 1.1E-21 173.9 15.4 137 769-908 1-140 (264)
273 cd06917 STKc_NAK1_like Catalyt 99.7 3.4E-17 7.3E-22 176.9 14.0 137 770-908 2-141 (277)
274 cd05042 PTKc_Aatyk Catalytic d 99.7 3.3E-17 7.1E-22 176.3 13.7 130 776-908 2-140 (269)
275 cd06632 STKc_MEKK1_plant Catal 99.7 4.3E-17 9.3E-22 173.9 14.5 138 770-908 1-142 (258)
276 cd06637 STKc_TNIK Catalytic do 99.7 2.8E-17 6.1E-22 177.0 13.2 136 769-908 6-151 (272)
277 cd05067 PTKc_Lck_Blk Catalytic 99.7 4.4E-17 9.6E-22 174.3 14.6 136 766-908 3-142 (260)
278 cd06639 STKc_myosinIIIB Cataly 99.7 7.4E-17 1.6E-21 175.7 16.5 137 768-908 21-168 (291)
279 cd05111 PTK_HER3 Pseudokinase 99.7 4E-17 8.6E-22 176.7 14.2 139 766-908 4-149 (279)
280 cd05062 PTKc_IGF-1R Catalytic 99.7 5.4E-17 1.2E-21 175.4 15.2 139 767-908 4-159 (277)
281 cd05047 PTKc_Tie Catalytic dom 99.7 4.6E-17 9.9E-22 175.3 14.6 131 776-908 2-152 (270)
282 cd07845 STKc_CDK10 Catalytic d 99.7 5E-17 1.1E-21 178.7 15.1 139 767-908 5-148 (309)
283 cd05083 PTKc_Chk Catalytic dom 99.7 4.6E-17 9.9E-22 173.5 14.3 134 766-908 3-140 (254)
284 PRK09188 serine/threonine prot 99.7 4.5E-17 9.7E-22 178.9 14.5 133 766-908 15-152 (365)
285 cd06609 STKc_MST3_like Catalyt 99.7 3.6E-17 7.9E-22 176.4 13.6 137 769-908 1-138 (274)
286 cd07842 STKc_CDK8_like Catalyt 99.7 5.4E-17 1.2E-21 178.9 15.3 137 770-908 1-152 (316)
287 cd06612 STKc_MST1_2 Catalytic 99.7 5.7E-17 1.2E-21 172.8 14.9 135 768-908 2-139 (256)
288 cd05583 STKc_MSK_N N-terminal 99.7 5.4E-17 1.2E-21 176.5 15.0 139 770-908 1-145 (288)
289 cd05091 PTKc_Ror2 Catalytic do 99.7 1.8E-17 3.9E-22 179.7 11.2 140 766-908 2-164 (283)
290 cd05112 PTKc_Itk Catalytic dom 99.7 6.9E-17 1.5E-21 172.2 15.5 136 767-908 2-140 (256)
291 cd05036 PTKc_ALK_LTK Catalytic 99.7 6.3E-17 1.4E-21 174.9 15.3 137 766-905 3-153 (277)
292 cd06658 STKc_PAK5 Catalytic do 99.7 2.3E-17 5.1E-22 179.7 12.0 136 769-908 22-158 (292)
293 cd07860 STKc_CDK2_3 Catalytic 99.7 4.6E-17 9.9E-22 176.6 14.0 136 770-908 1-140 (284)
294 PHA03390 pk1 serine/threonine- 99.7 5E-17 1.1E-21 174.7 14.1 132 768-907 13-149 (267)
295 cd05070 PTKc_Fyn_Yrk Catalytic 99.7 4.8E-17 1E-21 174.0 14.0 136 766-908 3-142 (260)
296 cd07880 STKc_p38gamma_MAPK12 C 99.7 6.3E-17 1.4E-21 180.6 15.4 138 768-908 14-158 (343)
297 cd07850 STKc_JNK Catalytic dom 99.7 6.9E-17 1.5E-21 181.1 15.8 138 768-908 15-158 (353)
298 cd05035 PTKc_Axl_like Catalyti 99.7 5.3E-17 1.2E-21 174.8 14.4 136 771-908 1-153 (273)
299 cd06647 STKc_PAK_I Catalytic d 99.7 6.2E-17 1.3E-21 176.5 15.0 137 768-908 18-155 (293)
300 cd05092 PTKc_TrkA Catalytic do 99.7 5E-17 1.1E-21 176.0 14.1 139 766-908 2-162 (280)
301 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.7 1.9E-17 4.1E-22 177.0 10.7 128 775-906 1-138 (258)
302 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.7 4.2E-17 9E-22 176.1 13.4 126 776-905 2-154 (274)
303 cd06608 STKc_myosinIII_like Ca 99.7 7.7E-17 1.7E-21 173.6 15.4 137 768-908 5-153 (275)
304 cd07849 STKc_ERK1_2_like Catal 99.7 5.2E-17 1.1E-21 180.8 14.4 136 769-908 5-146 (336)
305 cd05050 PTKc_Musk Catalytic do 99.7 5.3E-17 1.1E-21 176.6 14.0 139 767-908 3-170 (288)
306 cd07833 STKc_CDKL Catalytic do 99.7 6.4E-17 1.4E-21 175.7 14.6 138 769-908 1-140 (288)
307 cd06605 PKc_MAPKK Catalytic do 99.7 3.5E-17 7.5E-22 175.5 11.9 137 769-908 1-141 (265)
308 cd06607 STKc_TAO Catalytic dom 99.7 7.7E-17 1.7E-21 177.0 14.9 138 769-908 15-155 (307)
309 cd06636 STKc_MAP4K4_6 Catalyti 99.7 7.6E-17 1.6E-21 174.7 14.7 138 767-908 14-161 (282)
310 cd05073 PTKc_Hck Catalytic dom 99.7 1.2E-16 2.6E-21 171.0 16.0 136 766-908 3-142 (260)
311 cd06627 STKc_Cdc7_like Catalyt 99.7 1.2E-16 2.7E-21 169.8 16.1 137 770-908 1-139 (254)
312 PLN00009 cyclin-dependent kina 99.7 1.3E-16 2.9E-21 174.0 16.5 135 768-905 1-139 (294)
313 cd05069 PTKc_Yes Catalytic dom 99.7 1.1E-16 2.4E-21 171.3 15.6 135 767-908 4-142 (260)
314 cd06642 STKc_STK25-YSK1 Cataly 99.7 2.4E-17 5.2E-22 178.2 10.5 136 770-908 5-141 (277)
315 cd05060 PTKc_Syk_like Catalyti 99.7 9.2E-17 2E-21 171.5 14.8 130 775-908 1-135 (257)
316 cd08217 STKc_Nek2 Catalytic do 99.7 9.8E-17 2.1E-21 171.7 15.0 137 770-908 1-150 (265)
317 cd05075 PTKc_Axl Catalytic dom 99.7 7.4E-17 1.6E-21 173.7 14.1 135 772-908 2-152 (272)
318 cd06624 STKc_ASK Catalytic dom 99.7 1.2E-16 2.6E-21 171.8 15.6 135 769-907 8-148 (268)
319 cd06621 PKc_MAPKK_Pek1_like Ca 99.7 1.4E-16 3E-21 173.2 16.2 137 769-908 1-145 (287)
320 cd05041 PTKc_Fes_like Catalyti 99.7 7.7E-17 1.7E-21 171.3 13.9 130 775-908 1-133 (251)
321 PHA03210 serine/threonine kina 99.7 3.7E-17 8E-22 191.1 12.4 140 767-908 146-307 (501)
322 cd05045 PTKc_RET Catalytic dom 99.7 7E-17 1.5E-21 175.8 13.8 136 770-908 1-167 (290)
323 smart00219 TyrKc Tyrosine kina 99.7 7.8E-17 1.7E-21 171.8 13.9 135 771-908 1-143 (258)
324 cd00192 PTKc Catalytic domain 99.7 9.2E-17 2E-21 171.5 14.4 131 775-908 1-145 (262)
325 cd05116 PTKc_Syk Catalytic dom 99.7 8E-17 1.7E-21 172.0 13.8 130 776-908 2-135 (257)
326 cd05056 PTKc_FAK Catalytic dom 99.7 1.2E-16 2.6E-21 172.0 15.2 139 766-908 3-147 (270)
327 cd05110 PTKc_HER4 Catalytic do 99.7 8.1E-17 1.8E-21 176.5 14.0 140 765-908 3-149 (303)
328 cd05115 PTKc_Zap-70 Catalytic 99.7 1.1E-16 2.4E-21 171.0 14.6 129 776-908 2-135 (257)
329 cd07865 STKc_CDK9 Catalytic do 99.7 1.2E-16 2.5E-21 175.6 15.2 139 767-908 10-159 (310)
330 cd07855 STKc_ERK5 Catalytic do 99.7 6.4E-17 1.4E-21 179.9 13.2 137 769-908 5-147 (334)
331 PF07714 Pkinase_Tyr: Protein 99.7 1.1E-16 2.4E-21 171.2 14.4 134 772-908 2-143 (259)
332 PTZ00284 protein kinase; Provi 99.7 1.2E-16 2.7E-21 185.8 16.1 134 767-905 127-269 (467)
333 cd08225 STKc_Nek5 Catalytic do 99.7 1.4E-16 3.1E-21 169.8 15.3 135 770-906 1-139 (257)
334 cd06659 STKc_PAK6 Catalytic do 99.7 5.1E-17 1.1E-21 177.5 12.0 136 769-908 21-157 (297)
335 cd07831 STKc_MOK Catalytic dom 99.7 1.3E-16 2.8E-21 172.8 15.0 134 771-908 1-139 (282)
336 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.7 9.9E-17 2.1E-21 172.6 14.0 131 775-908 1-140 (269)
337 KOG0618 Serine/threonine phosp 99.7 1.3E-16 2.8E-21 182.7 15.5 219 128-391 549-776 (1081)
338 cd07868 STKc_CDK8 Catalytic do 99.7 8.4E-17 1.8E-21 177.6 13.7 122 774-902 6-142 (317)
339 cd05147 RIO1_euk RIO kinase fa 99.7 3.6E-17 7.9E-22 165.2 9.7 129 774-907 2-156 (190)
340 KOG0984 Mitogen-activated prot 99.7 2.4E-17 5.2E-22 157.9 7.8 139 767-908 44-189 (282)
341 cd05037 PTK_Jak_rpt1 Pseudokin 99.7 9.4E-17 2E-21 171.4 13.3 125 775-905 1-138 (259)
342 cd07856 STKc_Sty1_Hog1 Catalyt 99.7 1.7E-16 3.7E-21 175.9 15.8 138 768-908 9-148 (328)
343 cd05085 PTKc_Fer Catalytic dom 99.7 1.4E-16 3.1E-21 169.1 14.6 130 775-908 1-133 (250)
344 cd06635 STKc_TAO1 Catalytic do 99.7 1.5E-16 3.2E-21 175.6 15.1 138 769-908 25-165 (317)
345 cd05123 STKc_AGC Catalytic dom 99.7 1.3E-16 2.9E-21 169.3 14.1 131 777-908 1-133 (250)
346 cd07864 STKc_CDK12 Catalytic d 99.7 1.2E-16 2.7E-21 174.9 14.0 139 767-908 5-156 (302)
347 KOG0584 Serine/threonine prote 99.7 3.4E-17 7.3E-22 181.2 9.4 137 771-908 42-186 (632)
348 cd07877 STKc_p38alpha_MAPK14 C 99.7 2E-16 4.4E-21 176.7 15.8 138 768-908 16-160 (345)
349 cd07840 STKc_CDK9_like Catalyt 99.7 1.7E-16 3.7E-21 172.1 14.9 135 771-908 1-140 (287)
350 KOG1163 Casein kinase (serine/ 99.7 1.1E-16 2.3E-21 156.8 11.7 136 765-906 11-149 (341)
351 cd07857 STKc_MPK1 Catalytic do 99.7 1.9E-16 4E-21 176.1 15.3 137 770-908 1-145 (332)
352 KOG4279 Serine/threonine prote 99.7 5.1E-17 1.1E-21 179.3 10.5 130 775-908 581-716 (1226)
353 cd06648 STKc_PAK_II Catalytic 99.7 2.6E-16 5.5E-21 171.0 15.7 135 770-908 20-155 (285)
354 cd05086 PTKc_Aatyk2 Catalytic 99.7 1.4E-16 3.1E-21 171.2 13.6 130 776-908 2-139 (268)
355 cd08530 STKc_CNK2-like Catalyt 99.7 2.2E-16 4.8E-21 168.1 14.7 137 770-908 1-143 (256)
356 cd08215 STKc_Nek Catalytic dom 99.7 3.5E-16 7.6E-21 166.6 16.1 137 770-908 1-143 (258)
357 cd05040 PTKc_Ack_like Catalyti 99.7 1.7E-16 3.6E-21 169.4 13.6 130 775-908 1-137 (257)
358 cd06606 STKc_MAPKKK Catalytic 99.7 3.8E-16 8.2E-21 166.3 16.0 137 770-908 1-141 (260)
359 cd05077 PTK_Jak1_rpt1 Pseudoki 99.7 2.3E-16 4.9E-21 169.1 14.3 128 775-906 1-143 (262)
360 cd05122 PKc_STE Catalytic doma 99.7 3.9E-16 8.4E-21 165.5 15.9 135 770-908 1-138 (253)
361 cd06633 STKc_TAO3 Catalytic do 99.7 3.4E-16 7.4E-21 172.4 15.8 136 771-908 23-161 (313)
362 cd07858 STKc_TEY_MAPK_plant Ca 99.7 2.3E-16 4.9E-21 175.8 14.4 137 769-908 5-148 (337)
363 cd05576 STKc_RPK118_like Catal 99.7 1.5E-16 3.4E-21 167.7 12.4 120 780-908 4-125 (237)
364 cd06614 STKc_PAK Catalytic dom 99.7 2.7E-16 5.8E-21 170.8 14.4 136 768-908 18-156 (286)
365 PRK10345 hypothetical protein; 99.7 2.6E-16 5.5E-21 160.4 13.1 123 774-904 7-141 (210)
366 cd06616 PKc_MKK4 Catalytic dom 99.7 1.7E-16 3.6E-21 172.6 12.5 139 767-908 2-148 (288)
367 cd06657 STKc_PAK4 Catalytic do 99.7 1.6E-16 3.6E-21 173.1 12.4 132 773-908 24-156 (292)
368 cd07852 STKc_MAPK15 Catalytic 99.7 1.6E-16 3.4E-21 177.1 12.1 139 768-908 6-147 (337)
369 cd07854 STKc_MAPK4_6 Catalytic 99.7 2.9E-16 6.3E-21 175.2 14.1 132 769-905 5-151 (342)
370 cd07835 STKc_CDK1_like Catalyt 99.7 3E-16 6.5E-21 170.1 13.7 135 771-908 1-139 (283)
371 cd07866 STKc_BUR1 Catalytic do 99.7 3.2E-16 6.9E-21 172.3 14.0 139 767-908 6-155 (311)
372 cd06618 PKc_MKK7 Catalytic dom 99.7 4.2E-16 9.2E-21 170.2 14.8 141 765-908 11-155 (296)
373 KOG0587 Traf2- and Nck-interac 99.7 4.3E-16 9.2E-21 177.8 14.8 136 769-908 19-163 (953)
374 PTZ00024 cyclin-dependent prot 99.7 3.1E-16 6.6E-21 174.6 13.4 137 770-908 9-159 (335)
375 cd07851 STKc_p38 Catalytic dom 99.7 3.2E-16 6.8E-21 175.0 13.6 138 768-908 14-158 (343)
376 cd07867 STKc_CDC2L6 Catalytic 99.7 5.2E-16 1.1E-20 171.2 14.4 121 775-902 7-142 (317)
377 cd05043 PTK_Ryk Pseudokinase d 99.7 7.4E-16 1.6E-20 166.8 15.2 140 766-908 3-157 (280)
378 cd07834 STKc_MAPK Catalytic do 99.7 3.3E-16 7.2E-21 173.9 12.8 136 770-908 1-143 (330)
379 KOG1345 Serine/threonine kinas 99.7 8.1E-17 1.8E-21 160.2 6.6 139 761-903 15-156 (378)
380 cd08216 PK_STRAD Pseudokinase 99.7 5.9E-16 1.3E-20 170.6 14.3 126 781-908 12-141 (314)
381 cd07838 STKc_CDK4_6_like Catal 99.7 8.9E-16 1.9E-20 166.6 15.5 136 771-908 1-147 (287)
382 cd07830 STKc_MAK_like Catalyti 99.7 5.6E-16 1.2E-20 167.9 13.7 135 771-908 1-139 (283)
383 cd08528 STKc_Nek10 Catalytic d 99.7 5.4E-16 1.2E-20 166.7 13.4 139 770-908 1-154 (269)
384 cd05058 PTKc_Met_Ron Catalytic 99.7 6.5E-16 1.4E-20 165.4 13.8 131 775-908 1-138 (262)
385 KOG0669 Cyclin T-dependent kin 99.7 4.8E-18 1E-22 167.0 -2.6 138 768-908 16-164 (376)
386 cd06634 STKc_TAO2 Catalytic do 99.7 5.4E-16 1.2E-20 170.4 13.3 138 769-908 15-155 (308)
387 KOG1006 Mitogen-activated prot 99.7 2.4E-17 5.3E-22 163.5 2.1 144 762-908 57-208 (361)
388 cd05118 STKc_CMGC Catalytic do 99.7 5.6E-16 1.2E-20 167.8 12.9 135 771-908 1-138 (283)
389 cd07829 STKc_CDK_like Catalyti 99.7 5E-16 1.1E-20 168.1 12.4 135 771-908 1-138 (282)
390 cd05145 RIO1_like RIO kinase f 99.7 5.9E-16 1.3E-20 157.0 12.1 129 774-907 2-156 (190)
391 KOG1094 Discoidin domain recep 99.7 1.8E-16 3.9E-21 172.6 8.6 143 762-908 531-677 (807)
392 cd05074 PTKc_Tyro3 Catalytic d 99.7 7.5E-16 1.6E-20 165.9 13.4 136 771-908 1-153 (273)
393 cd07879 STKc_p38delta_MAPK13 C 99.6 1.1E-15 2.3E-20 170.7 14.3 137 769-908 15-157 (342)
394 KOG4721 Serine/threonine prote 99.6 2E-16 4.3E-21 171.4 7.8 131 765-908 120-252 (904)
395 cd05044 PTKc_c-ros Catalytic d 99.6 7.8E-16 1.7E-20 165.4 12.0 127 776-905 2-143 (269)
396 KOG1151 Tousled-like protein k 99.6 1.1E-16 2.5E-21 168.3 4.4 146 757-903 449-605 (775)
397 KOG1026 Nerve growth factor re 99.6 4.4E-16 9.6E-21 178.7 9.6 143 763-908 480-643 (774)
398 KOG1165 Casein kinase (serine/ 99.6 1E-15 2.2E-20 156.7 10.8 131 769-905 28-161 (449)
399 KOG0671 LAMMER dual specificit 99.6 7.1E-16 1.5E-20 161.2 9.5 136 767-907 87-231 (415)
400 KOG0596 Dual specificity; seri 99.6 6.9E-16 1.5E-20 167.6 9.6 139 761-902 353-494 (677)
401 cd08222 STKc_Nek11 Catalytic d 99.6 2E-15 4.3E-20 161.4 12.6 133 770-903 1-141 (260)
402 KOG0603 Ribosomal protein S6 k 99.6 5.8E-16 1.3E-20 172.3 8.6 135 767-908 320-456 (612)
403 smart00331 PP2C_SIG Sigma fact 99.6 3.5E-14 7.6E-19 144.6 20.2 175 111-366 14-192 (193)
404 KOG2052 Activin A type IB rece 99.6 2.8E-15 6.1E-20 159.3 11.8 131 769-907 211-355 (513)
405 PHA02882 putative serine/threo 99.6 6.3E-15 1.4E-19 160.8 14.9 141 766-908 9-166 (294)
406 KOG0664 Nemo-like MAPK-related 99.6 1.3E-16 2.9E-21 158.4 0.6 137 769-908 53-196 (449)
407 KOG1095 Protein tyrosine kinas 99.6 5.1E-15 1.1E-19 176.3 13.7 143 763-908 686-842 (1025)
408 KOG3653 Transforming growth fa 99.6 3.4E-15 7.4E-20 159.8 10.8 134 766-907 207-355 (534)
409 KOG0576 Mitogen-activated prot 99.6 2.8E-16 6.2E-21 173.8 1.7 138 767-908 13-152 (829)
410 KOG1167 Serine/threonine prote 99.6 1.4E-15 3.1E-20 161.2 6.7 130 768-903 35-167 (418)
411 PLN03225 Serine/threonine-prot 99.6 7.4E-15 1.6E-19 172.8 13.1 135 766-908 129-296 (566)
412 PLN00113 leucine-rich repeat r 99.6 5.3E-15 1.1E-19 188.1 12.7 130 769-907 690-822 (968)
413 PLN03224 probable serine/threo 99.6 1.1E-14 2.4E-19 167.0 13.8 144 765-908 141-349 (507)
414 PRK10359 lipopolysaccharide co 99.6 1.6E-14 3.4E-19 147.6 12.6 130 767-905 29-172 (232)
415 KOG0196 Tyrosine kinase, EPH ( 99.6 4.9E-15 1.1E-19 166.7 8.8 141 765-908 625-771 (996)
416 KOG2968 Predicted esterase of 99.6 5.6E-15 1.2E-19 167.0 9.0 209 502-739 392-604 (1158)
417 smart00090 RIO RIO-like kinase 99.6 1.3E-14 2.8E-19 151.7 10.9 133 770-907 29-187 (237)
418 KOG4278 Protein tyrosine kinas 99.6 6.5E-15 1.4E-19 160.9 8.6 137 767-908 265-405 (1157)
419 smart00221 STYKc Protein kinas 99.5 5.3E-14 1.1E-18 146.4 14.9 134 771-907 1-137 (225)
420 KOG1113 cAMP-dependent protein 99.5 2.8E-14 6E-19 147.6 11.7 139 563-731 88-228 (368)
421 cd00180 PKc Catalytic domain o 99.5 8.7E-14 1.9E-18 142.5 15.0 128 777-907 1-132 (215)
422 PRK12274 serine/threonine prot 99.5 6.1E-14 1.3E-18 140.1 13.0 126 772-908 5-132 (218)
423 KOG1164 Casein kinase (serine/ 99.5 5.8E-14 1.3E-18 154.8 13.7 132 770-905 19-159 (322)
424 PRK09392 ftrB transcriptional 99.5 1.7E-13 3.7E-18 144.3 16.0 120 472-597 6-125 (236)
425 KOG4257 Focal adhesion tyrosin 99.5 7.6E-14 1.6E-18 153.2 9.8 134 771-908 391-531 (974)
426 KOG0670 U4/U6-associated splic 99.5 9.7E-14 2.1E-18 149.6 10.2 144 758-906 416-574 (752)
427 KOG0614 cGMP-dependent protein 99.5 3.6E-14 7.8E-19 152.5 6.4 151 438-593 232-389 (732)
428 KOG0199 ACK and related non-re 99.5 3.3E-14 7.2E-19 157.9 5.7 139 766-908 107-252 (1039)
429 KOG0665 Jun-N-terminal kinase 99.5 5.2E-14 1.1E-18 144.1 5.9 137 768-908 16-158 (369)
430 PRK14879 serine/threonine prot 99.5 3.2E-13 6.8E-18 139.7 11.8 126 775-906 2-132 (211)
431 smart00220 S_TKc Serine/Threon 99.5 4.3E-13 9.2E-18 141.0 12.7 125 781-908 1-127 (244)
432 TIGR02865 spore_II_E stage II 99.4 5.5E-12 1.2E-16 152.1 23.4 207 88-386 545-763 (764)
433 cd00038 CAP_ED effector domain 99.4 1.1E-12 2.4E-17 120.5 13.1 112 480-596 1-112 (115)
434 PRK11753 DNA-binding transcrip 99.4 2.5E-12 5.4E-17 132.9 15.3 110 482-596 6-116 (211)
435 KOG1027 Serine/threonine prote 99.4 2.8E-13 6.1E-18 154.4 8.5 121 774-903 514-641 (903)
436 TIGR03724 arch_bud32 Kae1-asso 99.4 8.8E-13 1.9E-17 135.0 11.0 123 776-907 1-128 (199)
437 cd05144 RIO2_C RIO kinase fami 99.4 7.1E-13 1.5E-17 135.5 9.8 128 771-908 17-165 (198)
438 KOG1025 Epidermal growth facto 99.4 2.6E-13 5.5E-18 153.5 6.3 136 769-908 696-838 (1177)
439 PF00027 cNMP_binding: Cyclic 99.4 1.5E-12 3.3E-17 114.7 9.7 91 498-593 1-91 (91)
440 PRK09605 bifunctional UGMP fam 99.4 2.2E-12 4.8E-17 152.1 12.5 127 771-907 335-466 (535)
441 cd05119 RIO RIO kinase family, 99.4 2.2E-12 4.9E-17 130.5 9.7 128 774-907 2-153 (187)
442 KOG1166 Mitotic checkpoint ser 99.3 2.5E-12 5.5E-17 153.6 11.0 135 762-903 691-829 (974)
443 PRK11161 fumarate/nitrate redu 99.3 1.2E-11 2.7E-16 130.1 14.3 117 475-597 15-132 (235)
444 PRK10402 DNA-binding transcrip 99.3 1.1E-11 2.4E-16 129.3 13.8 117 471-596 10-126 (226)
445 PLN03192 Voltage-dependent pot 99.3 1.2E-11 2.6E-16 152.9 16.3 121 470-596 371-491 (823)
446 smart00100 cNMP Cyclic nucleot 99.3 2E-11 4.4E-16 112.9 13.6 111 480-595 1-113 (120)
447 COG0664 Crp cAMP-binding prote 99.3 1.6E-11 3.6E-16 126.8 13.6 114 476-594 3-116 (214)
448 COG0515 SPS1 Serine/threonine 99.3 2.5E-11 5.4E-16 133.4 15.7 132 771-905 2-138 (384)
449 PRK01723 3-deoxy-D-manno-octul 99.3 1.3E-11 2.8E-16 129.4 12.6 126 775-907 37-181 (239)
450 KOG0200 Fibroblast/platelet-de 99.3 1.3E-11 2.7E-16 147.0 12.5 140 767-908 294-458 (609)
451 PLN02868 acyl-CoA thioesterase 99.3 4.6E-11 1E-15 135.8 16.3 115 469-591 4-118 (413)
452 cd05120 APH_ChoK_like Aminogly 99.3 1.8E-11 3.8E-16 118.8 10.6 123 773-907 2-128 (155)
453 PRK09392 ftrB transcriptional 99.3 1.3E-11 2.8E-16 129.9 10.0 120 597-738 5-124 (236)
454 PF07228 SpoIIE: Stage II spor 99.3 4.9E-10 1.1E-14 114.0 21.2 181 128-387 2-193 (193)
455 KOG0498 K+-channel ERG and rel 99.2 2.4E-11 5.2E-16 141.3 10.9 119 471-595 417-537 (727)
456 PF00027 cNMP_binding: Cyclic 99.2 1.6E-11 3.4E-16 108.1 6.4 90 624-734 1-90 (91)
457 cd00038 CAP_ED effector domain 99.2 8.1E-11 1.8E-15 108.0 9.2 111 606-737 1-111 (115)
458 KOG0603 Ribosomal protein S6 k 99.2 5.2E-12 1.1E-16 141.2 0.2 132 776-908 1-137 (612)
459 COG2905 Predicted signal-trans 99.1 2.3E-10 4.9E-15 125.8 11.8 119 471-598 5-123 (610)
460 PLN03192 Voltage-dependent pot 99.1 1.7E-10 3.8E-15 142.7 11.8 117 597-735 372-488 (823)
461 PRK11753 DNA-binding transcrip 99.1 2E-10 4.3E-15 118.8 9.7 110 608-738 6-116 (211)
462 PRK09391 fixK transcriptional 99.1 6.8E-10 1.5E-14 116.1 13.4 98 492-597 34-131 (230)
463 KOG0500 Cyclic nucleotide-gate 99.1 3E-10 6.5E-15 122.4 9.5 119 596-738 304-428 (536)
464 TIGR03697 NtcA_cyano global ni 99.1 7.1E-10 1.5E-14 112.8 11.3 89 504-597 1-91 (193)
465 smart00100 cNMP Cyclic nucleot 99.1 3.5E-10 7.5E-15 104.5 7.9 113 606-739 1-115 (120)
466 COG0664 Crp cAMP-binding prote 99.1 4.4E-10 9.6E-15 116.1 9.5 108 604-732 5-112 (214)
467 KOG0498 K+-channel ERG and rel 99.0 3E-10 6.5E-15 132.3 7.5 120 597-738 417-538 (727)
468 PRK13918 CRP/FNR family transc 99.0 1.6E-09 3.5E-14 111.1 11.8 84 495-584 5-90 (202)
469 PLN02868 acyl-CoA thioesterase 99.0 1.6E-09 3.4E-14 123.4 12.8 114 597-734 6-119 (413)
470 PRK10402 DNA-binding transcrip 99.0 9.1E-10 2E-14 114.9 9.0 101 617-738 26-126 (226)
471 KOG3542 cAMP-regulated guanine 99.0 4.4E-09 9.4E-14 115.9 13.3 257 458-740 22-398 (1283)
472 KOG0500 Cyclic nucleotide-gate 99.0 3.4E-09 7.4E-14 114.5 11.7 124 467-598 301-430 (536)
473 KOG4158 BRPK/PTEN-induced prot 99.0 3.7E-10 8E-15 118.8 4.0 146 756-902 144-375 (598)
474 PRK04750 ubiB putative ubiquin 99.0 6.9E-10 1.5E-14 127.9 6.2 127 768-905 119-297 (537)
475 KOG2968 Predicted esterase of 98.9 1E-08 2.2E-13 117.4 15.2 225 492-736 111-485 (1158)
476 KOG0590 Checkpoint kinase and 98.9 5.4E-10 1.2E-14 131.4 4.1 135 772-908 321-460 (601)
477 PRK11161 fumarate/nitrate redu 98.9 3.2E-09 6.9E-14 111.7 9.1 115 602-738 16-131 (235)
478 cd05151 ChoK Choline Kinase (C 98.9 4.7E-09 1E-13 104.3 8.9 116 774-903 3-123 (170)
479 PF14531 Kinase-like: Kinase-l 98.9 6.6E-09 1.4E-13 109.8 10.3 137 770-907 13-184 (288)
480 TIGR01982 UbiB 2-polyprenylphe 98.9 5.2E-09 1.1E-13 119.4 9.8 127 775-907 123-296 (437)
481 KOG0499 Cyclic nucleotide-gate 98.9 2.7E-09 5.8E-14 116.7 6.9 114 599-735 527-643 (815)
482 PLN00181 protein SPA1-RELATED; 98.8 1.3E-09 2.8E-14 135.2 4.0 77 830-907 33-119 (793)
483 KOG1024 Receptor-like protein 98.8 4.6E-09 1E-13 110.4 6.3 138 768-908 283-436 (563)
484 COG2905 Predicted signal-trans 98.8 1.1E-08 2.4E-13 112.8 8.3 114 599-737 7-120 (610)
485 PRK13918 CRP/FNR family transc 98.8 1.7E-08 3.7E-13 103.5 9.2 84 621-726 5-90 (202)
486 cd05146 RIO3_euk RIO kinase fa 98.8 4.7E-08 1E-12 98.0 11.7 125 775-903 3-160 (197)
487 KOG0499 Cyclic nucleotide-gate 98.8 2.3E-08 5E-13 109.6 9.7 115 473-594 527-644 (815)
488 TIGR03697 NtcA_cyano global ni 98.7 1.4E-08 3E-13 103.3 6.2 88 630-738 1-90 (193)
489 KOG1240 Protein kinase contain 98.7 8.4E-09 1.8E-13 121.5 2.2 130 770-904 24-156 (1431)
490 PRK09391 fixK transcriptional 98.7 4.2E-08 9.2E-13 102.6 7.3 98 618-739 34-131 (230)
491 KOG3087 Serine/threonine prote 98.5 8E-07 1.7E-11 85.4 11.7 131 773-906 11-151 (229)
492 cd05154 ACAD10_11_like Acyl-Co 98.5 5.2E-07 1.1E-11 93.7 11.1 109 775-886 4-117 (223)
493 KOG0606 Microtubule-associated 98.5 9.3E-08 2E-12 112.9 4.9 105 763-908 77-183 (1205)
494 COG3642 Mn2+-dependent serine/ 98.4 1.9E-06 4E-11 83.5 9.8 123 775-905 2-129 (204)
495 KOG0590 Checkpoint kinase and 98.3 8E-08 1.7E-12 113.3 -1.1 140 767-907 18-164 (601)
496 KOG0601 Cyclin-dependent kinas 98.3 4.6E-07 1E-11 102.1 4.6 141 764-905 260-403 (524)
497 KOG0195 Integrin-linked kinase 98.2 4.5E-07 9.8E-12 91.2 1.6 146 758-907 179-330 (448)
498 PF01163 RIO1: RIO1 family; I 98.2 9.8E-06 2.1E-10 81.1 10.3 117 784-905 1-144 (188)
499 PRK15123 lipopolysaccharide co 98.2 2.3E-05 5E-10 83.3 13.7 89 815-903 74-173 (268)
500 PF06293 Kdo: Lipopolysacchari 98.0 5.8E-05 1.3E-09 77.4 12.4 93 813-905 55-155 (206)
No 1
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-67 Score=555.98 Aligned_cols=420 Identities=29% Similarity=0.455 Sum_probs=382.8
Q ss_pred ccCcccccCCHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEecccc
Q 002560 455 VPSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEK 534 (908)
Q Consensus 455 ~~~~~~~~k~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g 534 (908)
..+.+.+.|+....+.|.+++..+.|+++|+..++++++.+|...+|++|+.||+|||+++.+|++.+|++.|.....
T Consensus 136 ~~~l~~~~Kd~~~k~lI~dAi~~NdFLknLd~~Qi~e~v~~Myp~~~~~gs~IIrege~Gs~~yV~aeG~~~V~~~g~-- 213 (732)
T KOG0614|consen 136 SITLPRYNKDVGAKQLIRDAIQKNDFLKNLDASQIKELVDCMYPVEYRAGSWIIREGEPGSHLYVSAEGELQVSREGK-- 213 (732)
T ss_pred ccccccccCCccHHHHHHHHHHhhHHHHhhhHHHHHHHHHhhCcccccCCcEEEecCCCCceEEEeecceEEEeeCCe--
Confidence 356777889999999999999999999999999999999999999999999999999999999999999999986532
Q ss_pred CcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhh--HHHHHHhhhchhhccCCH
Q 002560 535 NGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN--LSSLKLLRSVDLLSRLTI 612 (908)
Q Consensus 535 ~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~--~~~~~~l~~~~~l~~l~~ 612 (908)
+ +.++++|..|||++++++++|+|+|+|+++|.+|.|+|+.|+.+|+..... .++++||+++++|++++.
T Consensus 214 ------l--l~~m~~gtvFGELAILynctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~E 285 (732)
T KOG0614|consen 214 ------L--LGKMGAGTVFGELAILYNCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPE 285 (732)
T ss_pred ------e--eeccCCchhhhHHHHHhCCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCH
Confidence 2 345588999999999999999999999999999999999999999987654 468899999999999999
Q ss_pred HHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCC
Q 002560 613 LQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEG 692 (908)
Q Consensus 613 ~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G 692 (908)
+.+.++++.|+...|..|+.|++||+.+++||||.+|.|+|++... .......+..+++|
T Consensus 286 e~L~KiaD~le~~~Yd~g~yIirqge~G~~ffii~~G~V~vtq~~e--------------------~~~q~~~lr~l~kG 345 (732)
T KOG0614|consen 286 ELLLKIADVLEEEYYDAGEYIIRQGEKGDTFFIISKGTVKVTQQDE--------------------GSTQPQELRTLNKG 345 (732)
T ss_pred HHHHHHHHHHHHHhhcCCceEEeecCCCCeEEEEecceEEEeecCC--------------------CCCchhHHhhcccc
Confidence 9999999999999999999999999999999999999999998776 22456789999999
Q ss_pred CeechhhhcccCcccceEeecCc-eEEEEecccccccccCccccccccccCCcccCCCCCCCCCccccccccccccccce
Q 002560 693 SYFGEWTLLGEHMGSLTAVAVDD-VVCAILTKEKFDLVVGPLTKISHDDQNSKDYSSDIPKKPAKSIDISSLAKVSLTDM 771 (908)
Q Consensus 693 ~~FGe~all~~~~r~~tv~a~~~-~~~~~i~~~~f~~llg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (908)
|||||.||++...|+|+|+|..+ ++|+.|+|+.|.+++|.+.++..++.....+. .+......-...+..+.++++
T Consensus 346 d~FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~l~~l~ek~~~D~~r~---A~~~~~~~~~~e~a~v~l~dl 422 (732)
T KOG0614|consen 346 DYFGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGDLEELKEKDYGDEERR---ASVVIKEDFAEEFAQVKLSDL 422 (732)
T ss_pred chhhHHHhhccCccchhhhccCCCceEEEecHHHHHHhcccHHHhhhhhccchhhh---hhhHHHHHHHhhhcccchhhh
Confidence 99999999999999999999985 99999999999999999999987665443321 000001122447888999999
Q ss_pred EEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+++..||-|+||.|-+|........+|+|+++|..+.+..+.+++..|.+||..++ +|+|+++|.+|.++.++||+||.
T Consensus 423 ~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~-s~fIvrLYrTfrd~kyvYmLmEa 501 (732)
T KOG0614|consen 423 KRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR-SDFIVRLYRTFRDSKYVYMLMEA 501 (732)
T ss_pred hhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC-chHHHHHHHHhccchhhhhhHHh
Confidence 99999999999999999987776689999999999999999999999999999985 99999999999999999999999
Q ss_pred CCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.||.|+..|+ +.|++.++++|++++++|++|||++|||+|||||+|+|+|.+|++|
T Consensus 502 ClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~K 560 (732)
T KOG0614|consen 502 CLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLK 560 (732)
T ss_pred hcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceE
Confidence 99999999998 8999999999999999999999999999999999999999999987
No 2
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=1.3e-44 Score=394.98 Aligned_cols=250 Identities=29% Similarity=0.490 Sum_probs=210.1
Q ss_pred eeEEEEEEecccCCCCCCCCCCcceEEEecCCC--------CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCc
Q 002560 93 YELRYSFLSQRGYYPDALDKANQDSFCIHTPFG--------TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKF 164 (908)
Q Consensus 93 ~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~--------~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~ 164 (908)
+.++++.+|++| .|+.|||++++..++. ...+..||||||||| |+.|++++++.|++.+.+....
T Consensus 63 ~~~~~~~~s~~G-----~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~ 135 (365)
T PLN03145 63 PVVRSGAWADIG-----SRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDF 135 (365)
T ss_pred CceEEEEEcccc-----CCCCCCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhcc
Confidence 357899999999 6999999998765431 123468999999999 8899999999999988776555
Q ss_pred chhHHHHHHHHHHHHHHHHHhccC--CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChh
Q 002560 165 HEDAVDACHSSYLTTNSQLHADVL--DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFRED 242 (908)
Q Consensus 165 ~~~~~~~l~~~~~~~~~~i~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~ 242 (908)
..++.++|.++|..+|..+.+... ....||||++++++.++++|||||||||||+++++. +.+||.||+|.++.
T Consensus 136 ~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~----~~~LT~DH~~~~~~ 211 (365)
T PLN03145 136 PREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGK----AIEMSRDHKPMCSK 211 (365)
T ss_pred chhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCe----EEEecCCCCCCCHH
Confidence 567788999999999999876422 123489999999999999999999999999999764 78899999999999
Q ss_pred HHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccC------CccccceE
Q 002560 243 ELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETI------GVVANPEI 316 (908)
Q Consensus 243 E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~------~v~~~Pdi 316 (908)
|++||++.||.|... + + +| .+++||+|||..+|.. +++++||+
T Consensus 212 E~~RI~~~Gg~v~~g-------------------------~--v-~g---~l~vTRalGD~~~k~~k~~~~~~vs~ePdv 260 (365)
T PLN03145 212 ERKRIEASGGYVYDG-------------------------Y--L-NG---QLNVARALGDWHMEGMKGSDGGPLSAEPEL 260 (365)
T ss_pred HHHHHHHcCCceecc-------------------------e--E-CC---ccccccccccccccccccccCCCcceEEEE
Confidence 999999999887410 0 0 11 2679999999876542 47899999
Q ss_pred EEEEeCCCCCEEEEEcCccccccChHHHHHHHh----ccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCC
Q 002560 317 VVWELTNDHPFFVLASDGVFEFLSSQAVVDMVA----KYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGL 389 (908)
Q Consensus 317 ~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~----~~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~ 389 (908)
..++++++|.|||||||||||+|+++++++++. ...+|+++|+.|+++|+.+ ++.||||||||+|+..
T Consensus 261 ~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~r-----gs~DNITvIVV~l~~~ 332 (365)
T PLN03145 261 MTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALKR-----KSGDNLAVVVVCFQSQ 332 (365)
T ss_pred EEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-----CCCCCEEEEEEEeecC
Confidence 999999999999999999999999999877654 3468999999999999987 8999999999999964
No 3
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-44 Score=349.16 Aligned_cols=256 Identities=27% Similarity=0.478 Sum_probs=219.0
Q ss_pred CCCeeEEEEEEecccCCCCCCCCCCcceEEEecCCC-CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcc---
Q 002560 90 SAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFG-TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH--- 165 (908)
Q Consensus 90 ~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~-~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~--- 165 (908)
...-.++||..|++|| |-.+||++.....+. .-.+|.||+|||||. |...|.+++++|.+.+..+..+.
T Consensus 17 G~GNglryg~SSMQGW-----R~eMEDah~A~~~l~~~l~dWSfFAVfDGHA--Gs~va~~c~~hLlehi~sse~F~~~~ 89 (379)
T KOG0697|consen 17 GEGNGLRYGVSSMQGW-----RVEMEDAHTAVAGLPSPLEDWSFFAVFDGHA--GSQVANHCAEHLLEHIISSEEFRGMT 89 (379)
T ss_pred CcCCceeeeeccccch-----hhhhhhhhhhhhcCCCCccCceEEEEEcCcc--chHHHHHHHHHHHHHhhhhHHHhhhc
Confidence 3344689999999997 778899987654433 357999999999999 88999999999999887654433
Q ss_pred -----hhHHHHHHHHHHHHHHHHHhc---cCCCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCC
Q 002560 166 -----EDAVDACHSSYLTTNSQLHAD---VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQT 237 (908)
Q Consensus 166 -----~~~~~~l~~~~~~~~~~i~~~---~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~ 237 (908)
++...-|+..|.++|..+... ......+||||+++++.+.++|++|+||||++++|++. +.--|+||+
T Consensus 90 k~gsv~~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~----~~f~TqDHK 165 (379)
T KOG0697|consen 90 KNGSVENVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGE----VVFSTQDHK 165 (379)
T ss_pred cCCcHHHHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCc----eEEeccCCC
Confidence 367788999999999887654 22234589999999999999999999999999999886 667899999
Q ss_pred CCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccC--------C
Q 002560 238 PFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETI--------G 309 (908)
Q Consensus 238 ~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~--------~ 309 (908)
|.+|.|++||+.+||.|+.. +.||. +++||||||..+|.. -
T Consensus 166 P~~p~EkeRIqnAGGSVMIq----------------------------RvNGs---LAVSRAlGDydyK~v~~kgp~eQl 214 (379)
T KOG0697|consen 166 PYLPKEKERIQNAGGSVMIQ----------------------------RVNGS---LAVSRALGDYDYKNVPGKGPTEQL 214 (379)
T ss_pred CCChHHHHHHhcCCCeEEEE----------------------------Eecce---eeeehhccCcccccCCCCCchhcc
Confidence 99999999999999999742 22333 899999999988753 3
Q ss_pred ccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHHhcc----CCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Q 002560 310 VVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY----KDPRDACAAIVAESYRLWLQYETRTDDITVIVVH 385 (908)
Q Consensus 310 v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~~~----~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~ 385 (908)
|+++|+|........|.||||||||+||+|+|+|+.+++++. .|+..+|...++..+-+ |+.||+|+|+|.
T Consensus 215 VSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~VvDtCLhK-----GSRDNMsivlvc 289 (379)
T KOG0697|consen 215 VSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDVVDTCLHK-----GSRDNMSIVLVC 289 (379)
T ss_pred cCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHHHHHHHhc-----cCccCceEEEEe
Confidence 899999999999999999999999999999999999999774 68899999999999986 999999999999
Q ss_pred cCCCCCc
Q 002560 386 INGLKNT 392 (908)
Q Consensus 386 ~~~~~~~ 392 (908)
|.+.|.+
T Consensus 290 fp~APkv 296 (379)
T KOG0697|consen 290 FPGAPKV 296 (379)
T ss_pred cCCCCCC
Confidence 9988753
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-42 Score=374.62 Aligned_cols=253 Identities=40% Similarity=0.607 Sum_probs=215.2
Q ss_pred EEEEecccCCCCCCCCCCcceEEEecCCC-----CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcch---hH
Q 002560 97 YSFLSQRGYYPDALDKANQDSFCIHTPFG-----TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHE---DA 168 (908)
Q Consensus 97 ~~~~s~~G~~~~~~r~~neD~~~~~~~~~-----~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~---~~ 168 (908)
.+.++.+| .|..+||.+.....+. ......||||||||| |..||+|+.++|+..+........ .+
T Consensus 42 ~~~~~~~~-----~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~~~~~~~ 114 (330)
T KOG0698|consen 42 GSLLSIRG-----RRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFPKDRQDV 114 (330)
T ss_pred eEEEecCC-----CCCccCcceeecccccccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhcccchHHH
Confidence 45568888 4667788877665532 223689999999999 999999999999999988766544 47
Q ss_pred HHHHHHHHH-HHHHHHHhccCCCCCCcceEEEEEEEC-CEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHH
Q 002560 169 VDACHSSYL-TTNSQLHADVLDDSMSGTTAVTVLVRG-RTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELER 246 (908)
Q Consensus 169 ~~~l~~~~~-~~~~~i~~~~~~~~~~GtT~~~~~i~~-~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~R 246 (908)
..+++++|. .+|..+.....+...+|||++++++.. ++|||||+|||||+|+++++ .+.+||.||+|.+++|++|
T Consensus 115 ~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~---~a~~Ls~DHkP~~~~E~~R 191 (330)
T KOG0698|consen 115 KDALRRAFLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGG---VAVQLSVDHKPDREDERER 191 (330)
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCC---eeeeCCCCCCCCcHHHHHH
Confidence 899999999 699999876333456799999988884 59999999999999998754 5899999999999999999
Q ss_pred HHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCC
Q 002560 247 VKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHP 326 (908)
Q Consensus 247 i~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~ 326 (908)
|+++||+|..... ++| .+| ++++||+|||..+|.++|+++||+....+++.|.
T Consensus 192 I~~~GG~v~~~~~---------------------~~R---v~G---~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~de 244 (330)
T KOG0698|consen 192 IEAAGGRVSNWGG---------------------VWR---VNG---VLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDE 244 (330)
T ss_pred HHHcCCEEEEcCC---------------------cce---Eec---eEEEeeecCCHHhcCCcEecCCceEEEEcCCCCc
Confidence 9999999974221 223 333 3999999999999988899999999999999999
Q ss_pred EEEEEcCccccccChHHHHHHHhc----cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCC
Q 002560 327 FFVLASDGVFEFLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKN 391 (908)
Q Consensus 327 flvlaSDGl~d~l~~~ei~~~v~~----~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~~ 391 (908)
|||||||||||+++++|++++|+. ..++..++..|...|..+ ++.||||||||+|.+...
T Consensus 245 FLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~-----~s~DnitvvvV~l~~~~~ 308 (330)
T KOG0698|consen 245 FLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSR-----GSKDNITVVVVRLKSSPK 308 (330)
T ss_pred EEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhc-----CCCCCeEEEEEEecCccc
Confidence 999999999999999999999988 568888999999999886 899999999999998754
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=4.6e-40 Score=359.99 Aligned_cols=244 Identities=25% Similarity=0.375 Sum_probs=202.3
Q ss_pred CCeeEEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHH
Q 002560 91 AKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVD 170 (908)
Q Consensus 91 ~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~ 170 (908)
.+..+.+++.|++| .|+.|||++++.. .+++.||||||||| |..||+++++.|...+...... ...+
T Consensus 18 ~~~~~~~g~~s~~G-----~R~~nED~~~v~~----~~~~~lfgVfDGHg--G~~~S~~~~~~l~~~l~~~~~~--~~~~ 84 (381)
T PTZ00224 18 GNSIFRCASACVNG-----YRESMEDAHLLYL----TDDWGFFGVFDGHV--NDECSQYLARAWPQALEKEPEP--MTDE 84 (381)
T ss_pred CCccEEEEEEeCCC-----CCCCCCCeeEecc----CCCceEEEEEeCCC--cHHHHHHHHHHHHHHHHhcccc--ccHH
Confidence 56788999999999 5899999987643 23557999999999 8889999999999887543321 1235
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCcceEEEEEEE-CCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHH
Q 002560 171 ACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR-GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKL 249 (908)
Q Consensus 171 ~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~-~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~ 249 (908)
.|+++|..+|..+.+... .+|||++++++. +++++||||||||+|++|++. +.+||.||++.++.|+.||.+
T Consensus 85 ~l~~a~~~~d~~i~~~~~---~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~----~~~LT~DH~~~~~~E~~RI~~ 157 (381)
T PTZ00224 85 RMEELCLEIDEEWMDSGR---EGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGK----LVFATEDHKPNNPGERQRIEA 157 (381)
T ss_pred HHHHHHHHHHHHHHhccc---CCCCeEEEEEEEECCEEEEEEcccceEEEEECCE----EEEcccCCCCCCHHHHhHHHH
Confidence 689999999999986543 359999998886 689999999999999999764 789999999999999999999
Q ss_pred cCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccC--------CccccceEEEEEe
Q 002560 250 SGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETI--------GVVANPEIVVWEL 321 (908)
Q Consensus 250 ~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~--------~v~~~Pdi~~~~l 321 (908)
.||.+.. .| ..+++++||+|||..+|.. +++++||+..+++
T Consensus 158 ~gg~v~~-------------------------~R------v~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l 206 (381)
T PTZ00224 158 CGGRVVS-------------------------NR------VDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTC 206 (381)
T ss_pred ccCEecc-------------------------cc------ccCceeeecccCCcccccccccccccCcceeeeEEEEEEC
Confidence 9987731 11 1122899999999765433 3679999999999
Q ss_pred CCCCCEEEEEcCcccc-ccChHHHHHHHhc----cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCC
Q 002560 322 TNDHPFFVLASDGVFE-FLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKN 391 (908)
Q Consensus 322 ~~~d~flvlaSDGl~d-~l~~~ei~~~v~~----~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~~ 391 (908)
.++| ||||||||||| +++++|+++++.. ..+++.+|+.|+++|+.+ |+.||||||||++...+.
T Consensus 207 ~~~D-~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~r-----Gs~DNITvIvV~~~~~~~ 275 (381)
T PTZ00224 207 QSND-FIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRR-----GSKDNISCLIVQLKDGAS 275 (381)
T ss_pred CCCC-EEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhc-----CCCCCEEEEEEEeeCCCC
Confidence 9877 68999999999 8999999999863 468999999999999987 899999999999987654
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-41 Score=352.83 Aligned_cols=245 Identities=29% Similarity=0.398 Sum_probs=206.7
Q ss_pred CCeeEEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcC--hHHHHHHHHHHHHHHHHhcCCcchh-
Q 002560 91 AKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF--GAQCSQFVKRKLCENLLRNNKFHED- 167 (908)
Q Consensus 91 ~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~--G~~as~~~~~~l~~~l~~~~~~~~~- 167 (908)
+...+.++..|+.|. .|.+|||++++..+..... ..||+|||||||| |+.||+.+++.|.+.+.+.......
T Consensus 4 ~~~~~~~~~~s~~g~----~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~ 78 (262)
T COG0631 4 GILSLKVAGLSDVGT----VRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNE 78 (262)
T ss_pred ccceeeeeeeccCCC----ccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccch
Confidence 345678899999995 7889999999877444344 7899999999977 7777777777777777664433322
Q ss_pred -HHHHHHHHHHHHHHHHHhccC---CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhH
Q 002560 168 -AVDACHSSYLTTNSQLHADVL---DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDE 243 (908)
Q Consensus 168 -~~~~l~~~~~~~~~~i~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E 243 (908)
..+.+.+++..+|..|..... +...||||++++++.++++|+|||||||+|++|++. .++||.||++.+..+
T Consensus 79 ~~~~~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~----~~~lT~DH~~~~~~~ 154 (262)
T COG0631 79 SLEELLKEAILKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGE----LKQLTEDHSLVNRLE 154 (262)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCc----eEEeccCCcHHHHHH
Confidence 678999999999999988743 446799999999999999999999999999999885 889999999998888
Q ss_pred HHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCC
Q 002560 244 LERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTN 323 (908)
Q Consensus 244 ~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~ 323 (908)
+.|+.. ++++..||.+ +++|||||+... .+|++...++++
T Consensus 155 ~~~~~~------------------------~~~~~~~~~~----------~~ltralG~~~~------~~p~~~~~~~~~ 194 (262)
T COG0631 155 QRGIIT------------------------PEEARSHPRR----------NALTRALGDFDL------LEPDITELELEP 194 (262)
T ss_pred HhcCCC------------------------HHHHHhCccc----------hhhhhhcCCCcc------cceeEEEEEcCC
Confidence 866552 3334455666 799999999843 799999999999
Q ss_pred CCCEEEEEcCccccccChHHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCC
Q 002560 324 DHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLK 390 (908)
Q Consensus 324 ~d~flvlaSDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~ 390 (908)
+ .|+|||||||||+++++++.+++....+++++++.|++.|+.+ ++.||||+|+|++....
T Consensus 195 ~-d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~-----g~~DNiT~ilv~~~~~~ 255 (262)
T COG0631 195 G-DFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALEG-----GGPDNITVVLVRLNGEG 255 (262)
T ss_pred C-CEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhc-----CCCCceEEEEEEeeccc
Confidence 9 6689999999999999999999998789999999999999996 89999999999998764
No 7
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=6.8e-41 Score=355.83 Aligned_cols=238 Identities=37% Similarity=0.588 Sum_probs=194.0
Q ss_pred EEEEecccCCCCCCCCCCcceEEEecCCC---CCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcc--hhHHHH
Q 002560 97 YSFLSQRGYYPDALDKANQDSFCIHTPFG---TSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH--EDAVDA 171 (908)
Q Consensus 97 ~~~~s~~G~~~~~~r~~neD~~~~~~~~~---~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~--~~~~~~ 171 (908)
+++.+..| .|+.|||++++..++. ...+..+|+|||||| |..||+++.+.|+..+....... .++.++
T Consensus 2 ~~~~~~~g-----~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhg--G~~~a~~~~~~l~~~l~~~~~~~~~~~~~~a 74 (254)
T PF00481_consen 2 YGVSSMQG-----VRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHG--GSEAAEYASQNLPEFLKENLSFNDGNDIEEA 74 (254)
T ss_dssp EEEEEEEC-----TSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cCeecCCC-----CCCcccCEEEEecCccccCCCCCcEEEEEecCCC--ChhhHHHHHHHHHHHHHhhcccccccchhhc
Confidence 67788888 6999999999887653 456789999999999 88999999999998776654322 267899
Q ss_pred HHHHHHH-HHHHHHhccC--CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHH
Q 002560 172 CHSSYLT-TNSQLHADVL--DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVK 248 (908)
Q Consensus 172 l~~~~~~-~~~~i~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~ 248 (908)
|..+|.. ++..+..... ....+||||+++++.++++|+|||||||||+++.+.. .++||.||+|.++.|+.||+
T Consensus 75 l~~a~~~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~---~~~Lt~dH~~~~~~E~~RI~ 151 (254)
T PF00481_consen 75 LRQAFLAFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGI---IKQLTRDHKPSNPDERERIR 151 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEE---EEESS---STTSHHHHHHHH
T ss_pred ccceeeecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeecccc---ccccccccccchhhccceee
Confidence 9999999 8888876311 4567899999999999999999999999999998762 25999999999999999999
Q ss_pred HcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCcccccc---CCccccceEEEEEeCCCC
Q 002560 249 LSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET---IGVVANPEIVVWELTNDH 325 (908)
Q Consensus 249 ~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~---~~v~~~Pdi~~~~l~~~d 325 (908)
++||.+... +..+|. +++||+|||..+|. ++|+++|++..++++++|
T Consensus 152 ~~gg~v~~~---------------------------~rv~g~---l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d 201 (254)
T PF00481_consen 152 KAGGRVSEN---------------------------GRVNGV---LAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDD 201 (254)
T ss_dssp HTT-GEEET---------------------------EEETTT---BSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTE
T ss_pred ccccccccc---------------------------hhhhhc---cccccccccccccccccceeeeecccccccccccc
Confidence 999988631 111222 79999999999998 789999999999999999
Q ss_pred CEEEEEcCccccccChHHHHHHHhccCC----HHHHHHHHHHHHHHHHHhcCCCCCCe
Q 002560 326 PFFVLASDGVFEFLSSQAVVDMVAKYKD----PRDACAAIVAESYRLWLQYETRTDDI 379 (908)
Q Consensus 326 ~flvlaSDGl~d~l~~~ei~~~v~~~~~----~~~~a~~Lv~~a~~~~~~~~g~~DNi 379 (908)
.|||||||||||+|+++|+++++.+..+ |+.+|+.|++.|+.+ |+.|||
T Consensus 202 ~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~-----gs~DNi 254 (254)
T PF00481_consen 202 EFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIAR-----GSKDNI 254 (254)
T ss_dssp EEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHT-----THHSHE
T ss_pred eEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhc-----CCCCCC
Confidence 9999999999999999999999987644 899999999999987 899997
No 8
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=326.51 Aligned_cols=253 Identities=34% Similarity=0.516 Sum_probs=233.7
Q ss_pred cCcccccCCHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccC
Q 002560 456 PSSSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKN 535 (908)
Q Consensus 456 ~~~~~~~k~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~ 535 (908)
-++...||+.+++..+.++++++.+|++|+++++..++++|..+.+++|+.|+.||+.++.||||.+|++.||+++.
T Consensus 105 ~~~~~~pKd~e~~~~L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeGd~fYvI~kGt~dVyv~~~--- 181 (368)
T KOG1113|consen 105 FKRKYIPKDDETRRRLEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEGDNFYVIDKGTFDVYVNGT--- 181 (368)
T ss_pred hhhcCCCCCHHHHHHHHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcCCcEEEEecceEEEEECCe---
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999998742
Q ss_pred cccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhH--HHHHHhhhchhhccCCHH
Q 002560 536 GEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNL--SSLKLLRSVDLLSRLTIL 613 (908)
Q Consensus 536 ~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~--~~~~~l~~~~~l~~l~~~ 613 (908)
.+ .+++||.+|||++|+++.||.|||.|.+++.+|.|++..|.++++.+.... .+..+|+++|+|.++...
T Consensus 182 -----~v--~~~~~g~sFGElALmyn~PRaATv~a~t~~klWgldr~SFrrIi~~s~~kkrkMy~~~l~s~pil~~l~k~ 254 (368)
T KOG1113|consen 182 -----YV--TTYSPGGSFGELALMYNPPRAATVVAKSLKKLWGLDRTSFRRIIMKSCIKKRKMYEPFLESVPILESLEKL 254 (368)
T ss_pred -----EE--eeeCCCCchhhhHhhhCCCcccceeeccccceEEEeeceeEEEeeccchhhhhhhhhhhhcchhhHHHHHH
Confidence 23 344889999999999999999999999999999999999999999876654 455899999999999999
Q ss_pred HHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCC
Q 002560 614 QLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGS 693 (908)
Q Consensus 614 ~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~ 693 (908)
++.++++.+..+.|++|+.|+.||++++.||+|.+|+|.+.+..+ .+.+ .++.||
T Consensus 255 er~kv~dal~~k~y~~G~~Vi~qg~~ge~f~~i~eGEvdv~~~~~------------------------~v~v-kl~~~d 309 (368)
T KOG1113|consen 255 ERAKVADALGTKSYKDGERVIVQGDQGEHFYIIEEGEVDVLKKRD------------------------GVEV-KLKKGD 309 (368)
T ss_pred HHHhhhcccceeeccCCceEEeccCCcceEEEecccccchhhccC------------------------CeEE-Eechhh
Confidence 999999999999999999999999999999999999999876554 2566 999999
Q ss_pred eechhhhcccCcccceEeecCceEEEEecccccccccCccccccccccCC
Q 002560 694 YFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHDDQNS 743 (908)
Q Consensus 694 ~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~~~~~ 743 (908)
||||.||+++.||.+||.|.++..|..++|..|++++||+.+++.++...
T Consensus 310 yfge~al~~~~pr~Atv~a~~~~kc~~~dk~~ferllgpc~dilkr~~~~ 359 (368)
T KOG1113|consen 310 YFGELALLKNLPRAATVVAKGRLKCAKLDKPRFERLLGPCQDILKRNRST 359 (368)
T ss_pred hcchHHHHhhchhhceeeccCCceeeeeChHHHHHHhhHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999999866533
No 9
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=324.08 Aligned_cols=230 Identities=28% Similarity=0.471 Sum_probs=186.5
Q ss_pred CCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhc------------C-C---------------
Q 002560 112 KANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRN------------N-K--------------- 163 (908)
Q Consensus 112 ~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~------------~-~--------------- 163 (908)
+.-||++.+... ...+|.|+||||||| |..||+|+.++|..++... . .
T Consensus 83 ~~~edrv~~~~s--~~~~~~fvGIyDGhg--Gp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~ 158 (390)
T KOG0700|consen 83 KAEEDRVSVAVS--EENGWLFVGIYDGHG--GPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQ 158 (390)
T ss_pred CcccCcceeeee--ccCCeEEEEEecCCC--CccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhc
Confidence 445787765442 357899999999999 9999999999999987621 1 1
Q ss_pred ------cchhHHHHHHHHHHHHHHHHHhc-------cCCCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcC-Ce-eE
Q 002560 164 ------FHEDAVDACHSSYLTTNSQLHAD-------VLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRG-KE-IV 228 (908)
Q Consensus 164 ------~~~~~~~~l~~~~~~~~~~i~~~-------~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~-~~-~~ 228 (908)
....+.++|.+||.+++..+... ...-+.|||||+++++.+..|||||+|||||+|++... .. +.
T Consensus 159 ~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~ 238 (390)
T KOG0700|consen 159 LSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLV 238 (390)
T ss_pred ccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEE
Confidence 14567899999999999998644 22335699999999999999999999999999987663 33 79
Q ss_pred EEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCc-cccccccCccccc-
Q 002560 229 AVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPG-TAFTRSIGDSIAE- 306 (908)
Q Consensus 229 ~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g-~~~tRs~Gd~~~~- 306 (908)
+.|||.||+.++++|+.||+..+ | .||..+....+++-| +.+||||||..+|
T Consensus 239 A~qLS~dHn~~ne~Ev~Rir~eH--------------P------------dd~~~vv~~~~RvkG~L~vsRAfGd~~lK~ 292 (390)
T KOG0700|consen 239 AVQLSTDHNASNEDEVRRIRSEH--------------P------------DDPHIVVNKHWRVKGILQVSRAFGDGYLKW 292 (390)
T ss_pred EEecChhhccccHHHHHHHHHhC--------------C------------CCcceEeeccceeeEEEEeeeeccceeecc
Confidence 99999999999999999999875 2 233333333335555 8999999998655
Q ss_pred -------------------cCCccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHHhcc----CCHHHHHHHHHH
Q 002560 307 -------------------TIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY----KDPRDACAAIVA 363 (908)
Q Consensus 307 -------------------~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~~~----~~~~~~a~~Lv~ 363 (908)
+|+++++|+|+.++|.|.|+|||||||||||+|+|+|++.+|..+ ..-+.+|+.|++
T Consensus 293 ~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr 372 (390)
T KOG0700|consen 293 PEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIR 372 (390)
T ss_pred hhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHH
Confidence 478999999999999999999999999999999999999999885 234568999999
Q ss_pred HHHHHHHh
Q 002560 364 ESYRLWLQ 371 (908)
Q Consensus 364 ~a~~~~~~ 371 (908)
.|+.+...
T Consensus 373 ~aL~~aak 380 (390)
T KOG0700|consen 373 HALGRAAK 380 (390)
T ss_pred HHHhhhhh
Confidence 99986433
No 10
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=6e-36 Score=344.69 Aligned_cols=254 Identities=20% Similarity=0.263 Sum_probs=193.8
Q ss_pred EEeeCCCeeEEEEEEecccCCCCCCCCCCcceEEEecCCC-----C---CCCcEEEEEecCCCcC--hHHHHHHHHHHHH
Q 002560 86 VKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFG-----T---SQDDHFFGVFDGHGEF--GAQCSQFVKRKLC 155 (908)
Q Consensus 86 ~~~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~-----~---~~~~~~~~V~DGhGg~--G~~as~~~~~~l~ 155 (908)
..+|-.-+.+.++++|++|. .|+.|||++.+..... . .....+|+|||||||+ |+.||+++++.|.
T Consensus 366 ~~lp~~l~~l~~a~~Td~G~----~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~ 441 (645)
T PRK14559 366 AVLPMQLVSLEDAGRTDVGR----QRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQ 441 (645)
T ss_pred ccccccceeEEEEEECCCCC----CCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHH
Confidence 33454556789999999994 6999999987754310 0 1245799999999997 9999999999999
Q ss_pred HHHHhcCCcchhHHHHHHHHHHHHHHHHHhccC-----CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEE
Q 002560 156 ENLLRNNKFHEDAVDACHSSYLTTNSQLHADVL-----DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAV 230 (908)
Q Consensus 156 ~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~-----~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~ 230 (908)
+.+...........+.++++|..+|..|.+... +...||||++++++.++++|+|||||||+|++++++ ...
T Consensus 442 ~~~~~~~~~~~~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g---~l~ 518 (645)
T PRK14559 442 QYFQQHWQDELPDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKG---GLE 518 (645)
T ss_pred HHHHhhhcccccHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCC---eEE
Confidence 887654322223356799999999999976421 234699999999999999999999999999986543 278
Q ss_pred eCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCc
Q 002560 231 DLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGV 310 (908)
Q Consensus 231 ~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v 310 (908)
+||.||++.. |+.+.| + +...+..+|.+ +++|||||+...+
T Consensus 519 QLT~DHs~~~-----~lv~~G--i------------------~~~~a~~~p~~----------~~LTrALG~~~~~---- 559 (645)
T PRK14559 519 QLTVDHEVGQ-----REIQRG--V------------------EPQIAYARPDA----------YQLTQALGPRDNS---- 559 (645)
T ss_pred EeCCCCCHHH-----HHHHhC--C------------------CHHHHhcCccc----------ceeeeccCCCCCC----
Confidence 9999998753 233333 1 11122334433 8999999986433
Q ss_pred cccceEEEEEeCCCCCEEEEEcCcccc--ccCh---HHHHHHHhccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Q 002560 311 VANPEIVVWELTNDHPFFVLASDGVFE--FLSS---QAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVH 385 (908)
Q Consensus 311 ~~~Pdi~~~~l~~~d~flvlaSDGl~d--~l~~---~ei~~~v~~~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~ 385 (908)
..+|++..++++++|. |||||||||| .+.+ +++..++....+++++|+.|++.|+.+ |++||||+|||+
T Consensus 560 ~l~Pdi~~~~L~~gD~-lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~Al~~-----gg~DNITvIvV~ 633 (645)
T PRK14559 560 AIQPDIQFLEIEEDTL-LLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLANQY-----NGHDNITAILVR 633 (645)
T ss_pred cccceEEEEEcCCCCE-EEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----CCCCcEEEEEEE
Confidence 2589999999998765 6999999999 4554 455667777778999999999999986 899999999999
Q ss_pred cCCCCC
Q 002560 386 INGLKN 391 (908)
Q Consensus 386 ~~~~~~ 391 (908)
+...+.
T Consensus 634 l~~~p~ 639 (645)
T PRK14559 634 LKVRPQ 639 (645)
T ss_pred eccCCC
Confidence 986654
No 11
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=300.60 Aligned_cols=163 Identities=34% Similarity=0.490 Sum_probs=136.9
Q ss_pred CcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCC
Q 002560 193 SGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWG 272 (908)
Q Consensus 193 ~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g 272 (908)
+||||+++++.+++|+|||.||||||++|.|. +.++|.||+|.+.-|..||.++||+|.-..
T Consensus 330 SGtTAvVcLv~g~~liVANAGDSRcV~sr~Gk----AvdmS~DHKPEDevE~~RI~~AGG~vtlDG-------------- 391 (542)
T KOG0699|consen 330 SGTTAVVCLVGGDKLIVANAGDSRCVLSRNGK----AVDMSVDHKPEDEVETNRIHAAGGQVTLDG-------------- 391 (542)
T ss_pred CCceEEEEEecCceEEEecCCCcceEEecCCc----eeecccCCCcccHHHHHHHHhcCCeEeecc--------------
Confidence 69999999999999999999999999999886 899999999999999999999999995321
Q ss_pred CCCCCCCCCCceeccCCCcCccccccccCcccccc--------CCccccceEEEEEeCCCCCEEEEEcCccccccChHHH
Q 002560 273 TEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET--------IGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAV 344 (908)
Q Consensus 273 ~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~--------~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei 344 (908)
+.-+|+.++|+|||..+|. ..|++-|||...-|+|.|.|+||||||+|++|+.+++
T Consensus 392 ----------------RVNGGLNLSRA~GDHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeV 455 (542)
T KOG0699|consen 392 ----------------RVNGGLNLSRAFGDHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEV 455 (542)
T ss_pred ----------------eecCccchhhhhhhhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHH
Confidence 1122589999999998764 4589999999999999999999999999999999999
Q ss_pred HHHHhc----cCCHHHHHHHHHHHHHHHHH-hcCCCCCCeEEEEEEcCCC
Q 002560 345 VDMVAK----YKDPRDACAAIVAESYRLWL-QYETRTDDITVIVVHINGL 389 (908)
Q Consensus 345 ~~~v~~----~~~~~~~a~~Lv~~a~~~~~-~~~g~~DNiTvivv~~~~~ 389 (908)
+++|+. ......+|..|....+.-.- ..+.+.||+|||++.|...
T Consensus 456 VdFvr~~l~~n~~ls~iceeL~D~CLAp~T~GDGTGCDNMT~ii~~Fkrk 505 (542)
T KOG0699|consen 456 VDFVRDLLAKNSSLSEICEELCDACLAPSTDGDGTGCDNMTVIITTFKRK 505 (542)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHhhcCCCCCCCCcCCCcceEEEEEeccc
Confidence 999865 34556666666666654210 1124689999999999854
No 12
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.5e-31 Score=283.83 Aligned_cols=239 Identities=39% Similarity=0.596 Sum_probs=197.6
Q ss_pred EEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcc----hhHHH
Q 002560 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFH----EDAVD 170 (908)
Q Consensus 95 ~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~----~~~~~ 170 (908)
+.++..+..| .|..|||++++.... ..+..+|+|||||| |+.+|+++++.+.+.+....... ..+..
T Consensus 6 ~~~~~~~~~~-----~r~~neD~~~~~~~~--~~~~~~~~v~DG~g--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (255)
T smart00332 6 LRYGLSSMQG-----VRKPMEDAHVITPDL--SDSGAFFGVFDGHG--GSEAAKFLSKNLPEILAEELIKHKDELEDVEE 76 (255)
T ss_pred eeEEEecCCC-----CCCCCcceEEEeccC--CCCeEEEEEEeCCC--cHHHHHHHHHHHHHHHHHhHhhcccchhHHHH
Confidence 4566666666 799999999886542 25678999999999 99999999999998887653322 25778
Q ss_pred HHHHHHHHHHHHHHhccCC---CCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHH
Q 002560 171 ACHSSYLTTNSQLHADVLD---DSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERV 247 (908)
Q Consensus 171 ~l~~~~~~~~~~i~~~~~~---~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri 247 (908)
.|++++..++..+...... ...+|||++++++.+++++++|+||||+|+++++. ..+||.||++.++.|..||
T Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~----~~~lt~dh~~~~~~~~~~i 152 (255)
T smart00332 77 ALRKAFLKTDEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGK----AVQLTEDHKPSNEDERARI 152 (255)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCc----eeEcCCCCCCcCHHHHHHH
Confidence 8999999999999876332 24689999999999999999999999999999765 5789999999999999999
Q ss_pred HHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEe-CCCCC
Q 002560 248 KLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWEL-TNDHP 326 (908)
Q Consensus 248 ~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l-~~~d~ 326 (908)
...++.+... .+|.+ +.+||++|+...+ ++++.+|++...++ .++|.
T Consensus 153 ~~~~~~~~~~---------------------~~~~~----------~~lt~~~g~~~~~-~~i~~~p~~~~~~~~~~~d~ 200 (255)
T smart00332 153 EAAGGFVING---------------------RVNGV----------LALSRAIGDFFLK-PYVSAEPDVTVVELTEKDDF 200 (255)
T ss_pred HHcCCEEECC---------------------eECCe----------EecccccCCHhhc-CCeEeeeEEEEEEecCCCcE
Confidence 9998866310 11222 7899999987665 45889999999997 66565
Q ss_pred EEEEEcCccccccChHHHHHHHhccC---CHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEE
Q 002560 327 FFVLASDGVFEFLSSQAVVDMVAKYK---DPRDACAAIVAESYRLWLQYETRTDDITVIVV 384 (908)
Q Consensus 327 flvlaSDGl~d~l~~~ei~~~v~~~~---~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv 384 (908)
||||||||||+++++++.+++.+.. ++..+|+.|++.|..+ +..||+|+|||
T Consensus 201 -ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~-----~~~Dn~T~ivv 255 (255)
T smart00332 201 -LILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALAR-----GSKDNITVIVV 255 (255)
T ss_pred -EEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHc-----CCCCCeEEEEC
Confidence 7999999999999999999998765 5999999999999885 88999999985
No 13
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2.3e-31 Score=283.98 Aligned_cols=242 Identities=38% Similarity=0.572 Sum_probs=193.3
Q ss_pred EEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcC--hHHHHHHHHHHHHHHHHhcCC-cchhHHHHHH
Q 002560 97 YSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF--GAQCSQFVKRKLCENLLRNNK-FHEDAVDACH 173 (908)
Q Consensus 97 ~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~--G~~as~~~~~~l~~~l~~~~~-~~~~~~~~l~ 173 (908)
++..+..| .|+.|||++++...... .++.+|+|||||||+ |..||+.+.+.+.+.+..... ....+...|+
T Consensus 3 ~~~~~~~g-----~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~ 76 (254)
T cd00143 3 AGVSDKGG-----DRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALR 76 (254)
T ss_pred eeeecCCC-----CCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHH
Confidence 45556666 68899999998653211 367899999999964 555566655555555433221 2456678899
Q ss_pred HHHHHHHHHHHhccC---CCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHc
Q 002560 174 SSYLTTNSQLHADVL---DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLS 250 (908)
Q Consensus 174 ~~~~~~~~~i~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~ 250 (908)
++|..+|..+..... ....+|||++++++.++.++++|+||||+|+++++. .+++|.||++.++.|..||...
T Consensus 77 ~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~----~~~lt~dh~~~~~~~~~~i~~~ 152 (254)
T cd00143 77 KAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGE----AVQLTKDHKPVNEEERERIEKA 152 (254)
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCc----eeEcCCCCCCcChHHHHHHHHc
Confidence 999999999987643 335689999999999999999999999999999875 6789999999999999999998
Q ss_pred CCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEe-CCCCCEEE
Q 002560 251 GARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWEL-TNDHPFFV 329 (908)
Q Consensus 251 gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l-~~~d~flv 329 (908)
++.+.. ..+|.+ +.+||+||+..++ +++..+|++...++ .++|. ||
T Consensus 153 ~~~~~~---------------------~~~~~~----------~~~t~~lG~~~~~-~~~~~~~~~~~~~l~~~~d~-il 199 (254)
T cd00143 153 GGRVSN---------------------GRVPGV----------LAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDF-LI 199 (254)
T ss_pred CCcEEe---------------------CEEcCc----------eeeccccCCcccc-CCEEcCCeEEEEEeCCCCcE-EE
Confidence 875420 011122 7899999998776 45789999999999 66665 79
Q ss_pred EEcCccccccChHHHHHHHhccC---CHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEc
Q 002560 330 LASDGVFEFLSSQAVVDMVAKYK---DPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386 (908)
Q Consensus 330 laSDGl~d~l~~~ei~~~v~~~~---~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~ 386 (908)
||||||||.++++++.+++.... +++++|+.|++.|..+ ++.||+|+|++++
T Consensus 200 l~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~-----~~~Dn~t~i~~~~ 254 (254)
T cd00143 200 LASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRR-----GSHDNITVVVVRL 254 (254)
T ss_pred EECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhC-----CCCCCEEEEEEeC
Confidence 99999999999999999998876 7999999999999886 7899999999975
No 14
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.96 E-value=3.8e-30 Score=258.00 Aligned_cols=142 Identities=32% Similarity=0.443 Sum_probs=139.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
.++++|++++.||.|+||.|.+|+++.++..||+|++++..+.+.++.+++.+|..+|+.+. ||++++++.+|.+.+++
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~-~PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS-HPFLVKLYGTFKDNSNL 119 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc-CceeEEEEEeeccCCeE
Confidence 68999999999999999999999999999999999999999999999999999999999996 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||||++||.|+.+++ ++|++..+++|++||+.||+|||+++|+||||||||||||++||+|
T Consensus 120 ymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iK 184 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIK 184 (355)
T ss_pred EEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEE
Confidence 99999999999999999 7999999999999999999999999999999999999999999987
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.96 E-value=5.7e-30 Score=266.25 Aligned_cols=143 Identities=23% Similarity=0.366 Sum_probs=138.6
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
....++|+++++||+|+||+||+|+.+++++.||||+++|..+...+..+++..|..||..++ ||+|++++..|++..+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~-hPFiv~l~ysFQt~~k 99 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK-HPFIVKLIYSFQTEEK 99 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC-CCcEeeeEEecccCCe
Confidence 678999999999999999999999999999999999999999998888999999999999985 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+|+||+.||+|+..|+ +.|++..+++|+++|+.||.|||++|||||||||||||||.+||++
T Consensus 100 LylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~ 165 (357)
T KOG0598|consen 100 LYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIK 165 (357)
T ss_pred EEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEE
Confidence 999999999999999998 8899999999999999999999999999999999999999999985
No 16
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.96 E-value=3.2e-29 Score=270.78 Aligned_cols=143 Identities=25% Similarity=0.392 Sum_probs=138.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+++++||++++.||+|+||.||+|+-+.||+.||||+++|+.....++.++++.|..+|... .+|+||++|..|++..+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~ 215 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEY 215 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCe
Confidence 45899999999999999999999999999999999999999999999999999999999996 69999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||++||++..+|. +.+++..+++|+++++.|++.||+.|+|||||||+|+|||..||+|
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiK 281 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIK 281 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEe
Confidence 999999999999999997 8899999999999999999999999999999999999999999997
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-29 Score=269.35 Aligned_cols=144 Identities=26% Similarity=0.358 Sum_probs=140.0
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.....||.+++.||.|+|++|++|+.+.+++.||+|++.|..+.++.....+..|..+|.+|++||.|+++|.+|+|...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 55789999999999999999999999999999999999999999999999999999999999889999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+|+||+++|+|.++|+ +.|++..+++|++||+.||+|||++|||||||||||||||.+|++|
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEE
Confidence 999999999999999998 8999999999999999999999999999999999999999999986
No 18
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.94 E-value=3.5e-27 Score=247.14 Aligned_cols=146 Identities=24% Similarity=0.380 Sum_probs=139.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 761 ~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+.-..+.+++|++++.||.|.-|.||+|+...++..+|||++.+..+...+...++..|.+||+.+ +||+++.+|..|+
T Consensus 69 ~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fe 147 (459)
T KOG0610|consen 69 SKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFE 147 (459)
T ss_pred cCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheee
Confidence 345568899999999999999999999999999999999999999988888899999999999999 5999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 841 DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
.+++.|++||||+||+|..+++ +.|++..+++|+++++.||+|||..|||+||||||||||-++|||
T Consensus 148 t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHI 218 (459)
T KOG0610|consen 148 TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHI 218 (459)
T ss_pred ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcE
Confidence 9999999999999999999987 679999999999999999999999999999999999999999997
No 19
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-26 Score=241.29 Aligned_cols=136 Identities=18% Similarity=0.224 Sum_probs=127.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+.+|.+.+.||+|+||.||+++++.++..+|||.+.+... ..+..+.+..|+++|+.++ ||||+.++++..+.+++|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~-H~nIV~l~d~~~~~~~i~ 85 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELK-HPNIVRLLDCIEDDDFIY 85 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcC-CcceeeEEEEEecCCeEE
Confidence 46889999999999999999999999999999999988764 3345677899999999996 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
+|||||.||+|..+|+ +.+++..++.++.||+.||++||+++||||||||+||||+..
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~ 145 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTT 145 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccC
Confidence 9999999999999998 789999999999999999999999999999999999999875
No 20
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=5.7e-26 Score=237.60 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=124.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhcc----chHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL----GKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~----~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
-+.|.+.+.||+|+||.|-++..+.|++.||||++++...... .....+.+|++||++|+ ||+|++++++|...+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~-HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS-HPNIVRIKDFFEVPD 249 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC-CCCEEEEeeeeecCC
Confidence 4558888999999999999999999999999999998876552 23455789999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
..||||||+.||+|++.+- +.+.+...+.+++|++.|+.|||++||+||||||+|||+..+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~ 312 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND 312 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC
Confidence 9999999999999999986 789999999999999999999999999999999999999876
No 21
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.7e-26 Score=252.31 Aligned_cols=145 Identities=22% Similarity=0.356 Sum_probs=139.7
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..+++++|.++++||+|+||+|+++..+.+++.||||+++|..+......+..+.|.+|+...+.||+++++|.+|+.+.
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 57899999999999999999999999999999999999999999888899999999999999988999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|+||||+.||++..+.+ +.|++..+++|+++|+.||+|||++||||||||.+|||+|.+||+|
T Consensus 443 ~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~k 508 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVK 508 (694)
T ss_pred eEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEE
Confidence 9999999999999777666 8999999999999999999999999999999999999999999997
No 22
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.93 E-value=2.1e-24 Score=217.09 Aligned_cols=216 Identities=26% Similarity=0.376 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHHHhccCC-CCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHH
Q 002560 168 AVDACHSSYLTTNSQLHADVLD-DSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELER 246 (908)
Q Consensus 168 ~~~~l~~~~~~~~~~i~~~~~~-~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~R 246 (908)
+..||+.||+.+|.+|...... .-..|||+++++.--++||+||+|||||++.|+++ .++||.+.||. .|++|
T Consensus 220 ViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrnde----irplS~efTPe--tERqR 293 (493)
T KOG1323|consen 220 VIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDE----IRPLSKEFTPE--TERQR 293 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCC----eeecccccCcH--HHHHH
Confidence 4679999999999999775322 23468999999999999999999999999999997 78899999884 57888
Q ss_pred HHHc--------CCEEeeecccccCC-----------CCCcccCCCCC--CCCCCCCceecc---CCCcCccccccccCc
Q 002560 247 VKLS--------GARVLTLDQIEGLK-----------NPDVQCWGTEE--GDDGDPPRLWVP---NGMYPGTAFTRSIGD 302 (908)
Q Consensus 247 i~~~--------gg~v~~~~~~~~~~-----------~~~~~~~g~~~--~~~~~~~r~~~~---~~~~~g~~~tRs~Gd 302 (908)
++.. |+.....+...++. +-....|..+. +.+-.++-+.-. .+.+.-+.+||.|||
T Consensus 294 lQ~Laf~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGD 373 (493)
T KOG1323|consen 294 LQELAFRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGD 373 (493)
T ss_pred HHHHhhcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCc
Confidence 8754 33333222222221 11122343221 111112221111 112333689999999
Q ss_pred ccccc--------CCccccceEEEEEeCC----CCCEEEEEcCccccccChHHHHHHHhcc------CCHH---HHHHHH
Q 002560 303 SIAET--------IGVVANPEIVVWELTN----DHPFFVLASDGVFEFLSSQAVVDMVAKY------KDPR---DACAAI 361 (908)
Q Consensus 303 ~~~~~--------~~v~~~Pdi~~~~l~~----~d~flvlaSDGl~d~l~~~ei~~~v~~~------~~~~---~~a~~L 361 (908)
..++. +..++.|+|++++|.. .|+.+|||||||||+++|+|+..+|.+. .||. .+|+.|
T Consensus 374 H~Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdl 453 (493)
T KOG1323|consen 374 HHLKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDL 453 (493)
T ss_pred ceeeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHH
Confidence 87653 4478999999999874 2456899999999999999999999764 2343 456677
Q ss_pred HHHHHHH-----HHhc---CCCCCCeEEEEEEcCCC
Q 002560 362 VAESYRL-----WLQY---ETRTDDITVIVVHINGL 389 (908)
Q Consensus 362 v~~a~~~-----~~~~---~g~~DNiTvivv~~~~~ 389 (908)
+..|... |.-. -|+.|||||.||-+..-
T Consensus 454 va~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~~ 489 (493)
T KOG1323|consen 454 VAAARGQQKDRGWRMNNGGLGSGDDISVFVIPLKYC 489 (493)
T ss_pred HHHhcCccCCCceeccCCCcCCCCceEEEEEeccCC
Confidence 7776532 3222 25789999999988654
No 23
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.92 E-value=5e-25 Score=229.50 Aligned_cols=142 Identities=20% Similarity=0.246 Sum_probs=131.2
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..+++++++.++.||+|..|+||+|+|+.|++.||+|++... .+....+++.+|+.+++.+ .||+|+.+|+.|..+.
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~ 150 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNG 150 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCC
Confidence 457888999999999999999999999999999999998432 2445678899999999998 5999999999999998
Q ss_pred e-EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 844 H-AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~-~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
. ++|+||||.+|+|.+++. +.++|.....++.++++||.|||+ ++||||||||+||||+.+|++|
T Consensus 151 ~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVK 219 (364)
T KOG0581|consen 151 EEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVK 219 (364)
T ss_pred ceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEE
Confidence 5 999999999999999998 889999999999999999999995 9999999999999999999987
No 24
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=1.2e-24 Score=239.34 Aligned_cols=139 Identities=20% Similarity=0.250 Sum_probs=135.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|+..+.||+|+|+.||.+++..+|+.||+|++.+..+.+..+.+.+.+|++|++.|+ ||||+++|.+|+|.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~-HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK-HPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC-CCcEEeeeeEeecCCceEEE
Confidence 66999999999999999999999999999999999999999999999999999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+|..++|..+++ +.++|.++++|+.||+.||.|||+++|||||||..|||++++-+||
T Consensus 97 LELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VK 158 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVK 158 (592)
T ss_pred EEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEE
Confidence 99999999999998 8899999999999999999999999999999999999999998876
No 25
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=3.1e-25 Score=216.70 Aligned_cols=148 Identities=22% Similarity=0.206 Sum_probs=140.0
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 760 ISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 760 ~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.......++++|++.+.||+|.||.||+++.+.++..+|+|++.|+.+...+...++.+|++|-..|+ ||||.++|++|
T Consensus 13 ~~~~~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~-hpnilrlY~~f 91 (281)
T KOG0580|consen 13 SRATKTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLR-HPNILRLYGYF 91 (281)
T ss_pred cccccccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccC-CccHHhhhhhe
Confidence 34456789999999999999999999999999999999999999999888888899999999999996 99999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 840 ADSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+...+|+++||...|+|+..|. .++++..+..|+.|++.||.|+|.+++|||||||+|+|++..|.+|
T Consensus 92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lk 164 (281)
T KOG0580|consen 92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELK 164 (281)
T ss_pred eccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCee
Confidence 99999999999999999999997 5799999999999999999999999999999999999999999876
No 26
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.91 E-value=4e-25 Score=229.09 Aligned_cols=139 Identities=19% Similarity=0.247 Sum_probs=134.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|++.+.||+|+||.|-++.....|+.||+|.++++.+.+....-++.+|++||..|+ ||||+.+|.+|++.+.+.||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN-HPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN-HPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC-CCceeehhhhhcCCceEEEE
Confidence 45999999999999999999999999999999999999999989999999999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||..+|+|++++. +.+++.+++.+++||+.|+.|+|.++++|||||.+|||+|.++++|
T Consensus 132 MEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiK 193 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIK 193 (668)
T ss_pred EEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCee
Confidence 99999999999998 8999999999999999999999999999999999999999999986
No 27
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=2e-24 Score=234.92 Aligned_cols=143 Identities=22% Similarity=0.343 Sum_probs=135.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+++-.-|..++.||-|+||+|.+|+..+|...||+|.+.|..+...++..++..|..||... ++++||++|..|+|+++
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdn 703 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDN 703 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCc
Confidence 34556688899999999999999999999999999999999988888999999999999997 59999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||+|++||++..+|- +.|+|..+++|++++..|+++.|..|+|||||||+|||||.+||+|
T Consensus 704 LYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIK 769 (1034)
T KOG0608|consen 704 LYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIK 769 (1034)
T ss_pred eEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCcee
Confidence 999999999999999886 8999999999999999999999999999999999999999999997
No 28
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=6.9e-25 Score=253.96 Aligned_cols=142 Identities=27% Similarity=0.367 Sum_probs=134.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
++-+||+++++||+|+||.|.+|+++.+++.||||+++|....+......|..|..+|..-+ +++|+.++..|+|.+++
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~n-s~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGN-SEWIVQLHYAFQDERYL 150 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCC-cHHHHHHHHHhcCccce
Confidence 46789999999999999999999999999999999999988777667778999999999864 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+|||||+||+|..+|. .++|+..+++|+++|+.||..||+.|+|||||||+|||||..||+|
T Consensus 151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHik 215 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIK 215 (1317)
T ss_pred EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEe
Confidence 99999999999999998 6799999999999999999999999999999999999999999987
No 29
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.90 E-value=2.5e-24 Score=216.51 Aligned_cols=139 Identities=11% Similarity=0.157 Sum_probs=122.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
|+.|+.+.++|+|+||.||+|+++.||+.||||.+.-+. .+....+-.++|+++|+++. |+|++.+..+|.....+++
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLk-H~NLVnLiEVFrrkrklhL 78 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLK-HENLVNLIEVFRRKRKLHL 78 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcc-cchHHHHHHHHHhcceeEE
Confidence 467899999999999999999999999999999986443 22334456789999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+|||+..-|..+-+ ..++...++.|+.|++.|+.|+|+++|||||||||||||+.+|.+|
T Consensus 79 VFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvK 141 (396)
T KOG0593|consen 79 VFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVK 141 (396)
T ss_pred EeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEE
Confidence 999997644444333 6799999999999999999999999999999999999999999876
No 30
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=8.5e-25 Score=221.04 Aligned_cols=145 Identities=21% Similarity=0.336 Sum_probs=138.5
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
-.++++++|..+++||+|.||+|.+|+.+.+++.||+|+++|..+.......+.+.|-++|+..+ ||++..+-..|+..
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~-HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR-HPFLTSLKYSFQTQ 240 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc-CcHHHHhhhhhccC
Confidence 34678999999999999999999999999999999999999998888888899999999999985 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+|+||||..||.|+-.|. ..|++..+++|.++|+.||.|||+++||+||||.+|+|+|.+||+|
T Consensus 241 drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIK 308 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIK 308 (516)
T ss_pred ceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceE
Confidence 99999999999999999987 7899999999999999999999999999999999999999999987
No 31
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.90 E-value=1.4e-23 Score=223.13 Aligned_cols=144 Identities=23% Similarity=0.276 Sum_probs=126.9
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-----------cchHHHHHHHHHHHHhcCCCCcc
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----------LGKEVQVLKEKNLMKSVSPSACV 832 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-----------~~~~~~~~~E~~il~~l~~~~~i 832 (908)
.+..+++|++.+.||+|.||.|.++++..+++.||||++.+..... ....+.+.+|+.||+++ +||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nV 170 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNV 170 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCe
Confidence 3457999999999999999999999999999999999998765432 11236899999999999 59999
Q ss_pred ceeeeeeccC--CeEEEEEecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 833 PQILCTCADS--MHAGLLLNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 833 ~~~~~~~~~~--~~~~iv~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++.+..+. +++|||+|||..|.+...=. +. +++.+++.|+..++.||+|||.+|||||||||+|+||+++|++|
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK 250 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK 250 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence 9999998764 68999999999888765433 55 99999999999999999999999999999999999999999987
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=6e-23 Score=227.44 Aligned_cols=143 Identities=19% Similarity=0.290 Sum_probs=130.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhcc--chHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL--GKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~--~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
.....|.+.+.||+|+||.|+++++..++..+|+|++.+...... ...+.+.+|+.+++.+.+||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 457889999999999999999999999999999998877533211 345677789999999977999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC-CccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~-g~vK 908 (908)
.+|+||||+.||+|++++. +++.|..++.++.|++.|++|||++||+||||||||||++.+ +++|
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~K 161 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLK 161 (370)
T ss_pred eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEE
Confidence 9999999999999999997 889999999999999999999999999999999999999999 8876
No 33
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=1.8e-23 Score=224.28 Aligned_cols=140 Identities=14% Similarity=0.199 Sum_probs=125.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--C
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--M 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~ 843 (908)
...+.|+.++.||+|+||.||++++..+|+.||+|.+..... +.+......+|+.||++|. ||||+++.+...+. .
T Consensus 114 r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~-HpNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 114 RRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLD-HPNIIKLEEIVTSKLSG 191 (560)
T ss_pred cchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcC-CCcccceeeEEEecCCc
Confidence 356789999999999999999999999999999999987553 3445567789999999995 99999999887665 7
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|||+|||+. +|.-++. -.|++.+++.|+.||+.||+|+|++||+|||||.+|||||.+|.+|
T Consensus 192 siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LK 258 (560)
T KOG0600|consen 192 SIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLK 258 (560)
T ss_pred eEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEE
Confidence 89999999965 8888887 3799999999999999999999999999999999999999999986
No 34
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=2e-24 Score=215.12 Aligned_cols=143 Identities=16% Similarity=0.199 Sum_probs=128.1
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee-eeccC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC-TCADS 842 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~-~~~~~ 842 (908)
...++.+|+++++||+|+||.||+|++..++..+|+|.+.-. ..+....+.+..|+.+|++|+ ||||+++|. .|..+
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~-HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLN-HPNIVQYYAHSFIED 91 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcC-CchHHHHHHHhhhcc
Confidence 355789999999999999999999999999999999998743 344556778999999999996 999999998 56655
Q ss_pred Ce-EEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh--CC--cEecCCCCCcEEEcCCCccC
Q 002560 843 MH-AGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHK--RG--VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~-~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~--~g--IiHrDIKp~NILi~~~g~vK 908 (908)
+. ++|+||||.+|+|.++++ +.+++..++.|+.|++.||..+|+ .. |+||||||.||+|+.+|.+|
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvK 168 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVK 168 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCcee
Confidence 55 999999999999999997 569999999999999999999999 44 99999999999999999886
No 35
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=1.8e-23 Score=222.65 Aligned_cols=140 Identities=14% Similarity=0.269 Sum_probs=124.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-e
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-H 844 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-~ 844 (908)
+-++.|.+++.||.|+||.||+++.+.++..||+|.+++....- ..-.-++|+..|++++.||||+++.+++.+.+ .
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~--ee~~nLREvksL~kln~hpniikL~Evi~d~~~~ 84 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRI 84 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH--HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCce
Confidence 35688999999999999999999999999999999997755321 22335789999999988999999999999888 9
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||| .++|+++++ ..|++..++.|+.||++||.|+|.+|+.|||+||||||+.....+|
T Consensus 85 L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iK 150 (538)
T KOG0661|consen 85 LYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIK 150 (538)
T ss_pred EeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeE
Confidence 99999999 579999998 6799999999999999999999999999999999999998654443
No 36
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.88 E-value=1.3e-22 Score=201.23 Aligned_cols=137 Identities=14% Similarity=0.190 Sum_probs=124.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|...+.||+|.||.||++++..||+.+|+|.++..... .+......+|+..|+.+. |+||+.+.+.|...+.+.+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k-dGi~~talREIK~Lqel~-h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK-DGINRTALREIKLLQELK-HPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc-cCccHHHHHHHHHHHHcc-CcchhhhhhhccCCCceEEE
Confidence 4678889999999999999999999999999999876432 334557889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||++ .+|...++ ..++...++.|+.+++.||.|||++.|+||||||.|+||+.+|.+|
T Consensus 80 fEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lK 141 (318)
T KOG0659|consen 80 FEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLK 141 (318)
T ss_pred EEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEE
Confidence 99996 59999998 5689999999999999999999999999999999999999999887
No 37
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.88 E-value=3.8e-22 Score=224.50 Aligned_cols=139 Identities=22% Similarity=0.379 Sum_probs=129.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++ ||+|++++..+.+..++|+|
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~-~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD-SLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC-CCCcceEEEEEecCCeEEEE
Confidence 47999999999999999999999999999999998766555556678889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++||+|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vk 141 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVK 141 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEE
Confidence 99999999999997 7799999999999999999999999999999999999999998875
No 38
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.88 E-value=6.8e-23 Score=221.20 Aligned_cols=138 Identities=19% Similarity=0.233 Sum_probs=129.0
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|.+.+.||+|+||.||+++.+.+.+.||+|.+.|.... .+....+.+|++|++.++ ||||+.++++|+...++|+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lk-Hpniv~m~esfEt~~~~~v 78 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLK-HPNIVEMLESFETSAHLWV 78 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcC-CcchhhHHHhhcccceEEE
Confidence 57899999999999999999999999999999999886533 345678999999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||+.| +|+.+|. +.++|+.++.++.+++.||.|||+++|+|||+||.|||++..|++|
T Consensus 79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~K 140 (808)
T KOG0597|consen 79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLK 140 (808)
T ss_pred Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCcee
Confidence 9999977 9999998 8999999999999999999999999999999999999999999886
No 39
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.88 E-value=6.5e-22 Score=219.45 Aligned_cols=145 Identities=22% Similarity=0.420 Sum_probs=133.7
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.....+++|++.+.||+|+||.||+|+++.+++.+|+|++.+...........+.+|+.+++.++ ||||+++++.+.+.
T Consensus 12 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~ 90 (329)
T PTZ00263 12 TSSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS-HPFIVNMMCSFQDE 90 (329)
T ss_pred cCCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCCCcEEEEEEcC
Confidence 34567899999999999999999999999999999999998776555556678899999999995 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+|++|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 158 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVK 158 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEE
Confidence 99999999999999999997 6799999999999999999999999999999999999999998775
No 40
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=7.1e-22 Score=208.99 Aligned_cols=140 Identities=17% Similarity=0.218 Sum_probs=131.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||.|..+.||+++...++..||||++....+... ...+.+|+..|+.+ +||||++++..|..+..+
T Consensus 23 ~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~--ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~L 99 (516)
T KOG0582|consen 23 LNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND--LDALRKEVQTMSLI-DHPNIVTYHCSFVVDSEL 99 (516)
T ss_pred CCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh--HHHHHHHHHHhhhc-CCCCcceEEEEEEeccee
Confidence 467899999999999999999999999999999999988776543 78899999999998 599999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||.||.+|++.+++. ..++|..+..+.++++.||.|||.+|.||||||+.||||+.+|.||
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~Vk 166 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVK 166 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEE
Confidence 99999999999999997 5699999999999999999999999999999999999999999886
No 41
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.87 E-value=6e-22 Score=224.14 Aligned_cols=139 Identities=23% Similarity=0.368 Sum_probs=128.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++ ||||+++++++.+..++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESD-SPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCeeEEE
Confidence 47999999999999999999999999999999998766555556678899999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..++.|+.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~k 141 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK 141 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEE
Confidence 99999999999987 7799999999999999999999999999999999999999988764
No 42
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.87 E-value=8.3e-22 Score=223.16 Aligned_cols=138 Identities=22% Similarity=0.319 Sum_probs=128.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+. ||+|++++..+.+..++|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC-CCCeeeeEEEEecCCEEEEEE
Confidence 6899999999999999999999999999999998776655566778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++||+|.+++. +.+++..++.++.||+.||.|||++||+||||||+||||+.+|++|
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~k 141 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIK 141 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEE
Confidence 9999999999987 6799999999999999999999999999999999999999988775
No 43
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.87 E-value=8.3e-22 Score=222.00 Aligned_cols=139 Identities=22% Similarity=0.390 Sum_probs=128.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..++ ||||+++++.+.+..++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD-NPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCeEEEE
Confidence 47999999999999999999999999999999998766555556677889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~k 141 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIK 141 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence 99999999999987 6799999999999999999999999999999999999999998764
No 44
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1.9e-22 Score=222.43 Aligned_cols=141 Identities=17% Similarity=0.208 Sum_probs=132.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+.-|++++.||.|+.|.|.++++..||+..|||++.+...........+.+|+-||+.+. ||||+++|+.|.++.++|
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~-HpnVl~LydVwe~~~~ly 88 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIE-HPNVLRLYDVWENKQHLY 88 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhc-CCCeeeeeeeeccCceEE
Confidence 5677999999999999999999999999999999999875444556678999999999996 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||++||.|+++|- +++++.++..+++||+.|+.|+|..+|+||||||+|+|||..+++|
T Consensus 89 lvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIK 152 (786)
T KOG0588|consen 89 LVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIK 152 (786)
T ss_pred EEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEe
Confidence 9999999999999997 8999999999999999999999999999999999999999998876
No 45
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.87 E-value=1.1e-21 Score=221.91 Aligned_cols=139 Identities=22% Similarity=0.352 Sum_probs=128.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|++..+++.||+|++.+...........+.+|+.+++.+. ||+|++++..|.+.+++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD-NEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999998766544555677889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ik 141 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIK 141 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEE
Confidence 99999999999997 6789999999999999999999999999999999999999988764
No 46
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.87 E-value=1.3e-21 Score=221.89 Aligned_cols=138 Identities=22% Similarity=0.334 Sum_probs=128.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++++.||+|+||.||+|++..+++.+|+|++.+...........+.+|+.+++.+. ||+|++++..+.+.+++|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~-h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD-NEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC-CCcCCeEEEEEEeCCEEEEEE
Confidence 5899999999999999999999999999999998776555566778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++|+|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|++|
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~k 141 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIK 141 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 9999999999987 6789999999999999999999999999999999999999998875
No 47
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.87 E-value=2.2e-22 Score=205.24 Aligned_cols=140 Identities=16% Similarity=0.220 Sum_probs=124.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--cCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--DSM 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~~~ 843 (908)
-++++|+.+..|++|+||.||+++++.|++.||+|.++... ...+..-.-++|+.+|.+++ ||||+.+-.... +-+
T Consensus 73 rsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~-H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 73 RSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKAR-HPNIVEVKEVVVGSNMD 150 (419)
T ss_pred ccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcC-CCCeeeeEEEEeccccc
Confidence 36899999999999999999999999999999999998765 23333445689999999985 999999987653 456
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|||||||+. +|..+|. ++|...+++.++.|++.|++|||.+.|+||||||+|+|+++.|.+|
T Consensus 151 ~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lK 217 (419)
T KOG0663|consen 151 KIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILK 217 (419)
T ss_pred eeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEE
Confidence 79999999964 8999887 6899999999999999999999999999999999999999999876
No 48
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.87 E-value=2e-21 Score=216.19 Aligned_cols=150 Identities=19% Similarity=0.330 Sum_probs=134.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEEECCCC-ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceee
Q 002560 758 IDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSE-NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL 836 (908)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~-~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~ 836 (908)
.++.....+.+++|++.+.||+|+||.||+|.+..++ ..+|+|++.+...........+.+|+.++..++ ||||++++
T Consensus 19 ~~~~~~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~ 97 (340)
T PTZ00426 19 KEPKRKNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN-HPFCVNLY 97 (340)
T ss_pred cccccCCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCCcceE
Confidence 3345556788999999999999999999999876655 689999998776555556678899999999995 99999999
Q ss_pred eeeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 837 CTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 837 ~~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++.+...+|++|||+++|+|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 98 ~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ik 171 (340)
T PTZ00426 98 GSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIK 171 (340)
T ss_pred EEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEE
Confidence 99999999999999999999999997 6799999999999999999999999999999999999999998775
No 49
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.86 E-value=2e-21 Score=218.75 Aligned_cols=142 Identities=26% Similarity=0.395 Sum_probs=129.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++++..+++.+|+|++.+...........+.+|+.+++.++ ||+|+++++.+.+..++
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~-hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN-SPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEE
Confidence 35688999999999999999999999999999999998765544445567888999999985 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||+++|+|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~k 182 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLK 182 (370)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEE
Confidence 99999999999999998 6799999999999999999999999999999999999999998875
No 50
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.86 E-value=2.2e-21 Score=218.01 Aligned_cols=139 Identities=22% Similarity=0.384 Sum_probs=128.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||+|.++.+++.||+|++.+...........+..|+.++..++ ||+|++++..+.+..++|+|
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD-GAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC-CCCEeeEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999998766555556778899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..++.|+.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vk 141 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVK 141 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEE
Confidence 99999999999987 6799999999999999999999999999999999999999998875
No 51
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.86 E-value=1.8e-21 Score=212.11 Aligned_cols=139 Identities=29% Similarity=0.419 Sum_probs=127.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.+|+|++.............+.+|+.+++.++ ||||+++++.+.+..++|++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS-HPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC-CCcHhhhHhhhccCCeEEEE
Confidence 47999999999999999999999999999999998765544455677889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~k 141 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIK 141 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence 99999999999997 6799999999999999999999999999999999999999988765
No 52
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.86 E-value=2.7e-21 Score=217.88 Aligned_cols=143 Identities=26% Similarity=0.377 Sum_probs=130.8
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.++.++|++.+.||+|+||.||++++..+++.||+|++.+...........+.+|+.+++.++ ||+|+++++.+.+.++
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-h~~iv~~~~~~~~~~~ 117 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN-SEWIVQLHYAFQDDKY 117 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC-CCCcceEEEEEecCCE
Confidence 456889999999999999999999999999999999998765544445566788999999985 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||++||+|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~k 182 (370)
T cd05596 118 LYMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 182 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEE
Confidence 999999999999999998 6799999999999999999999999999999999999999998775
No 53
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.86 E-value=3.2e-22 Score=211.25 Aligned_cols=144 Identities=26% Similarity=0.404 Sum_probs=135.3
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
+.++.+.|..-++||+|+||.||-|+-+.||+.||+|.+.|..+.......-.++|..||++++ +++||.+-..|+..+
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~-s~FiVslaYAfeTkd 258 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVS-SPFIVSLAYAFETKD 258 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhc-cCcEEEEeeeecCCC
Confidence 3567888999999999999999999999999999999999988888777888999999999995 899999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+||..|.||+|.-.|. ..|++..+++|+++|+.||++||+.+|++||+||+|||+|+.||++
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvR 327 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVR 327 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeE
Confidence 9999999999999988876 4799999999999999999999999999999999999999999985
No 54
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.86 E-value=3.7e-21 Score=213.02 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=127.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++++.||+|+||.||+|++..+++.||+|++.+...........+..|..++..+.+|++|++++..+.+.+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 68999999999999999999999999999999987665555566778899999999877788999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 141 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIK 141 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEE
Confidence 9999999999987 6789999999999999999999999999999999999999998764
No 55
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.86 E-value=1.8e-21 Score=207.02 Aligned_cols=137 Identities=13% Similarity=0.243 Sum_probs=122.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC--eE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--HA 845 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--~~ 845 (908)
..+|...+.||+|+||.||++.+++++..+|+|.+.... ....+.+.+|+.+|.+++ ||+|+++++...... .+
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~---~~~~~~l~~Ei~iL~~l~-~p~IV~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED---SPTSESLEREIRILSRLN-HPNIVQYYGSSSSRENDEY 91 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc---chhHHHHHHHHHHHHhCC-CCCEEeeCCccccccCeee
Confidence 567899999999999999999999999999999987652 112567899999999997 999999999754444 69
Q ss_pred EEEEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCccC
Q 002560 846 GLLLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~vK 908 (908)
+++|||+++|+|.+++. + .++++.++.|++||+.||.|||++|||||||||+|||++. +|.+|
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~K 158 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVK 158 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEE
Confidence 99999999999999998 4 7999999999999999999999999999999999999999 67765
No 56
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.86 E-value=4e-21 Score=216.43 Aligned_cols=143 Identities=27% Similarity=0.369 Sum_probs=130.5
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+..++|++.+.||+|+||.||+|+++.+++.+|+|++.+...........+.+|+.+++.+ +||||++++..+.+..+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~ 117 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRY 117 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCE
Confidence 45678999999999999999999999999999999999876554444556688899999998 49999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||+++++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++|
T Consensus 118 ~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ik 182 (371)
T cd05622 118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLK 182 (371)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEE
Confidence 999999999999999998 7799999999999999999999999999999999999999998875
No 57
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.86 E-value=4.4e-21 Score=213.27 Aligned_cols=139 Identities=23% Similarity=0.368 Sum_probs=128.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.||+|++++...........+.+|+.++..++ ||||++++..+.+.++.|+|
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK-SEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC-CCCCccEEEEEEcCCEEEEE
Confidence 47999999999999999999999999999999998776555556678899999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 141 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIK 141 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEE
Confidence 99999999999997 6799999999999999999999999999999999999999998775
No 58
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.85 E-value=6.5e-21 Score=211.60 Aligned_cols=139 Identities=22% Similarity=0.388 Sum_probs=127.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++++..+++.||+|++.+...........+..|+.++..+ +|++|++++..+.+.+++|+|
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEE
Confidence 4799999999999999999999999999999999876555555566788899999998 599999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~k 142 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIR 142 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEE
Confidence 99999999999996 5799999999999999999999999999999999999999988764
No 59
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.85 E-value=5.9e-21 Score=211.16 Aligned_cols=139 Identities=20% Similarity=0.271 Sum_probs=127.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+.+|++|++++..+.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 47889999999999999999999999999999987665555556678889999998887899999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ik 141 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 9999999999987 6799999999999999999999999999999999999999998764
No 60
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.85 E-value=1.5e-21 Score=203.81 Aligned_cols=138 Identities=20% Similarity=0.235 Sum_probs=122.8
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCc-cceeeeeeccCC---
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC-VPQILCTCADSM--- 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~-i~~~~~~~~~~~--- 843 (908)
+..|+.++.||+|+||.||+++.+.+|+.||+|.++...-. ++......+|+.+|+.++ |+| |+.+++.+.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~-~~~~iv~L~dv~~~~~~~~ 87 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLS-HANHIVRLHDVIHTSNNHR 87 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhC-CCcceEEEEeeeeeccccc
Confidence 66788888999999999999999999999999998765422 344566789999999996 777 999999998877
Q ss_pred ---eEEEEEecCCCCcHHHHHc--C----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 ---HAGLLLNTYLACPLASILH--T----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ---~~~iv~e~~~gg~L~~~l~--~----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|+||+ ..+|..++. . .++...++.++.||+.||.|||+++|+||||||+||||+++|.+|
T Consensus 88 ~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lK 160 (323)
T KOG0594|consen 88 GIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLK 160 (323)
T ss_pred ccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEe
Confidence 899999999 469999997 2 478889999999999999999999999999999999999999886
No 61
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=7.2e-22 Score=200.37 Aligned_cols=145 Identities=22% Similarity=0.322 Sum_probs=139.0
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..+.+++|.++++||+|+|.+|.+++++.|.+.||+|+++|..+.+.+....+..|..++.+.+.||+++-++..|+.+.
T Consensus 245 ~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes 324 (593)
T KOG0695|consen 245 QGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES 324 (593)
T ss_pred cccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc
Confidence 35789999999999999999999999999999999999999998888889999999999999988999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|.||++||+|.-.++ .+++++.+++|..+|+.||.|||++|||+||||.+|+|+|..|++|
T Consensus 325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghik 391 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIK 391 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCcee
Confidence 9999999999999988887 7899999999999999999999999999999999999999999987
No 62
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.85 E-value=8.8e-21 Score=210.57 Aligned_cols=139 Identities=22% Similarity=0.358 Sum_probs=126.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+++++.+++.||+|++.+...........+..|..++..+ +|++|++++..+.+.++.|+|
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 5799999999999999999999999999999999875544444556678899999888 499999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++||+|.+++. ..+++..++.++.|++.||+|||++||+||||||+|||++.+|.+|
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~k 142 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIR 142 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEE
Confidence 99999999999996 5789999999999999999999999999999999999999988764
No 63
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.85 E-value=9.3e-21 Score=209.68 Aligned_cols=139 Identities=19% Similarity=0.260 Sum_probs=127.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||+|++..+++.+|+|++.+..............|..++..+.+||+|++++..+.+.+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 68999999999999999999999999999999987665445556677888899888877999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++|+|..++. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k 141 (323)
T cd05616 81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK 141 (323)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEE
Confidence 9999999999987 6799999999999999999999999999999999999999998765
No 64
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.85 E-value=7.3e-21 Score=213.12 Aligned_cols=139 Identities=24% Similarity=0.388 Sum_probs=129.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++ ||+|++++..+.+.+++|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD-SPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC-CCCccchhhheecCCeEEEE
Confidence 47999999999999999999999999999999998876655566778899999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~k 141 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIK 141 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999997 5799999999999999999999999999999999999999998765
No 65
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.85 E-value=7.9e-21 Score=210.23 Aligned_cols=133 Identities=23% Similarity=0.319 Sum_probs=122.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.||+|++.+...........+.+|..+++.++ ||||++++..+...+++|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667889999999995 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~k 135 (323)
T cd05571 80 GELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIK 135 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEE
Confidence 99999987 6799999999999999999999999999999999999999988765
No 66
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=5.4e-22 Score=206.43 Aligned_cols=146 Identities=18% Similarity=0.247 Sum_probs=138.6
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
...+...+|.++.+||+|+||.|.++..+.+.+.||+|++++..+......+..+.|.++|....+.|++++++..|+.-
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 34788999999999999999999999999999999999999998887778888899999999887799999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+|+||||+.||+|.-.++ ++|.++.+.+|+++|+.||-+||++|||+||||.+|||+|.+||+|
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiK 490 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIK 490 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceE
Confidence 99999999999999998888 8999999999999999999999999999999999999999999987
No 67
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.84 E-value=8.9e-21 Score=209.94 Aligned_cols=137 Identities=18% Similarity=0.182 Sum_probs=128.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
-..|++.+.||+|.||.||+|+.+.+|+.+|+|++.+...........+.+|+.||+.+..||||+.+++.|.+...+|+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 45699999999999999999999999999999999998876665677899999999999779999999999999999999
Q ss_pred EEecCCCCcHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 848 LLNTYLACPLASILHTP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 848 v~e~~~gg~L~~~l~~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
|||+|.||+|++.+... +++..+..++.|++.++.|||+.||+||||||+|+|+...
T Consensus 114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~ 171 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASK 171 (382)
T ss_pred EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccc
Confidence 99999999999999854 9999999999999999999999999999999999999754
No 68
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.84 E-value=1.9e-20 Score=207.88 Aligned_cols=139 Identities=20% Similarity=0.355 Sum_probs=127.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.++.+++.+|+|++++...........+..|+.+++.+ +||+|++++..+.+.++.|+|
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEE
Confidence 4799999999999999999999999999999999876654455566788899999987 599999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~k 142 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIK 142 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEE
Confidence 99999999999997 5699999999999999999999999999999999999999998875
No 69
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.84 E-value=1.5e-20 Score=208.01 Aligned_cols=133 Identities=23% Similarity=0.341 Sum_probs=121.6
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++++..+++.||+|++.+...........+.+|..+++.++ ||||+++++.|.....+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR-HPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC-CCCCcceeeEEecCCEEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667888999999995 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k 135 (323)
T cd05595 80 GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 135 (323)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEE
Confidence 99999887 6799999999999999999999999999999999999999988765
No 70
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.84 E-value=1.7e-20 Score=207.91 Aligned_cols=133 Identities=23% Similarity=0.333 Sum_probs=121.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++++..+++.||+|++.+...........+.+|+.+++.+. ||+|++++..+...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~-hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTR-HPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999999999999999998766555556678889999999985 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~k 135 (328)
T cd05593 80 GELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIK 135 (328)
T ss_pred CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEE
Confidence 99999887 6799999999999999999999999999999999999999988765
No 71
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.84 E-value=2.5e-20 Score=202.39 Aligned_cols=138 Identities=25% Similarity=0.380 Sum_probs=124.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+.+|+.++..++ |+++++++..+.+.+.+|++|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEEEEEccCCeEEEEE
Confidence 3788999999999999999999999999999988766544444566889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~k 142 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIR 142 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEE
Confidence 9999999988874 3689999999999999999999999999999999999999888764
No 72
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.84 E-value=1.9e-20 Score=207.76 Aligned_cols=134 Identities=22% Similarity=0.314 Sum_probs=123.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.||+|++++...........+..|..++..+.+||||+++++.+.+...+|++|||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999999999999999998766555555677889999999987799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~k 136 (329)
T cd05588 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIK 136 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence 99999886 6899999999999999999999999999999999999999988764
No 73
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.84 E-value=2.6e-20 Score=206.89 Aligned_cols=139 Identities=21% Similarity=0.375 Sum_probs=126.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+++++.+++.+|+|++.+...........+..|+.++..+ +|++|++++..+.+...+|+|
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEE
Confidence 4799999999999999999999999999999999876544444555688899999888 599999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++|+|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++|
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~k 142 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIR 142 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEE
Confidence 99999999999996 5689999999999999999999999999999999999999988764
No 74
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.84 E-value=2.6e-20 Score=206.27 Aligned_cols=138 Identities=19% Similarity=0.300 Sum_probs=124.1
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCeEEEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~~~iv 848 (908)
|++++.||+|+||.||++.+..+++.||+|++++...........+.+|+.++..++ +||||+++++++.+.+++|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 788999999999999999999999999999998766544455667888887765432 499999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~k 141 (324)
T cd05589 81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVK 141 (324)
T ss_pred EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEE
Confidence 99999999999887 7899999999999999999999999999999999999999998765
No 75
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.84 E-value=2.1e-20 Score=206.66 Aligned_cols=134 Identities=22% Similarity=0.322 Sum_probs=122.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+.+||+|+++++.+.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667888999998876799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~k 136 (321)
T cd05591 81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCK 136 (321)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 99999887 6799999999999999999999999999999999999999998765
No 76
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.83 E-value=2.6e-20 Score=205.09 Aligned_cols=131 Identities=24% Similarity=0.371 Sum_probs=120.7
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+|++..+++.||+|++.+...........+.+|+.++..++ ||||++++..+.+.+.+|++|||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN-CPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 799999999999999999999999998766555556677889999999995 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~k 133 (312)
T cd05585 80 LFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIA 133 (312)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEE
Confidence 999997 6799999999999999999999999999999999999999988764
No 77
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.83 E-value=3.9e-20 Score=205.59 Aligned_cols=139 Identities=22% Similarity=0.340 Sum_probs=124.5
Q ss_pred ceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhc-cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKC-LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+|++++.||+|+||.||+|+.. .+++.+|+|++.+..... ......+..|..++..+.+||+|++++..+...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 5899999999999999999874 478899999998755332 334567888999999997899999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~k 145 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVV 145 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEE
Confidence 99999999999999986 6799999999999999999999999999999999999999998764
No 78
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.83 E-value=2.5e-20 Score=205.94 Aligned_cols=134 Identities=22% Similarity=0.340 Sum_probs=122.4
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|+++.+++.||+|++.+...........+..|..++..+.+||+|+++++++.+.+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998766555556677888999998876799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~k 136 (320)
T cd05590 81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCK 136 (320)
T ss_pred chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEE
Confidence 99999887 6799999999999999999999999999999999999999988764
No 79
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.83 E-value=2.6e-20 Score=205.38 Aligned_cols=134 Identities=25% Similarity=0.404 Sum_probs=120.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+.+||+|+++++.+....++|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998765544445566777888887766799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~k 136 (316)
T cd05592 81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIK 136 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEE
Confidence 99999987 6799999999999999999999999999999999999999988765
No 80
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.83 E-value=3.1e-20 Score=205.82 Aligned_cols=134 Identities=24% Similarity=0.335 Sum_probs=123.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.+|+|++.+...........+..|..++..+.+||+|+.+++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998876555556677889999999987799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~k 136 (327)
T cd05617 81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIK 136 (327)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEE
Confidence 99999886 6799999999999999999999999999999999999999988765
No 81
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.83 E-value=4.5e-20 Score=204.45 Aligned_cols=133 Identities=23% Similarity=0.340 Sum_probs=121.0
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|.+..+++.+|+|++.+...........+..|..++..+. ||||++++..+.....+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~-hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR-HPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999999999999999998766555555667888999999985 99999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||+ +||+||||||+|||++.+|.+|
T Consensus 80 ~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~k 136 (325)
T cd05594 80 GELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIK 136 (325)
T ss_pred CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEE
Confidence 99999886 679999999999999999999997 7999999999999999998765
No 82
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.83 E-value=3.4e-20 Score=205.63 Aligned_cols=134 Identities=23% Similarity=0.322 Sum_probs=122.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++++..+++.+|+|++.+...........+..|..++..+.+||||+++++.+.+.+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999999999999999998776555555667889999998876799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|++|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~k 136 (329)
T cd05618 81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIK 136 (329)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEE
Confidence 99998886 6799999999999999999999999999999999999999998765
No 83
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.83 E-value=3.6e-20 Score=204.21 Aligned_cols=134 Identities=23% Similarity=0.353 Sum_probs=120.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|+++.+++.||+|++++..............|..++..+.+||+|+++++.+.+.+++|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999999999999998765444445566788888888765799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~k 136 (316)
T cd05620 81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIK 136 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence 99999987 6799999999999999999999999999999999999999988764
No 84
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.83 E-value=2.5e-20 Score=204.55 Aligned_cols=143 Identities=16% Similarity=0.215 Sum_probs=126.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCce-EEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENF-LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~-~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
....+...++.+.+.||.|+||+||++.+. |.. +|+|++......... ...+.+|+.+|.+++ ||||+++++++.
T Consensus 34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~-HpNIV~f~G~~~ 109 (362)
T KOG0192|consen 34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLR-HPNIVQFYGACT 109 (362)
T ss_pred cceecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCC-CCCeeeEEEEEc
Confidence 344566777888888999999999999885 444 999998876544433 778999999999995 999999999999
Q ss_pred cCC-eEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC-cEecCCCCCcEEEcCCC-ccC
Q 002560 841 DSM-HAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRG-VLYRGVSPDVLMLDKSG-HLQ 908 (908)
Q Consensus 841 ~~~-~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~g-IiHrDIKp~NILi~~~g-~vK 908 (908)
+.. .++|||||+++|+|..++. ..++...+..++.+|+.|++|||+++ ||||||||+|||++.++ ++|
T Consensus 110 ~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~K 184 (362)
T KOG0192|consen 110 SPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLK 184 (362)
T ss_pred CCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEE
Confidence 887 7999999999999999995 57999999999999999999999999 99999999999999997 765
No 85
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.83 E-value=5.3e-20 Score=200.18 Aligned_cols=138 Identities=17% Similarity=0.217 Sum_probs=122.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++++|++.+.||.|+||.||++.+..+++.+|+|.++.... ......+.+|+.+++.++ ||||+++++++.+....|
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 79 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLK-HANIVTLHDIIHTERCLT 79 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCC-CCCEeeEEEEEcCCCeEE
Confidence 47889999999999999999999999999999999865432 223456778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+.+ +|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k 143 (288)
T cd07871 80 LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELK 143 (288)
T ss_pred EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 99999975 8998886 4579999999999999999999999999999999999999988765
No 86
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.83 E-value=4.3e-19 Score=180.74 Aligned_cols=211 Identities=21% Similarity=0.351 Sum_probs=143.4
Q ss_pred CCCCCcceEEEecCCCCCCCcEEEEEecCCCcC---hHHHHHHHHHHHHHH--HHhcCC-cchhHHHHHHHHHHHHHHHH
Q 002560 110 LDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF---GAQCSQFVKRKLCEN--LLRNNK-FHEDAVDACHSSYLTTNSQL 183 (908)
Q Consensus 110 ~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~---G~~as~~~~~~l~~~--l~~~~~-~~~~~~~~l~~~~~~~~~~i 183 (908)
.-+..||++++..+ ....+.|||||+||| |--++.|..+.+... +.+... ...++...|..|+.++
T Consensus 87 ~~~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l---- 158 (330)
T KOG1379|consen 87 VGKGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAEL---- 158 (330)
T ss_pred CCCCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHHH----
Confidence 34457999999653 456799999999998 877888866655443 222222 3347788888777654
Q ss_pred HhccCCCCCCcceEEEEEEE--CCEEEEEEeccceEEEEEEcCCeeEEEeCCCCC--CCCChhHHHHHHHcCCEEeeecc
Q 002560 184 HADVLDDSMSGTTAVTVLVR--GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQ--TPFREDELERVKLSGARVLTLDQ 259 (908)
Q Consensus 184 ~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh--~~~~~~E~~Ri~~~gg~v~~~~~ 259 (908)
.+. ......+|||+++++. +++||+||+|||-..++|+|.. ..-|..| -.+.| .|
T Consensus 159 ~~~-~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~v----v~~S~~Q~H~FN~P----------------yQ 217 (330)
T KOG1379|consen 159 KSQ-KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKV----VFRSPEQQHYFNTP----------------YQ 217 (330)
T ss_pred hhc-CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEE----EEcCchheeccCCc----------------ee
Confidence 222 1122357888888887 8999999999999999998852 2223322 11111 01
Q ss_pred cccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCcccccc
Q 002560 260 IEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFL 339 (908)
Q Consensus 260 ~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l 339 (908)
+. -||+ ....+++|. .-.-+++.++++++|. ||||||||||.|
T Consensus 218 Ls------------------~~p~-----------~~~~~~~d~-------p~~ad~~~~~v~~GDv-IilATDGlfDNl 260 (330)
T KOG1379|consen 218 LS------------------SPPE-----------GYSSYISDV-------PDSADVTSFDVQKGDV-IILATDGLFDNL 260 (330)
T ss_pred ec------------------cCCc-----------cccccccCC-------ccccceEEEeccCCCE-EEEecccccccc
Confidence 10 0000 002223332 2345788999999999 799999999999
Q ss_pred ChHHHHHHHhc-----cCCHHHHHHHHHHHHHHHHHh------------------cCCCCCCeEEEEEEc
Q 002560 340 SSQAVVDMVAK-----YKDPRDACAAIVAESYRLWLQ------------------YETRTDDITVIVVHI 386 (908)
Q Consensus 340 ~~~ei~~~v~~-----~~~~~~~a~~Lv~~a~~~~~~------------------~~g~~DNiTvivv~~ 386 (908)
.+++|..++.. ..+++..|+.+++.|...... ++|..||||+||..+
T Consensus 261 ~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 261 PEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred cHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 99999999864 357899999999999876221 245689999999753
No 87
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.83 E-value=8.3e-21 Score=192.20 Aligned_cols=134 Identities=16% Similarity=0.223 Sum_probs=122.5
Q ss_pred eEEE-EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 771 MEWR-KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 771 ~~~~-~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
|++. +.||+|+|+.|-.|....++..||+|++.|.. .....++.+|++++.++.+|+||++++++|+++..+|+||
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~---gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf 155 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP---GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF 155 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCC---chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence 5543 57999999999999999999999999998763 3456789999999999999999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|-+.||+|...|. +.|++.++..++..|+.||.|||.+||.||||||+|||-.+..++
T Consensus 156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKV 215 (463)
T ss_pred ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCc
Confidence 9999999999997 789999999999999999999999999999999999998765543
No 88
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.82 E-value=9.2e-20 Score=198.00 Aligned_cols=138 Identities=25% Similarity=0.388 Sum_probs=124.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.+|+|++.............+.+|+.+++.++ ||+|+++++.+.+.+++|++|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC-CCCEeeeeeeecCCCeEEEEE
Confidence 4889999999999999999999999999999997765444444556788999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~ 142 (285)
T cd05605 80 TLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIR 142 (285)
T ss_pred eccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEE
Confidence 9999999998875 4589999999999999999999999999999999999999988764
No 89
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.82 E-value=4.1e-21 Score=190.43 Aligned_cols=141 Identities=14% Similarity=0.186 Sum_probs=126.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh-----ccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-----CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.+.|.-.+.||.|..+.|.+|.++.+++.+|+|++...... -....+....|+.||+++.+||+|+.+.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 56677788999999999999999999999999998643321 1234566788999999999999999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++|+|+|.|+.|.|+++|. -.+++..++.+++|++.|+.|||.++|+||||||+|||+|++.++|
T Consensus 96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~ 163 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIK 163 (411)
T ss_pred chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceE
Confidence 99999999999999999998 5799999999999999999999999999999999999999988775
No 90
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.82 E-value=8.2e-20 Score=201.36 Aligned_cols=134 Identities=22% Similarity=0.347 Sum_probs=120.1
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|++..+++.||+|++++..............|..++..+.+||+|+++++.+.+.+.+|++|||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999999999999998765443444566778888888765699999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~k 136 (316)
T cd05619 81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIK 136 (316)
T ss_pred CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEE
Confidence 99999997 5799999999999999999999999999999999999999988764
No 91
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.82 E-value=7.8e-20 Score=201.82 Aligned_cols=134 Identities=22% Similarity=0.326 Sum_probs=122.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+.+||||+++++.+.+.+++|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999999999999999998876555555667888999998886799999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~k 136 (318)
T cd05570 81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIK 136 (318)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEE
Confidence 99999887 5799999999999999999999999999999999999999988764
No 92
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.82 E-value=9.9e-21 Score=176.52 Aligned_cols=137 Identities=17% Similarity=0.216 Sum_probs=124.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
.+|.-.++||+|+||+||+++++.+++.+|+|.++... .+++.....++|+.+++.++ |.||+++++....++.+-+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelk-hknivrl~dvlhsdkkltlv 79 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELK-HKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhh-hcceeehhhhhccCceeEEe
Confidence 45666789999999999999999999999999987654 33455667899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||| ..+|..+.. +.++...++.++.|++.||.|+|+++++|||+||.|+||+.+|.+|
T Consensus 80 fe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelk 141 (292)
T KOG0662|consen 80 FEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELK 141 (292)
T ss_pred HHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEE
Confidence 9999 568888876 8899999999999999999999999999999999999999999886
No 93
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.82 E-value=5.5e-20 Score=202.91 Aligned_cols=142 Identities=16% Similarity=0.188 Sum_probs=131.2
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
......|.+.+.||+|.|+.|.++++..++..+|||++.+...... ....+.+|+++|+.++ ||||+++|.+......
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~-~~~k~~rev~imk~l~-HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPS-KRQKLGREVDIMKSLN-HPNIVKLFSVIETEAT 129 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChH-HHHHHHHHHHHHHhcC-Ccceeeeeeeeeecce
Confidence 4467889999999999999999999999999999999998876554 3455899999999996 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||+.+|.+++++. +.+.+..++.++.|++.|++|||+++|+|||||++||||+.+-++|
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnik 195 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIK 195 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccccee
Confidence 999999999999999997 7888899999999999999999999999999999999999887665
No 94
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.82 E-value=9.1e-20 Score=201.98 Aligned_cols=133 Identities=22% Similarity=0.315 Sum_probs=117.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHH-HHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNL-MKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~i-l~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||++.+..+++.+|+|++.+...........+..|..+ ++.+ +||||++++..+...+.+|++|||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTTEKLYFVLDFVN 79 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhC-CCCCCccEEEEEecCCEEEEEEcCCC
Confidence 369999999999999999999999999987654444445566677665 5556 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~k 136 (325)
T cd05604 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVV 136 (325)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence 999998887 6799999999999999999999999999999999999999998765
No 95
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.82 E-value=1e-19 Score=201.38 Aligned_cols=133 Identities=22% Similarity=0.346 Sum_probs=117.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHH-HHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNL-MKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~i-l~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||++.+..+++.+|+|++.+...........+..|..+ ++.+ +||||+++++.+.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l-~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNV-KHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhC-CCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 369999999999999999999999999987665444445566677665 4566 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~k 136 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVV 136 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEE
Confidence 999999987 6799999999999999999999999999999999999999998765
No 96
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.82 E-value=1e-19 Score=202.02 Aligned_cols=132 Identities=22% Similarity=0.341 Sum_probs=118.2
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCeEEEEEecCCC
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
||+|+||.||++++..+++.+|+|++.+..............|..++..+. +||+|+.++..+.+...+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999999999999999998766554445556677877777653 699999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~k 136 (330)
T cd05586 81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIA 136 (330)
T ss_pred ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence 99999887 6799999999999999999999999999999999999999988764
No 97
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.82 E-value=1.2e-19 Score=200.77 Aligned_cols=133 Identities=22% Similarity=0.332 Sum_probs=117.6
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHH-HHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKN-LMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~-il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||+|++..+++.||+|++.+...........+..|.. +++.+ +||||++++..+.+.+..|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNL-KHPFLVGLHYSFQTAEKLYFVLDYVN 79 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCEEEEEEcCCC
Confidence 36999999999999999999999999998766544444556666665 46666 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|...+. ..+++..++.++.||+.||.|||++||+||||||+||||+.+|.+|
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~k 136 (321)
T cd05603 80 GGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVV 136 (321)
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEE
Confidence 999998886 6799999999999999999999999999999999999999998765
No 98
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.82 E-value=1.4e-19 Score=218.12 Aligned_cols=141 Identities=19% Similarity=0.295 Sum_probs=129.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+++|++++.||.|+||.||+|.+..+++.||+|++.+...........+..|+.++..++ ||+|++++..+....++|
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~-hp~Iv~~~~~~~~~~~~~ 80 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK-SPFIVHLYYSLQSANNVY 80 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC-CCCcCeEEEEEEECCEEE
Confidence 4789999999999999999999999999999999998765555555677889999999985 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||||+.|++|.+++. +.+++..++.|+.||+.||.|||.+||+||||||+||||+.+|++|
T Consensus 81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vk 144 (669)
T cd05610 81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIK 144 (669)
T ss_pred EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEE
Confidence 9999999999999997 6789999999999999999999999999999999999999988764
No 99
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.82 E-value=1.2e-19 Score=200.96 Aligned_cols=133 Identities=23% Similarity=0.347 Sum_probs=116.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHH-HHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNL-MKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~i-l~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
+.||+|+||.||+|++..+++.||+|++.+...........+..|... ++.+ +||||++++..+...+.+|++|||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~-~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV-KHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhC-CCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 369999999999999999999999999987654444444555666554 5666 59999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~k 136 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIV 136 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEE
Confidence 999999997 6789999999999999999999999999999999999999988764
No 100
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.82 E-value=1.4e-19 Score=198.47 Aligned_cols=137 Identities=16% Similarity=0.210 Sum_probs=121.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||+|+||.||+|++..+++.+|+|++..... ......+.+|+.+++.++ ||||+++++++.+....|+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTL 80 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCC-CCCcCeEEEEEecCCeEEE
Confidence 4789999999999999999999999999999999875432 222346778999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+. ++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 143 (303)
T cd07869 81 VFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELK 143 (303)
T ss_pred EEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 999995 67877775 5689999999999999999999999999999999999999988765
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.81 E-value=1.8e-19 Score=195.24 Aligned_cols=131 Identities=21% Similarity=0.353 Sum_probs=118.1
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+|.++.+++.+|+|.+.+...........+..|+.+++.+ +||+|++++..+....+.|++|||+++++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 69999999999999999999999999876554444556778899999999 59999999999999999999999999999
Q ss_pred HHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|..++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~ 137 (280)
T cd05608 80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVR 137 (280)
T ss_pred HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 988773 4689999999999999999999999999999999999999888764
No 102
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.81 E-value=2e-19 Score=193.23 Aligned_cols=140 Identities=9% Similarity=0.065 Sum_probs=122.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+..++|++.+.||+|+||.||++.++ ..+..+|+|.++... .......+.+|+.++..++ ||||+++++.+...
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~ 78 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFD-HSNIVRLEGVITRG 78 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEecC
Confidence 45678999999999999999999865 345689999886542 1233457889999999985 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++.|+||||+++++|.+++. ..+++..++.++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~ 147 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCK 147 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEE
Confidence 99999999999999999986 4689999999999999999999999999999999999999988764
No 103
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.81 E-value=1.4e-19 Score=201.78 Aligned_cols=141 Identities=13% Similarity=0.165 Sum_probs=118.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.++..+.+||||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACT 81 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence 45578999999999999999999752 345689999986432 22234678899999999966999999999876
Q ss_pred cC-CeEEEEEecCCCCcHHHHHcC--------------------------------------------------------
Q 002560 841 DS-MHAGLLLNTYLACPLASILHT-------------------------------------------------------- 863 (908)
Q Consensus 841 ~~-~~~~iv~e~~~gg~L~~~l~~-------------------------------------------------------- 863 (908)
.. ..+|++|||+++|+|.+++..
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (338)
T cd05102 82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ 161 (338)
T ss_pred CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence 54 468999999999999998851
Q ss_pred --------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 --------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 --------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~k 214 (338)
T cd05102 162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVK 214 (338)
T ss_pred hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEE
Confidence 266778889999999999999999999999999999999888764
No 104
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.81 E-value=3.5e-20 Score=201.90 Aligned_cols=140 Identities=14% Similarity=0.175 Sum_probs=127.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe-E
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH-A 845 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~-~ 845 (908)
.+++|..++.+|+|+||.+++++++..++.|++|.+........ ..+...+|+.+++++ +||||+.+++.|..++. +
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l 79 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLL 79 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceE
Confidence 36889999999999999999999999999999999987665443 344788999999998 59999999999998888 9
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+|+||+||+|.+.+. ..|+++.+..|+.|++.|++|||+++|+|||||+.||+++.++.||
T Consensus 80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~Vk 146 (426)
T KOG0589|consen 80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVK 146 (426)
T ss_pred EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCcee
Confidence 99999999999999997 4699999999999999999999999999999999999999988764
No 105
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.81 E-value=3.6e-20 Score=192.89 Aligned_cols=130 Identities=18% Similarity=0.264 Sum_probs=111.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----Ce
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----MH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~~ 844 (908)
.|.-.+++|.|+||.||.+....+++.+|||.+..+.-.. -+|..+|+.+ +||||+++..+|... -+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~ 96 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKL-DHPNIVRLLYFFSSSTESDEVY 96 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhc-CCcCeeeEEEEEEecCCCchhH
Confidence 4777899999999999999999999999999876544222 3688999988 499999998777432 25
Q ss_pred EEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC-CccC
Q 002560 845 AGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS-GHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~-g~vK 908 (908)
+.+||||++ .+|.++++ ..++.-.++.|++||++||.|||+.||+||||||.|||+|.+ |.+|
T Consensus 97 lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LK 166 (364)
T KOG0658|consen 97 LNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLK 166 (364)
T ss_pred HHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEE
Confidence 678999996 59999887 679999999999999999999999999999999999999976 6654
No 106
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.81 E-value=2.2e-19 Score=198.66 Aligned_cols=133 Identities=22% Similarity=0.346 Sum_probs=118.3
Q ss_pred EEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhc-cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKC-LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
+.||+|+||.||+|+.. .+++.||+|++.+..... ......+.+|+.+++.++ ||||+++++.+..++.+|++||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK-HPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC-CCchhceeeEEecCCeEEEEEe
Confidence 67999999999999874 468899999998765432 234456788999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~k 140 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVK 140 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence 999999999997 6789999999999999999999999999999999999999998764
No 107
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.81 E-value=3.9e-19 Score=193.56 Aligned_cols=139 Identities=31% Similarity=0.421 Sum_probs=128.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|++.+...........+.+|+.+++.+. ||||+++++.+.+....|++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR-HPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC-CCCccceeeEEEcCCeEEEE
Confidence 47999999999999999999999999999999998766555556778899999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||+|.|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~k 141 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIK 141 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEE
Confidence 99999999999997 7799999999999999999999999999999999999999988764
No 108
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.80 E-value=3.2e-19 Score=195.60 Aligned_cols=143 Identities=11% Similarity=0.154 Sum_probs=123.5
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCce--EEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENF--LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~--~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..+.+++|++.+.||+|+||.||+|.+..++.. +++|.+... ........+.+|+.++.++.+||||+++++.+..
T Consensus 2 ~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~ 79 (303)
T cd05088 2 PVLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH 79 (303)
T ss_pred CccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC
Confidence 467889999999999999999999998877764 466665432 1223456788899999999669999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc--C----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 842 SMHAGLLLNTYLACPLASILH--T----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~--~----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
.+..|++|||+++++|.+++. + .+++..++.++.|++.||+|||++||+||||||+|||++.
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~ 159 (303)
T cd05088 80 RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 159 (303)
T ss_pred CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecC
Confidence 999999999999999999986 1 4788999999999999999999999999999999999998
Q ss_pred CCccC
Q 002560 904 SGHLQ 908 (908)
Q Consensus 904 ~g~vK 908 (908)
++.+|
T Consensus 160 ~~~~k 164 (303)
T cd05088 160 NYVAK 164 (303)
T ss_pred CCcEE
Confidence 88764
No 109
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.80 E-value=4.9e-19 Score=196.64 Aligned_cols=140 Identities=14% Similarity=0.177 Sum_probs=126.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++++..++..+|+|++.... .......+.+|+.+++.++ ||||+++++++.+.+.+
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 78 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEI 78 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCCCCeEEEEEEECCEE
Confidence 45688999999999999999999999999999999987542 2234567899999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++ +|+||||||+|||++.+|.+|
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~k 144 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIK 144 (331)
T ss_pred EEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEE
Confidence 99999999999999997 6789999999999999999999986 699999999999999988764
No 110
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.80 E-value=3.1e-19 Score=194.01 Aligned_cols=138 Identities=11% Similarity=0.168 Sum_probs=122.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|+++.+++.+|+|++...... ......+.+|+.+++.++ ||||+++++.+.....+|+|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLK-QENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCC-CccccchhhhEecCCEEEEE
Confidence 4799999999999999999999999999999998765322 234567888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.+..+.. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~k 140 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLK 140 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 99999887766554 5799999999999999999999999999999999999999988764
No 111
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.80 E-value=5e-19 Score=211.69 Aligned_cols=140 Identities=16% Similarity=0.191 Sum_probs=123.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|+||.||+|.+..+++.+|+|++............++.+|+.+++.+. ||||+++++.+.+.+..|+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~-HPNIVkl~~v~~d~~~lyL 79 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI-HPGIVPVYSICSDGDPVYY 79 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC-CcCcCeEEEEEeeCCEEEE
Confidence 468999999999999999999999999999999987654333344567899999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||++|++|.+++. ..++...+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 VMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 80 TMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEE
Confidence 999999999999885 1244567788999999999999999999999999999999988764
No 112
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.80 E-value=6.2e-19 Score=191.45 Aligned_cols=138 Identities=24% Similarity=0.372 Sum_probs=123.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.+|+|.+.+...........+.+|+.+++.++ |++++.++..+.+.++.|++|
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN-SRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC-CCCeeeeeEEEecCCEEEEEE
Confidence 3778899999999999999999999999999987765444444556788999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~ 142 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIR 142 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEE
Confidence 9999999999885 3589999999999999999999999999999999999999887653
No 113
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.80 E-value=4.1e-19 Score=196.15 Aligned_cols=132 Identities=23% Similarity=0.393 Sum_probs=117.4
Q ss_pred EEecCCCeEEEEEEEE---CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLL---RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~---~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++++ ..+++.+|+|++.+.... ......+..|+.+++.++ ||||+++++.+.+...+|+||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~ 79 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVN-HPFIVKLHYAFQTEGKLYLILDF 79 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCEEEEEEcC
Confidence 5799999999999986 357889999999875532 223456778999999995 99999999999999999999999
Q ss_pred CCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 138 (318)
T cd05582 80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIK 138 (318)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEE
Confidence 99999999997 6799999999999999999999999999999999999999988764
No 114
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.80 E-value=3.4e-19 Score=198.86 Aligned_cols=132 Identities=15% Similarity=0.156 Sum_probs=119.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC-----CCccceeeeeeccCCe
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP-----SACVPQILCTCADSMH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~-----~~~i~~~~~~~~~~~~ 844 (908)
.|++.+.||+|+||.|.+|++..|++.||||+++... ....+...|+.||..|++ .-|+++++++|...+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k----~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK----RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh----HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 6999999999999999999999999999999997654 345677789999999962 3489999999999999
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
+|||+|.+ +.+|+++|+ ..++...++.++.||+.||.+||+.||||+|||||||||.+-+.
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r 327 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKR 327 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCc
Confidence 99999998 679999998 56999999999999999999999999999999999999986553
No 115
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.80 E-value=3.4e-21 Score=188.31 Aligned_cols=134 Identities=13% Similarity=0.191 Sum_probs=121.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|++.+.||+|.|+.|++|.+..+|+.||+|++....+... ..+.+.+|++|.+.|+ ||||++++.++....+.|||
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~Lq-HP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcC-CCcEeehhhhhcccceeEEE
Confidence 569999999999999999999999999999999987665443 5678899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
+|++.|++|..-+- .-++|..+-.++.||+.||.|+|.+||||||+||+|+|+-++
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK 146 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK 146 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec
Confidence 99999999987664 568999999999999999999999999999999999999654
No 116
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.80 E-value=5.1e-19 Score=200.32 Aligned_cols=133 Identities=12% Similarity=0.149 Sum_probs=120.1
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+...+|++++.||+|+||.||+|.+..+++.+|+|.... ..+.+|+.+++.++ ||||++++++|.....
T Consensus 88 ~~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~-HpnIv~~~~~~~~~~~ 157 (391)
T PHA03212 88 GIEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAIN-HPSIIQLKGTFTYNKF 157 (391)
T ss_pred ccccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCC-CCCCCCEeEEEEECCe
Confidence 3556789999999999999999999999999999996432 34678999999995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++||++. ++|..++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 158 ~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vk 222 (391)
T PHA03212 158 TCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVC 222 (391)
T ss_pred eEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEE
Confidence 999999995 68888886 6799999999999999999999999999999999999999988764
No 117
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.80 E-value=6.2e-19 Score=190.61 Aligned_cols=131 Identities=19% Similarity=0.327 Sum_probs=117.3
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+++++.+++.||+|.+.+...........+..|+.+++.++ ||||++++..+.+..+.|++|||++|++
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~-hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN-SPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC-CCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 799999999999999999999999998765544444556677999999995 9999999999999999999999999999
Q ss_pred HHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~ 135 (277)
T cd05607 80 LKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCR 135 (277)
T ss_pred HHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEE
Confidence 998875 3588999999999999999999999999999999999999988764
No 118
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.80 E-value=8.3e-19 Score=190.49 Aligned_cols=137 Identities=25% Similarity=0.387 Sum_probs=123.2
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|+..+.||+|+||.||++.+..+++.+|+|.+.+...........+.+|+.+++.++ |++++.++..+.+.+..|++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~-~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN-SQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC-CcCceeEEEEEecCCEEEEEEE
Confidence 778899999999999999999999999999987765544444556788999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~k 142 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIR 142 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEE
Confidence 999999998875 3699999999999999999999999999999999999999887664
No 119
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.79 E-value=6.7e-19 Score=195.62 Aligned_cols=140 Identities=14% Similarity=0.165 Sum_probs=125.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+..++..+|+|++.... .......+.+|+.+++.++ ||||+++++++.+.+++
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~ 78 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECN-SPYIVGFYGAFYSDGEI 78 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCC-CCcccceeEEEEECCEE
Confidence 34578999999999999999999999999999999876542 2223457889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. +.+++..+..++.|++.||.|||++ +|+||||||+|||++.+|.+|
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~k 144 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 144 (333)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEE
Confidence 99999999999999997 6789999999999999999999985 799999999999999988764
No 120
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.79 E-value=3.8e-19 Score=204.77 Aligned_cols=140 Identities=17% Similarity=0.158 Sum_probs=122.9
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-cc---
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-AD--- 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-~~--- 841 (908)
+.-..+++.+.|.+|||+.||+|++...+..||+|++... +....+.+.+|+.+|+.|++|+|||.+++.. ..
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 4445688899999999999999999988899999987543 5667888999999999999999999999832 11
Q ss_pred ---CCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcCCCccC
Q 002560 842 ---SMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ---~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~~g~vK 908 (908)
.-.++|+||||.||.|-++|+ ..|++.++..|+.++++|+.+||... |||||||-|||||+.+|+.|
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~K 186 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYK 186 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEE
Confidence 134679999999999999997 56999999999999999999999998 99999999999999999765
No 121
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=1.3e-19 Score=198.21 Aligned_cols=137 Identities=15% Similarity=0.193 Sum_probs=126.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
...|.....||+|+.|.||.+....+++.+|+|.+..... ...+-+++|+.+|+.. +|+||+++++.|-..+.+|+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q---~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLWV 347 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ---PKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELWV 347 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC---CchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeEE
Confidence 4557788899999999999999999999999999976653 3456789999999998 59999999999998899999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||++||+|.+.+. ..++|..+..+..+++.||.|||.+||||||||.+|||++.+|.+|
T Consensus 348 VMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vK 409 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVK 409 (550)
T ss_pred EEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEE
Confidence 999999999999998 7799999999999999999999999999999999999999999886
No 122
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.79 E-value=1.7e-19 Score=201.56 Aligned_cols=132 Identities=16% Similarity=0.203 Sum_probs=117.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----- 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~----- 843 (908)
--|..-+.||+|+||.||+++++.+|+.+|+|.+++.. .....+...+|+++|++++ |||||++++.-.+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLn-h~NIVk~f~iee~~~~~~~~ 89 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLN-HPNIVKLFDIEETKFLGLVT 89 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcC-chhhhhhcccCCccccCccc
Confidence 34666788999999999999999999999999988755 2335678899999999997 999999998765543
Q ss_pred -eEEEEEecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 844 -HAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 844 -~~~iv~e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
...++||||.||+|...|+ ..+++.....+...+..||.|||++||+||||||.|||+-.
T Consensus 90 ~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~ 155 (732)
T KOG4250|consen 90 RLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQI 155 (732)
T ss_pred ccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEee
Confidence 4579999999999999998 56999999999999999999999999999999999999854
No 123
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.3e-19 Score=186.53 Aligned_cols=135 Identities=13% Similarity=0.187 Sum_probs=119.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-----CCeE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-----SMHA 845 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-----~~~~ 845 (908)
|..++.||+|+||.|+.+.++.+|+.||+|.+... +...-..++..+|+.+|+.++ |+||+.+++.+.. -+.+
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~-HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLR-HENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhc-CCCcceEEeeccccccccccee
Confidence 44479999999999999999999999999988643 233445678999999999996 9999999988865 3579
Q ss_pred EEEEecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+|+|+| +.+|.+.++ +. +++..+++++.|++.||.|+|+.+|+||||||.|+|++.+..+|
T Consensus 102 YiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lK 165 (359)
T KOG0660|consen 102 YLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLK 165 (359)
T ss_pred EEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEE
Confidence 9999999 679999998 44 99999999999999999999999999999999999999887664
No 124
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.79 E-value=1.6e-19 Score=195.86 Aligned_cols=142 Identities=17% Similarity=0.242 Sum_probs=128.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-----cchHHHHHHHHHHHHhcC--CCCccceeeeee
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-----LGKEVQVLKEKNLMKSVS--PSACVPQILCTC 839 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-----~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~ 839 (908)
++.+|..++.||.|+||.|++|.++.....|++|.+.|..+.. ......+-.|+.||..++ .|+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 5788999999999999999999999999999999999877542 334455788999999994 389999999999
Q ss_pred ccCCeEEEEEecC-CCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 840 ADSMHAGLLLNTY-LACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 840 ~~~~~~~iv~e~~-~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++.||+||-. +|-+|++++. ..++|.+++.|++|++.|+++||+.||||||||-+|++++.+|.+|
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~k 710 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVK 710 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEE
Confidence 9999999999965 6679999998 7899999999999999999999999999999999999999999875
No 125
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.79 E-value=6.2e-19 Score=188.31 Aligned_cols=135 Identities=19% Similarity=0.281 Sum_probs=122.6
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++++.||+|+||.||++.+..+++.||+|++........ ......+|..+++.+ .||+|+++++++.+....|++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~ 78 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVME 78 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccc-ccccccccccccccccccccccc
Confidence 7899999999999999999999999999999987654333 223345699999999 59999999999999999999999
Q ss_pred cCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
++.+++|.+++. +.+++..+..++.|++.||.+||++||+|+||||+|||++.+|.+
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~ 137 (260)
T PF00069_consen 79 YCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEV 137 (260)
T ss_dssp EETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999997 889999999999999999999999999999999999999988865
No 126
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.79 E-value=8.9e-19 Score=192.64 Aligned_cols=138 Identities=16% Similarity=0.213 Sum_probs=121.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++++|++.+.||+|+||.||+++++.+++.+|+|.++.... ......+.+|+.+++.++ ||||+++++++...+..|
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 80 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIVHTDKSLT 80 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCC-CCCcceEEEEEeeCCeEE
Confidence 46889999999999999999999999999999999875432 223345778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++ +|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~k 144 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELK 144 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 99999975 8888876 4589999999999999999999999999999999999999988764
No 127
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.79 E-value=3.7e-19 Score=199.45 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=123.1
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
....+++|++++.||+|+||.||++.+..+++.||+|++.... .......+.+|+.+++.++ |+||+++++++...+
T Consensus 69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~ 145 (353)
T PLN00034 69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVN-HPNVVKCHDMFDHNG 145 (353)
T ss_pred CCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCC-CCCcceeeeEeccCC
Confidence 4456789999999999999999999999999999999986432 2233467889999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+.+++|... ...++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 146 ~~~lv~e~~~~~~L~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k 208 (353)
T PLN00034 146 EIQVLLEFMDGGSLEGT--HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVK 208 (353)
T ss_pred eEEEEEecCCCCccccc--ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEE
Confidence 99999999999998654 3457788889999999999999999999999999999999988765
No 128
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.79 E-value=8.2e-19 Score=192.41 Aligned_cols=140 Identities=11% Similarity=0.165 Sum_probs=119.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC----------------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD----------------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~----------------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~ 829 (908)
+..++|++.+.||+|+||.||+|.+.. ++..+|+|++.... .......+.+|+.++..++ |
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h 78 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLK-D 78 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcC-C
Confidence 345789999999999999999998532 33479999886532 1224557889999999995 9
Q ss_pred CccceeeeeeccCCeEEEEEecCCCCcHHHHHc-C--------------------CCCHHHHHHHHHHHHHHHHHHHhCC
Q 002560 830 ACVPQILCTCADSMHAGLLLNTYLACPLASILH-T--------------------PLDEQSARFCAASVVAALEDLHKRG 888 (908)
Q Consensus 830 ~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-~--------------------~l~~~~~~~~~~qi~~aL~~LH~~g 888 (908)
|||+++++++.+.+..|++|||+++++|.+++. . .++...+..++.||+.||.|||++|
T Consensus 79 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 158 (304)
T cd05096 79 PNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN 158 (304)
T ss_pred CCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999999999999885 1 2566788999999999999999999
Q ss_pred cEecCCCCCcEEEcCCCccC
Q 002560 889 VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 889 IiHrDIKp~NILi~~~g~vK 908 (908)
|+||||||+|||++.+|.+|
T Consensus 159 ivH~dlkp~Nill~~~~~~k 178 (304)
T cd05096 159 FVHRDLATRNCLVGENLTIK 178 (304)
T ss_pred ccccCcchhheEEcCCccEE
Confidence 99999999999999988764
No 129
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.79 E-value=9.4e-19 Score=187.93 Aligned_cols=140 Identities=17% Similarity=0.222 Sum_probs=125.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|+||.||++++..+++.+|+|.+.............+.+|+.+++.++ ||+++++++.+.+.+..|+
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN-HPNVIKYLDSFIEDNELNI 79 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC-CcceeeeeeeEEECCeEEE
Confidence 468999999999999999999999999999999887644444455667889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~ 146 (267)
T cd08228 80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEE
Confidence 999999999998874 3489999999999999999999999999999999999999888653
No 130
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.79 E-value=1.4e-18 Score=190.63 Aligned_cols=139 Identities=24% Similarity=0.370 Sum_probs=126.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.|++|.+.+...........+.+|+.+++.++ ||||+++++.+....++|++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE-NPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEecCCEEEEE
Confidence 47999999999999999999999999999999988765444445567889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++|++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~ 141 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIK 141 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEE
Confidence 99999999999997 6789999999999999999999999999999999999999988764
No 131
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.79 E-value=2e-20 Score=187.58 Aligned_cols=146 Identities=18% Similarity=0.239 Sum_probs=133.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceee
Q 002560 757 SIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQIL 836 (908)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~ 836 (908)
..+.+++++..-+-|.++.+||+|+||.||++.++.+|+.+|+|.+.... ..+.+..|+.||+++ ++|+++++|
T Consensus 21 KLd~~sL~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC-~S~yVVKYY 94 (502)
T KOG0574|consen 21 KLDSSALNKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQC-KSKYVVKYY 94 (502)
T ss_pred ccChhhhcCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHc-CCchhhhhh
Confidence 35566777777788999999999999999999999999999999876543 567899999999998 599999999
Q ss_pred eeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 837 CTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 837 ~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.|-....+|||||||-.|++.++++ +++++.++..++...+.||+|||...-||||||..|||++.+|+.|
T Consensus 95 GSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AK 169 (502)
T KOG0574|consen 95 GSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAK 169 (502)
T ss_pred hhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhh
Confidence 99999999999999999999999997 7899999999999999999999999999999999999999999876
No 132
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.79 E-value=1.1e-18 Score=194.46 Aligned_cols=136 Identities=11% Similarity=0.205 Sum_probs=118.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----Ce
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----MH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~~ 844 (908)
.|++.+.||+|+||.||++.+..++..||+|.+.... ........+.+|+.+++.++ ||||+++++++... ..
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLR-HPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCC-CCCEeeecceEeccCCCCCce
Confidence 4899999999999999999999999999999886432 22233456889999999995 99999999876432 35
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+. ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 143 (338)
T cd07859 79 IYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLK 143 (338)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEE
Confidence 899999994 68999887 6799999999999999999999999999999999999999998765
No 133
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.78 E-value=5.8e-19 Score=199.09 Aligned_cols=141 Identities=11% Similarity=0.144 Sum_probs=121.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|.+..+ +..||+|++..... ......+.+|+.+++.+..|+||+++++.+.
T Consensus 35 ~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 35 FPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH--TDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC--HHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 4567899999999999999999986443 35799999875432 2235678899999999856999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHcC---------------------------------------------------------
Q 002560 841 DSMHAGLLLNTYLACPLASILHT--------------------------------------------------------- 863 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~~--------------------------------------------------------- 863 (908)
....+|++|||+++|+|.+++..
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 99999999999999999998741
Q ss_pred ---------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 ---------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 ---------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++..+..++.||+.||.|||++||+||||||+|||+++++.+|
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~k 252 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAK 252 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEE
Confidence 367788999999999999999999999999999999999887654
No 134
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.78 E-value=5.3e-19 Score=199.58 Aligned_cols=141 Identities=11% Similarity=0.139 Sum_probs=120.9
Q ss_pred ccccceEEEEEecCCCeEEEEEEEE-----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLL-----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~-----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||+|++ ..++..+|+|+++.... ......+.+|+.++..+.+||||+++++.+.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~ 109 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH--LTEREALMSELKVLSYLGNHINIVNLLGACT 109 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC--cHHHHHHHHHHHHHHHhcCCcceeeeeeeec
Confidence 4566899999999999999999974 34567899999864332 2234578899999999966999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc-C--------------------------------------------------------
Q 002560 841 DSMHAGLLLNTYLACPLASILH-T-------------------------------------------------------- 863 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~-~-------------------------------------------------------- 863 (908)
+....|+||||+++|+|.+++. .
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 9999999999999999999885 1
Q ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 --------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 --------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~k 254 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITK 254 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEE
Confidence 367788899999999999999999999999999999999877653
No 135
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.78 E-value=1e-18 Score=193.83 Aligned_cols=133 Identities=11% Similarity=0.161 Sum_probs=118.2
Q ss_pred EEEEecCC--CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 773 WRKCLYST--DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 773 ~~~~LG~G--~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
++++||+| +|+.||++.++.+++.||+|.+...... ......+.+|+.+++.++ ||||+++++++..++..|+|||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e 79 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTS 79 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEECCEEEEEEe
Confidence 46789999 7899999999999999999998765432 234556788999999985 9999999999999999999999
Q ss_pred cCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|+++++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+
T Consensus 80 ~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~ 140 (327)
T cd08227 80 FMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKV 140 (327)
T ss_pred ccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcE
Confidence 999999999985 458999999999999999999999999999999999999988765
No 136
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.78 E-value=1.2e-18 Score=186.21 Aligned_cols=138 Identities=24% Similarity=0.431 Sum_probs=127.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||+|.+..+++.+|+|++.+...........+.+|+.++++++ ||||++++..+.+....|++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 79 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN-HPFLVNLWYSFQDEENMYLVV 79 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC-CCChHHHHHhhcCCCeEEEEE
Confidence 5899999999999999999999999999999998766555456778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+.|++|..++. ..+++..+..++.|++.||.|||++|++|+||||+||++++++.+|
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~ 140 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVH 140 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEE
Confidence 9999999999997 4799999999999999999999999999999999999999988764
No 137
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.78 E-value=1.6e-18 Score=194.84 Aligned_cols=139 Identities=16% Similarity=0.215 Sum_probs=120.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC---
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--- 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--- 843 (908)
-+++|++.+.||+|+||.||++.+..+++.+|+|++.+.. ........+.+|+.+++.++ ||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVN-HKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCC-CCCEeeeeeeeccCCCcc
Confidence 4688999999999999999999999999999999987543 22334567789999999995 999999999886543
Q ss_pred ---eEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 ---HAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ---~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+.+ +|.+.+...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~k 163 (359)
T cd07876 97 EFQDVYLVMELMDA-NLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 163 (359)
T ss_pred ccceeEEEEeCCCc-CHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 57999999964 67777777789999999999999999999999999999999999999998765
No 138
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.78 E-value=2.7e-18 Score=184.22 Aligned_cols=139 Identities=16% Similarity=0.223 Sum_probs=125.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.++............+.+|+.+++.++ |++++++++.+.+.+..|++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~-~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD-HPNVIKYLASFIENNELNIV 80 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC-CCCeeeeeeeeecCCeEEEE
Confidence 68999999999999999999999999999999987655444455678899999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. ..+++..+..++.+++.||.|||++||+||||||+||+++.+|.+|
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~ 146 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEE
Confidence 99999999999884 3489999999999999999999999999999999999999888764
No 139
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.78 E-value=2.3e-18 Score=189.90 Aligned_cols=139 Identities=27% Similarity=0.422 Sum_probs=126.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.+|+|.+.+...........+..|+.++..+. ||+|+++++.+.+....|++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD-HPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC-CCCchhheeeeecCCEEEEE
Confidence 47999999999999999999999999999999998765544445667899999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+.+++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+|||++.+|.+|
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~ 143 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIM 143 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEE
Confidence 99999999999986 4689999999999999999999999999999999999999888653
No 140
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.78 E-value=2.7e-18 Score=188.65 Aligned_cols=137 Identities=15% Similarity=0.184 Sum_probs=123.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+.+++.++ ||||+++++.+.+.+++|++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECN-SPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEeeCCEEEEE
Confidence 47999999999999999999999999999999876432 1223456889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.|++.||.|||+ ++|+||||||+|||++.+|.+|
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~ 140 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIK 140 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEE
Confidence 99999999999997 678999999999999999999997 5999999999999999988664
No 141
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.78 E-value=2.3e-18 Score=200.38 Aligned_cols=138 Identities=10% Similarity=0.054 Sum_probs=121.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
....|.+.+.||+|+||.||++....+ +..+|+|.+... .......+.+|+.+++.++ ||||+++++.+...+++
T Consensus 65 ~~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~-Hpniv~~~~~~~~~~~~ 140 (478)
T PTZ00267 65 REHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACD-HFGIVKHFDDFKSDDKL 140 (478)
T ss_pred cceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCC-CCCEeEEEEEEEECCEE
Confidence 344599999999999999999998877 778898876432 2334456788999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||++||+|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~k 209 (478)
T PTZ00267 141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIK 209 (478)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEE
Confidence 99999999999998774 3589999999999999999999999999999999999999998765
No 142
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.77 E-value=1.4e-18 Score=196.16 Aligned_cols=136 Identities=17% Similarity=0.180 Sum_probs=119.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----e
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-----H 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-----~ 844 (908)
+|++.+.||+|+||.||++.+..+++.||+|.+.... ........+.+|+.+++.++ ||||+++++.+.... .
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF-QNLVSCKRVFRELKMLCFFK-HDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc-cchHHHHHHHHHHHHHHhCC-CCCcCCHhheecCCCccccce
Confidence 5888999999999999999999999999999886432 22234467889999999995 999999999988776 8
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+. ++|..++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~k 143 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK 143 (372)
T ss_pred EEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEE
Confidence 999999996 57888776 6799999999999999999999999999999999999999988765
No 143
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.77 E-value=2.8e-18 Score=187.86 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=122.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++++|++.+.||.|+||.||++.+..+++.+|+|.+..... ......+.+|+.+++.++ ||||+++++.+.+....|
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~nI~~~~~~~~~~~~~~ 80 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLK-HANIVTLHDIIHTEKSLT 80 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcC-CCCcceEEEEEecCCeEE
Confidence 57889999999999999999999999999999999865432 223345778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+. ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~k 144 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELK 144 (301)
T ss_pred EEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEE
Confidence 9999996 58888876 5689999999999999999999999999999999999999988764
No 144
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.77 E-value=2.4e-18 Score=184.76 Aligned_cols=139 Identities=14% Similarity=0.158 Sum_probs=124.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
....+|++.+.||+|+||.||++.+..+++.+|+|++.... ......+.+|+.+++.++ ||+|+++++.+......
T Consensus 6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~-h~~ii~~~~~~~~~~~~ 81 (267)
T cd06646 6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECK-HCNIVAYFGSYLSREKL 81 (267)
T ss_pred CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcC-CCCeeeeeEEEEeCCEE
Confidence 34678999999999999999999999999999999986432 123456788999999985 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 82 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~ 146 (267)
T cd06646 82 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVK 146 (267)
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEE
Confidence 99999999999999886 6789999999999999999999999999999999999999888664
No 145
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=1.6e-18 Score=191.86 Aligned_cols=135 Identities=19% Similarity=0.251 Sum_probs=118.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-eEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-HAGL 847 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-~~~i 847 (908)
++|.--..||+|+||.||++..... ..+|||.+....... ...|.+|+.++.+++ |||+++++++|.+.+ ..++
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~-H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG---EREFLNEVEILSRLR-HPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcc---hhHHHHHHHHHhcCC-CcCcccEEEEEecCCceEEE
Confidence 6777778999999999999987644 899999776543211 445999999999996 999999999999888 5999
Q ss_pred EEecCCCCcHHHHHc---C-CCCHHHHHHHHHHHHHHHHHHHhCC---cEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---T-PLDEQSARFCAASVVAALEDLHKRG---VLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~-~l~~~~~~~~~~qi~~aL~~LH~~g---IiHrDIKp~NILi~~~g~vK 908 (908)
|+||+++|+|.++|. . .+++.....|+.+++.||+|||... ||||||||+|||+|++.+.|
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999999999999998 3 7899999999999999999999854 99999999999999988765
No 146
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.77 E-value=1.4e-18 Score=186.59 Aligned_cols=140 Identities=17% Similarity=0.218 Sum_probs=125.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|+||.||++.+..+++.+|+|.+.+...........+.+|+.+++.+. ||||+++++.+...+..|+
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~ 79 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNI 79 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc-CCchhhhhheeEeCCeEEE
Confidence 467999999999999999999999999999999887655444445567889999999994 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~ 146 (267)
T cd08229 80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVK 146 (267)
T ss_pred EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEE
Confidence 999999999999875 4589999999999999999999999999999999999999888764
No 147
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.77 E-value=3.4e-18 Score=182.45 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=120.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+.++|++.+.||+|+||.||++.++ .+..+|+|.+..... ....+.+|+.+++.++ ||+|+++++++.+....|
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 75 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLS-HPKLVQLYGVCTQQKPLY 75 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCC-CCCceeEEEEEccCCCEE
Confidence 4678999999999999999999875 456799998764332 2356788999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 76 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05114 76 IVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVK 140 (256)
T ss_pred EEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEE
Confidence 9999999999999986 4589999999999999999999999999999999999999887654
No 148
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.77 E-value=2e-18 Score=195.72 Aligned_cols=140 Identities=13% Similarity=0.127 Sum_probs=120.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||+|.+... +..+|+|++.... .....+.+.+|+.+++.+..||||+++++++.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 467899999999999999999987533 3479999986542 223456789999999999669999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHcC----------------------------------------------------------
Q 002560 842 SMHAGLLLNTYLACPLASILHT---------------------------------------------------------- 863 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~~---------------------------------------------------------- 863 (908)
....|||||||++|+|.+++..
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 9999999999999999988751
Q ss_pred ----------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 864 ----------------------------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 864 ----------------------------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
.+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence 2667778899999999999999999999999999999998
Q ss_pred CCccC
Q 002560 904 SGHLQ 908 (908)
Q Consensus 904 ~g~vK 908 (908)
++.+|
T Consensus 273 ~~~~k 277 (400)
T cd05105 273 GKIVK 277 (400)
T ss_pred CCEEE
Confidence 87654
No 149
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.77 E-value=5e-19 Score=194.11 Aligned_cols=150 Identities=11% Similarity=0.122 Sum_probs=132.2
Q ss_pred CCCccccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCcc
Q 002560 753 KPAKSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV 832 (908)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i 832 (908)
++....+....-.+..+++.+...||+|.||+||++++.. .||||++........ +.+.|.+|+.++++-+ |.||
T Consensus 376 ~~r~~s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTR-H~NI 450 (678)
T KOG0193|consen 376 KNRQASDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTR-HENI 450 (678)
T ss_pred ccccCCccccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHH-HHHHHHHHHHHHhhcc-hhhh
Confidence 3444445556667888999999999999999999999865 499999987665444 8889999999999975 9999
Q ss_pred ceeeeeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 833 PQILCTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 833 ~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+-+++++..... .||+.+|+|.+|+.+|+ .+|.....+.|+.||++|+.|||.++|||||||..||++.+++.||
T Consensus 451 lLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVk 528 (678)
T KOG0193|consen 451 LLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVK 528 (678)
T ss_pred eeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEE
Confidence 999999988776 99999999999999998 6799999999999999999999999999999999999999988775
No 150
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.77 E-value=5.3e-18 Score=180.81 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=121.7
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..+++.+|+|.++.... ....+.+.+|..+++.++ |||++++++.+.+.+++|++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS--SSAVEDSRKEAVLLAKMK-HPNIVAFKESFEADGHLYIVM 77 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc--hHHHHHHHHHHHHHHhCC-CCCcceEEEEEEECCEEEEEE
Confidence 58999999999999999999999999999998864332 224567788999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||+++++.++
T Consensus 78 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~ 140 (255)
T cd08219 78 EYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVK 140 (255)
T ss_pred eeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEE
Confidence 9999999999885 4589999999999999999999999999999999999999887653
No 151
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.77 E-value=1.1e-18 Score=171.77 Aligned_cols=139 Identities=19% Similarity=0.187 Sum_probs=122.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc---
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--- 841 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--- 841 (908)
.++-+.|++.+.||+|+|+.||+|+...+++.||+|++.... .+..+..++|++..++++ |||++++++....
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~-s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFN-SPNVLRLVDHQLREEK 92 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhC-CcchHHHHHHHHHhhc
Confidence 455677999999999999999999999999999999886554 345778999999999996 8999999876533
Q ss_pred --CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcCCCcc
Q 002560 842 --SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 842 --~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~~g~v 907 (908)
....|++++|+..|+|.+.++ ..+++..+..|+.+++.||++||+.. ++||||||.|||+.++|..
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~ 168 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLP 168 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCce
Confidence 345999999999999999986 36999999999999999999999999 9999999999999987754
No 152
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.77 E-value=3.2e-18 Score=183.90 Aligned_cols=139 Identities=9% Similarity=0.081 Sum_probs=121.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
...+|++.+.||+|+||.||++.++.++. .+|+|.++.... ......+.+|+.+++.+. ||||+++++.+...+
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 78 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSK 78 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCC-CCCcceEEEEEecCC
Confidence 45789999999999999999998865443 799998865331 224567889999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+++++|.+++. +.++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~ 146 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCK 146 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEE
Confidence 9999999999999999997 4689999999999999999999999999999999999999887654
No 153
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.77 E-value=1.8e-18 Score=185.36 Aligned_cols=131 Identities=14% Similarity=0.215 Sum_probs=117.4
Q ss_pred eEEE--EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 771 MEWR--KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 771 ~~~~--~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
|++. +.||+|.||.||-+.++++|+.+|+|++.|-.+... +...+.+|+.||+.+ +||.|+.+...|+..+.+|+|
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-qesqlR~EVaILq~l-~HPGiV~le~M~ET~ervFVV 641 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-QESQLRNEVAILQNL-HHPGIVNLECMFETPERVFVV 641 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCc-hHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceEEEE
Confidence 5553 789999999999999999999999999998776543 568899999999999 599999999999999999999
Q ss_pred EecCCCCcHHHHH-c---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 849 LNTYLACPLASIL-H---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 849 ~e~~~gg~L~~~l-~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
||-+.| ++.+++ . +++++...++++.||+.||.|||-++|+|.||||||||+.+.
T Consensus 642 MEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~ 700 (888)
T KOG4236|consen 642 MEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA 700 (888)
T ss_pred ehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC
Confidence 999965 555544 4 889999999999999999999999999999999999999753
No 154
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.77 E-value=3.9e-18 Score=185.75 Aligned_cols=138 Identities=17% Similarity=0.210 Sum_probs=122.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.+++|++.+.||+|+||.||++.++.+++.||+|.+..... ......+.+|+.+++.++ ||+|+++++++.+..+.|
T Consensus 3 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 79 (291)
T cd07844 3 KLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLK-HANIVTLHDIIHTKKTLT 79 (291)
T ss_pred CccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCC-CcceeeEEEEEecCCeEE
Confidence 46889999999999999999999998999999999865432 122345678999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||||+.+ +|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~k 143 (291)
T cd07844 80 LVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELK 143 (291)
T ss_pred EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEE
Confidence 99999975 8999886 4689999999999999999999999999999999999999988764
No 155
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.77 E-value=4.9e-18 Score=182.34 Aligned_cols=139 Identities=9% Similarity=0.072 Sum_probs=122.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC---CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
..++|++.+.||+|+||.||++.++.+ ...+|+|.++... .......+.+|+.+++.++ ||+|+++++.+....
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 78 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFD-HPNIIRLEGVVTKSR 78 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCC-CCCcceEeEEEecCC
Confidence 467899999999999999999988654 4589999876543 2234456888999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~ 146 (266)
T cd05033 79 PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCK 146 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEE
Confidence 9999999999999999986 4689999999999999999999999999999999999999988654
No 156
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.77 E-value=4.3e-18 Score=182.34 Aligned_cols=139 Identities=16% Similarity=0.157 Sum_probs=124.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc--cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC--LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~--~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
++|++.+.||+|++|.||.+.+..+++.+|+|.+....... ......+.+|+.+++.++ ||+|+++++.+.+...+|
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 80 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ-HERIVQYYGCLRDDETLS 80 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC-CCCeeeeEEEEccCCeEE
Confidence 57999999999999999999999999999999986543221 223457888999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..++.++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 81 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~ 144 (263)
T cd06625 81 IFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVK 144 (263)
T ss_pred EEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 9999999999999987 6789999999999999999999999999999999999999988764
No 157
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.76 E-value=3.7e-18 Score=188.36 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=120.0
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
-+...+|++.+.||+|+||.||++.+..++. .+|+|++.... .......+.+|+.+++.+. ||||+++++.+.
T Consensus 3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~~~g~~~ 79 (316)
T cd05108 3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVD-NPHVCRLLGICL 79 (316)
T ss_pred ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCCCCeEEEEEc
Confidence 4567889999999999999999999876655 48999876432 2234557889999999995 999999999887
Q ss_pred cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.. ..+++++|+++|+|.+++. ..++...+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~k 149 (316)
T cd05108 80 TS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVK 149 (316)
T ss_pred CC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEE
Confidence 64 5789999999999999997 3588999999999999999999999999999999999999888764
No 158
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.76 E-value=5.3e-18 Score=182.41 Aligned_cols=139 Identities=10% Similarity=0.100 Sum_probs=122.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
.+++|++.+.||+|+||.||++.++.+++ .+|+|++.... .......+..|+.+++.+. ||||+++++.+.+..
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~ 78 (269)
T cd05065 2 DVSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFD-HPNIIHLEGVVTKSR 78 (269)
T ss_pred ChHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CcCcceEEEEECCCC
Confidence 46789999999999999999999877665 69999986532 2334567899999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+++++|.+++. +.++...++.++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~k 146 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCK 146 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEE
Confidence 9999999999999999987 5589999999999999999999999999999999999999887654
No 159
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=3.7e-18 Score=198.91 Aligned_cols=140 Identities=12% Similarity=0.087 Sum_probs=121.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC---
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--- 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--- 843 (908)
.-++|++.+.||+|+||.||++++..+++.||+|++...... ......+.+|+.++..+. |+++++++..+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~-h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCD-FFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCC-CCcEEEeecceecccccC
Confidence 457899999999999999999999999999999998765432 234566788999999985 999999887664322
Q ss_pred -----eEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 -----HAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 -----~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++||||+++|+|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEE
Confidence 4789999999999999885 3689999999999999999999999999999999999999988765
No 160
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.76 E-value=3.4e-18 Score=181.92 Aligned_cols=131 Identities=12% Similarity=0.166 Sum_probs=116.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++.++.+++.+|+|.+.... .......+.+|+.+++.++ ||||+++++.+......|+||||+++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 77 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQPIYIVMELVQG 77 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCC-CCCcceEEEEEcCCCCeEEEEeeccC
Confidence 36899999999999999999999999875432 2234567889999999995 99999999999999999999999999
Q ss_pred CcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 78 ~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~k 134 (252)
T cd05084 78 GDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLK 134 (252)
T ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEE
Confidence 99999986 3589999999999999999999999999999999999999988764
No 161
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.76 E-value=5.4e-18 Score=181.75 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=124.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+...+|.+.+.||+|+||.||++.+..+++.+|+|.+.... .....+.+|+.+++.++ ||+|+++++.+.....+
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~----~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 77 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPF 77 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc----hHHHHHHHHHHHHHhCC-CCChhheEEEEcCCCCc
Confidence 45678999999999999999999999999999999886432 23456888999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||+++++.+|
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k 144 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVK 144 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEE
Confidence 99999999999999986 3589999999999999999999999999999999999999888764
No 162
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.76 E-value=5.5e-18 Score=184.46 Aligned_cols=138 Identities=15% Similarity=0.236 Sum_probs=114.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECC-CCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeec-----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRD-SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCA----- 840 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~-~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~----- 840 (908)
++|++.+.||+|+||.||+|++.. +++.+|+|.+...... ........+|..+++.+. .||||+++++.+.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 469999999999999999999864 4678999988654322 223345667888877763 4999999998874
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....+|++|||+. ++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~k 150 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIK 150 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEE
Confidence 3457999999996 68998886 4589999999999999999999999999999999999999988764
No 163
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.76 E-value=5.3e-18 Score=182.98 Aligned_cols=140 Identities=14% Similarity=0.202 Sum_probs=121.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++++.||+|+||.||+++.+.+ .+.+++|.+.... .......+.+|+.+++.+. ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~ 78 (275)
T cd05046 2 FPRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLS-HKNVVRLLGLCR 78 (275)
T ss_pred CChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcC-CcceeeeEEEEC
Confidence 3457899999999999999999997643 4578999875432 1123567889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C---------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T---------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~---------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+....|++|||+++++|.+++. . .+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~ 157 (275)
T cd05046 79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVK 157 (275)
T ss_pred CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEE
Confidence 9999999999999999999997 3 589999999999999999999999999999999999999988764
No 164
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.76 E-value=1e-18 Score=186.70 Aligned_cols=135 Identities=19% Similarity=0.174 Sum_probs=123.5
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.+.+.||+|.|..|-++++.-||..||+|++.|..+... ...+++.|++.|+.+ +||||+++|.+......+|+|+|
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLV-QHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLV-QHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHh-cCcCeeeeeehhcccceEEEEEE
Confidence 7888999999999999999999999999999999876543 456899999999998 59999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCcc
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~v 907 (908)
+-.+|+|+++|- ..+.+..++.|++||+.|+.|+|...++||||||+|+.+-+ -|.+
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlV 158 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLV 158 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCce
Confidence 999999999986 77999999999999999999999999999999999998864 3444
No 165
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.76 E-value=5.2e-18 Score=184.00 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=121.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+++++|++.+.||+|+||.||++.+. .++..+++|.+.... .......+.+|..+++.+. ||||+++++.+..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~ 78 (283)
T cd05090 2 LPLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELH-HPNIVCLLGVVTQ 78 (283)
T ss_pred CChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCC-CCCeeeEEEEEec
Confidence 56789999999999999999999853 355789999886432 2223457888999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc-------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 842 SMHAGLLLNTYLACPLASILH-------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 999999999999999999984 1367888999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
.++.+|
T Consensus 159 ~~~~~k 164 (283)
T cd05090 159 EQLHVK 164 (283)
T ss_pred CCCcEE
Confidence 887664
No 166
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.76 E-value=4e-18 Score=191.29 Aligned_cols=139 Identities=16% Similarity=0.211 Sum_probs=120.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS---- 842 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~---- 842 (908)
-+++|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||||+++++.+...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~ 92 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVN-HKNIISLLNVFTPQKSLE 92 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc-ChHHHHHHHHHHHHHHHhC-CCchhceeeeeecccccc
Confidence 46789999999999999999999999999999999865432 2234567788999999985 99999999987543
Q ss_pred --CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 --MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 --~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+.+ +|.+.+...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 93 ~~~~~~lv~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~k 159 (355)
T cd07874 93 EFQDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 159 (355)
T ss_pred ccceeEEEhhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEE
Confidence 357999999964 77777777799999999999999999999999999999999999999988765
No 167
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.76 E-value=7.2e-18 Score=182.93 Aligned_cols=136 Identities=14% Similarity=0.163 Sum_probs=120.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++ ||+++++++.+.++...|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQ-HPNIVCLQDVLMQESRLYLIF 78 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcC-CCCEeeeEEEEeeCCeEEEEE
Confidence 58999999999999999999999999999999865432 2233456788999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++ ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~ 141 (285)
T cd07861 79 EFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIK 141 (285)
T ss_pred ecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEE
Confidence 9997 58888875 4589999999999999999999999999999999999999988764
No 168
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.76 E-value=3.3e-18 Score=191.05 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=120.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.+.|++++.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+.+++.++ ||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ-SLIHARRTYRELRLLKHMK-HENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh-hhHHHHHHHHHHHHHHhcC-CCchhhhhhhhcccccccc
Confidence 4679999999999999999999999999999999875432 2223456778999999995 99999999877543
Q ss_pred -CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|+++ +++|..++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~k 158 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELR 158 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEE
Confidence 4579999988 789999887 7899999999999999999999999999999999999999988765
No 169
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.76 E-value=4.8e-18 Score=183.64 Aligned_cols=140 Identities=24% Similarity=0.344 Sum_probs=128.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++.+..+++.+|+|++.+...........+..|..+++.+..||||+++++.+.+.+..|++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998766555555677889999999995599999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++++++|.+++. +.+++..+..++.|++.||.|||++|++|+||||+||+++.+|.+|
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~ 142 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIK 142 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEE
Confidence 99999999999998 5799999999999999999999999999999999999999988764
No 170
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.76 E-value=2.9e-18 Score=190.65 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=122.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCc---e-EEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSEN---F-LSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~-~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
-++..+.++||+|+||.||++..+..+. . ||+|...........+...+++|.++|++++ ||||+++|++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~-H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN-HPNVVRFYGVAVLEE 234 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCC
Confidence 3455666999999999999998865422 3 8999887544445567889999999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|||+|+||+|.++|+ +.++..+...++.+.+.||+|||++++|||||-..|+|++.++.+|
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEE
Confidence 9999999999999999998 3599999999999999999999999999999999999999987754
No 171
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.76 E-value=7.9e-18 Score=182.62 Aligned_cols=137 Identities=12% Similarity=0.215 Sum_probs=118.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEE----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--c
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLL----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--D 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~ 841 (908)
-++|++.+.||+|+||.||++.. ..++..+|+|.+.... ......+.+|+.+++.++ ||||+++++.+. +
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~ 78 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAG 78 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCC-CCCeeEEEEEEccCC
Confidence 35799999999999999999974 4568899999976432 234567889999999995 999999988754 3
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~ 148 (284)
T cd05081 79 RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVK 148 (284)
T ss_pred CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEE
Confidence 457899999999999999986 4589999999999999999999999999999999999999988764
No 172
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.76 E-value=3.6e-18 Score=190.66 Aligned_cols=141 Identities=11% Similarity=0.111 Sum_probs=118.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
++.++|++.+.||+|+||.||+|.+. .+++.||+|+++.... ......+.+|+.++..+.+||||+++++.+.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 34578999999999999999999853 4577999999865331 2234578899999999977999999998775
Q ss_pred c-CCeEEEEEecCCCCcHHHHHc-C-------------------------------------------------------
Q 002560 841 D-SMHAGLLLNTYLACPLASILH-T------------------------------------------------------- 863 (908)
Q Consensus 841 ~-~~~~~iv~e~~~gg~L~~~l~-~------------------------------------------------------- 863 (908)
. ...+|++|||+++|+|.+++. .
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 457899999999999999885 1
Q ss_pred -------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 -------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 -------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~k 219 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVK 219 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEE
Confidence 256777888999999999999999999999999999999888764
No 173
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.76 E-value=7.1e-18 Score=182.55 Aligned_cols=135 Identities=14% Similarity=0.161 Sum_probs=120.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|++.+.. .......+.+|+.+++.++ ||+|+++++.+...+..+++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCD-SPYIIGFYGAFFVENRISIC 77 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCC-CCCeeeEEEEEEECCEEEEE
Confidence 47899999999999999999999999999999986542 1223457889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..+ ..+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 78 ~e~~~~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~ 135 (279)
T cd06619 78 TEFMDGGSLDVY--RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVK 135 (279)
T ss_pred EecCCCCChHHh--hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEE
Confidence 999999998655 4678999999999999999999999999999999999999988764
No 174
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.76 E-value=8.3e-18 Score=183.78 Aligned_cols=137 Identities=14% Similarity=0.159 Sum_probs=124.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
..+|++.+.||.|+||.||++.+..+++.+|+|.+..... ...+.+.+|..+++.+ +||+++++++.+....+.|+
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEEE
Confidence 3789999999999999999999999999999999865432 2345678899999998 59999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 94 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~ 155 (297)
T cd06656 94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVK 155 (297)
T ss_pred eecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 999999999999997 7789999999999999999999999999999999999999888764
No 175
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.76 E-value=7.9e-18 Score=183.23 Aligned_cols=139 Identities=22% Similarity=0.335 Sum_probs=123.6
Q ss_pred ceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhh-ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVK-CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+|++.+.||.|+||.||+|.+. .+++.||+|++...... .....+++.+|+.++..+.+|++|++++..+......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 5889999999999999999875 47889999998765432 2334567888999999997799999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~k 145 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 145 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999999987 6789999999999999999999999999999999999999988764
No 176
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.76 E-value=1.2e-17 Score=178.13 Aligned_cols=137 Identities=15% Similarity=0.222 Sum_probs=123.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|.+.+.||+|+||.||++.+..+++.+++|.+...... ......+.+|+.+++.++ |||++++++.+.+.+..|++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLD-SSYIIRYYESFLDKGKLNIVM 78 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcC-CCCeehheeeeccCCEEEEEE
Confidence 588999999999999999999999999999998764433 334567889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+|
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~ 141 (256)
T cd08529 79 EYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVK 141 (256)
T ss_pred EeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEE
Confidence 9999999999986 4688999999999999999999999999999999999999888654
No 177
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.76 E-value=4.1e-18 Score=181.91 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=120.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+..+|++.+.||+|+||.||++.++ ++..+|+|++.+... ....+.+|+.+++.+. ||+|+++++.+......|
T Consensus 2 ~~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05059 2 DPSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLS-HPNLVQLYGVCTKQRPIF 75 (256)
T ss_pred ChHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCC-CCCEEEEEEEEcCCCceE
Confidence 4567999999999999999999886 466899998764332 2346778999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~k 140 (256)
T cd05059 76 IVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVK 140 (256)
T ss_pred EEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEE
Confidence 9999999999999986 4689999999999999999999999999999999999999988764
No 178
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.75 E-value=6.6e-18 Score=183.58 Aligned_cols=137 Identities=16% Similarity=0.228 Sum_probs=115.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeecc-----C
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCAD-----S 842 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~-----~ 842 (908)
.|++.+.||+|+||.||+|+++.+++.+|+|.++..... ......+.+|+.+++.+. .||||+++++++.+ .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 489999999999999999999999999999998754322 222334567777777663 49999999988754 3
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..++++|||+. ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~k 148 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVK 148 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 56899999997 48888886 3489999999999999999999999999999999999999988764
No 179
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.75 E-value=1e-17 Score=181.85 Aligned_cols=138 Identities=13% Similarity=0.154 Sum_probs=122.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.++.+++.+|+|++..... .......+.+|+.+++.++ |||++++++.+......|++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLK-HPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCC-CCCEeeeeeEEeeCCEEEEE
Confidence 469999999999999999999999999999998865432 1223346788999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.|..++. ..+++..++.++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~ 140 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIK 140 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEE
Confidence 99999998888876 5799999999999999999999999999999999999999988764
No 180
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.75 E-value=1.5e-17 Score=177.93 Aligned_cols=137 Identities=13% Similarity=0.173 Sum_probs=124.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||.|+||.||++.+..+++.+++|++..... .....+.+|+.+++.++ ||+|+++++.+.+...+|+
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 77 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECR-HPNIVAYFGSYLRRDKLWI 77 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCC-CCChhceEEEEEeCCEEEE
Confidence 3689999999999999999999998999999999875432 24567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~ 141 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVK 141 (262)
T ss_pred EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEE
Confidence 999999999999986 5799999999999999999999999999999999999999988764
No 181
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.75 E-value=8.3e-18 Score=179.57 Aligned_cols=136 Identities=13% Similarity=0.169 Sum_probs=120.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+.++|++.+.||+|+||.||++.+.. +..+|+|.+..... ....+.+|+.+++.+. ||+|+++++++......|
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 75 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLS-HEKLVQLYGVCTKQRPIY 75 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCC-CCCeeeEEEEEccCCCcE
Confidence 56789999999999999999998754 44699998764432 2356889999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+.+++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.+|
T Consensus 76 lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~k 140 (256)
T cd05113 76 IVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVK 140 (256)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEE
Confidence 9999999999999986 4689999999999999999999999999999999999999888764
No 182
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.75 E-value=7.7e-18 Score=184.05 Aligned_cols=139 Identities=9% Similarity=0.136 Sum_probs=119.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+++|++.+.||+|+||.||++....++. .+++|.++... .....+.+.+|+.++.++.+||+|+++++.+......
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 3689999999999999999999877765 46888765321 2223456888999999996699999999999999999
Q ss_pred EEEEecCCCCcHHHHHc-C-----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 846 GLLLNTYLACPLASILH-T-----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~-----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|++|||+++++|.+++. . .+++..++.++.|++.||+|||++||+||||||+|||++.++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 99999999999999986 1 37888999999999999999999999999999999999988765
Q ss_pred C
Q 002560 908 Q 908 (908)
Q Consensus 908 K 908 (908)
|
T Consensus 159 k 159 (297)
T cd05089 159 K 159 (297)
T ss_pred E
Confidence 4
No 183
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.75 E-value=3.2e-18 Score=183.91 Aligned_cols=138 Identities=16% Similarity=0.198 Sum_probs=123.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++.+.||+|+||.||++++..+++.+|+|.++... ......+.+|+.+++.++ ||+|+++++.+...+..|
T Consensus 7 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~-h~~ii~~~~~~~~~~~~~ 82 (267)
T cd06645 7 PQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCK-HSNIVAYFGSYLRRDKLW 82 (267)
T ss_pred cHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCC-CCCeeeEEEEEEeCCEEE
Confidence 3468999999999999999999999999999999986543 123345778999999984 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~ 146 (267)
T cd06645 83 ICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVK 146 (267)
T ss_pred EEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9999999999999987 7799999999999999999999999999999999999999888654
No 184
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.75 E-value=1.2e-17 Score=179.32 Aligned_cols=139 Identities=15% Similarity=0.159 Sum_probs=121.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~ 844 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.+...... .......+.+|+.+++.+ +||+|+++++.+.+ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~ 80 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERT 80 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCce
Confidence 6899999999999999999999999999999987543211 123456788899999999 49999999998876 357
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 81 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~ 146 (265)
T cd06652 81 LSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVK 146 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEE
Confidence 899999999999999986 6689999999999999999999999999999999999999888654
No 185
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.75 E-value=8e-18 Score=189.53 Aligned_cols=139 Identities=15% Similarity=0.208 Sum_probs=120.2
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS---- 842 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~---- 842 (908)
-+++|++.+.||+|+||.||++.+..+++.+|+|++.+.. ........+.+|+.+++.++ ||||+++++.+...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVN-HKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcC-CCCccccceeeccccccc
Confidence 3678999999999999999999999999999999987543 22334567788999999985 99999999877543
Q ss_pred --CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 --MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 --~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+|+||||+. ++|..++...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~k 166 (364)
T cd07875 100 EFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166 (364)
T ss_pred ccCeEEEEEeCCC-CCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEE
Confidence 45799999996 478887777789999999999999999999999999999999999999988764
No 186
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.75 E-value=4.1e-18 Score=184.42 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=123.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
-++|++.+.||.|+||.||++.+..++..+|+|.+.... ......+..|+.+++.++ ||+|+++++.+.+....|+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES---EEELEDFMVEIDILSECK-HPNIVGLYEAYFYENKLWI 79 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC---HHHHHHHHHHHHHHHhCC-CCceeEEEEEEecCCeEEE
Confidence 356999999999999999999998899999999986432 234567888999999996 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|..++. ..+++..++.++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~ 143 (280)
T cd06611 80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVK 143 (280)
T ss_pred EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEE
Confidence 999999999999986 5699999999999999999999999999999999999999887654
No 187
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.75 E-value=8.1e-18 Score=184.83 Aligned_cols=141 Identities=13% Similarity=0.146 Sum_probs=121.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~ 838 (908)
+..++|.+.+.||+|+||.||++.+.. +...+|+|.+.... .......+..|+.+++.+..||+|+++++.
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 345789999999999999999998643 23479999887542 223345688899999999669999999999
Q ss_pred eccCCeEEEEEecCCCCcHHHHHc-C-----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEE
Q 002560 839 CADSMHAGLLLNTYLACPLASILH-T-----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900 (908)
Q Consensus 839 ~~~~~~~~iv~e~~~gg~L~~~l~-~-----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NIL 900 (908)
+...+..|++|||+++++|.+++. . .++...+..++.|++.||+|||++|++||||||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 999999999999999999999996 1 3788899999999999999999999999999999999
Q ss_pred EcCCCccC
Q 002560 901 LDKSGHLQ 908 (908)
Q Consensus 901 i~~~g~vK 908 (908)
++.++.+|
T Consensus 173 l~~~~~~k 180 (307)
T cd05098 173 VTEDNVMK 180 (307)
T ss_pred EcCCCcEE
Confidence 99888764
No 188
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.75 E-value=8.3e-18 Score=182.02 Aligned_cols=133 Identities=21% Similarity=0.322 Sum_probs=112.7
Q ss_pred EecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc--CCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV--SPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l--~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+..+++.+|+|.+.+.............+|..++..+ .+||+++.++..+...+..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999999999999999998765543332333344555444443 358999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~ 137 (279)
T cd05633 81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 137 (279)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEE
Confidence 999999886 6799999999999999999999999999999999999999888654
No 189
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.75 E-value=9.2e-18 Score=183.48 Aligned_cols=137 Identities=17% Similarity=0.228 Sum_probs=122.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+|++.+.||+|+||.||++.+..+++.+|+|.+...... .......+..|+.+++.++ |++|+++++++.+.+..|+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK-HPNIIGLLDVFGHKSNINL 79 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC-CCCChhhhheeecCCEEEE
Confidence 488899999999999999999999999999998765533 1223456778999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+ +++|.+++. . .+++..+..++.||+.||.|||++||+|+||||+|||++.+|.+|
T Consensus 80 v~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~ 142 (298)
T cd07841 80 VFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLK 142 (298)
T ss_pred EEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEE
Confidence 99999 899999997 3 699999999999999999999999999999999999999988764
No 190
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.75 E-value=9e-18 Score=181.51 Aligned_cols=131 Identities=23% Similarity=0.365 Sum_probs=118.2
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|+||.||+|.+..+++.+|+|.+.+...........+..|+.+++.++ ||+|+++++.+...+..|++|||+++++
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS-SRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC-CCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 689999999999999999999999987765444445566788999999995 9999999999999999999999999999
Q ss_pred HHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. . .+++..+..++.|++.||.|||++|++||||+|+||+++.++.+|
T Consensus 80 L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~ 135 (277)
T cd05577 80 LKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVR 135 (277)
T ss_pred HHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 999986 3 699999999999999999999999999999999999999988654
No 191
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.75 E-value=9.7e-18 Score=179.45 Aligned_cols=137 Identities=11% Similarity=0.126 Sum_probs=121.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++++.||+|+||.||++... .+..+|+|.+..... ..+.+.+|+.+++.++ |++|+++++.+.+....
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 76 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPI 76 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch----hHHHHHHHHHHHHhCC-CCCeeeEEEEEcCCCCc
Confidence 56789999999999999999999865 556799998764322 3457889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++......++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~ 143 (261)
T cd05072 77 YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCK 143 (261)
T ss_pred EEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEE
Confidence 99999999999999986 4578889999999999999999999999999999999999988653
No 192
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.75 E-value=1.3e-17 Score=182.12 Aligned_cols=137 Identities=14% Similarity=0.162 Sum_probs=123.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
..+|++.+.||.|+||.||++.+..+++.+++|.+..... .....+.+|+.+++.+. |||++++++.+....+.|+
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~-h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENK-NPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCC-CCCEeeEEEEEEeCCEEEE
Confidence 3689999999999999999999999999999998875442 23466889999999984 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 95 v~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~k 156 (296)
T cd06654 95 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK 156 (296)
T ss_pred eecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEE
Confidence 999999999999998 6789999999999999999999999999999999999999888654
No 193
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.75 E-value=1.2e-17 Score=200.71 Aligned_cols=136 Identities=19% Similarity=0.226 Sum_probs=119.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SM 843 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~ 843 (908)
..+++|++++.||.|+||.||+|++..++..+|+|++...... ......+..|+.+++.+. ||+|++++++|.+ ..
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~-HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELK-HKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcC-CCCcCeEEEEEEecCCC
Confidence 4578999999999999999999999999999999998755432 234567889999999995 9999999998844 46
Q ss_pred eEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC-------CcEecCCCCCcEEEcC
Q 002560 844 HAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKR-------GVLYRGVSPDVLMLDK 903 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~-------gIiHrDIKp~NILi~~ 903 (908)
.+||||||+++++|.++|. ..+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s 160 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLST 160 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeec
Confidence 7999999999999999885 4699999999999999999999984 4999999999999975
No 194
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.75 E-value=5.7e-18 Score=191.87 Aligned_cols=142 Identities=12% Similarity=0.142 Sum_probs=120.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.+..++|.+.+.||+|+||.||+|++. .+++.+|+|+++.... ......+.+|+.+|..+..||||+++++.+
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~--~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR--SSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC--hhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 456778999999999999999999864 3456899999875432 223456889999999996699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc-C-------------------------------------------------------
Q 002560 840 ADSMHAGLLLNTYLACPLASILH-T------------------------------------------------------- 863 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~-~------------------------------------------------------- 863 (908)
.....+|+||||+++|+|.++++ .
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 99999999999999999999985 1
Q ss_pred --------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcE
Q 002560 864 --------------------------------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899 (908)
Q Consensus 864 --------------------------------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NI 899 (908)
.++...+..++.|++.||.|||++||+||||||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 245667788999999999999999999999999999
Q ss_pred EEcCCCccC
Q 002560 900 MLDKSGHLQ 908 (908)
Q Consensus 900 Li~~~g~vK 908 (908)
|+++++.+|
T Consensus 271 Ll~~~~~~k 279 (401)
T cd05107 271 LICEGKLVK 279 (401)
T ss_pred EEeCCCEEE
Confidence 999887654
No 195
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.75 E-value=8.3e-18 Score=183.56 Aligned_cols=140 Identities=12% Similarity=0.196 Sum_probs=122.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCC----------------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSE----------------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS 829 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~----------------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~ 829 (908)
+..++|++++.||+|+||.||++.+...+ ..+|+|.+...... .....+.+|+.+++.++ |
T Consensus 2 ~~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~-~ 78 (296)
T cd05051 2 FPRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLS-D 78 (296)
T ss_pred CchhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcC-C
Confidence 34678999999999999999999876544 45799988754322 34567889999999995 9
Q ss_pred CccceeeeeeccCCeEEEEEecCCCCcHHHHHc--C-----------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCC
Q 002560 830 ACVPQILCTCADSMHAGLLLNTYLACPLASILH--T-----------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSP 896 (908)
Q Consensus 830 ~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~--~-----------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp 896 (908)
|+|+++++++......+++|||+++++|.+++. . .+++..+..++.|++.||.|||++||+||||||
T Consensus 79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp 158 (296)
T cd05051 79 PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLAT 158 (296)
T ss_pred CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccch
Confidence 999999999999999999999999999999986 3 589999999999999999999999999999999
Q ss_pred CcEEEcCCCccC
Q 002560 897 DVLMLDKSGHLQ 908 (908)
Q Consensus 897 ~NILi~~~g~vK 908 (908)
+||+++.++.+|
T Consensus 159 ~Nili~~~~~~~ 170 (296)
T cd05051 159 RNCLVGKNYTIK 170 (296)
T ss_pred hceeecCCCceE
Confidence 999999887653
No 196
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.75 E-value=1.3e-17 Score=181.14 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=120.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-----cc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-----AD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-----~~ 841 (908)
..++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+.+|..+++.+.+||||+++++.+ ..
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 3578999999999999999999999999999999876432 12346778999999986699999999876 34
Q ss_pred CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....|++|||+++++|.+++. ..+++..+..++.|++.||.|||+++|+||||||+||+++.+|.+|
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEE
Confidence 567999999999999998864 4688999999999999999999999999999999999999988664
No 197
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.75 E-value=1.2e-18 Score=176.28 Aligned_cols=139 Identities=15% Similarity=0.193 Sum_probs=118.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD- 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~- 841 (908)
.+..|+.++.||+|+||.||++..++++. .||+|.++...- ..+......+|+.+++.++ |||++.+...|-.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~-h~nvi~Lv~Vfl~~ 99 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELK-HPNVISLVKVFLSH 99 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhc-CCcchhHHHHHhcc
Confidence 46789999999999999999997665533 789998865432 2344567889999999995 9999999988876
Q ss_pred CCeEEEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC----CccC
Q 002560 842 SMHAGLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS----GHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~----g~vK 908 (908)
+..+|+++||.+. +|+.+++ +.++...++.+++||+.|+.|||++=|+||||||.|||+..+ |.+|
T Consensus 100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VK 176 (438)
T KOG0666|consen 100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVK 176 (438)
T ss_pred CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeE
Confidence 7899999999965 9999986 458999999999999999999999999999999999999988 6654
No 198
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.75 E-value=1.3e-17 Score=177.90 Aligned_cols=136 Identities=11% Similarity=0.124 Sum_probs=122.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
++.++|++.+.||.|+||.||++... ++.+|+|.+..... ...++.+|..+++.++ |++|+++++.+.+....
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 75 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST----AAQAFLAEASVMTTLR-HPNLVQLLGVVLQGNPL 75 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh----HHHHHHHHHHHHHhcC-CcceeeeEEEEcCCCCe
Confidence 35788999999999999999999874 78899999865432 4567889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. . .+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~ 142 (256)
T cd05039 76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAK 142 (256)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEE
Confidence 99999999999999997 2 689999999999999999999999999999999999999888654
No 199
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.75 E-value=1.1e-17 Score=182.44 Aligned_cols=136 Identities=11% Similarity=0.122 Sum_probs=122.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|++++.||.|+||.||++++..++..+++|++.... ......+.+|+.+++.++ |||++++++.+......|++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYMVEIEILATCN-HPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC---HHHHHHHHHHHHHHHhCC-CCcEeeeEEEEEeCCeEEEE
Confidence 55999999999999999999999999999999986542 234567888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~k 150 (292)
T cd06644 88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIK 150 (292)
T ss_pred EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEE
Confidence 99999999988875 5689999999999999999999999999999999999999888764
No 200
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.75 E-value=8.7e-18 Score=188.52 Aligned_cols=131 Identities=18% Similarity=0.186 Sum_probs=116.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
...+|++++.||+|+||.||++.+..+++.+|+|+..+. ....|..+++.++ ||||+++++++......|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~ 133 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVN-HPSVIRMKDTLVSGAITC 133 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCC-CCCCcChhheEEeCCeeE
Confidence 345799999999999999999999999999999975432 2346889999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||++. ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 134 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~k 197 (357)
T PHA03209 134 MVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVC 197 (357)
T ss_pred EEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9999995 68888875 5789999999999999999999999999999999999999888764
No 201
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.75 E-value=5.2e-18 Score=184.27 Aligned_cols=137 Identities=16% Similarity=0.171 Sum_probs=122.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++++.||+|+||.||++.+..+++.+|+|.+.... .......+.+|+.+++.++ ||||+++++.+...++.|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAV-SPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcC-CCcHHhhhhheecCCeEEEE
Confidence 47899999999999999999999999999999886432 2223467889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILHT-----PLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~~-----~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++.. .+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+|
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~ 143 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVK 143 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEE
Confidence 999999999999873 79999999999999999999997 5999999999999999988764
No 202
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.74 E-value=1.3e-17 Score=191.95 Aligned_cols=133 Identities=11% Similarity=0.126 Sum_probs=111.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD----- 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~----- 841 (908)
...+|++.+.||+|+||.||+|.+..+++.+|+|.+.... ....+|+.+++.++ ||||++++++|..
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~-h~niv~l~~~~~~~~~~~ 135 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLN-HINIIFLKDYYYTECFKK 135 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcC-CCCCcceeeeEeeccccc
Confidence 4567999999999999999999999999999999875432 12346999999995 9999999877632
Q ss_pred ---CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC-ccC
Q 002560 842 ---SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HLQ 908 (908)
Q Consensus 842 ---~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g-~vK 908 (908)
..++|++|||+++ +|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vk 211 (440)
T PTZ00036 136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLK 211 (440)
T ss_pred CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCcee
Confidence 2357899999975 6766653 5689999999999999999999999999999999999999665 343
No 203
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.74 E-value=1.3e-17 Score=181.32 Aligned_cols=139 Identities=9% Similarity=0.134 Sum_probs=121.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+...+|.+.+.||+|+||.||++... .++..+|+|.+.... ......+.+|+.+++.+. ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 77 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQ-HEHIVKFYGVCV 77 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCC-CCCcceEEEEEe
Confidence 45678999999999999999999853 345578999876532 223557889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C-------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T-------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~-------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
.....|++|||+++++|.+++. + .+++..+..++.|++.||.|||++||+||||||+|||+++++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 78 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 157 (288)
T ss_pred cCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999999999999999986 2 389999999999999999999999999999999999999988
Q ss_pred ccC
Q 002560 906 HLQ 908 (908)
Q Consensus 906 ~vK 908 (908)
.+|
T Consensus 158 ~~k 160 (288)
T cd05093 158 LVK 160 (288)
T ss_pred cEE
Confidence 764
No 204
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.74 E-value=9.4e-18 Score=181.88 Aligned_cols=140 Identities=14% Similarity=0.171 Sum_probs=121.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCC-----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSE-----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~-----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+.+++|++.+.||+|+||.||++.....+ ..+|+|.+.... .......+.+|+.++..+. ||+|+++++++.
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~ 78 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQ-HPNIVCLLGVCT 78 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcC-CcccceEEEEEc
Confidence 56789999999999999999999876554 689999876432 2234456889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
+....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 9999999999999999999986 2367888999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
+++.+|
T Consensus 159 ~~~~~~ 164 (283)
T cd05048 159 EGLTVK 164 (283)
T ss_pred CCCcEE
Confidence 988654
No 205
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.74 E-value=1.4e-17 Score=181.48 Aligned_cols=142 Identities=11% Similarity=0.132 Sum_probs=122.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCC-----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSE-----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~-----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.+..++|++.+.||+|+||.||++...... ..+|+|.+..... ......+.+|+.++..+.+|+||+++++.+
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 85 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVC 85 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 456678999999999999999999876443 6899998865421 223456889999999985699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 840 ADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.....+|++|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus 86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV 165 (293)
T ss_pred cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence 99999999999999999999984 357889999999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
+.+|.+|
T Consensus 166 ~~~~~~k 172 (293)
T cd05053 166 TEDHVMK 172 (293)
T ss_pred cCCCeEE
Confidence 9988764
No 206
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.74 E-value=2.1e-18 Score=188.64 Aligned_cols=138 Identities=13% Similarity=0.169 Sum_probs=122.2
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+..+.+++++.||+|-||.||++.+.. ...+|+|.++.... ..+.+.+|+.+|++|+ |++|+++++++.....
T Consensus 202 ei~r~~l~l~~~LG~G~FG~V~~g~~~~-~~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~-H~~lV~l~gV~~~~~p 275 (468)
T KOG0197|consen 202 EIPREELKLIRELGSGQFGEVWLGKWNG-STKVAVKTIKEGSM----SPEAFLREAQIMKKLR-HEKLVKLYGVCTKQEP 275 (468)
T ss_pred eecHHHHHHHHHhcCCccceEEEEEEcC-CCcccceEEecccc----ChhHHHHHHHHHHhCc-ccCeEEEEEEEecCCc
Confidence 3455667888999999999999999853 34789998865432 3457889999999996 9999999999999889
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||||||++.|+|.++|+ ..++......++.||++|++||+++++|||||-..||||++++.+|
T Consensus 276 iyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vK 343 (468)
T KOG0197|consen 276 IYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVK 343 (468)
T ss_pred eEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEE
Confidence 999999999999999998 5689999999999999999999999999999999999999998876
No 207
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.74 E-value=1.1e-18 Score=175.63 Aligned_cols=129 Identities=14% Similarity=0.131 Sum_probs=114.1
Q ss_pred ccceEEE-EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec----cC
Q 002560 768 LTDMEWR-KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA----DS 842 (908)
Q Consensus 768 ~~~~~~~-~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~----~~ 842 (908)
.++|.+- ++||-|-.|.|..|.++.|++.||+|++... ....+|+++....+.||||+.+++.|. ..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4566664 5799999999999999999999999987543 256689999888889999999998775 45
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
.++.+|||+++||+|+..++ +.|+|.++..|+.||..|+.|||+.+|.||||||||+|....
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t 197 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT 197 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC
Confidence 78899999999999999997 569999999999999999999999999999999999998754
No 208
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.74 E-value=2e-17 Score=176.46 Aligned_cols=137 Identities=14% Similarity=0.150 Sum_probs=123.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++++.||.|+||.||+++...+++.+++|.+...... ......+.+|+.+++.++ |+||+++++.+.+...++++|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~~~~ 78 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQ-HPNIIAYYNHFMDDNTLLIEM 78 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCC-CCCeeEEEeEEecCCeEEEEE
Confidence 589999999999999999999999999999988654422 234557889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+|
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~k 141 (256)
T cd08221 79 EYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIK 141 (256)
T ss_pred EecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEE
Confidence 9999999999997 3589999999999999999999999999999999999999988764
No 209
>PHA02988 hypothetical protein; Provisional
Probab=99.74 E-value=1.2e-17 Score=181.08 Aligned_cols=145 Identities=14% Similarity=0.104 Sum_probs=123.0
Q ss_pred cccccccccceEEE--EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee
Q 002560 761 SSLAKVSLTDMEWR--KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 761 ~~~~~~~~~~~~~~--~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~ 838 (908)
.+...++.++++.. ..||+|++|.||++.. +++.+|+|.+++.........+.+.+|+.+|.+++ ||||++++++
T Consensus 10 ~~~~~i~~~~i~~~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~~~g~ 86 (283)
T PHA02988 10 NDIKCIESDDIDKYTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID-SNNILKIYGF 86 (283)
T ss_pred CcceecCHHHcCCCCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC-CCCEEEEeee
Confidence 34445566666665 6799999999999987 68899999987654333333567889999999995 9999999998
Q ss_pred ecc----CCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 839 CAD----SMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 839 ~~~----~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.+ ...++++|||+++|+|.+++. +.+++.....++.+++.||.|||+ .+++||||||+|||++++|.+|
T Consensus 87 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~k 163 (283)
T PHA02988 87 IIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLK 163 (283)
T ss_pred EEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEE
Confidence 866 457899999999999999997 678999999999999999999998 4999999999999999998765
No 210
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.74 E-value=2.4e-17 Score=175.93 Aligned_cols=137 Identities=13% Similarity=0.148 Sum_probs=119.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-CCeEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-SMHAGLL 848 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-~~~~~iv 848 (908)
+|++.+.||+|++|.||++.++.+++.+|+|.+...... ......+.+|..+++.++ |++++++++.+.. ...+|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~lv 78 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-RRERKAAEQEAQLLSQLK-HPNIVAYRESWEGEDGLLYIV 78 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-HHHHHHHHHHHHHHHhCC-CCCeeeeeeeecCCCCEEEEE
Confidence 589999999999999999999999999999998654322 224456888999999995 9999999988764 4578999
Q ss_pred EecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~ 142 (257)
T cd08223 79 MGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIK 142 (257)
T ss_pred ecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEE
Confidence 99999999999986 4589999999999999999999999999999999999999888654
No 211
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.74 E-value=5.7e-18 Score=181.20 Aligned_cols=137 Identities=13% Similarity=0.127 Sum_probs=122.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
...+|++.+.||.|+||.||++.+.. +..+++|++..... .....+..|+.+++.++ ||+|+++++.+.+....|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL---LKQQDFQKEVQALKRLR-HKHLISLFAVCSVGEPVY 78 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch---hhHHHHHHHHHHHhcCC-CcchhheeeeEecCCCeE
Confidence 34679999999999999999999987 88999999876442 23456788999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~k 144 (261)
T cd05148 79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCK 144 (261)
T ss_pred EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEE
Confidence 9999999999999997 4589999999999999999999999999999999999999988664
No 212
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.74 E-value=1.3e-17 Score=178.38 Aligned_cols=134 Identities=24% Similarity=0.360 Sum_probs=116.6
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||.|+||.||+|.+..+++.+|+|++++...........+..|..++....+||+++++++.+...+..|++|||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999999999999999987655433333445566666665554699999999999999999999999999
Q ss_pred CcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. +.+++..+..++.|++.||.|||++||+||||+|+||+++.++.+|
T Consensus 82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~ 137 (260)
T cd05611 82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLK 137 (260)
T ss_pred CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEE
Confidence 99999997 6789999999999999999999999999999999999999887654
No 213
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.74 E-value=1.8e-17 Score=179.39 Aligned_cols=139 Identities=14% Similarity=0.162 Sum_probs=119.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
++.++|++.+.||+|+||.||++.+..+++ .||+|++.... .......+.+|..++..+. ||||+++++.+..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~ 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVG-SPYVCRLLGICLT 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcC-CCCCceEEEEEcC
Confidence 467889999999999999999999877766 48999876432 2223567888999999984 9999999988865
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+++|+|+++|+|.+++. +.+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~k 149 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVK 149 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEE
Confidence 45789999999999999996 4689999999999999999999999999999999999999887664
No 214
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.74 E-value=1.1e-17 Score=181.69 Aligned_cols=138 Identities=12% Similarity=0.180 Sum_probs=123.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||+|.+..+++.+|+|.+.+..... .....+.+|+.+++.++ ||+|+++++.+.+....|++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLR-HENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcC-CcchhhHHHhcccCCeEEEE
Confidence 47999999999999999999999899999999876543222 34556788999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.|..+.. ..+++..+..++.|++.||.|||++||+|+||+|+||++++++.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~ 140 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVK 140 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEE
Confidence 99999999988776 5689999999999999999999999999999999999999988764
No 215
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.74 E-value=6.2e-19 Score=170.93 Aligned_cols=131 Identities=16% Similarity=0.232 Sum_probs=116.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
..++|++.+++|+|.|+.||.+.+..+++.+++|+++.-. ...+.+|+.||..|+++|||+++++...+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH------HHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 5688999999999999999999999999999999986543 457889999999999999999999998765 45
Q ss_pred EEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
..+++||+.+.+...+. ..++...++.|+.+++.||.|+|++||+|||+||.|+|||..
T Consensus 110 paLiFE~v~n~Dfk~ly-~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~ 168 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLY-PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHE 168 (338)
T ss_pred chhHhhhhccccHHHHh-hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechh
Confidence 67999999887776654 578899999999999999999999999999999999999964
No 216
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.74 E-value=1.4e-17 Score=191.06 Aligned_cols=130 Identities=15% Similarity=0.160 Sum_probs=116.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
...|.+.+.||+|+||.||++.+..+++.+|+|... ...+.+|+.+|+.++ |+||+++++++......|+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~-HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLS-HPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCC-CCCCCcEEEEEEECCEEEE
Confidence 457999999999999999999999999999999532 123568999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+++. ++|..++. ..+++..++.++.|++.||.|||++||+||||||+||||+.++.+|
T Consensus 238 v~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vk 300 (461)
T PHA03211 238 VLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDIC 300 (461)
T ss_pred EEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEE
Confidence 999995 68888875 4699999999999999999999999999999999999999888764
No 217
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.74 E-value=1.3e-17 Score=179.12 Aligned_cols=136 Identities=15% Similarity=0.168 Sum_probs=121.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc---cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC---LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~---~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+|+..+.||+|+||.||++.+..+++.+|+|.+....... ......+.+|+.+++.++ |++|+++++.+.+.++.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 79 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN-HPHIIRMLGATCEDSHFN 79 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC-CCceehhhceeccCCeEE
Confidence 4788899999999999999999999999999987543211 223567889999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++|++|+||||+||+++.+|.
T Consensus 80 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~ 141 (268)
T cd06630 80 LFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ 141 (268)
T ss_pred EEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC
Confidence 9999999999999997 67899999999999999999999999999999999999987763
No 218
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.74 E-value=1.3e-17 Score=178.99 Aligned_cols=138 Identities=18% Similarity=0.263 Sum_probs=122.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc------cchHHHHHHHHHHHHhcCCCCccceeeeeeccCC
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC------LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM 843 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~------~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~ 843 (908)
.|.+.+.||.|+||.||++.+..+++.+|+|.+....... ....+.+.+|+.+++.+. ||+|+++++.+....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~ 79 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ-HENIVQYLGSSLDAD 79 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC-CCCeeeEEEEEEeCC
Confidence 3778899999999999999998899999999886543221 123456889999999995 999999999999999
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.|++|||+++++|.+++. +.+++..+..++.|++.||.|||++|++||||||+||++++++.+|
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 80 HLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEE
Confidence 9999999999999999997 6789999999999999999999999999999999999999888654
No 219
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.74 E-value=2e-17 Score=177.09 Aligned_cols=137 Identities=14% Similarity=0.149 Sum_probs=121.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+. +++.+|+|.++.... ....+.+|+.+++.++ ||||+++++++...+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 76 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLR-HPKLIQLYAVCTLEEPI 76 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCC-CCCccceeEEEecCCCe
Confidence 45678999999999999999999875 456899999865432 2456888999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~ 143 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICK 143 (261)
T ss_pred eeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEE
Confidence 99999999999999996 2589999999999999999999999999999999999999988764
No 220
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.74 E-value=2e-17 Score=178.23 Aligned_cols=138 Identities=18% Similarity=0.213 Sum_probs=121.3
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-------cchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-------LGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-------~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.|.+.+.||.|+||.||++.+..+++.+|+|.+....... ....+.+..|..+++.++ ||+++++++.+...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD-HLNIVQYLGFETTE 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC-CCCcceEEEEeccC
Confidence 4788899999999999999999899999999876432211 112356788999999995 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...++||||+++++|.+++. +.+++..++.++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~ 148 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICK 148 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEE
Confidence 99999999999999999997 6789999999999999999999999999999999999999888654
No 221
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.74 E-value=1e-17 Score=182.86 Aligned_cols=139 Identities=11% Similarity=0.155 Sum_probs=119.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCC--------------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCcc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSE--------------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACV 832 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~--------------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i 832 (908)
..++|++.+.||+|+||.||+|++..++ ..+|+|.++... .......+.+|+.+++.++ ||++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~-h~~i 79 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLK-NPNI 79 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCC-CCCc
Confidence 4568999999999999999999875432 358999886532 2234557889999999995 9999
Q ss_pred ceeeeeeccCCeEEEEEecCCCCcHHHHHc-C-------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCc
Q 002560 833 PQILCTCADSMHAGLLLNTYLACPLASILH-T-------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898 (908)
Q Consensus 833 ~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-~-------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~N 898 (908)
+++++.+......|++|||+++++|.+++. . .+++..+..++.|++.||.|||++|++||||||+|
T Consensus 80 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N 159 (295)
T cd05097 80 IRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN 159 (295)
T ss_pred CeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh
Confidence 999999999999999999999999999985 1 26788889999999999999999999999999999
Q ss_pred EEEcCCCccC
Q 002560 899 LMLDKSGHLQ 908 (908)
Q Consensus 899 ILi~~~g~vK 908 (908)
||++.++.+|
T Consensus 160 ill~~~~~~k 169 (295)
T cd05097 160 CLVGNHYTIK 169 (295)
T ss_pred EEEcCCCcEE
Confidence 9999887654
No 222
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.74 E-value=1.5e-17 Score=182.51 Aligned_cols=142 Identities=11% Similarity=0.144 Sum_probs=121.2
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC-------CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR-------DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~-------~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
.+...+|++.+.||+|+||.||++++. ..+..+|+|.+.... .......+.+|+.+++.+.+||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 356789999999999999999999753 234579999876432 22345678899999999966999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcE
Q 002560 838 TCADSMHAGLLLNTYLACPLASILHT------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~~------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NI 899 (908)
.+......|++|||+++++|.+++.. .++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 99999999999999999999999861 367778899999999999999999999999999999
Q ss_pred EEcCCCccC
Q 002560 900 MLDKSGHLQ 908 (908)
Q Consensus 900 Li~~~g~vK 908 (908)
|++.+|.+|
T Consensus 169 li~~~~~~k 177 (304)
T cd05101 169 LVTENNVMK 177 (304)
T ss_pred EEcCCCcEE
Confidence 999888664
No 223
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.74 E-value=2.5e-17 Score=170.48 Aligned_cols=181 Identities=24% Similarity=0.285 Sum_probs=103.4
Q ss_pred EecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcC--hHHHHHHHHHHHHHHHHhcCCcchh--HHHHHHHH
Q 002560 100 LSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEF--GAQCSQFVKRKLCENLLRNNKFHED--AVDACHSS 175 (908)
Q Consensus 100 ~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~--G~~as~~~~~~l~~~l~~~~~~~~~--~~~~l~~~ 175 (908)
.|++| .+..|||++.+... ++..+++||||+|+. |+.+|+.+++.+.+.+.+....... ....++.+
T Consensus 3 ~sh~~-----~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~ 73 (212)
T PF13672_consen 3 RSHRG-----RGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAI 73 (212)
T ss_dssp ----T-----TSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred ccccC-----CCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 35667 78999999996542 455677999999986 8999999999999999877653332 22223333
Q ss_pred HHHHHHHH------HhccCCCCCCcceEEEEEEECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHH
Q 002560 176 YLTTNSQL------HADVLDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKL 249 (908)
Q Consensus 176 ~~~~~~~i------~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~ 249 (908)
...+...+ .........++||++++++.++.++++|+||||+|+..+++ ....++.+|+ .+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g---~~~~l~~~~~----~~~~~--- 143 (212)
T PF13672_consen 74 KKEILSIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNG---EIQQLTDDHS----GEYPN--- 143 (212)
T ss_dssp HHHHHHHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETT---EEEE-S---B----HHHHH---
T ss_pred HHHHHHHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCC---EEEEcCCCcc----chhhh---
Confidence 22322211 11122344579999999999999999999999998776554 2566888884 11100
Q ss_pred cCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEE
Q 002560 250 SGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFV 329 (908)
Q Consensus 250 ~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flv 329 (908)
.++.+.... .....++..+++.++|. |+
T Consensus 144 ----------------------------------------------~~~~~~~~~-----~~~~~~~~~~~~~~~d~-il 171 (212)
T PF13672_consen 144 ----------------------------------------------QTRSLTGDD-----PEPDVQYGSIPLEEGDV-IL 171 (212)
T ss_dssp ----------------------------------------------CTTSCCHHC-----CCTETEEEEEE--TT-E-EE
T ss_pred ----------------------------------------------hhhccCccc-----cccCCeEEEEEcCCCCE-EE
Confidence 011111110 11234667778888998 69
Q ss_pred EEcCccccccChHH-HHHHHhcc
Q 002560 330 LASDGVFEFLSSQA-VVDMVAKY 351 (908)
Q Consensus 330 laSDGl~d~l~~~e-i~~~v~~~ 351 (908)
|||||||+.+.+.+ +..++...
T Consensus 172 L~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 172 LCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp EE-HHHHTTS-HHHHHHHH----
T ss_pred EECcCccccCCCHHHHHHHhhhc
Confidence 99999999998655 66666543
No 224
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.74 E-value=1.3e-17 Score=180.86 Aligned_cols=136 Identities=10% Similarity=0.160 Sum_probs=117.7
Q ss_pred ceEEEEEecCCCeEEEEEEEE----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--C
Q 002560 770 DMEWRKCLYSTDCSEIGLVLL----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--M 843 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~ 843 (908)
-|++++.||+|+||.||+|.. ..++..+|+|.++... .......+.+|+.+++.+. |||++++++.+.+. .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCC-CCCeeeeeeEEecCCCC
Confidence 478899999999999999974 4567899999986432 2233457889999999995 99999999988765 6
Q ss_pred eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||++|++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~ 149 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVK 149 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEE
Confidence 7899999999999999986 3589999999999999999999999999999999999999888654
No 225
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.74 E-value=1.6e-18 Score=203.24 Aligned_cols=138 Identities=15% Similarity=0.201 Sum_probs=120.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc------
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------ 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~------ 841 (908)
+++|+.++.||+|+||.||+|+++-+|+.||||.+.... .......+.+|+.+|.+|+ ||||+++|..|..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLn-HpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLN-HPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcC-CcceeeeehhhhccCCccc
Confidence 678999999999999999999999999999999998765 3445678999999999995 9999999865510
Q ss_pred -------------------------------------------------C------------------------------
Q 002560 842 -------------------------------------------------S------------------------------ 842 (908)
Q Consensus 842 -------------------------------------------------~------------------------------ 842 (908)
.
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence 0
Q ss_pred ----------------------------------CeEEEEEecCCCCcHHHHHc-CCCC--HHHHHHHHHHHHHHHHHHH
Q 002560 843 ----------------------------------MHAGLLLNTYLACPLASILH-TPLD--EQSARFCAASVVAALEDLH 885 (908)
Q Consensus 843 ----------------------------------~~~~iv~e~~~gg~L~~~l~-~~l~--~~~~~~~~~qi~~aL~~LH 885 (908)
..+||-||||+..+|.++++ +.+. ...++.+++||++||.|+|
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH
Confidence 24789999999988888888 5554 7889999999999999999
Q ss_pred hCCcEecCCCCCcEEEcCCCccC
Q 002560 886 KRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 886 ~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||||||||.||++|+++.||
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VK 737 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVK 737 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCee
Confidence 99999999999999999999886
No 226
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.74 E-value=1.8e-17 Score=179.86 Aligned_cols=136 Identities=16% Similarity=0.247 Sum_probs=122.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||++.+..+++.+|+|++...... ......+.+|+.+++.++ ||+++++++.+.+....|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~ 78 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQ-HPYVVKLLDVFPHGSGFVLVM 78 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCC-CCCCcceeeEEecCCeeEEEe
Confidence 589999999999999999999999999999998765422 234567889999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+ +++|.+++. ..+++..++.++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 79 e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~ 139 (286)
T cd07832 79 EYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLK 139 (286)
T ss_pred ccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEE
Confidence 999 999999986 5689999999999999999999999999999999999999887653
No 227
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.74 E-value=2e-17 Score=178.73 Aligned_cols=140 Identities=14% Similarity=0.164 Sum_probs=121.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||++..+.. +..+|+|.+.... .......+.+|+.+++.++ ||+|+++++.+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~ 79 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFN-CHHVVRLLGVVS 79 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCC-CCceeEEEEEEc
Confidence 4578899999999999999999988643 3789999976443 1223456888999999985 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHcC------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILHT------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~~------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.....|++|||+++++|.+++.. .+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEE
Confidence 99999999999999999999851 257788999999999999999999999999999999999988764
No 228
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.74 E-value=1.7e-17 Score=179.78 Aligned_cols=137 Identities=15% Similarity=0.193 Sum_probs=116.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.++.+++.||+|.+++.... .....+..|..++.+..+|||++++++.+......|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS--QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc--HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 4799999999999999999999999999999998754321 12345666777655545699999999999999999999
Q ss_pred EecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++ ++|.+++. ..+++..+..++.|++.||.|||++ +++||||||+|||++.++.+|
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~k 144 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVK 144 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEE
Confidence 99996 67877764 3689999999999999999999997 999999999999999988764
No 229
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=8.4e-19 Score=190.26 Aligned_cols=136 Identities=14% Similarity=0.176 Sum_probs=124.0
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.-++.||.|+||.||.+++..+.+.||||.++-+.-.....+..++.|+..|.+++ |||++.+-++|-.....|+|||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~-HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR-HPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc-CCCcccccceeeccchHHHHHH
Confidence 666788999999999999999999999999998766556677888999999999996 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||-| +-.+++. +++-+.++..|..+.+.||.|||+++.||||||..|||+.+.|.||
T Consensus 107 YClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VK 166 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVK 166 (948)
T ss_pred HHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeee
Confidence 9964 6666665 8999999999999999999999999999999999999999999886
No 230
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.74 E-value=1.7e-17 Score=181.87 Aligned_cols=142 Identities=11% Similarity=0.112 Sum_probs=122.6
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.+..++|.+.+.||+|+||.||++.+. .++..+|+|+++.... ....+.+.+|+.+++++.+||||+++++.+
T Consensus 31 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 108 (302)
T cd05055 31 EFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH--SSEREALMSELKIMSHLGNHENIVNLLGAC 108 (302)
T ss_pred cccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC--hHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 456788999999999999999999753 3455899998765431 223457889999999995699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 840 ADSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+..|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.+|
T Consensus 109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~ 181 (302)
T cd05055 109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVK 181 (302)
T ss_pred ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEE
Confidence 99999999999999999999986 2389999999999999999999999999999999999999877653
No 231
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.74 E-value=2.1e-17 Score=179.25 Aligned_cols=135 Identities=13% Similarity=0.195 Sum_probs=116.0
Q ss_pred eEEEEEecCCCeEEEEEEEE----CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCe
Q 002560 771 MEWRKCLYSTDCSEIGLVLL----RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH 844 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~ 844 (908)
|++.+.||+|+||.||++.. ..++..+|+|.+..... ......+.+|+.+++.++ ||||+++++++.. ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLY-HENIVKYKGCCSEQGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCC-CCCEeeEEEEEecCCCce
Confidence 48899999999999988753 34677999999865421 123456788999999995 9999999987654 456
Q ss_pred EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~ 147 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVK 147 (283)
T ss_pred EEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEE
Confidence 899999999999999998 7899999999999999999999999999999999999999888664
No 232
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.74 E-value=2e-17 Score=182.23 Aligned_cols=141 Identities=13% Similarity=0.143 Sum_probs=121.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT 838 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~ 838 (908)
+..++|.+.+.||+|+||.||++++.. ....+|+|.+.... .......+..|+.+++.+.+||||++++++
T Consensus 9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (314)
T cd05099 9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGV 86 (314)
T ss_pred ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEE
Confidence 456789999999999999999998642 34578999876432 223456788999999998669999999999
Q ss_pred eccCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEE
Q 002560 839 CADSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLM 900 (908)
Q Consensus 839 ~~~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NIL 900 (908)
+.+....|++|||+++++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 166 (314)
T cd05099 87 CTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVL 166 (314)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEE
Confidence 999999999999999999999985 13788889999999999999999999999999999999
Q ss_pred EcCCCccC
Q 002560 901 LDKSGHLQ 908 (908)
Q Consensus 901 i~~~g~vK 908 (908)
++.+|.+|
T Consensus 167 l~~~~~~k 174 (314)
T cd05099 167 VTEDNVMK 174 (314)
T ss_pred EcCCCcEE
Confidence 99988764
No 233
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.74 E-value=1.1e-17 Score=181.44 Aligned_cols=136 Identities=17% Similarity=0.200 Sum_probs=120.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||+|.+..+++.+|+|.++.... .......+.+|+.+++.++ |||++++++.+.+....|+++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 78 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELK-HKNIVRLYDVLHSDKKLTLVF 78 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcC-CCCeeeHHHHhccCCceEEEE
Confidence 48899999999999999999999999999999865432 2223456778999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+. ++|.+++. +.+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~ 139 (284)
T cd07839 79 EYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELK 139 (284)
T ss_pred ecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEE
Confidence 9996 57877775 5689999999999999999999999999999999999999988764
No 234
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.74 E-value=2.4e-17 Score=177.14 Aligned_cols=140 Identities=10% Similarity=0.087 Sum_probs=122.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+..++|+..+.||+|+||.||++.++.++. .+|+|.+.... .......+..|+.++..++ |||++++++.+.+.
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~ 78 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFS-HHNIIRLEGVVTKF 78 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEccC
Confidence 456789999999999999999999876554 78999876542 1223557889999999995 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+..|++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~k 147 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECK 147 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEE
Confidence 99999999999999999986 4689999999999999999999999999999999999999887654
No 235
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.73 E-value=3e-17 Score=179.32 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=124.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
...|++.+.||.|+||.||++.+..+++.+++|.+.... ......+.+|+.+++.++ |||++++++.+......|+
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELK-NPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcC-CCceeeeeeeEecCceEEE
Confidence 356999999999999999999999999999999886533 234567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|..++. ..+++..+..++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 94 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~k 155 (296)
T cd06655 94 VMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVK 155 (296)
T ss_pred EEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 999999999999988 6799999999999999999999999999999999999999888764
No 236
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.73 E-value=2.1e-17 Score=187.79 Aligned_cols=132 Identities=17% Similarity=0.243 Sum_probs=116.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
...+|++++.||+|+||.||+|.... ++..+|+|.+.... ...+|+.+++.++ ||+|+++++.+.....
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~-h~~iv~~~~~~~~~~~ 160 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTIS-HRAIINLIHAYRWKST 160 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcC-CCCccceeeeEeeCCE
Confidence 34579999999999999999997643 45789999875432 3457999999995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++||++. ++|.+++. ..+++..++.|+.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~ 225 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAV 225 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEE
Confidence 999999995 68888886 6799999999999999999999999999999999999999988764
No 237
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.73 E-value=1e-17 Score=181.75 Aligned_cols=140 Identities=15% Similarity=0.177 Sum_probs=125.4
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
++.++|++++.||+|+||.||++.+..+++.+|+|++.... .......+.+|+.+++.++ ||+|+++++.+.+....
T Consensus 2 l~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~ 78 (284)
T cd06620 2 LRNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECR-SPYIVSFYGAFLNENNI 78 (284)
T ss_pred ccHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcC-CCCcceEeeeEecCCEE
Confidence 46788999999999999999999999999999999876432 2334567889999999995 99999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|..++. +.+++..+..++.+++.||.|||+ +||+||||||+||+++.++.+|
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~ 144 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIK 144 (284)
T ss_pred EEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEE
Confidence 99999999999999987 678999999999999999999997 6999999999999999887653
No 238
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.73 E-value=1.1e-17 Score=185.49 Aligned_cols=132 Identities=9% Similarity=0.060 Sum_probs=115.6
Q ss_pred EEecCC--CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 775 KCLYST--DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 775 ~~LG~G--~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
..||+| +||.||++++..+++.||+|++....... ...+.+.+|+.+++.++ ||||++++++|......|++|||+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~-h~niv~~~~~~~~~~~~~~v~e~~ 81 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFR-HPNIMTSWTVFTTGSWLWVISPFM 81 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCC-CCCcceEeeeEecCCceEEEEecc
Confidence 356666 99999999999999999999986543222 34567888999988885 999999999999999999999999
Q ss_pred CCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 82 ~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~ 141 (328)
T cd08226 82 AYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVS 141 (328)
T ss_pred cCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEE
Confidence 9999999987 3589999999999999999999999999999999999999887654
No 239
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.73 E-value=3.2e-17 Score=175.36 Aligned_cols=137 Identities=12% Similarity=0.168 Sum_probs=122.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+. .+..+|+|.+..... ....+.+|+.+++.++ ||+++++++.+......
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~ 76 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLR-HDKLVQLYAVCSEEEPI 76 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCC-CCCEeeeeeeeecCCce
Confidence 45788999999999999999999875 457799998875432 2356889999999996 99999999999998999
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++...+..++.|++.||.|||++||+|+||||+|||++.++.+|
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~ 143 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCK 143 (261)
T ss_pred EEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEE
Confidence 99999999999999996 3689999999999999999999999999999999999999988764
No 240
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.73 E-value=3.3e-17 Score=175.77 Aligned_cols=139 Identities=15% Similarity=0.170 Sum_probs=121.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhh--hhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQK--VKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~--~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
.+|++.+.||+|+||.||++.+..+++.+|+|.+.... .........+.+|+.+++.++ ||+|+++++.+.+. ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR-HDRIVQYYGCLRDPEEKK 80 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC-CCCcceEEEEEEcCCCCE
Confidence 57999999999999999999999999999999875422 112234567889999999995 99999999988654 56
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++|||+++++|.+++. +.+++..+..++.|++.||.|||++||+|+||||+||+++.++.+|
T Consensus 81 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~ 146 (264)
T cd06653 81 LSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVK 146 (264)
T ss_pred EEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence 899999999999999987 6689999999999999999999999999999999999999887653
No 241
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.73 E-value=2.7e-17 Score=179.50 Aligned_cols=138 Identities=18% Similarity=0.239 Sum_probs=118.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH---- 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~---- 844 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.+.... ........+.+|+.+++.+.+||+|+++++.+.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 47999999999999999999999999999999876543 2223345678899999999878999999998876655
Q ss_pred -EEEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCccC
Q 002560 845 -AGLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 845 -~~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~vK 908 (908)
.|++|||+++ +|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+|
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEE
Confidence 8999999975 7888875 24799999999999999999999999999999999999998 66543
No 242
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.73 E-value=2.1e-17 Score=176.99 Aligned_cols=131 Identities=28% Similarity=0.456 Sum_probs=120.0
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||.|+||.||+|.+..+++.+|+|++.+...........+.+|+.+++.++ ||+|+++++.+.+....|++|||+++++
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN-HPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC-CCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 699999999999999899999999998766554455678999999999995 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.+|.+|
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~ 133 (262)
T cd05572 80 LWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVK 133 (262)
T ss_pred HHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEE
Confidence 999997 5689999999999999999999999999999999999999988764
No 243
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.73 E-value=2.4e-17 Score=176.79 Aligned_cols=137 Identities=18% Similarity=0.243 Sum_probs=120.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhh---hccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKV---KCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~---~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+|++.+.||.|+||.||++.. .+++.+|+|.+..... ........+.+|+.+++.++ |+||+++++++.+....|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 78 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK-HVNIVQYLGTCLDDNTIS 78 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC-CCCEeeEeeEeecCCeEE
Confidence 588899999999999999986 4788999998764321 12234467889999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||+.||+|+||||+||+++++|.+|
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~ 142 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIK 142 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEE
Confidence 9999999999999997 6789999999999999999999999999999999999999888664
No 244
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.73 E-value=2.9e-17 Score=177.72 Aligned_cols=139 Identities=14% Similarity=0.175 Sum_probs=121.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+...+|++.+.||+|+||.||++.++.+++ .+|+|.+..... ......+.+|+.+++.++ |||++++++.+..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~ 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVD-HPHVVRLLGICLS 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCC-CCCcceEEEEEec
Confidence 456789999999999999999999876654 689998765432 234567889999999995 9999999998877
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 -~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~k 149 (279)
T cd05057 81 -SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVK 149 (279)
T ss_pred -CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEE
Confidence 78999999999999999987 4689999999999999999999999999999999999999887654
No 245
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.73 E-value=2.9e-17 Score=178.85 Aligned_cols=137 Identities=17% Similarity=0.182 Sum_probs=119.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||+|+||.||++.+..+++.+|+|.+..... ......+.+|+.+++.++ |+||+++++++.+....|+
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLK-HANIVLLHDIIHTKETLTF 80 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcC-CCCEeEEEEEEecCCeEEE
Confidence 4789999999999999999999999999999999865432 222345678999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+. ++|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~ 143 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELK 143 (291)
T ss_pred EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEE
Confidence 999995 67766664 4578889999999999999999999999999999999999888764
No 246
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.73 E-value=2.3e-17 Score=178.50 Aligned_cols=133 Identities=22% Similarity=0.326 Sum_probs=112.4
Q ss_pred EecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc--CCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV--SPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l--~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+..+++.||+|++.+..............|..+++.+ .+||+|+.++..+.+....|+||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999999999999999998765443332333344454444333 258999999999999999999999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|..++. +.+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~k 137 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 137 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEE
Confidence 999999886 6799999999999999999999999999999999999999888754
No 247
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.73 E-value=3e-17 Score=178.52 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=117.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||++..+. .+..+|+|.+.... .......+.+|..+++.+. ||+|+++++.+.+
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~ 80 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFT-CHHVVRLLGVVSK 80 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 45789999999999999999997653 24589999876433 1223446788999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc--C----------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH--T----------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~--~----------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....|++|||+++++|.+++. + .++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 999999999999999999996 1 235667889999999999999999999999999999999887654
No 248
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.73 E-value=1.3e-17 Score=180.35 Aligned_cols=140 Identities=9% Similarity=0.096 Sum_probs=121.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|.+.+.||+|+||.||++.+.. +++.+|+|.++.... ......+.+|+.+++.+. ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~ 78 (280)
T cd05049 2 VQRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQ-HENIVKFYGVCT 78 (280)
T ss_pred CChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcC-CCCchheeeEEe
Confidence 356789999999999999999998753 357899999865432 224567899999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 841 DSMHAGLLLNTYLACPLASILH----------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
.....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~ 158 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYD 158 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCC
Confidence 9999999999999999999986 136888999999999999999999999999999999999988
Q ss_pred CccC
Q 002560 905 GHLQ 908 (908)
Q Consensus 905 g~vK 908 (908)
+.+|
T Consensus 159 ~~~k 162 (280)
T cd05049 159 LVVK 162 (280)
T ss_pred CeEE
Confidence 8764
No 249
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.73 E-value=2.3e-17 Score=180.24 Aligned_cols=138 Identities=13% Similarity=0.199 Sum_probs=117.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECC----------------CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCc
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRD----------------SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~----------------~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~ 831 (908)
.++|++.+.||+|+||.||+|.+.. ++..+|+|++.... .......+.+|+.+++.++ |++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~-~~~ 80 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLK-DPN 80 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCC-CCC
Confidence 4679999999999999999986532 34478999886542 2234567889999999995 999
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHHHHcC-------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCc
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLASILHT-------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~~-------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~N 898 (908)
|+++++++......|++|||+++++|.+++.. .+++..+..++.|++.||.|||++||+||||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N 160 (296)
T cd05095 81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN 160 (296)
T ss_pred cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence 99999999999999999999999999999861 25677899999999999999999999999999999
Q ss_pred EEEcCCCccC
Q 002560 899 LMLDKSGHLQ 908 (908)
Q Consensus 899 ILi~~~g~vK 908 (908)
||++.++.+|
T Consensus 161 ili~~~~~~~ 170 (296)
T cd05095 161 CLVGKNYTIK 170 (296)
T ss_pred EEEcCCCCEE
Confidence 9999887654
No 250
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.73 E-value=2.2e-17 Score=178.97 Aligned_cols=134 Identities=13% Similarity=0.172 Sum_probs=120.7
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|+||.||++.+..++..+++|.+.... ......+.+|+.+++.+. |||++++++.+......|++||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~~v~e 82 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCD-HPNIVKLLDAFYYENNLWILIE 82 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCC-CCCeeeEEEEEeeCCEEEEEEE
Confidence 688899999999999999999999999999886433 234567888999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 83 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~k 143 (282)
T cd06643 83 FCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIK 143 (282)
T ss_pred ecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEE
Confidence 999999998875 5689999999999999999999999999999999999999888764
No 251
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.73 E-value=4.7e-17 Score=173.55 Aligned_cols=137 Identities=14% Similarity=0.149 Sum_probs=122.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.+|++.+..+++.+|+|.+...... ......+.+|+.+++.++ ||+|+++++.+...++.|++|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMK-HPNIVQYQESFEENGNLYIVM 78 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCC-CCCeeeeEeeecCCCeEEEEE
Confidence 489999999999999999999999999999998754432 224457889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+|||++.++.+|
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~ 141 (256)
T cd08218 79 DYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIK 141 (256)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence 9999999999986 2578999999999999999999999999999999999999887653
No 252
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.73 E-value=3.4e-17 Score=174.74 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=117.9
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-ccCCe
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-ADSMH 844 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-~~~~~ 844 (908)
+.+.+|++.+.||+|+||.||++... +..+|+|.++... ....+.+|+.+++.++ |++++++++.+ .....
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~-----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~ 74 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGG 74 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc-----hHHHHHHHHHHHHhCC-CCCeeeEEEEEEcCCCc
Confidence 46789999999999999999999764 7789999875432 3456889999999995 99999999864 55678
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++++|.+|
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k 142 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAK 142 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEE
Confidence 999999999999999986 2478999999999999999999999999999999999999988764
No 253
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.73 E-value=1.4e-17 Score=181.52 Aligned_cols=139 Identities=16% Similarity=0.232 Sum_probs=121.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
.+++|++.+.||.|+||.||+|.+..+++.+++|.++..... ......+.+|+.++..++ ||||+++++.+... ..
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-h~ni~~~~~~~~~~~~~~ 80 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQ-HPNIVTVKEVVVGSNLDK 80 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcC-CCCEEEEEEEEEecCCCc
Confidence 357899999999999999999999999999999998754432 223445678999999996 99999999988777 89
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+.+ +|.+++. ..+++..++.++.|++.||.|||++||+|+||||+|||++.+|.+|
T Consensus 81 ~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~ 146 (293)
T cd07843 81 IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILK 146 (293)
T ss_pred EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEE
Confidence 9999999974 8988886 4589999999999999999999999999999999999999988764
No 254
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=7.1e-19 Score=191.69 Aligned_cols=136 Identities=13% Similarity=0.156 Sum_probs=123.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|+|+..||.|+||.||++.++.++-..|.|++... .....+.++-|+.||..+. ||+|++++..|...+.+||+
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~Cd-HP~ivkLl~ayy~enkLwil 107 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECD-HPVIVKLLSAYYFENKLWIL 107 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCC-ChHHHHHHHHHhccCceEEE
Confidence 4599999999999999999999988888888987543 3445678899999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|||.||-...++- ..+.+..++.+++|++.||.|||+++|||||||..|||++-+|.+|
T Consensus 108 iEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdir 170 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIR 170 (1187)
T ss_pred EeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEe
Confidence 99999999888775 7899999999999999999999999999999999999999999875
No 255
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.73 E-value=3.1e-17 Score=175.83 Aligned_cols=135 Identities=10% Similarity=0.089 Sum_probs=116.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++.+.||+|+||.||++.+..+ ..+|+|++++... ....+.+|+.+++.+. ||+|+++++.+.. ...|
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~~-~~~~ 76 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSE-EPIY 76 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc----CHHHHHHHHHHHHhCC-CCCcceEEEEECC-CCcE
Confidence 457799999999999999999988765 4599999875332 2346788999999995 9999999987754 5689
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~ 142 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCK 142 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEE
Confidence 9999999999999996 3478999999999999999999999999999999999999988764
No 256
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.73 E-value=3.5e-17 Score=177.43 Aligned_cols=135 Identities=16% Similarity=0.209 Sum_probs=119.9
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|++|.||++++..+++.+|+|.+..... ......+.+|+.+++.++ ||||+++++.+.+.+..|++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 77 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELK-HENIVRLHDVIHTENKLMLVF 77 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhc-CCCEeeeeeeEeeCCcEEEEE
Confidence 58999999999999999999999999999999875432 223456778999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++ +|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++++|.+|
T Consensus 78 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~ 140 (284)
T cd07836 78 EYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELK 140 (284)
T ss_pred ecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEE
Confidence 99975 8888875 3589999999999999999999999999999999999999988764
No 257
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.73 E-value=3.8e-17 Score=175.44 Aligned_cols=139 Identities=14% Similarity=0.145 Sum_probs=121.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~ 844 (908)
.+|++.+.||+|+||.||++.+..++..+++|.+...... .......+.+|+.+++.++ ||||+++++.+.+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 80 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ-HERIVQYYGCLRDRAEKT 80 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC-CCCeeeEEEEEEcCCCCE
Confidence 4789999999999999999999999999999988654321 1234557888999999995 9999999998765 467
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+++++|.+++. +.+++.....++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 81 ~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~ 146 (266)
T cd06651 81 LTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVK 146 (266)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEE
Confidence 899999999999999987 6789999999999999999999999999999999999999887654
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.73 E-value=5.1e-17 Score=174.23 Aligned_cols=137 Identities=18% Similarity=0.203 Sum_probs=123.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++....++..+++|++....... ....+.+|+.+++.++ |++++++++.+......|++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCN-HPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcC-CCCEEEEEEEEeeCCEEEEE
Confidence 47999999999999999999998899999999986544322 4567889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||++++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||++++++.+|
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~ 142 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVK 142 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEE
Confidence 99999999999986 2489999999999999999999999999999999999999887653
No 259
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.73 E-value=4.1e-17 Score=174.77 Aligned_cols=137 Identities=14% Similarity=0.220 Sum_probs=124.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|++.+.||+|+||.||++.+..+++.+++|.+...... ......+.+|+.+++.++ |++|+++++.+...+..++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLK-HPNLVKYYGVEVHREKVYIFM 78 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCC-CCChhheeeeEecCCEEEEEE
Confidence 488999999999999999999989999999998765432 346778999999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+|
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~k 139 (264)
T cd06626 79 EYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIK 139 (264)
T ss_pred ecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 9999999999997 4589999999999999999999999999999999999999988664
No 260
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.73 E-value=2.6e-17 Score=177.95 Aligned_cols=137 Identities=11% Similarity=0.151 Sum_probs=123.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|+..+.||.|+||.||++.+..++..+|+|++..... ......+.+|+.+++.+. ||+|+++++.+.+....|+|
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCC-CCCEeeEEEEEEECCEEEEE
Confidence 457888999999999999999999999999999875432 234567889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +++++..+..++.|++.||.|||+++++|+||+|+||+++.++.+|
T Consensus 81 ~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~ 141 (277)
T cd06640 81 MEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred EecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEE
Confidence 99999999999998 7899999999999999999999999999999999999999887653
No 261
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.73 E-value=5.7e-19 Score=207.93 Aligned_cols=176 Identities=15% Similarity=0.199 Sum_probs=141.0
Q ss_pred cCccccccccccCCcccCCCCCCCCC--ccccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhh
Q 002560 730 VGPLTKISHDDQNSKDYSSDIPKKPA--KSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKV 807 (908)
Q Consensus 730 lg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~ 807 (908)
+..+++...++++.+...-..-+... .....+++.++++ +|+....||.|.||.||.|.+..+|...|+|-+.....
T Consensus 1195 I~~le~~~~~~~r~~~~ig~v~d~~~~y~~kla~~lsnV~~-rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~ 1273 (1509)
T KOG4645|consen 1195 IRELEEKRKRNLRERGKIGQVCDTGNKYLNKLASSLSNVTF-RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDS 1273 (1509)
T ss_pred HHHHHHHHhhhhhhccceeeecccchHHHHHHHHHhcccee-eeccccccCCcceeeeEEeecCCccchhhhhhhhcCcc
Confidence 44455555555544433211111111 2234555666654 46667889999999999999999999999998876554
Q ss_pred hccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH
Q 002560 808 KCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLH 885 (908)
Q Consensus 808 ~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH 885 (908)
. ......+.+|..+|..++ |||++++|+.-.....+||.||||++|+|.+++. +..++...+.|..|++.|+.|||
T Consensus 1274 ~-~k~~~~i~eEm~vlE~ln-HpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH 1351 (1509)
T KOG4645|consen 1274 D-HKTFKLIAEEMKVLEGLN-HPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLH 1351 (1509)
T ss_pred c-cccCcchHHHHHHHHhcc-CccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 4 445667889999999996 9999999999999999999999999999999998 56788889999999999999999
Q ss_pred hCCcEecCCCCCcEEEcCCCccC
Q 002560 886 KRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 886 ~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||||||||+||+++.+|.+|
T Consensus 1352 ~~gIVHRDIK~aNI~Ld~~g~iK 1374 (1509)
T KOG4645|consen 1352 EHGIVHRDIKPANILLDFNGLIK 1374 (1509)
T ss_pred hcCceecCCCccceeeecCCcEE
Confidence 99999999999999999999876
No 262
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.73 E-value=3.1e-17 Score=177.76 Aligned_cols=138 Identities=8% Similarity=0.198 Sum_probs=120.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEEC----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLR----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-- 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-- 841 (908)
..+|++.+.||+|+||.||++... .+++.+|+|++...... .....+.+|+.+++.+. ||+|+++++++..
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~-~~~i~~~~~~~~~~~ 79 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLD-HENIVKYKGVCEKPG 79 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCC-CCChheEEeeeecCC
Confidence 457888999999999999999864 34789999998755432 34667899999999995 9999999988876
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+.|++|||+++++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~ 149 (284)
T cd05038 80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVK 149 (284)
T ss_pred CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEE
Confidence 668999999999999999997 3589999999999999999999999999999999999999887654
No 263
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=2.8e-17 Score=175.82 Aligned_cols=131 Identities=18% Similarity=0.269 Sum_probs=114.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC-------Cccceeeeeec-
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS-------ACVPQILCTCA- 840 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~-------~~i~~~~~~~~- 840 (908)
..|.+.++||=|.|++||+|++....++||||+.+... ...+..+.|+.+|++++.+ .+|+++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq----hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ----HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh----HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 67999999999999999999999999999999986544 2445678899999998432 36899999885
Q ss_pred ---cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCC
Q 002560 841 ---DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 841 ---~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~ 904 (908)
...++|||+|++ |.+|..+|. +.++...++.|+.||+.||.|||. .||||-||||+|||+...
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence 457999999998 889999987 779999999999999999999996 599999999999999754
No 264
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.73 E-value=3.5e-17 Score=182.01 Aligned_cols=140 Identities=14% Similarity=0.146 Sum_probs=118.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-------CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-------ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-------~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
...+|++.+.||+|+||.||+|++... ...+|+|.+.... .......+.+|+.+++++.+||||+++++.+
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 87 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA--TDKDLSDLVSEMEMMKMIGKHKNIINLLGAC 87 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeeeEEE
Confidence 345799999999999999999986432 2368999876432 2234567889999999996699999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHcC------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 840 ADSMHAGLLLNTYLACPLASILHT------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~~------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.....+|++|||+++++|.+++.. .++...+..++.|++.||.|||++||+||||||+|||+
T Consensus 88 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill 167 (334)
T cd05100 88 TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLV 167 (334)
T ss_pred ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEE
Confidence 999999999999999999999851 26678888999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
+.++.+|
T Consensus 168 ~~~~~~k 174 (334)
T cd05100 168 TEDNVMK 174 (334)
T ss_pred cCCCcEE
Confidence 9887654
No 265
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=1.4e-18 Score=184.21 Aligned_cols=137 Identities=12% Similarity=0.167 Sum_probs=124.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|..++.||+|+||.||++.+..+++.+|+|++...... ...+.+..|+.+|.+++ ++||.++|+.|..+..+|++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~--deIediqqei~~Ls~~~-~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE--DEIEDIQQEISVLSQCD-SPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc--hhhHHHHHHHHHHHhcC-cchHHhhhhheeecccHHHH
Confidence 4577779999999999999999999999999999876543 34677889999999985 89999999999999999999
Q ss_pred EecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||.||++.+.|+ +. +++..+..++++++.||.|||.++.+|||||+.|||+..+|.+|
T Consensus 90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vk 151 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVK 151 (467)
T ss_pred HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEE
Confidence 99999999999999 44 59999999999999999999999999999999999999998875
No 266
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.72 E-value=4.1e-17 Score=177.78 Aligned_cols=139 Identities=10% Similarity=0.150 Sum_probs=120.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
++..+|.+.+.||+|+||.||++.+.. ++..+++|.+..... .....+.+|+.+++.++ ||+|+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 77 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL---AARKDFQREAELLTNLQ-HEHIVKFYGVCG 77 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH---HHHHHHHHHHHHHhcCC-CCCcceEEEEEc
Confidence 467789999999999999999998643 445788888754332 23456889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
.....+++|||+++++|.+++. +.+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 78 DGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG 157 (291)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence 9999999999999999999985 1278899999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
.++.+|
T Consensus 158 ~~~~~~ 163 (291)
T cd05094 158 ANLLVK 163 (291)
T ss_pred cCCcEE
Confidence 988764
No 267
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.72 E-value=2.2e-17 Score=176.74 Aligned_cols=131 Identities=26% Similarity=0.399 Sum_probs=119.9
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||.|+||.||++.+..+++.+++|++.............+.+|..+++.++ |||++++++.+......|++|||+++++
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ-SPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC-CcchhHHHHheecCcEEEEEEecCCCCc
Confidence 689999999999999899999999987765544456678899999999996 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. +.+++..+..++.|++.||.|||++|++|+||+|+|||++.++.+|
T Consensus 80 L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~ 133 (265)
T cd05579 80 LASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLK 133 (265)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEE
Confidence 999997 6789999999999999999999999999999999999999988764
No 268
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.72 E-value=1.7e-17 Score=184.50 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=117.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA- 840 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~- 840 (908)
.-++|++.+.||+|+||.||+|.... +++.||+|++..... ......+..|+.++..+.+|+||+++++++.
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~ 82 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTK 82 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence 34579999999999999999997543 457899998864321 2234567889999999966999999998775
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----------------------------------------------------------
Q 002560 841 DSMHAGLLLNTYLACPLASILH---------------------------------------------------------- 862 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---------------------------------------------------------- 862 (908)
....+|++|||+++++|.+++.
T Consensus 83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (337)
T cd05054 83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG 162 (337)
T ss_pred CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence 4567899999999999999884
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 863 -----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 863 -----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vk 213 (337)
T cd05054 163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVK 213 (337)
T ss_pred hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEE
Confidence 1578889999999999999999999999999999999999888764
No 269
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.72 E-value=2.6e-18 Score=170.81 Aligned_cols=141 Identities=17% Similarity=0.280 Sum_probs=123.0
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
...+++++++..||.|++|.||+++.+.+|...|+|.+.+... .....+++..+.++....++|+|+++|++|..+..
T Consensus 88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N--kee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 88 QADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred ccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC--HHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 4578899999999999999999999999999999999987653 23456788888888887669999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.||.|. ..+..++. ++++|..+-.+...++.||.||.+ +||||||+||+|||+|+.|++|
T Consensus 166 V~IcMelMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniK 232 (391)
T KOG0983|consen 166 VFICMELMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIK 232 (391)
T ss_pred HHHHHHHHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEE
Confidence 999999883 34444444 889999999999999999999986 5899999999999999999987
No 270
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.72 E-value=5.5e-17 Score=172.88 Aligned_cols=134 Identities=14% Similarity=0.201 Sum_probs=120.8
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|+||.||++.+..+++.+|+|.+...... ......+.+|+.+++.++ ||+++++++.+...+..++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLS-HPNIIEYYENFLEDKALMIVM 78 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCC-CCchhheeeeEecCCEEEEEE
Confidence 589999999999999999999999999999998765432 234567889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~ 138 (256)
T cd08220 79 EYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK 138 (256)
T ss_pred ecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 9999999999997 3489999999999999999999999999999999999998654
No 271
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.72 E-value=3.5e-17 Score=176.87 Aligned_cols=136 Identities=12% Similarity=0.160 Sum_probs=122.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
-|++.+.||.|+||.||++.+..++..+|+|++..... ......+.+|+.++..++ ||+|+++++.+.++.+.|+||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHHHhcC-CCCEeEEEEEEEeCCeEEEEE
Confidence 47788999999999999999988999999998764432 224467889999999985 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.|+.|||++|++|+||||+||+++.+|.+|
T Consensus 82 e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~ 141 (277)
T cd06641 82 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 141 (277)
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEE
Confidence 9999999999998 7789999999999999999999999999999999999999888653
No 272
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.72 E-value=5.1e-17 Score=173.93 Aligned_cols=137 Identities=20% Similarity=0.286 Sum_probs=124.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|++|.||++.+..+++.+++|++...... .....+.+|+.++..++ ||+++++++.+......|++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCE-SPYVVKCYGAFYKEGEISIV 77 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEccCCeEEEE
Confidence 4799999999999999999999999999999998765321 34567889999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++.....++.|++.||.|||+ +|++||||+|+||+++.+|.+|
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~ 140 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVK 140 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEE
Confidence 99999999999997 779999999999999999999999 9999999999999999888653
No 273
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.72 E-value=3.4e-17 Score=176.92 Aligned_cols=137 Identities=11% Similarity=0.157 Sum_probs=122.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~~~i 847 (908)
.|++.+.||.|+||.||++.+..+++.+|+|.+.... .......+.+|+.+++.+. .||+++++++.+.+....|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5788899999999999999999999999999886532 1223456788999999985 49999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. +.+++..+..++.|++.||.|||++||+|+||+|+||+++.+|.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~ 141 (277)
T cd06917 80 IMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVK 141 (277)
T ss_pred EEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEE
Confidence 999999999999998 7889999999999999999999999999999999999999888664
No 274
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.72 E-value=3.3e-17 Score=176.26 Aligned_cols=130 Identities=15% Similarity=0.100 Sum_probs=109.3
Q ss_pred EecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.... ....+++|.+.... .......+.+|+.+++.++ ||||+++++.+......|++|||++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~-h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELN-HPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCC-CCCcceEEEEECCCCceEEEEEeCC
Confidence 58999999999996543 34578888765432 1223456788999999985 9999999999999999999999999
Q ss_pred CCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~k 140 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVK 140 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEE
Confidence 999999986 1246778899999999999999999999999999999999988764
No 275
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.72 E-value=4.3e-17 Score=173.86 Aligned_cols=138 Identities=20% Similarity=0.207 Sum_probs=122.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.|+..+.||+|+||.||++.+..+++.+++|.+...... .......+.+|+.+++.++ |++++++++.+.+....|+
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~~~~~~l 79 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ-HPNIVQYLGTEREEDNLYI 79 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC-CCCchheeeeEecCCeEEE
Confidence 367788999999999999999989999999998654321 1234567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+|
T Consensus 80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~k 142 (258)
T cd06632 80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVK 142 (258)
T ss_pred EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 999999999999997 5689999999999999999999999999999999999999888764
No 276
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.72 E-value=2.8e-17 Score=176.99 Aligned_cols=136 Identities=13% Similarity=0.174 Sum_probs=119.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc------C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------S 842 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~------~ 842 (908)
+.|++.+.||+|+||.||++.+..+++.+|+|++.... .....+.+|+.++..+.+|||++++++.+.. .
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 45888899999999999999999999999999986532 2345678899999998679999999998764 3
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+.+++|.+++. ..+++..+..++.|++.||.|||+++|+||||||+||++++++.+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~ 151 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 151 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEE
Confidence 56899999999999999987 3589999999999999999999999999999999999999988654
No 277
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.72 E-value=4.4e-17 Score=174.27 Aligned_cols=136 Identities=13% Similarity=0.149 Sum_probs=118.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+.-++|++++.||+|+||.||+|..+ +++.+|+|.+..... ....+.+|+.+++.+. ||+++++++.+. ....
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~ 75 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQ-HPRLVRLYAVVT-QEPI 75 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcC-CcCeeeEEEEEc-cCCc
Confidence 34578999999999999999999865 567899998865432 2357889999999995 999999998874 4578
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++...+..++.|++.||.|||++|++||||||+||++++++.++
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~ 142 (260)
T cd05067 76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCK 142 (260)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEE
Confidence 99999999999999986 4689999999999999999999999999999999999999988653
No 278
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.72 E-value=7.4e-17 Score=175.71 Aligned_cols=137 Identities=14% Similarity=0.190 Sum_probs=120.0
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.++|++.+.||+|+||.||++....+++.+|+|++.... .....+.+|..++..+.+|||++++++.+...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 577999999999999999999999999999999986532 12346778999999986699999999887543
Q ss_pred CeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+++++|.++++ ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEE
Confidence 46899999999999998874 4689999999999999999999999999999999999999888654
No 279
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.72 E-value=4e-17 Score=176.70 Aligned_cols=139 Identities=14% Similarity=0.125 Sum_probs=116.3
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+..++|++.+.||+|+||.||++.+..+++ .+++|.+.... .......+..|..++..+. ||||+++++++.
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~~~l~~l~-h~~iv~~~~~~~- 79 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRS--GRQTFQEITDHMLAMGSLD-HAYIVRLLGICP- 79 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccccc--chHHHHHHHHHHHHHhcCC-CCCcceEEEEEC-
Confidence 456889999999999999999999887776 46667654221 1223356777888888885 999999999875
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....++++||+++++|.+++. +.+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 80 ~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~k 149 (279)
T cd05111 80 GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQ 149 (279)
T ss_pred CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEE
Confidence 456789999999999999996 5689999999999999999999999999999999999999888764
No 280
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.72 E-value=5.4e-17 Score=175.44 Aligned_cols=139 Identities=12% Similarity=0.157 Sum_probs=117.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.-++|++.+.||+|+||.||++.+.. ++..+|+|.+..... ......+.+|+.+++.++ ||||+++++.+..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~-~~~iv~~~~~~~~ 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS--MRERIEFLNEASVMKEFN-CHHVVRLLGVVSQ 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCeeeEEEEEcC
Confidence 34679999999999999999998642 356899998754321 123456889999999985 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc--C----------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH--T----------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~--~----------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....|++|||+++++|.+++. . .++...+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence 999999999999999999986 1 246678889999999999999999999999999999999888764
No 281
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.72 E-value=4.6e-17 Score=175.29 Aligned_cols=131 Identities=11% Similarity=0.132 Sum_probs=113.5
Q ss_pred EecCCCeEEEEEEEECCCCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+..++. .+++|.++... .......+.+|+.++.++.+||||+++++.+......|++|||++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 79 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP 79 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence 58999999999999988776 46888775322 223445788999999999779999999999999999999999999
Q ss_pred CCcHHHHHc-C-----------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH-T-----------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~-~-----------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. . .+++..+..++.|++.||+|||++|++||||||+|||++.++.+|
T Consensus 80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEE
Confidence 999999986 1 368899999999999999999999999999999999999888764
No 282
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.72 E-value=5e-17 Score=178.68 Aligned_cols=139 Identities=19% Similarity=0.224 Sum_probs=120.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--Ce
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MH 844 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~ 844 (908)
++++|++.+.||+|+||.||++.+..+++.||+|.+...... ......+.+|+.+++.++ |++++++++.+... +.
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~ 82 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER-DGIPISSLREITLLLNLR-HPNIVELKEVVVGKHLDS 82 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC-CCCcchhhHHHHHHHhCC-CCCCcceEEEEecCCCCe
Confidence 578999999999999999999999999999999998654322 222335668999999995 99999999988654 56
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|+||||+. ++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~k 148 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLK 148 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 899999996 47888776 5689999999999999999999999999999999999999988764
No 283
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.72 E-value=4.6e-17 Score=173.54 Aligned_cols=134 Identities=10% Similarity=0.132 Sum_probs=117.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+++++|++.+.||+|+||.||++.. +++.+|+|.++... ....+.+|+.+++.++ ||+++++++.+... ..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~-~~ 73 (254)
T cd05083 3 LNLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLH-HKNLVRLLGVILHN-GL 73 (254)
T ss_pred ccHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCC-CCCcCeEEEEEcCC-Cc
Confidence 3578899999999999999999864 67889999875432 2357889999999995 99999999988654 57
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~k 140 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAK 140 (254)
T ss_pred EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEE
Confidence 99999999999999997 3478999999999999999999999999999999999999888664
No 284
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=4.5e-17 Score=178.91 Aligned_cols=133 Identities=18% Similarity=0.142 Sum_probs=104.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-CCceEEEeeechhhh--hccchHHHHHHHHHHHHhcCCCCccc-eeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-SENFLSLKRFSKQKV--KCLGKEVQVLKEKNLMKSVSPSACVP-QILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-~~~~~alK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~~i~-~~~~~~~~ 841 (908)
.-..+|.+.+.||+|+||.||+|+++. +++.+|+|++..... ........+.+|+.+|+.++ |++++ .++..
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~-h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR-GIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc-CCCCCcEEEEc---
Confidence 346789999999999999999999876 677789998653211 12224566899999999996 77766 45442
Q ss_pred CCeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCC-CCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGV-SPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDI-Kp~NILi~~~g~vK 908 (908)
...|+||||++|++|.. +. ... ...++.|++.||.|||++||+|||| ||+|||++.+|.+|
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~-~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ik 152 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-AR-PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAA 152 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hC-ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEE
Confidence 45799999999999973 22 111 1467899999999999999999999 99999999888664
No 285
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.72 E-value=3.6e-17 Score=176.41 Aligned_cols=137 Identities=14% Similarity=0.234 Sum_probs=123.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++.+..+++.+|+|.+.... .......+.+|+.+++.+. |||++++++.+.+...+|++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCR-SPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcC-CCCeeeeeEEEEECCeEEEE
Confidence 46888999999999999999999999999999986543 1234456788999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+||+++++|.+++. ..+++..+..++.|++.||.|||+++++||||+|+||+++++|.++
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~ 138 (274)
T cd06609 78 MEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVK 138 (274)
T ss_pred EEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEE
Confidence 99999999999998 6899999999999999999999999999999999999999988653
No 286
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.72 E-value=5.4e-17 Score=178.87 Aligned_cols=137 Identities=15% Similarity=0.201 Sum_probs=118.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~ 845 (908)
.|++.+.||+|+||.||++.+.. +++.||+|.+.............+.+|+.++..++ ||+|+++++.+.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 79 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK-HENVVSLVEVFLEHADKSV 79 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC-CCCccceEEEEeCCCCceE
Confidence 48899999999999999999988 88999999987644333334567788999999995 99999999999888 889
Q ss_pred EEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC----CCccC
Q 002560 846 GLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK----SGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~----~g~vK 908 (908)
|+||||+++ +|.+++. ..+++..++.++.|++.||.|||++||+||||||+|||++. +|.+|
T Consensus 80 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 80 YLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred EEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEE
Confidence 999999965 6776664 26899999999999999999999999999999999999998 66654
No 287
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.72 E-value=5.7e-17 Score=172.78 Aligned_cols=135 Identities=13% Similarity=0.186 Sum_probs=123.7
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.++|++.+.||.|+||.||++.+..+++.+++|.+..... ...+.+|+.+++.+ +||+|+++++.+.+..+.|+
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l 75 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWI 75 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEE
Confidence 4679999999999999999999998899999999865432 56788999999999 59999999999999999999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||+.||+||||+|+||+++.+|.+|
T Consensus 76 ~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~ 139 (256)
T cd06612 76 VMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAK 139 (256)
T ss_pred EEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEE
Confidence 999999999999986 5689999999999999999999999999999999999999988764
No 288
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.72 E-value=5.4e-17 Score=176.46 Aligned_cols=139 Identities=20% Similarity=0.313 Sum_probs=122.3
Q ss_pred ceEEEEEecCCCeEEEEEEEEC---CCCceEEEeeechhhhhc-cchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLR---DSENFLSLKRFSKQKVKC-LGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~---~~~~~~alK~~~~~~~~~-~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+|++.+.||+|+||.||+++.. .+++.+|+|++.+..... ......+.+|+.++..+.+||+|+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 5889999999999999999864 456899999987654322 334567889999999997799999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||+.+++|.+++. ..+++..++.++.|++.||.|||++|++||||||.||+++.++.+|
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~ 145 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVV 145 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEE
Confidence 99999999999999987 6689999999999999999999999999999999999999887653
No 289
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.72 E-value=1.8e-17 Score=179.75 Aligned_cols=140 Identities=9% Similarity=0.102 Sum_probs=120.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+.+.+|++.+.||.|+||.||++.+..+ +..+|+|+++... .......+..|..++..+. ||+|+++++.+.
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~ 78 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQ-HPNIVCLLGVVT 78 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCC-CCCcCeEEEEEc
Confidence 4677899999999999999999987543 5789999987432 1223456888999999985 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
.....++++||+.+++|.+++. ..++...+..++.|++.||.|||++||+||||||+|||++
T Consensus 79 ~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 9999999999999999999984 2378888999999999999999999999999999999999
Q ss_pred CCCccC
Q 002560 903 KSGHLQ 908 (908)
Q Consensus 903 ~~g~vK 908 (908)
+++.+|
T Consensus 159 ~~~~~k 164 (283)
T cd05091 159 DKLNVK 164 (283)
T ss_pred CCCceE
Confidence 887664
No 290
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.72 E-value=6.9e-17 Score=172.25 Aligned_cols=136 Identities=12% Similarity=0.150 Sum_probs=120.0
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
...+|++.+.||.|+||.||++.+. .+..+|+|.+..... ....+.+|+.+++.+. ||+++++++.+......|
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLS-HPKLVQLYGVCTERSPIC 75 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCC-CCCeeeEEEEEccCCceE
Confidence 4568999999999999999999875 467899998765432 2346788999999995 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. +.+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~ 140 (256)
T cd05112 76 LVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVK 140 (256)
T ss_pred EEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEE
Confidence 9999999999999986 4589999999999999999999999999999999999999887653
No 291
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.72 E-value=6.3e-17 Score=174.89 Aligned_cols=137 Identities=18% Similarity=0.214 Sum_probs=119.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+..++|++.+.||+|+||.||++.+.. ++..+++|.+.... .......+.+|..+++.++ |++|+++++.+.
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~ 79 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFN-HQNIVRLIGVSF 79 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCC-CCCEeeEEEEEc
Confidence 345789999999999999999999977 67899999875432 1223456888999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C-------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T-------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~-------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
+....|++|||+++++|.+++. + .+++..+..++.||+.||.|||+++++||||||+|||++.+|
T Consensus 80 ~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~ 153 (277)
T cd05036 80 ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG 153 (277)
T ss_pred cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC
Confidence 9999999999999999999986 1 488999999999999999999999999999999999998765
No 292
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.72 E-value=2.3e-17 Score=179.75 Aligned_cols=136 Identities=15% Similarity=0.227 Sum_probs=120.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|.....||.|+||.||++.+..++..+|+|.+.... ......+.+|+.+++.++ |||++++++.+...++.|++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~ii~~~~~~~~~~~~~lv 97 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYH-HENVVDMYNSYLVGDELWVV 97 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCC-CCcHHHHHHheecCCeEEEE
Confidence 34555678999999999999999999999999876433 223456889999999985 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. +.+++..+..++.||+.||.|||++||+||||||+||++++++.+|
T Consensus 98 ~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~k 158 (292)
T cd06658 98 MEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIK 158 (292)
T ss_pred EeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEE
Confidence 99999999999987 7799999999999999999999999999999999999999888764
No 293
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.72 E-value=4.6e-17 Score=176.60 Aligned_cols=136 Identities=13% Similarity=0.159 Sum_probs=120.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++++.||.|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||||+++++++.+....|++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELN-HPNIVKLLDVIHTENKLYLVF 78 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcC-CCCCcchhhhcccCCcEEEEe
Confidence 58999999999999999999999999999998865432 2223457889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+. ++|..++. ..+++..+..++.|++.||.|||++|++||||+|+||+++.+|.+|
T Consensus 79 e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~ 140 (284)
T cd07860 79 EFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIK 140 (284)
T ss_pred eccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9995 68888885 4689999999999999999999999999999999999999988764
No 294
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.71 E-value=5e-17 Score=174.74 Aligned_cols=132 Identities=14% Similarity=0.225 Sum_probs=112.3
Q ss_pred ccceEEEEEe--cCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 768 LTDMEWRKCL--YSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 768 ~~~~~~~~~L--G~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
.++|++.+.+ |+|+||.||++.++.++..+|+|.+.+..... .|......+.+||+++++++.+...+..
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3567776666 99999999999999999999999987643211 1222233233699999999999999999
Q ss_pred EEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC-cc
Q 002560 846 GLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG-HL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g-~v 907 (908)
|+||||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++ .+
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~ 149 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRI 149 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeE
Confidence 99999999999999997 5799999999999999999999999999999999999999887 54
No 295
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.71 E-value=4.8e-17 Score=174.02 Aligned_cols=136 Identities=13% Similarity=0.126 Sum_probs=117.8
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++... .+..+|+|.+..... ....+.+|+.+++.++ |+++++++..+. ....
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~-~~~i~~~~~~~~-~~~~ 75 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLR-HDKLVQLYAVVS-EEPI 75 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcC-CCceEEEEeEEC-CCCc
Confidence 34678999999999999999999875 556799998875432 2346889999999995 999999998875 4568
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~ 142 (260)
T cd05070 76 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCK 142 (260)
T ss_pred EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEE
Confidence 99999999999999986 3589999999999999999999999999999999999999887654
No 296
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.71 E-value=6.3e-17 Score=180.60 Aligned_cols=138 Identities=16% Similarity=0.202 Sum_probs=120.0
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
.++|++.+.||+|+||.||++.+..++..||+|.+.+.. ........+.+|+.+++.++ ||||+++++.+....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMK-HENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcC-CCCccceeeeecCCccccc
Confidence 356999999999999999999999999999999886532 22223456789999999995 999999999887653
Q ss_pred --eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|+|+ +++|..++. ..+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 458999998 789998887 7899999999999999999999999999999999999999888764
No 297
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.71 E-value=6.9e-17 Score=181.11 Aligned_cols=138 Identities=15% Similarity=0.219 Sum_probs=119.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.+.|++.+.||+|+||.||++.+..+++.+|+|.+.+.. ........+.+|+.+++.++ ||||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVN-HKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcC-CCCCcceeeeeccCCCccc
Confidence 477999999999999999999999999999999986532 22234456778999999995 99999999887543
Q ss_pred -CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+.|+||||+. ++|.+.+...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~k 158 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 158 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEE
Confidence 35799999995 588888875699999999999999999999999999999999999999988764
No 298
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.71 E-value=5.3e-17 Score=174.80 Aligned_cols=136 Identities=17% Similarity=0.150 Sum_probs=115.1
Q ss_pred eEEEEEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
|++.+.||+|+||.||++.... ++..+|+|.+..... .......+.+|+.+++.+. ||+|+++++.+....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~ 78 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH-TYSEIEEFLSEAACMKDFD-HPNVMKLIGVCFEASSLQK 78 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC-CHHHHHHHHHHHHHHHhCC-CCCeeeEEeeeccCCcccc
Confidence 5778999999999999998764 347899998865332 2234567899999999985 999999998775544
Q ss_pred --eEEEEEecCCCCcHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH--------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~--------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+||++++++.+|
T Consensus 79 ~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~k 153 (273)
T cd05035 79 IPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVC 153 (273)
T ss_pred CcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEE
Confidence 3799999999999998884 2589999999999999999999999999999999999999988764
No 299
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.71 E-value=6.2e-17 Score=176.51 Aligned_cols=137 Identities=15% Similarity=0.161 Sum_probs=123.3
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
..+|++.+.||+|+||.||++.+..+++.+++|.+.... ....+.+.+|+.+++.+. |||++++++.+......|+
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~l 93 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ---QPKKELIINEILVMRENK-HPNIVNYLDSYLVGDELWV 93 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc---chHHHHHHHHHHHHhhcC-CCCeeehhheeeeCCcEEE
Confidence 478999999999999999999998899999999875432 223467889999999985 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 94 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~k 155 (293)
T cd06647 94 VMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVK 155 (293)
T ss_pred EEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEE
Confidence 999999999999998 6789999999999999999999999999999999999999887653
No 300
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.71 E-value=5e-17 Score=176.04 Aligned_cols=139 Identities=9% Similarity=0.109 Sum_probs=120.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEEC-----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLR-----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~-----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
+...+|.+.+.||+|+||.||++... .++..+|+|.+.... ......+.+|+.+++.+. |+||+++++.+.
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~ 77 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQ-HQHIVRFYGVCT 77 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCC-CCCCceEEEEEe
Confidence 45678999999999999999999753 345688999876432 233557889999999995 999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc--C---------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 841 DSMHAGLLLNTYLACPLASILH--T---------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~--~---------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
+....|++|||+++++|.+++. + .+++..+..++.|++.||.|||++||+||||||+|||+++
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~ 157 (280)
T cd05092 78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQ 157 (280)
T ss_pred cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcC
Confidence 9999999999999999999986 1 3788999999999999999999999999999999999998
Q ss_pred CCccC
Q 002560 904 SGHLQ 908 (908)
Q Consensus 904 ~g~vK 908 (908)
++.+|
T Consensus 158 ~~~~k 162 (280)
T cd05092 158 GLVVK 162 (280)
T ss_pred CCCEE
Confidence 88664
No 301
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.71 E-value=1.9e-17 Score=176.99 Aligned_cols=128 Identities=14% Similarity=0.093 Sum_probs=110.2
Q ss_pred EEecCCCeEEEEEEEECCCCc-------eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 775 KCLYSTDCSEIGLVLLRDSEN-------FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~-------~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+.||.|+||.||++.+...+. .+++|.+.... ....+.+..|..+++.+. |||++++++.+......++
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~~~-h~~iv~~~~~~~~~~~~~l 76 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH---RNYSESFFEAASMMSQLS-HKHLVLNYGVCVCGDESIM 76 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh---HHHHHHHHHHHHHHHhCC-CCChhheeeEEEeCCCcEE
Confidence 368999999999998865543 47888765432 223456788999999985 9999999999999899999
Q ss_pred EEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 848 LLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 848 v~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
||||+++++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~ 138 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREED 138 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccc
Confidence 999999999999997 35899999999999999999999999999999999999988764
No 302
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.71 E-value=4.2e-17 Score=176.05 Aligned_cols=126 Identities=17% Similarity=0.138 Sum_probs=107.7
Q ss_pred EecCCCeEEEEEEEECCC------------------------CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCc
Q 002560 776 CLYSTDCSEIGLVLLRDS------------------------ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~------------------------~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~ 831 (908)
.||+|+||.||++....+ ...+++|++..... .....+..|..+++.++ |||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~-h~n 77 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVS-HIH 77 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCC-CCC
Confidence 599999999999875321 23588888765431 23456788899999985 999
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
|+++++++.+....|+||||+++++|..++. +.+++..+..++.|++.||.|||++||+||||||+|||++..|
T Consensus 78 iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 78 LAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred eeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccC
Confidence 9999999999999999999999999999985 5689999999999999999999999999999999999998654
No 303
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.71 E-value=7.7e-17 Score=173.58 Aligned_cols=137 Identities=12% Similarity=0.175 Sum_probs=121.5
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
.++|++.+.||.|+||.||++.++.+++.+++|++..... ....+.+|+.+++.+..|++|+++++.+.+..
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 4789999999999999999999998999999999875432 34568899999999866999999999986544
Q ss_pred --eEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+++++|.+++. ..+++..++.++.|++.||.|||++|++|+||+|+||+++.+|.+|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~ 153 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVK 153 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEE
Confidence 5899999999999999875 3689999999999999999999999999999999999999988764
No 304
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.71 E-value=5.2e-17 Score=180.80 Aligned_cols=136 Identities=13% Similarity=0.155 Sum_probs=118.3
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----M 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~ 843 (908)
++|++.+.||+|+||.||++.+..+++.||+|.++... .......+.+|+.+++.++ ||||+++++++... .
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE--HQTFCQRTLREIKILRRFK-HENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc--cchhHHHHHHHHHHHHhCC-CCCcCchhheeecccccccc
Confidence 57999999999999999999999999999999986422 2234456788999999996 99999999876543 4
Q ss_pred eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|++|||+. ++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~k 146 (336)
T cd07849 82 DVYIVQELME-TDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLK 146 (336)
T ss_pred eEEEEehhcc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEE
Confidence 6899999996 58888887 7899999999999999999999999999999999999999988764
No 305
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.71 E-value=5.3e-17 Score=176.57 Aligned_cols=139 Identities=14% Similarity=0.180 Sum_probs=120.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||++.+.. ++..+|+|++..... ......+.+|+.+++.+. ||+|+++++.+.+
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~ei~~l~~l~-h~~iv~~~~~~~~ 79 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS--ADMQADFQREAALMAEFD-HPNIVKLLGVCAV 79 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC--HHHHHHHHHHHHHHHhcC-CCchheEEEEEcC
Confidence 46789999999999999999998753 577999998865431 223456888999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc-C-----------------------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCC
Q 002560 842 SMHAGLLLNTYLACPLASILH-T-----------------------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPD 897 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-~-----------------------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~ 897 (908)
....|++|||+++++|.+++. . .+++..+..++.|++.||.|||++|++||||||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ 159 (288)
T cd05050 80 GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATR 159 (288)
T ss_pred CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHh
Confidence 999999999999999999986 1 3677888999999999999999999999999999
Q ss_pred cEEEcCCCccC
Q 002560 898 VLMLDKSGHLQ 908 (908)
Q Consensus 898 NILi~~~g~vK 908 (908)
|||++.+|.+|
T Consensus 160 nil~~~~~~~~ 170 (288)
T cd05050 160 NCLVGENMVVK 170 (288)
T ss_pred heEecCCCceE
Confidence 99999888664
No 306
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.71 E-value=6.4e-17 Score=175.70 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=122.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ |++|+++++.+.+.+..|++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLR-HENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcC-CCCeeehhheEEECCEEEEE
Confidence 469999999999999999999999999999998865432 2334567889999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||++++.+..++. ..+++..+..++.|++.||.|||++|++||||+|+||+++++|.+|
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~k 140 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLK 140 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence 99999877776665 5689999999999999999999999999999999999999988764
No 307
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.71 E-value=3.5e-17 Score=175.48 Aligned_cols=137 Identities=18% Similarity=0.276 Sum_probs=123.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
++|++.+.||.|+||.||++.++.+++.+++|.+..... ......+.+|+.+++.+. ||||+++++.+......|++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCN-SPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCC-CCchhhhheeeecCCEEEEE
Confidence 468888999999999999999999999999999876532 234567889999999996 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|.+++. ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.+|.+|
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~ 141 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIK 141 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEE
Confidence 99999999999997 578999999999999999999999 9999999999999999988654
No 308
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.71 E-value=7.7e-17 Score=177.04 Aligned_cols=138 Identities=14% Similarity=0.157 Sum_probs=121.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|++.+.||+|+||.||++.+..+++.+|+|.+.............+.+|+.+++.++ |||++++++.+.+.+..|+|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR-HPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC-CCCEEEEEEEEEeCCeEEEE
Confidence 45889999999999999999999999999999986544333444567889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+. ++|.+++. +.+++..+..++.|++.||.|||++||+||||+|+||+++.+|.+|
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~k 155 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVK 155 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEE
Confidence 99997 56666664 6789999999999999999999999999999999999999988764
No 309
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.71 E-value=7.6e-17 Score=174.70 Aligned_cols=138 Identities=12% Similarity=0.161 Sum_probs=120.6
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec------
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA------ 840 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~------ 840 (908)
....|++.+.||.|+||.||++.+..+++.+|+|++.... .....+..|+.++..+.+|+|++++++.+.
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 3468999999999999999999999999999999876542 233567789999999867999999999874
Q ss_pred cCCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.....|++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 3568899999999999999986 4588999999999999999999999999999999999999888653
No 310
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.71 E-value=1.2e-16 Score=170.99 Aligned_cols=136 Identities=11% Similarity=0.108 Sum_probs=118.2
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
+..++|++.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+.+++.+. |++++++++.+.. ...
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~-~~~ 75 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQ-HDKLVKLHAVVTK-EPI 75 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh----hHHHHHHHHHHHHHhcC-CCCcceEEEEEcC-CCe
Confidence 45688999999999999999999865 45679999876432 23457888999999995 9999999999887 788
Q ss_pred EEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++|||+++++|.+++. ..++...+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~ 142 (260)
T cd05073 76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK 142 (260)
T ss_pred EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEE
Confidence 99999999999999996 3478888999999999999999999999999999999999888764
No 311
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.71 E-value=1.2e-16 Score=169.78 Aligned_cols=137 Identities=18% Similarity=0.259 Sum_probs=124.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|++|.||++.+..+++.+++|.+...... ......+.+|+.++..+. ||+++++++.+.+....|++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLK-HPNIVKYIGSIETSDSLYIIL 78 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCC-CCCccEEEEEEEeCCEEEEEE
Confidence 588999999999999999999989999999998765432 234567899999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 79 e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~ 139 (254)
T cd06627 79 EYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVK 139 (254)
T ss_pred ecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEE
Confidence 9999999999987 6799999999999999999999999999999999999999887654
No 312
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.71 E-value=1.3e-16 Score=173.98 Aligned_cols=135 Identities=13% Similarity=0.139 Sum_probs=117.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
+++|++.+.||+|++|.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||+++++++++.+..+.|+
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 78 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQ-HGNIVRLQDVVHSEKRLYL 78 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhcc-CCCEeeEEEEEecCCeEEE
Confidence 4689999999999999999999999999999998865432 2234456788999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 848 LLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 848 v~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||||++ ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+||+++.++
T Consensus 79 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~ 139 (294)
T PLN00009 79 VFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT 139 (294)
T ss_pred EEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC
Confidence 999996 57877775 2368888999999999999999999999999999999998643
No 313
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.71 E-value=1.1e-16 Score=171.29 Aligned_cols=135 Identities=10% Similarity=0.067 Sum_probs=115.9
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++...||+|+||.||++.+..+ ..+|+|.+..... ..+.+.+|+.+++.+. ||+++++++.+. .+..|
T Consensus 4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~-h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 4 PRESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM----MPEAFLQEAQIMKKLR-HDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred ChHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc----cHHHHHHHHHHHHhCC-CCCeeeEEEEEc-CCCcE
Confidence 456799999999999999999988655 4689998764331 2356788999999995 999999998875 45689
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+.+++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||+++++.+|
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~ 142 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCK 142 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEE
Confidence 9999999999999996 3478999999999999999999999999999999999999988654
No 314
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.71 E-value=2.4e-17 Score=178.20 Aligned_cols=136 Identities=10% Similarity=0.154 Sum_probs=121.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
-|+..+.||+|+||.||++.+..++..+|+|.+..... ......+.+|+.+++.+. ||+|+++++.+...+..|+||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCD-SPYITRYYGSYLKGTKLWIIM 81 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCC-CCccHhhhcccccCCceEEEE
Confidence 36667789999999999999998999999998864432 223467889999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. +.+++..++.++.|++.||.|||++|++|+||+|+||+++++|.+|
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~ 141 (277)
T cd06642 82 EYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVK 141 (277)
T ss_pred EccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEE
Confidence 9999999999988 7799999999999999999999999999999999999999888654
No 315
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.71 E-value=9.2e-17 Score=171.51 Aligned_cols=130 Identities=13% Similarity=0.201 Sum_probs=113.5
Q ss_pred EEecCCCeEEEEEEEECCCC---ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLLRDSE---NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~---~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++.+..++ ..+|+|.+...... .....+.+|+.+++.+. ||+++++++++. ....+++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~-~~~~~~v~e~ 76 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLD-HPCIVRLIGVCK-GEPLMLVMEL 76 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcC-CCCeeeEEEEEc-CCceEEEEEe
Confidence 46999999999999876554 78999998765533 34567889999999995 999999999876 4568999999
Q ss_pred CCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~k 135 (257)
T cd05060 77 APLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAK 135 (257)
T ss_pred CCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEE
Confidence 99999999997 5699999999999999999999999999999999999999988764
No 316
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.71 E-value=9.8e-17 Score=171.67 Aligned_cols=137 Identities=15% Similarity=0.197 Sum_probs=120.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--cCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--DSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~~~~~~i 847 (908)
+|++.+.||.|+||.||++.+..++..+|+|.+..... .......+..|+.+++.++ ||+++++++.+. .....|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELK-HPNIVRYYDRIIDRSNQTLYI 78 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcC-CCccceeeeeeecCCCCEEEE
Confidence 58999999999999999999999999999999865443 2334567888999999995 999999998764 4467899
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH-----hCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLH-----KRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH-----~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.||| +.+|+|+||||+||+++.+|.+|
T Consensus 79 ~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~k 150 (265)
T cd08217 79 VMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVK 150 (265)
T ss_pred EehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEE
Confidence 999999999999985 46899999999999999999999 99999999999999999988764
No 317
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.71 E-value=7.4e-17 Score=173.72 Aligned_cols=135 Identities=16% Similarity=0.129 Sum_probs=112.8
Q ss_pred EEEEEecCCCeEEEEEEEECCCCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc------CC
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD------SM 843 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~------~~ 843 (908)
.+.+.||+|+||.||++++..++. .+|+|.++... ......+.+.+|..+++.++ ||||+++++.+.. ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI-CTRSEMEDFLSEAVCMKEFD-HPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc-CCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEccCCcccCCC
Confidence 467889999999999999877765 68999876542 22334567889999999995 9999999986532 23
Q ss_pred eEEEEEecCCCCcHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++|||+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 152 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVC 152 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEE
Confidence 5789999999999998873 3478999999999999999999999999999999999999887654
No 318
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.71 E-value=1.2e-16 Score=171.82 Aligned_cols=135 Identities=16% Similarity=0.201 Sum_probs=116.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+++.....||+|+||.||++.+..++..+++|.+.... ......+.+|+.+++.++ |+||+++++.+......|++
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLK-HRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcC-CCCeeeeeeeeccCCEEEEE
Confidence 33444568999999999999999899999999876543 224557889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCC--CHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCcc
Q 002560 849 LNTYLACPLASILH---TPL--DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHL 907 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l--~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~v 907 (908)
|||+++++|.+++. ..+ ++..+..++.|++.||.|||++||+||||||+|||++. ++.+
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~ 148 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVV 148 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeE
Confidence 99999999999987 345 88889999999999999999999999999999999986 4443
No 319
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.71 E-value=1.4e-16 Score=173.24 Aligned_cols=137 Identities=20% Similarity=0.267 Sum_probs=119.7
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCeEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMHAG 846 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~~~ 846 (908)
++|+..+.||.|++|.||+|.+..+++.+|+|.+..... ......+.+|+.+++.++ ||||+++++.+.+ ...+|
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCK-SPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCC-CCCeeeeeeEEEccCCCeEE
Confidence 468999999999999999999999999999999875432 234567889999999995 9999999998754 45789
Q ss_pred EEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+|
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~ 145 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVK 145 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEE
Confidence 9999999999988764 4588999999999999999999999999999999999999887653
No 320
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.71 E-value=7.7e-17 Score=171.34 Aligned_cols=130 Identities=11% Similarity=0.178 Sum_probs=116.1
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||.|+||.||++.+.. ++.+|+|.+...... .....+.+|+.+++.+. ||+|+++++++.+....|++|||+.+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYD-HPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH--HHHHHHHHHHHHHHhCC-CCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 368999999999999887 999999988754432 24567889999999995 99999999999999999999999999
Q ss_pred CcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. ..++...+..++.+++.||.|||++|++||||||+|||++.++.+|
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~ 133 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLK 133 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEE
Confidence 99999996 4578999999999999999999999999999999999999988764
No 321
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.71 E-value=3.7e-17 Score=191.08 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=109.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCc-eEEEe--------------eechhhhhccchHHHHHHHHHHHHhcCCCCc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSEN-FLSLK--------------RFSKQKVKCLGKEVQVLKEKNLMKSVSPSAC 831 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~-~~alK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~ 831 (908)
.+++|++++.||+|+||.||+|..+.... ..+.| .+.+...........+.+|+.+|+.++ |||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~-Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLN-HEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCC-CCC
Confidence 35789999999999999999997654322 22222 111111112223456789999999995 999
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHHHHc-C------CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLASILH-T------PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-~------~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
|+++++++.+.+..|++|+++. ++|..++. . ......++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 9999999999999999999994 57777764 2 23456788899999999999999999999999999999999
Q ss_pred CccC
Q 002560 905 GHLQ 908 (908)
Q Consensus 905 g~vK 908 (908)
|.+|
T Consensus 304 ~~vk 307 (501)
T PHA03210 304 GKIV 307 (501)
T ss_pred CCEE
Confidence 8765
No 322
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.71 E-value=7e-17 Score=175.82 Aligned_cols=136 Identities=14% Similarity=0.143 Sum_probs=116.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+|++.+.||+|+||.||++.+.. ....+++|.+..... ......+.+|+.+++.++ ||||+++++.+...+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~ 77 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVN-HPHVIKLYGACSQDGP 77 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCC-CCCEeeEEEEEecCCC
Confidence 57889999999999999998753 235788888764332 223467889999999995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCc
Q 002560 845 AGLLLNTYLACPLASILH--------------------------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDV 898 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--------------------------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~N 898 (908)
.|++|||+.+++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~n 157 (290)
T cd05045 78 LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARN 157 (290)
T ss_pred cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhhe
Confidence 999999999999999875 136788899999999999999999999999999999
Q ss_pred EEEcCCCccC
Q 002560 899 LMLDKSGHLQ 908 (908)
Q Consensus 899 ILi~~~g~vK 908 (908)
||+++++.+|
T Consensus 158 ill~~~~~~k 167 (290)
T cd05045 158 VLVAEGRKMK 167 (290)
T ss_pred EEEcCCCcEE
Confidence 9999888664
No 323
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.70 E-value=7.8e-17 Score=171.77 Aligned_cols=135 Identities=13% Similarity=0.179 Sum_probs=119.5
Q ss_pred eEEEEEecCCCeEEEEEEEECCCC----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSE----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
+++.+.||.|+||.||++.+...+ ..+|+|++...... .....+..|+.++..+ +|++|+++++.+.+.+..|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeE
Confidence 356789999999999999998766 89999998654321 2456888999999999 5999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CC--CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TP--LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~--l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+++++|.+++. .. +++..+..++.|++.||.|||++|++||||||+||+++.+|.+|
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~ 143 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVK 143 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEE
Confidence 9999999999999997 22 99999999999999999999999999999999999999988653
No 324
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.70 E-value=9.2e-17 Score=171.47 Aligned_cols=131 Identities=17% Similarity=0.185 Sum_probs=117.2
Q ss_pred EEecCCCeEEEEEEEECCC---CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++.+... +..+++|.+....... ....+.+|+.++..++ |++++++++++.+....|++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~lv~e~ 77 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLG-HPNVVRLLGVCTEEEPLYLVLEY 77 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcC-CCChheeeeeecCCCceEEEEEe
Confidence 3689999999999999865 8899999987654322 4678899999999996 99999999999999999999999
Q ss_pred CCCCcHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH-----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~-----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 78 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~ 145 (262)
T cd00192 78 MEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVK 145 (262)
T ss_pred ccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEE
Confidence 99999999986 2479999999999999999999999999999999999999988764
No 325
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.70 E-value=8e-17 Score=172.03 Aligned_cols=130 Identities=15% Similarity=0.208 Sum_probs=112.2
Q ss_pred EecCCCeEEEEEEEE--CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLL--RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~--~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+ ..++..+|+|++.... ......+.+.+|+.+++.+. ||+|+++++.+. ....+++|||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~-~~~~~lv~e~~~ 78 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLD-NPYIVRMIGICE-AESWMLVMELAE 78 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCC-CCCcceEEEEEc-CCCcEEEEecCC
Confidence 589999999999965 4567899999886433 22334567889999999995 999999998875 456799999999
Q ss_pred CCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. +.+++..+..++.|++.||.|||++||+||||||.|||++.++.+|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~k 135 (257)
T cd05116 79 LGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAK 135 (257)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEE
Confidence 999999997 6789999999999999999999999999999999999999888654
No 326
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.70 E-value=1.2e-16 Score=171.98 Aligned_cols=139 Identities=12% Similarity=0.174 Sum_probs=118.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC---CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
++-++|.+.+.||.|+||.||++.+... ...+++|....... ....+.+.+|+.+++.+. ||||+++++.+.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~-h~~i~~~~~~~~~- 78 (270)
T cd05056 3 IQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFD-HPHIVKLIGVITE- 78 (270)
T ss_pred echhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCC-CCchhceeEEEcC-
Confidence 3556799999999999999999987544 34789998754331 234567889999999995 9999999998876
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~ 147 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVK 147 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeE
Confidence 45789999999999999997 3589999999999999999999999999999999999999888664
No 327
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.70 E-value=8.1e-17 Score=176.53 Aligned_cols=140 Identities=14% Similarity=0.170 Sum_probs=118.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
.+..++|+..+.||+|+||.||++.+..++. .+|+|.+..... ......+.+|..+++.+. ||||+++++.+.
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~l~-h~niv~~~~~~~ 79 (303)
T cd05110 3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG--PKANVEFMDEALIMASMD-HPHLVRLLGVCL 79 (303)
T ss_pred ccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC--HHHHHHHHHHHHHHHhCC-CCCcccEEEEEc
Confidence 4567889999999999999999999877776 468887754321 222346788999999994 999999999886
Q ss_pred cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.. ..+++++|+++|+|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+|
T Consensus 80 ~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~k 149 (303)
T cd05110 80 SP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVK 149 (303)
T ss_pred CC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceE
Confidence 54 5679999999999999987 3689999999999999999999999999999999999999887654
No 328
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.70 E-value=1.1e-16 Score=171.03 Aligned_cols=129 Identities=11% Similarity=0.159 Sum_probs=110.4
Q ss_pred EecCCCeEEEEEEEEC--CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLR--DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++.+. ..+..+|+|++.... .....+.+.+|+.+++.+. ||+|+++++.+.. ...|+||||++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~-h~~ii~~~~~~~~-~~~~lv~e~~~ 77 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLD-NPYIVRMIGVCEA-EALMLVMEMAS 77 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcC-CCCeEEEEEEEcC-CCeEEEEEeCC
Confidence 3899999999998765 345579999886542 2234457889999999995 9999999998754 57899999999
Q ss_pred CCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~k 135 (257)
T cd05115 78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAK 135 (257)
T ss_pred CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEE
Confidence 999999986 5689999999999999999999999999999999999999887654
No 329
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.70 E-value=1.2e-16 Score=175.65 Aligned_cols=139 Identities=14% Similarity=0.200 Sum_probs=118.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS---- 842 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~---- 842 (908)
.+++|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||+|+++++.+...
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLK-HENVVNLIEICRTKATPY 87 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCC-CCCccceEEEEecccccc
Confidence 46789999999999999999999999999999998865432 1223345678999999995 99999999887554
Q ss_pred ----CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 ----MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ----~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+. ++|.+++. ..+++..++.++.|++.||.|||++|++|+||||+|||++.+|.+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~k 159 (310)
T cd07865 88 NRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILK 159 (310)
T ss_pred cCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEE
Confidence 34699999996 58888776 3689999999999999999999999999999999999999988764
No 330
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.70 E-value=6.4e-17 Score=179.92 Aligned_cols=137 Identities=15% Similarity=0.212 Sum_probs=120.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec----cCCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA----DSMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~----~~~~ 844 (908)
++|++.+.||.|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++ ||+|+++++.+. ....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFK-HDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcC-CCCccCHHHhccccCCCCce
Confidence 679999999999999999999999999999999875432 2234566788999999996 999999988775 3457
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|||+. ++|.+++. +.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~k 147 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELR 147 (334)
T ss_pred EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 899999995 68999986 6799999999999999999999999999999999999999998764
No 331
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.70 E-value=1.1e-16 Score=171.25 Aligned_cols=134 Identities=18% Similarity=0.273 Sum_probs=114.8
Q ss_pred EEEEEecCCCeEEEEEEEEC----CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 772 EWRKCLYSTDCSEIGLVLLR----DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~----~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
++.+.||.|.||.||++.+. ..+..+++|.++... .......+.+|+.+++++ +||||+++++++......++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~l 78 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS--SEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFL 78 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS--SHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc--ccccceeeeecccccccc-cccccccccccccccccccc
Confidence 56789999999999999987 345689999985422 223467899999999999 59999999999998888999
Q ss_pred EEecCCCCcHHHHHc-C---CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH-T---PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~-~---~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++|+|.++|. . .++......++.||+.||.|||+++|+|+||+|.||+++.++.+|
T Consensus 79 v~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~K 143 (259)
T PF07714_consen 79 VMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVK 143 (259)
T ss_dssp EEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEE
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999998 3 689999999999999999999999999999999999999998775
No 332
>PTZ00284 protein kinase; Provisional
Probab=99.70 E-value=1.2e-16 Score=185.83 Aligned_cols=134 Identities=13% Similarity=0.125 Sum_probs=110.4
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC-----CCCccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS-----PSACVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~-----~~~~i~~~~~~~~~ 841 (908)
..++|++.+.||+|+||.||+|.+..+++.||||+++... ........|+.+++.+. +++++++++.+|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3578999999999999999999999999999999986432 12233455666666653 34568888888865
Q ss_pred C-CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCC
Q 002560 842 S-MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 842 ~-~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g 905 (908)
. .++|+||+++ |++|.+++. +.+++..++.++.||+.||.|||+ .|||||||||+|||++.+|
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~ 269 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSD 269 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCC
Confidence 4 5789999988 778888886 679999999999999999999998 5999999999999998765
No 333
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.70 E-value=1.4e-16 Score=169.79 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=121.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..++..+|+|.+....... .....+.+|+.+++.++ |++|+++++.+.+....|+++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~-h~~i~~~~~~~~~~~~~~lv~ 78 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMK-HPNIVTFFASFQENGRLFIVM 78 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCC-CCChhhhhheeccCCeEEEEE
Confidence 5889999999999999999999999999999987654322 34457789999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 850 NTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 850 e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||+++|+|+||||+||++++++.
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~ 139 (257)
T cd08225 79 EYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM 139 (257)
T ss_pred ecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC
Confidence 9999999999986 24799999999999999999999999999999999999998763
No 334
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.70 E-value=5.1e-17 Score=177.53 Aligned_cols=136 Identities=18% Similarity=0.221 Sum_probs=120.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|.....||+|+||.||++.+..+++.+|+|.+..... .....+.+|+.++..+. ||+++++++.+...+..|++
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~-hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQ-HQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCC-CCchhhhhhheeeCCeEEEE
Confidence 345555679999999999999998999999999865332 23456888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 97 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~k 157 (297)
T cd06659 97 MEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVK 157 (297)
T ss_pred EecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEE
Confidence 99999999999887 6799999999999999999999999999999999999999988764
No 335
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.70 E-value=1.3e-16 Score=172.80 Aligned_cols=134 Identities=17% Similarity=0.310 Sum_probs=115.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeEEEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHAGLL 848 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~~iv 848 (908)
|++.+.||+|+||.||++.+..+++.+|+|.+++... .. ......+|+.++.++.+|+|++++++.+.+. +.+|++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6789999999999999999999999999998865432 11 2234457888899887799999999999887 899999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+. ++|.+.+. ..+++..+..++.|++.||.|||++||+||||||+||+++. |.+|
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~k 139 (282)
T cd07831 79 FELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILK 139 (282)
T ss_pred EecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeE
Confidence 99997 47777776 46899999999999999999999999999999999999998 7654
No 336
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.70 E-value=9.9e-17 Score=172.56 Aligned_cols=131 Identities=15% Similarity=0.137 Sum_probs=111.1
Q ss_pred EEecCCCeEEEEEEEEC--CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 775 KCLYSTDCSEIGLVLLR--DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
+.||+|+||.||++... .++..+|+|.++.... ......+.+|+.+++.++ ||||+++++.+.+....|++|||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 77 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQ-HSNLLQCLGQCTEVTPYLLVMEFC 77 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCC-CCCEeeEEEEEcCCCCcEEEEECC
Confidence 35899999999999764 3456899998765432 123346888999999995 999999999999999999999999
Q ss_pred CCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH-------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++|.+++. ..++...+..++.|++.||.|||++|++||||||+|||++.++++|
T Consensus 78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~k 140 (269)
T cd05087 78 PLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVK 140 (269)
T ss_pred CCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEE
Confidence 9999999986 1356778889999999999999999999999999999999887664
No 337
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.70 E-value=1.3e-16 Score=182.71 Aligned_cols=219 Identities=22% Similarity=0.346 Sum_probs=175.8
Q ss_pred CCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhccCCCCCCcceEEEEEEEC---
Q 002560 128 QDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRG--- 204 (908)
Q Consensus 128 ~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~~--- 204 (908)
.....||++||-+ -.....++...+..++..+.....+-.+.|+.+|...|+++-..+.. -|..++.+.+..
T Consensus 549 ~~~a~~g~~dgs~--n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~rklg~~g~~---lg~~~~~~~i~~d~~ 623 (1081)
T KOG0618|consen 549 NPQATFGCFDGSR--NSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNRKLGEEGQV---LGGSVVLCQIVEDSL 623 (1081)
T ss_pred CCcceEEEEcCCC--chhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhhhhhhcc---ccchhhheeeccccc
Confidence 4557999999999 66888888888888887665433334455999999999999655433 355566666642
Q ss_pred -----CEEEEEEeccceEEEEEEcCCeeEEEeCCCCC-CCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCC
Q 002560 205 -----RTIYVANSGDSRAVLAERRGKEIVAVDLSIDQ-TPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDD 278 (908)
Q Consensus 205 -----~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh-~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~ 278 (908)
.++++||||+|-++++++|+. .++|... -..+++|.+||...+|.|...+.+
T Consensus 624 ~~asS~~l~~Anvg~c~avls~ng~~----~p~t~~~~~~v~~eE~~RI~~~~g~i~ed~k~------------------ 681 (1081)
T KOG0618|consen 624 SPASSKTLFAANVGTCMAVLSRNGKP----LPTTRSPMLEVDREEYKRIVDSKGFITEDNKL------------------ 681 (1081)
T ss_pred CcccchhhhHhhhccchhhhhhcCCc----CcccccccccCCHHHHHHHHHhcCeecCCCee------------------
Confidence 578999999999999998863 3344443 344899999999999988432211
Q ss_pred CCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHHhccCCHHHHH
Q 002560 279 GDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYKDPRDAC 358 (908)
Q Consensus 279 ~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v~~~~~~~~~a 358 (908)
+|+ ...||++|....-+ +|.+.|+|..+.|++.|+|||+|+-+||++|+-+++++.+++..+|-.||
T Consensus 682 ---------ngv---t~~tR~iG~~~l~P-~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AA 748 (1081)
T KOG0618|consen 682 ---------NGV---TSSTRAIGPFSLFP-HVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAA 748 (1081)
T ss_pred ---------ece---eeeeeecccccccc-cccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHH
Confidence 222 57899999775544 59999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCC
Q 002560 359 AAIVAESYRLWLQYETRTDDITVIVVHINGLKN 391 (908)
Q Consensus 359 ~~Lv~~a~~~~~~~~g~~DNiTvivv~~~~~~~ 391 (908)
++|.+.|... |..||++|+||++.....
T Consensus 749 kKL~d~AqSY-----gc~~nv~vlVv~l~~~~~ 776 (1081)
T KOG0618|consen 749 KKLCDLAQSY-----GCAENVSVLVVRLNHLEE 776 (1081)
T ss_pred HHHHHHHHhc-----ccccCeeEEEEEeecchh
Confidence 9999999886 899999999999987755
No 338
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.70 E-value=8.4e-17 Score=177.57 Aligned_cols=122 Identities=13% Similarity=0.111 Sum_probs=103.5
Q ss_pred EEEecCCCeEEEEEEEEC--CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCeEEEEE
Q 002560 774 RKCLYSTDCSEIGLVLLR--DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMHAGLLL 849 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~--~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~~~iv~ 849 (908)
.+.||+|+||.||+|+++ .+++.+|+|.+.... ....+.+|+.+++.++ ||||+++++.+.. ...+|++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~ 79 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLF 79 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcC-CCCCcceeeeEecCCCcEEEEEE
Confidence 467999999999999976 367899999886432 2335678999999995 9999999998843 56789999
Q ss_pred ecCCCCcHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 850 NTYLACPLASILH-----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 850 e~~~gg~L~~~l~-----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
||+. ++|..++. ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 80 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~ 142 (317)
T cd07868 80 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred eccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEe
Confidence 9985 58888764 1489999999999999999999999999999999999994
No 339
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.70 E-value=3.6e-17 Score=165.18 Aligned_cols=129 Identities=16% Similarity=0.131 Sum_probs=97.4
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccch-----------------------HHHHHHHHHHHHhcCCCC
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGK-----------------------EVQVLKEKNLMKSVSPSA 830 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~~~~ 830 (908)
.+.||+|+||.||+|.+. +|+.+|+|+++......... ......|..++..+. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLV-TA 79 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHH-HC
Confidence 367999999999999987 89999999997643211110 123345889999984 55
Q ss_pred ccceeeeeeccCCeEEEEEecCCCCcHHHH-Hc-CCCCHHHHHHHHHHHHHHHHHH-HhCCcEecCCCCCcEEEcCCCcc
Q 002560 831 CVPQILCTCADSMHAGLLLNTYLACPLASI-LH-TPLDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 831 ~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~-l~-~~l~~~~~~~~~~qi~~aL~~L-H~~gIiHrDIKp~NILi~~~g~v 907 (908)
++...+.... . ..||||||++|+++... +. ..++...+..++.|++.+|.|| |++||+||||||+|||+++ |.+
T Consensus 80 ~v~~p~~~~~-~-~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~~-~~v 156 (190)
T cd05147 80 GIPCPEPILL-K-SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYHD-GKL 156 (190)
T ss_pred CCCCCcEEEe-c-CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEEC-CcE
Confidence 5533222221 2 23899999998877654 34 7899999999999999999999 7999999999999999984 544
No 340
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.70 E-value=2.4e-17 Score=157.90 Aligned_cols=139 Identities=16% Similarity=0.178 Sum_probs=120.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.-+++.-+..||+|+||.|-+.++..+|...|+|.+...- ..+...+.++|+.+..+...+|+++++|+.+.+...+|
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvw 121 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVW 121 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEE
Confidence 3455666788999999999999999999999999986543 23355678899999888778999999999999999999
Q ss_pred EEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
|.||.| ..+|..+.. +.++|..+-.++..++.||.|||++ .+||||+||+||||+.+|++|
T Consensus 122 IcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVK 189 (282)
T KOG0984|consen 122 ICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVK 189 (282)
T ss_pred EeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEE
Confidence 999998 457766654 6799999999999999999999986 899999999999999999987
No 341
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.70 E-value=9.4e-17 Score=171.41 Aligned_cols=125 Identities=16% Similarity=0.174 Sum_probs=108.6
Q ss_pred EEecCCCeEEEEEEEECCCC----------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 775 KCLYSTDCSEIGLVLLRDSE----------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~----------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
+.||+|+||.||++.+..++ ..+++|.+..... ....+.+|..+++.++ ||+|+++++++.. ..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~----~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~-~~ 74 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR----DSLAFFETASLMSQLS-HKHLVKLYGVCVR-DE 74 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh----hHHHHHHHHHHHHcCC-CcchhheeeEEec-CC
Confidence 36899999999999998766 3477777654331 1567888999999995 9999999998877 77
Q ss_pred EEEEEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 845 AGLLLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
.|++|||+++++|.+++. . .++...+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~ 138 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYG 138 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCc
Confidence 899999999999999997 3 689999999999999999999999999999999999999876
No 342
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.70 E-value=1.7e-16 Score=175.91 Aligned_cols=138 Identities=12% Similarity=0.131 Sum_probs=120.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-CCeEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD-SMHAG 846 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~-~~~~~ 846 (908)
-++|++.+.||.|+||.||++.+..+++.+|+|.+.+... .......+..|+.+++.++ |||+++++++|.. ....|
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS-TPVLAKRTYRELKLLKHLR-HENIISLSDIFISPLEDIY 86 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc-ccchhHHHHHHHHHHHhcC-CCCeeeEeeeEecCCCcEE
Confidence 3579999999999999999999999999999998765432 2234567788999999995 9999999998865 56899
Q ss_pred EEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+ +++|..++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 87 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~ 148 (328)
T cd07856 87 FVTELL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLK 148 (328)
T ss_pred EEeehh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEE
Confidence 999998 678999887 6789999999999999999999999999999999999999888654
No 343
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.70 E-value=1.4e-16 Score=169.13 Aligned_cols=130 Identities=12% Similarity=0.180 Sum_probs=113.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
+.||+|+||.||++... ++..+|+|.+..... ......+.+|+.+++.+. ||||+++++.+......|++|||+++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP--QELKIKFLSEARILKQYD-HPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCC-CCCcCeEEEEEecCCccEEEEECCCC
Confidence 36899999999999864 678999998765431 223446889999999994 99999999999999999999999999
Q ss_pred CcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 855 CPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|.+++. ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+|
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~ 133 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLK 133 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEE
Confidence 99999986 4578999999999999999999999999999999999999888654
No 344
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.70 E-value=1.5e-16 Score=175.60 Aligned_cols=138 Identities=13% Similarity=0.178 Sum_probs=121.9
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|...+.||+|+||.||++.+..++..+|+|.+.............+.+|+.+++.+. |||++++++.+.+....|++
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK-HPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC-CCCEEEEEEEEeeCCeEEEE
Confidence 45888999999999999999999999999999987654434445567889999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+.| +|.+.+. ..+++..+..++.|++.||.|||++||+||||+|+||+++.+|.+|
T Consensus 104 ~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~k 165 (317)
T cd06635 104 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVK 165 (317)
T ss_pred EeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEE
Confidence 999975 7777764 6689999999999999999999999999999999999999888764
No 345
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.70 E-value=1.3e-16 Score=169.25 Aligned_cols=131 Identities=27% Similarity=0.408 Sum_probs=120.2
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||.|+||.||++.+..+++.+++|++.+...........+..|+.+++.++ ||++++++..+.+....|++|||+++++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN-HPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC-CCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 689999999999999889999999998776555556778899999999996 9999999999999999999999999999
Q ss_pred HHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 857 LASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 857 L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|.+++. ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.+|
T Consensus 80 L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~ 133 (250)
T cd05123 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIK 133 (250)
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEE
Confidence 999997 5789999999999999999999999999999999999999987653
No 346
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.69 E-value=1.2e-16 Score=174.85 Aligned_cols=139 Identities=12% Similarity=0.208 Sum_probs=119.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC---
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM--- 843 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~--- 843 (908)
..++|++.+.||.|+||.||++.++.+++.+|+|.+..... .......+.+|+.+++.++ |||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~-h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLN-HRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCC-CCCeeeeeheecCcchhh
Confidence 46889999999999999999999999999999999865432 1223346778999999995 999999998886654
Q ss_pred -------eEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 -------HAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 -------~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++|++|||+++ +|...+. ..+++..++.++.|++.||.|||++||+||||||+||++++++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEE
Confidence 89999999976 6777665 4689999999999999999999999999999999999999988764
No 347
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.69 E-value=3.4e-17 Score=181.22 Aligned_cols=137 Identities=10% Similarity=0.176 Sum_probs=120.0
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh-ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe--EEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH--AGL 847 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~--~~i 847 (908)
.++...||+|+|-+||++.+..+|-.||.-.++...+. .....+++..|+.+|+.|+ ||||+++|.+|.+... +-+
T Consensus 42 ~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~-H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK-HPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred eehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC-CCceeeeeeheecCCCceeee
Confidence 44557899999999999999999999997766655543 3455689999999999995 9999999999987655 788
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcC-CCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~-~g~vK 908 (908)
|+|++.+|+|..|++ +.++...++.|++||+.||.|||++. |||||||.+||+|+. -|.||
T Consensus 121 iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VK 186 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVK 186 (632)
T ss_pred eeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCcee
Confidence 999999999999998 88999999999999999999999996 999999999999984 46554
No 348
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.69 E-value=2e-16 Score=176.71 Aligned_cols=138 Identities=14% Similarity=0.186 Sum_probs=119.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
.++|++.+.||+|+||.||++.+..+++.||+|++.+... .......+.+|+.+++.++ ||||+++++.+...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSLEE 93 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch-hhHHHHHHHHHHHHHHHcC-CCcccceeeeeeecccccc
Confidence 3779999999999999999999999999999999865321 2223456788999999995 99999999887543
Q ss_pred -CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++++++ +++|.+++. ..+++..++.++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 94 ~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 94 FNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEE
Confidence 4578888887 789998887 6799999999999999999999999999999999999999998764
No 349
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.69 E-value=1.7e-16 Score=172.09 Aligned_cols=135 Identities=13% Similarity=0.226 Sum_probs=120.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeEEEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHAGLL 848 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~~iv 848 (908)
|++.+.||.|+||.||++.+..+++.+|+|.+.... ........+.+|+.+++.+. ||+++++++.+.+. ...|++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~lv 78 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLR-HPNIVRLKEIVTSKGKGSIYMV 78 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhcc-CCCeeeheeeEecCCCCcEEEE
Confidence 678999999999999999999999999999998654 22334556888999999996 99999999999887 899999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+++ +|..++. ..+++..+..++.|++.||.|||++|++|+||||+|||++++|.+|
T Consensus 79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~ 140 (287)
T cd07840 79 FEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLK 140 (287)
T ss_pred eccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEE
Confidence 999974 8888886 3699999999999999999999999999999999999999988764
No 350
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.69 E-value=1.1e-16 Score=156.78 Aligned_cols=136 Identities=16% Similarity=0.210 Sum_probs=120.9
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
-+....|.+++.||+|+||.+|++....+|..||+|+-+... ...++..|..+...|++...|+.+..+..+..+
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y 85 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDY 85 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence 346788999999999999999999999999999999865433 234678899999999888899999999999999
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
-.+||+.+ |.+|.++++ ..|+..++..++-|++.-++|+|.+++|||||||+|+|..-+-+
T Consensus 86 nvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh 149 (341)
T KOG1163|consen 86 NVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRH 149 (341)
T ss_pred ceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccc
Confidence 99999988 889888887 88999999999999999999999999999999999999875443
No 351
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.69 E-value=1.9e-16 Score=176.07 Aligned_cols=137 Identities=15% Similarity=0.151 Sum_probs=116.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCC--CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec----cCC
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDS--ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA----DSM 843 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~--~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~----~~~ 843 (908)
+|++.+.||+|+||.||++.+..+ +..+|+|.+.... ........+.+|+.+++.+.+||||+++++.+. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 8899999886432 122234567889999999977999999987642 235
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|+|+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+|
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~k 145 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELK 145 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEE
Confidence 6889999985 68999886 7799999999999999999999999999999999999999988764
No 352
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=5.1e-17 Score=179.26 Aligned_cols=130 Identities=16% Similarity=0.264 Sum_probs=116.4
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCC
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLA 854 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~g 854 (908)
-+||+|+||+||.+++..+....|+|-+.... ....+-+..|+.+.+.|+ |.||+++++.+..++++-|.||-++|
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~Lr-HkNIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLR-HKNIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHh-hHhHHHHhhccCCCCeEEEEeecCCC
Confidence 36999999999999999999999999886433 334556788999999996 99999999999999999999999999
Q ss_pred CcHHHHHc---CCC--CHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCccC
Q 002560 855 CPLASILH---TPL--DEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 855 g~L~~~l~---~~l--~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~vK 908 (908)
|+|.++|+ +++ ++.+.-+|.+||++||.|||++.|+|||||-+|+||+. .|.+|
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlK 716 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLK 716 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEE
Confidence 99999998 777 89999999999999999999999999999999999973 55543
No 353
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.69 E-value=2.6e-16 Score=170.96 Aligned_cols=135 Identities=14% Similarity=0.221 Sum_probs=120.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.|...+.||+|++|.||++.+..+++.+++|.+.... ......+.+|+.+++.+. ||+++++++.+...++.|+++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~e~~~l~~~~-h~~vv~~~~~~~~~~~~~~v~ 95 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HPNIVEMYSSYLVGDELWVVM 95 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc---hhHHHHHHHHHHHHHHcC-CCChheEEEEEEcCCeEEEEE
Confidence 3555679999999999999999899999999875332 223456889999999985 999999999999999999999
Q ss_pred ecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. .++++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 96 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~ 155 (285)
T cd06648 96 EFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVK 155 (285)
T ss_pred eccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEE
Confidence 9999999999998 7799999999999999999999999999999999999999988764
No 354
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.69 E-value=1.4e-16 Score=171.24 Aligned_cols=130 Identities=12% Similarity=0.099 Sum_probs=108.6
Q ss_pred EecCCCeEEEEEEEECCC--CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 776 CLYSTDCSEIGLVLLRDS--ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~--~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
.||+|+||.||++..... ...+++|.+..... ......+.+|..+++.++ ||||+++++.+.+....|++|||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~~~~l~-h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS--SKEQNEFLQQGDPYRILQ-HPNILQCLGQCVEAIPYLLVFEYCE 78 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC--hHHHHHHHHHHHHHhccC-CcchhheEEEecCCCccEEEEecCC
Confidence 599999999999975433 23566776554321 223567899999999985 9999999999999999999999999
Q ss_pred CCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 854 ACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 854 gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++|.+++. ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+|
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~ 139 (268)
T cd05086 79 LGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVK 139 (268)
T ss_pred CCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEE
Confidence 999999986 2356777889999999999999999999999999999999888764
No 355
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.69 E-value=2.2e-16 Score=168.12 Aligned_cols=137 Identities=15% Similarity=0.146 Sum_probs=122.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..+++.+++|.+....... .....+..|+.+++.++ |++|+++++.+.+....|++|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVN-HPNIISYKEAFLDGNKLCIVM 78 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCC-CCCchhhhhhhccCCEEEEEe
Confidence 5889999999999999999999999999999987654332 34556788999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+|
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~k 143 (256)
T cd08530 79 EYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVK 143 (256)
T ss_pred hhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEE
Confidence 9999999999885 3589999999999999999999999999999999999999887654
No 356
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.69 E-value=3.5e-16 Score=166.55 Aligned_cols=137 Identities=16% Similarity=0.221 Sum_probs=122.7
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||.|+||.||++.+..+++.+++|++..... .......+..|+++++.++ ||+++++++.+......+++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~~~~~~~~~~~~~~~~lv~ 78 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLN-HPNIIKYYESFEEKGKLCIVM 78 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcC-CCChhheEEEEecCCEEEEEE
Confidence 58899999999999999999998999999999865442 2234567889999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.+++.||.|||++|++|+||+|+||+++.++.+|
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~ 143 (258)
T cd08215 79 EYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVK 143 (258)
T ss_pred EecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEE
Confidence 9999999999886 4589999999999999999999999999999999999999887653
No 357
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.69 E-value=1.7e-16 Score=169.41 Aligned_cols=130 Identities=12% Similarity=0.077 Sum_probs=114.3
Q ss_pred EEecCCCeEEEEEEEECC-CCc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEec
Q 002560 775 KCLYSTDCSEIGLVLLRD-SEN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~-~~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+.||+|+||.||++.+.. .++ .+|+|.+...... .....+.+|+.++++++ ||||+++++.+.+ ...|++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~-~~~~~v~e~ 76 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLD-HENLIRLYGVVLT-HPLMMVTEL 76 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcC-CCCccceeEEEcC-CeEEEEEEe
Confidence 368999999999998865 333 6899998776543 45678899999999995 9999999999888 899999999
Q ss_pred CCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 852 YLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 852 ~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.++.+|
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~k 137 (257)
T cd05040 77 APLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVK 137 (257)
T ss_pred cCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEE
Confidence 99999999996 2589999999999999999999999999999999999999988764
No 358
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.68 E-value=3.8e-16 Score=166.29 Aligned_cols=137 Identities=16% Similarity=0.227 Sum_probs=123.6
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC--CeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS--MHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~--~~~~i 847 (908)
+|++.+.||+|++|.||++.+..+++.+++|++...... ......+.+|+.++++++ ||+|+++++.+.+. ...|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~l 78 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQ-HPNIVRYYGSERDEEKNTLNI 78 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcC-CCCEeeEEEEEecCCCCeEEE
Confidence 488899999999999999999989999999998765432 335677889999999996 99999999999888 89999
Q ss_pred EEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.+|.+|
T Consensus 79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~ 141 (260)
T cd06606 79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVK 141 (260)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEE
Confidence 999999999999997 5799999999999999999999999999999999999999887654
No 359
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.68 E-value=2.3e-16 Score=169.12 Aligned_cols=128 Identities=16% Similarity=0.180 Sum_probs=108.2
Q ss_pred EEecCCCeEEEEEEEECCC------------CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 775 KCLYSTDCSEIGLVLLRDS------------ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~------------~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
+.||+|+||.||++..... ...+++|.+.... ......+..|..++..++ ||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~l~~l~-hp~iv~~~~~~~~~ 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH---RDISLAFFETASMMRQVS-HKHIVLLYGVCVRD 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh---hhHHHHHHHHHHHHHhCC-CCCEeeEEEEEecC
Confidence 3689999999999975322 2357888875533 223456788889999985 99999999999999
Q ss_pred CeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 843 MHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
...+++|||+++++|..++. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.
T Consensus 77 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~ 143 (262)
T cd05077 77 VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGI 143 (262)
T ss_pred CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCc
Confidence 99999999999999998886 46899999999999999999999999999999999999987653
No 360
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.68 E-value=3.9e-16 Score=165.47 Aligned_cols=135 Identities=13% Similarity=0.222 Sum_probs=123.0
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+|++.+.||+|++|.||++.+..+++.+++|++..... .....+.+|+.+++.+. |++++++++.+......|+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l~~ 76 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCK-HPNIVKYYGSYLKKDELWIVM 76 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCC-CCCEeEEEEEEecCCeEEEEE
Confidence 58899999999999999999998999999999876442 34567889999999996 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 850 NTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 850 e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.+|.+|
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~ 138 (253)
T cd05122 77 EFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVK 138 (253)
T ss_pred ecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEE
Confidence 9999999999987 3789999999999999999999999999999999999999888654
No 361
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.68 E-value=3.4e-16 Score=172.42 Aligned_cols=136 Identities=13% Similarity=0.186 Sum_probs=119.9
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|...+.||+|+||.||++.+..+++.+++|.+.............+.+|+.+++.++ ||+++++++.+.+....|++||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e 101 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK-HPNTIEYKGCYLKEHTAWLVME 101 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC-CCCCccEEEEEEeCCEEEEEEe
Confidence 666788999999999999999999999999987654444445567889999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+. ++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 102 ~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~k 161 (313)
T cd06633 102 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVK 161 (313)
T ss_pred cCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEE
Confidence 996 57777775 5689999999999999999999999999999999999999888664
No 362
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.68 E-value=2.3e-16 Score=175.76 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=118.5
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS-----M 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~-----~ 843 (908)
+.|++.+.||+|+||.||++.+..+++.+|+|.+..... .......+.+|+.+++.++ ||||+++++.+... .
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~-h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLD-HENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcC-CCCccchHHheecccccccC
Confidence 469999999999999999999999999999999865432 2233456778999999995 99999999877543 3
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..|++|||+. ++|.+++. +.+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~k 148 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLK 148 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEE
Confidence 5899999995 68988886 6799999999999999999999999999999999999999888764
No 363
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.68 E-value=1.5e-16 Score=167.66 Aligned_cols=120 Identities=22% Similarity=0.260 Sum_probs=104.9
Q ss_pred CCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHH
Q 002560 780 TDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLAS 859 (908)
Q Consensus 780 G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~ 859 (908)
|.||.||+|+++.+++.||+|.+.+... ...|...+... .|||++++++.+.+....|++|||+++++|.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 74 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWS 74 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHH
Confidence 8899999999999999999999876531 22333344443 48999999999999999999999999999999
Q ss_pred HHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 860 ILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 860 ~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 75 ~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~ 125 (237)
T cd05576 75 HISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQ 125 (237)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEE
Confidence 987 5799999999999999999999999999999999999999988654
No 364
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.68 E-value=2.7e-16 Score=170.81 Aligned_cols=136 Identities=15% Similarity=0.196 Sum_probs=123.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.+.|++.+.||+|+||.||++.+..++..+++|++..... ....+.+|+.+++.++ |+|++++++.+......|+
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCK-HPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCC-CCCeeEEEEEEEECCEEEE
Confidence 4568888999999999999999998899999999875432 4567889999999995 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc--C-CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 848 LLNTYLACPLASILH--T-PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 848 v~e~~~gg~L~~~l~--~-~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++||+++++|.+++. . .++...+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~ 156 (286)
T cd06614 93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVK 156 (286)
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEE
Confidence 999999999999998 3 799999999999999999999999999999999999999988764
No 365
>PRK10345 hypothetical protein; Provisional
Probab=99.68 E-value=2.6e-16 Score=160.42 Aligned_cols=123 Identities=10% Similarity=0.081 Sum_probs=99.6
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC----CCCccceeeeeeccCC---eEE
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS----PSACVPQILCTCADSM---HAG 846 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~----~~~~i~~~~~~~~~~~---~~~ 846 (908)
.+.||+|+||.||. ++.++.. ++|++.... ....+.+.+|+.+++.+. .||||+++|+++.++. .+|
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 46799999999995 7766665 689876532 223467899999999994 3899999999998874 444
Q ss_pred -EEEec--CCCCcHHHHHc-CCCCHHHHHHHHHHHHHHH-HHHHhCCcEecCCCCCcEEEcCC
Q 002560 847 -LLLNT--YLACPLASILH-TPLDEQSARFCAASVVAAL-EDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 847 -iv~e~--~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL-~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
+|||| +++++|.+++. +.+++. ..++.|++.++ +|||+++|+||||||+|||++..
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~ 141 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRI 141 (210)
T ss_pred EEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEecc
Confidence 78999 66799999998 556665 35688888888 99999999999999999999853
No 366
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.68 E-value=1.7e-16 Score=172.60 Aligned_cols=139 Identities=14% Similarity=0.199 Sum_probs=118.3
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|+..+.||+|+||.||++.+..+++.+|+|.+.+.... .....+.+|+.++.++..||||+++++.+......|
T Consensus 2 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~ 79 (288)
T cd06616 2 TAEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCW 79 (288)
T ss_pred cHHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEE
Confidence 356788889999999999999999999999999998754322 345578899999999866999999999999999999
Q ss_pred EEEecCCCCcHHHHH---c----CCCCHHHHHHHHHHHHHHHHHHHhC-CcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASIL---H----TPLDEQSARFCAASVVAALEDLHKR-GVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l---~----~~l~~~~~~~~~~qi~~aL~~LH~~-gIiHrDIKp~NILi~~~g~vK 908 (908)
++|||+. ++|.++. . ..+++..+..++.|++.||.|||+. ||+||||||+|||++.+|.+|
T Consensus 80 ~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~k 148 (288)
T cd06616 80 ICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIK 148 (288)
T ss_pred EEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEE
Confidence 9999985 4554432 1 5689999999999999999999974 999999999999999888654
No 367
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.68 E-value=1.6e-16 Score=173.05 Aligned_cols=132 Identities=16% Similarity=0.247 Sum_probs=118.1
Q ss_pred EEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 773 ~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
....||+|+||.||++....+++.+|+|.+.... ......+.+|+.+++.++ |++++++++.+...++.|++|||+
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~lv~e~~ 99 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQ-HENVVEMYNSYLVGDELWVVMEFL 99 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcC-CcchhheeeEEEeCCEEEEEEecC
Confidence 3467999999999999999999999999875322 234556889999999995 999999999999999999999999
Q ss_pred CCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~ 156 (292)
T cd06657 100 EGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVK 156 (292)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEE
Confidence 9999999887 6789999999999999999999999999999999999999988654
No 368
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.68 E-value=1.6e-16 Score=177.10 Aligned_cols=139 Identities=14% Similarity=0.212 Sum_probs=119.9
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc--CCeE
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD--SMHA 845 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~--~~~~ 845 (908)
.++|++.+.||+|+||.||++.+..+++.+|+|.+.+... .......+.+|+.++..+.+||||+++++++.. ....
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 5679999999999999999999998999999998865322 222345677899999999559999999998754 3468
Q ss_pred EEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 846 GLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+||||+. ++|..++. +.+++.....++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~k 147 (337)
T cd07852 85 YLVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVK 147 (337)
T ss_pred EEEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEE
Confidence 99999997 59999887 6789999999999999999999999999999999999999998764
No 369
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.67 E-value=2.9e-16 Score=175.22 Aligned_cols=132 Identities=15% Similarity=0.198 Sum_probs=115.6
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC------
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS------ 842 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~------ 842 (908)
.+|++.+.||.|+||.||++.+..+++.+|+|.+..... .....+.+|+.+++.++ ||+|+++++.+...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLD-HDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcC-CCcchhhHhhhccccccccc
Confidence 679999999999999999999999999999998865432 34567889999999995 99999998766543
Q ss_pred --------CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 843 --------MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 843 --------~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
...|++|||+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~ 151 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTED 151 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCC
Confidence 46899999996 58988887 7799999999999999999999999999999999999998543
No 370
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.67 E-value=3e-16 Score=170.08 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=119.4
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|++|.||++.+..++..+|+|++..... .......+.+|+.+++.++ ||+++++++.+.+....|++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~-~~~iv~~~~~~~~~~~~~iv~e 78 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELN-HPNIVRLLDVVHSENKLYLVFE 78 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcC-CCCccCHhheeccCCeEEEEEe
Confidence 6788999999999999999999999999999875432 2233456788999999996 9999999999999999999999
Q ss_pred cCCCCcHHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+. ++|.+++. . .+++..+..++.|++.||.|||+++++||||+|+||+++.+|.+|
T Consensus 79 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~ 139 (283)
T cd07835 79 FLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALK 139 (283)
T ss_pred ccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEE
Confidence 995 68999886 3 589999999999999999999999999999999999999888664
No 371
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.67 E-value=3.2e-16 Score=172.28 Aligned_cols=139 Identities=17% Similarity=0.231 Sum_probs=117.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc-----
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD----- 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~----- 841 (908)
.+++|++.+.||.|+||.||++.+..+++.+|+|.+....... .....+.+|+.+++.++ ||+|+++++.+.+
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~ 83 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLK-HPNVVPLIDMAVERPDKS 83 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcC-CCCccchhhheecccccc
Confidence 3789999999999999999999999999999999886543221 22345678999999995 9999999987643
Q ss_pred ---CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 ---SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ---~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+|++|+|+.+ +|...+. ..+++..+..++.|++.||.|||++||+||||||+|||++++|.+|
T Consensus 84 ~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~ 155 (311)
T cd07866 84 KRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILK 155 (311)
T ss_pred cccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEE
Confidence 3457999999964 6776665 4799999999999999999999999999999999999999988764
No 372
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.67 E-value=4.2e-16 Score=170.21 Aligned_cols=141 Identities=18% Similarity=0.288 Sum_probs=120.7
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+.+++|++.+.||+|+||.||++.+..+++.+|+|.+.+.... .....+..|..++.....||+|+++++++.+...
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 88 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK--EENKRILMDLDVVLKSHDCPYIVKCYGYFITDSD 88 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh--HHHHHHHHHHHHHHhccCCCchHhhheeeecCCe
Confidence 55789999999999999999999999988999999998754321 2344566777777776569999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+. ++|..++. ..+++..+..++.|++.||.|||+ +||+||||+|+||+++.++.+|
T Consensus 89 ~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~k 155 (296)
T cd06618 89 VFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVK 155 (296)
T ss_pred EEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEE
Confidence 999999985 46766664 668999999999999999999997 6999999999999999888764
No 373
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.67 E-value=4.3e-16 Score=177.80 Aligned_cols=136 Identities=13% Similarity=0.169 Sum_probs=123.4
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-----cCC
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA-----DSM 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~-----~~~ 843 (908)
+-|++.+.||.|.+|.||+++++.+++..|+|++.... ...+.+..|.+||+.+++|||++.+|++|. .++
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 55999999999999999999999999999999976543 234567789999999999999999999874 356
Q ss_pred eEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+|||||.||+..++++ ..+.|..+.+|+..++.||.+||.+.+||||||-.|||++.+|.||
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VK 163 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVK 163 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEE
Confidence 8999999999999999998 6799999999999999999999999999999999999999999886
No 374
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.67 E-value=3.1e-16 Score=174.58 Aligned_cols=137 Identities=12% Similarity=0.175 Sum_probs=117.9
Q ss_pred ceE-EEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccc-----------hHHHHHHHHHHHHhcCCCCccceeee
Q 002560 770 DME-WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG-----------KEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 770 ~~~-~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
.|. +.+.||.|+||.||++.+..+++.+|+|.+......... ....+.+|+.+++.++ ||||+++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~~iv~~~~ 87 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK-HENIMGLVD 87 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC-CcceeeeeE
Confidence 354 457799999999999999999999999998654322210 1124778999999995 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 838 TCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++......|++|||+. ++|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.+|.+|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEE
Confidence 9999999999999996 68999887 6789999999999999999999999999999999999999988764
No 375
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.67 E-value=3.2e-16 Score=175.01 Aligned_cols=138 Identities=14% Similarity=0.208 Sum_probs=120.4
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe---
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH--- 844 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~--- 844 (908)
-++|++.+.||+|+||.||++.+..+++.+|+|++.... ........+.+|+.+++.+ .||+++++++.+.....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccccc
Confidence 467999999999999999999999999999999886532 1223445678899999999 49999999887766554
Q ss_pred ---EEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 ---AGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ---~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|+++||+ +++|.+++. ..+++..+..++.|++.||.|||++||+||||||+||+++.+|.+|
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELK 158 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEE
Confidence 89999998 679999988 7899999999999999999999999999999999999999988664
No 376
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.66 E-value=5.2e-16 Score=171.23 Aligned_cols=121 Identities=15% Similarity=0.132 Sum_probs=102.4
Q ss_pred EEecCCCeEEEEEEEECC--CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec--cCCeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLRD--SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA--DSMHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~--~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~--~~~~~~iv~e 850 (908)
..||+|+||.||+|..+. ++..+|+|.+.... ....+.+|+.+++.++ ||||+++++.+. ....+|++||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELK-HPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCC-CCCeeeEEEEEeccCCCeEEEEEe
Confidence 579999999999999754 56799999886532 2345778999999995 999999999874 4568899999
Q ss_pred cCCCCcHHHHHc-----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 851 TYLACPLASILH-----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 851 ~~~gg~L~~~l~-----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
|+. ++|.+++. ..+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~ 142 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEc
Confidence 986 57777763 2478999999999999999999999999999999999993
No 377
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.66 E-value=7.4e-16 Score=166.78 Aligned_cols=140 Identities=19% Similarity=0.206 Sum_probs=119.5
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECC----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRD----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+.-++|++.+.||+|+||.||++.+.. ++..+++|.+.... .......+.+|..+++.+ .|||++++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~ 79 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA--SEIQVTLLLQESCLLYGL-SHQNILPILHVCIE 79 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEec
Confidence 456789999999999999999999876 35788999876432 333466788999999999 59999999987554
Q ss_pred -CCeEEEEEecCCCCcHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 -SMHAGLLLNTYLACPLASILH----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 -~~~~~iv~e~~~gg~L~~~l~----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....+++++|+++++|..++. ..+++..+..++.|++.||.|||+++++||||||+|||++.++.+|
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~k 157 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVK 157 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEE
Confidence 577899999999999999986 1378999999999999999999999999999999999999887654
No 378
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.66 E-value=3.3e-16 Score=173.88 Aligned_cols=136 Identities=15% Similarity=0.228 Sum_probs=120.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----e
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM-----H 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~-----~ 844 (908)
+|++.+.||.|+||.||+|.+..+++.+|+|.+.+.. ........+.+|+.+++.++ ||+|+++++.+.+.. .
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLR-HENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcC-CcchhhhhhhhcccCcccccc
Confidence 4899999999999999999999899999999887543 22334567889999999995 999999999887765 7
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|++|+|+. ++|.+++. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~ 143 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLK 143 (330)
T ss_pred eEEEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEE
Confidence 999999997 58988887 5799999999999999999999999999999999999999988764
No 379
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.66 E-value=8.1e-17 Score=160.24 Aligned_cols=139 Identities=17% Similarity=0.168 Sum_probs=121.7
Q ss_pred ccccccccc-ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee-e
Q 002560 761 SSLAKVSLT-DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC-T 838 (908)
Q Consensus 761 ~~~~~~~~~-~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~-~ 838 (908)
.++..+++. .|.+.+.||+|-||.+-+|+++.++..+++|.+.+... ....+.+|...--.|.+|.||+.-|+ .
T Consensus 15 ~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t----t~~dF~rEfhY~~~Ls~H~hIi~tY~va 90 (378)
T KOG1345|consen 15 EELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT----TQADFVREFHYSFFLSPHQHIIDTYEVA 90 (378)
T ss_pred ccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh----hHHHHHHHhccceeeccchhhhHHHHHH
Confidence 344455554 49999999999999999999999999999999877653 45678888887777788999988885 5
Q ss_pred eccCCeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 839 CADSMHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 839 ~~~~~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
|+..+...++|||++.|+|..-+. ..+-|...+.++.|++.||.|||+++++|||||.+||||-.
T Consensus 91 Fqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~ 156 (378)
T KOG1345|consen 91 FQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD 156 (378)
T ss_pred hhcCceEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec
Confidence 888899999999999999999888 78999999999999999999999999999999999999964
No 380
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.66 E-value=5.9e-16 Score=170.57 Aligned_cols=126 Identities=13% Similarity=0.180 Sum_probs=110.1
Q ss_pred CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHHH
Q 002560 781 DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASI 860 (908)
Q Consensus 781 ~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~ 860 (908)
++|.||+++...+++.+|+|+++.... .......+.+|+.+++.++ ||||+++++.+.+....|++|||+++++|.++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~-h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~ 89 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQ-HPNILPYVTSFIVDSELYVVSPLMAYGSCEDL 89 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcC-CcchhhhhheeecCCeEEEEEeccCCCCHHHH
Confidence 445667777777999999999876432 2335678999999999995 99999999999999999999999999999999
Q ss_pred Hc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 861 LH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 861 l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+. ..+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 90 l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~k 141 (314)
T cd08216 90 LKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVV 141 (314)
T ss_pred HHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceE
Confidence 86 4589999999999999999999999999999999999999888764
No 381
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.66 E-value=8.9e-16 Score=166.58 Aligned_cols=136 Identities=15% Similarity=0.216 Sum_probs=116.4
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeeeccCCe----
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTCADSMH---- 844 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~~~~~~---- 844 (908)
|++.+.||+|+||.||++++..+++.+|+|.+..... .......+.+|+.+++.+. .||+++++++.+.+...
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6789999999999999999998899999999875432 2223445667888877763 49999999999987776
Q ss_pred -EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 -AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 -~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.|++|||+. ++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+|
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~ 147 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVK 147 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEE
Confidence 999999996 48888876 3589999999999999999999999999999999999999988764
No 382
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.66 E-value=5.6e-16 Score=167.93 Aligned_cols=135 Identities=14% Similarity=0.236 Sum_probs=117.7
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|+||.||++....+++.+++|.+...... .......+|...+..+..||+++++++.+.+....|++||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 67889999999999999999989999999988654321 1223445788889998659999999999999999999999
Q ss_pred cCCCCcHHHHHc--C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH--T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~--~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+ +++|.+++. . .+++..+..++.|++.+|.|||++|++|+||||+||+++.++.+|
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~ 139 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVK 139 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEE
Confidence 99 789998886 2 689999999999999999999999999999999999999987654
No 383
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.66 E-value=5.4e-16 Score=166.72 Aligned_cols=139 Identities=17% Similarity=0.205 Sum_probs=118.2
Q ss_pred ceEEEEEecCCCeEEEEEEEECC-CCceEEEeeechhhh-------hccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRD-SENFLSLKRFSKQKV-------KCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~-~~~~~alK~~~~~~~-------~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
+|++.+.||+|+||.||++.+.. +++.+|+|.+..... ........+..|..++...-.||||+++++.+..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 678999998764321 1122345677888888764469999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++.|++|||+++++|.+++. ..+++..++.++.|++.||.|||+ .|++|+||||+|||++.++.+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~ 154 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVT 154 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEE
Confidence 999999999999999998873 468999999999999999999996 7899999999999999988654
No 384
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.66 E-value=6.5e-16 Score=165.38 Aligned_cols=131 Identities=18% Similarity=0.141 Sum_probs=108.9
Q ss_pred EEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-cCCeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA-DSMHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~-~~~~~~iv~e 850 (908)
+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|..+++.++ ||+++++++.+. .+...|++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~-h~~iv~~~~~~~~~~~~~~lv~e 77 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT--DLEEVEQFLKEGIIMKDFS-HPNVLSLLGICLPSEGSPLVVLP 77 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC--CHHHHHHHHHHHHHHccCC-CCCcceEEEEeecCCCCcEEEEe
Confidence 368999999999998753 34579999875322 2234567888999999985 999999999654 5567899999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+.+++|.+++. ..++...+..++.|++.||.|||+++|+||||||+|||+++++.+|
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~k 138 (262)
T cd05058 78 YMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVK 138 (262)
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEE
Confidence 999999999996 3467788889999999999999999999999999999999988764
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=4.8e-18 Score=166.99 Aligned_cols=138 Identities=15% Similarity=0.220 Sum_probs=117.2
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec-------
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA------- 840 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~------- 840 (908)
.+.|+.+.++|+|.||.||+++.+++++.+|+|++-... .+.+.....++|+.+|..++ |+|++.+...+.
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lk-Henv~nliEic~tk~Tp~~ 93 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLK-HENVVNLIEICRTKATPTN 93 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhc-chhHHHHHHHHhhccCCcc
Confidence 456777889999999999999999999999998764422 23344556789999999995 999988876553
Q ss_pred -cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 841 -DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 841 -~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+...+|+||.+|+. +|.-+|. .+++..+++.++.+++.||.|+|++.|+|||+||+|+||+.+|.+|
T Consensus 94 r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilk 164 (376)
T KOG0669|consen 94 RDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILK 164 (376)
T ss_pred cccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEE
Confidence 33469999999964 8998887 5799999999999999999999999999999999999999999875
No 386
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.66 E-value=5.4e-16 Score=170.43 Aligned_cols=138 Identities=14% Similarity=0.167 Sum_probs=120.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+.|+..+.||.|+||.||++.+..++..+|+|.+.............+.+|+.+++.+. |++++++++++......|+|
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC-CCCcccEEEEEEcCCeeEEE
Confidence 44777889999999999999999999999999986543333344567888999999995 99999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|||+. ++|.+++. ..+++..+..++.|++.||.|||++|++||||||+|||++.+|.+|
T Consensus 94 ~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~k 155 (308)
T cd06634 94 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVK 155 (308)
T ss_pred EEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEE
Confidence 99996 57777764 5689999999999999999999999999999999999999988764
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.65 E-value=2.4e-17 Score=163.54 Aligned_cols=144 Identities=14% Similarity=0.225 Sum_probs=123.1
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
..-.++-++++-+..||.|+||.|++..++.+|+..|+|.++.... .....+++.|.+...+-+..|+|+++|+..-.
T Consensus 57 ~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~ 134 (361)
T KOG1006|consen 57 HLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFS 134 (361)
T ss_pred cccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhc
Confidence 3445566777778899999999999999999999999999976554 34567888999988887789999999999888
Q ss_pred CCeEEEEEecCCCCcHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH-------TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~-------~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~vK 908 (908)
++..||.||+| ..+|..+.. ..++|..+-.+.-..+.||.||.. ..||||||||+|||+|..|.+|
T Consensus 135 EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vK 208 (361)
T KOG1006|consen 135 EGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVK 208 (361)
T ss_pred CCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEe
Confidence 89999999999 456655443 579999999999999999999986 5899999999999999999886
No 388
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.65 E-value=5.6e-16 Score=167.77 Aligned_cols=135 Identities=15% Similarity=0.173 Sum_probs=119.6
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||.|++|.||++.+..+++.+++|.+..... .......+..|+.+++.++ ||+|+++++.+.+....|++||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~-~~~i~~~~~~~~~~~~~~~v~e 78 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELN-HPNIIKLLDVFRHKGDLYLVFE 78 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhc-CCCcchHHHhhccCCCEEEEEe
Confidence 5678899999999999999998999999998865442 2234567888999999996 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+++ +|.+++. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+|
T Consensus 79 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~ 138 (283)
T cd05118 79 FMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLK 138 (283)
T ss_pred ccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEE
Confidence 9975 8888886 4789999999999999999999999999999999999999888764
No 389
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.65 E-value=5e-16 Score=168.10 Aligned_cols=135 Identities=16% Similarity=0.206 Sum_probs=120.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|++.+.||+|+||.||++.+..+++.+|+|++.... ........+..|+.+++.++ |++++++++.+.+....|++||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~~~~~~~v~e 78 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELK-HPNIVKLLDVIHTERKLYLVFE 78 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcC-CCCHHHHHhhhhcCCceEEEec
Confidence 677889999999999999999999999999987654 22334567788999999995 9999999999999999999999
Q ss_pred cCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 851 TYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|++ ++|.+++. ..+++..+..++.|++.||.|||++||+||||+|+||+++++|.+|
T Consensus 79 ~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~ 138 (282)
T cd07829 79 YCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLK 138 (282)
T ss_pred CcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEE
Confidence 997 58999997 3799999999999999999999999999999999999999988764
No 390
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.65 E-value=5.9e-16 Score=156.99 Aligned_cols=129 Identities=16% Similarity=0.126 Sum_probs=98.1
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccc-----------------------hHHHHHHHHHHHHhcCCCC
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG-----------------------KEVQVLKEKNLMKSVSPSA 830 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~-----------------------~~~~~~~E~~il~~l~~~~ 830 (908)
.+.||+|+||.||+|.+. +|+.||+|+++........ .......|...+.++. ++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~ 79 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLY-EA 79 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHH-hC
Confidence 468999999999999987 8999999998765311000 0123457888898885 67
Q ss_pred ccceeeeeeccCCeEEEEEecCCCCcHHH-HHc-CCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCcc
Q 002560 831 CVPQILCTCADSMHAGLLLNTYLACPLAS-ILH-TPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 831 ~i~~~~~~~~~~~~~~iv~e~~~gg~L~~-~l~-~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~v 907 (908)
++......... ..||||||++|+++.. .+. ..++...+..++.|++.++.+||+ +||+||||||+|||++ +|.+
T Consensus 80 ~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~ 156 (190)
T cd05145 80 GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP 156 (190)
T ss_pred CCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence 66333322222 2489999999885543 344 678889999999999999999999 9999999999999998 6654
No 391
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.65 E-value=1.8e-16 Score=172.62 Aligned_cols=143 Identities=10% Similarity=0.176 Sum_probs=123.7
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.+.++.-+.+.+.++||+|-||.|.+|... .+..+|+|+++..... +....+.+|+++|.+| +||||+++++.|..
T Consensus 531 al~EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~--~~r~~F~kEIkiLsqL-khPNIveLvGVC~~ 606 (807)
T KOG1094|consen 531 ALVEFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATK--NARNDFLKEIKILSRL-KHPNIVELLGVCVQ 606 (807)
T ss_pred chhhcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccch--hHHHHHHHHHHHHhcc-CCCCeeEEEeeeec
Confidence 344566677899999999999999999864 3689999998765533 3457899999999999 49999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILHT----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~~----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
++.++++|||++.|+|.+++.. .........++.||+.|+.||.+.+++||||.|.|+|+|.++++|
T Consensus 607 DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iK 677 (807)
T KOG1094|consen 607 DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIK 677 (807)
T ss_pred CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEE
Confidence 9999999999999999999972 224445566999999999999999999999999999999999886
No 392
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.65 E-value=7.5e-16 Score=165.95 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=113.4
Q ss_pred eEEEEEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC----
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM---- 843 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~---- 843 (908)
|++.+.||+|+||.||++.... ++..+|+|++.... ......+.+.+|+.+++.+. ||+|+++++.+....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~~ 78 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFD-HPNVIKLIGVSLRSRAKGR 78 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCC-CCCcceEEEEEccCCCCCc
Confidence 5678899999999999998643 57899999986543 22334567889999999995 999999999775432
Q ss_pred --eEEEEEecCCCCcHHHHHc--------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 --HAGLLLNTYLACPLASILH--------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 --~~~iv~e~~~gg~L~~~l~--------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+++++|+.+++|..++. ..++...+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~k 153 (273)
T cd05074 79 LPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVC 153 (273)
T ss_pred ccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEE
Confidence 3478899999999988764 1478899999999999999999999999999999999999888764
No 393
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.65 E-value=1.1e-15 Score=170.66 Aligned_cols=137 Identities=16% Similarity=0.219 Sum_probs=117.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC------
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS------ 842 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~------ 842 (908)
++|.+.+.||+|+||.||++.+..+++.+|+|.+.+... .......+.+|+.+++.+. ||||+++++++...
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQ-HENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcC-CCCccchhheecccccCCCC
Confidence 579999999999999999999999999999998865432 2223456789999999995 99999999887654
Q ss_pred CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|++|||+. .+|..++...+++..+..++.|++.||.|||++||+||||||+|||++.+|.+|
T Consensus 93 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred ceEEEEecccc-cCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEE
Confidence 34699999995 478777766799999999999999999999999999999999999999988764
No 394
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.64 E-value=2e-16 Score=171.37 Aligned_cols=131 Identities=11% Similarity=0.172 Sum_probs=114.5
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+.++...-++.||.|+.|.||+++. .++.||||.++.-. ..+++.|++|+ ||||+.|.++|.....
T Consensus 120 eiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~elk----------ETdIKHLRkLk-H~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 120 EIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRELK----------ETDIKHLRKLK-HPNIITFKGVCTQSPC 186 (904)
T ss_pred cCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhhhh----------hhhHHHHHhcc-CcceeeEeeeecCCce
Confidence 34555555577899999999999987 46899999764221 24677899995 9999999999999999
Q ss_pred EEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+|||||||..|.|..+|+ ..+.......|..+|+.|++|||.+.|||||||.-||||..+..||
T Consensus 187 yCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VK 252 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVK 252 (904)
T ss_pred eEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEE
Confidence 999999999999999998 7789999999999999999999999999999999999999877665
No 395
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.64 E-value=7.8e-16 Score=165.44 Aligned_cols=127 Identities=17% Similarity=0.121 Sum_probs=109.9
Q ss_pred EecCCCeEEEEEEEECCCC------ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 776 CLYSTDCSEIGLVLLRDSE------NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~------~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
.||+|+||.||+++++... ..+|+|.+.+... ......+.+|..+++.+. ||+|+++++++.+....|++|
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT--DQEKKEFLKEAHLMSNFN-HPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc--hhhHHHHHHHHHHHHhcC-CCCeeeEeeeecCCCCeEEEE
Confidence 5899999999999886543 6899998754321 223557888999999995 999999999999999999999
Q ss_pred ecCCCCcHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 850 NTYLACPLASILH---------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 850 e~~~gg~L~~~l~---------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||+++++|.+++. ..+++..+..++.|++.||.|||+++++|+||||+|||++.++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~ 143 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKG 143 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCC
Confidence 9999999999986 1367889999999999999999999999999999999999866
No 396
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.63 E-value=1.1e-16 Score=168.28 Aligned_cols=146 Identities=16% Similarity=0.113 Sum_probs=123.0
Q ss_pred cccccccccc-cc-cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh----ccchHHHHHHHHHHHHhcCCCC
Q 002560 757 SIDISSLAKV-SL-TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK----CLGKEVQVLKEKNLMKSVSPSA 830 (908)
Q Consensus 757 ~~~~~~~~~~-~~-~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~----~~~~~~~~~~E~~il~~l~~~~ 830 (908)
..+.+.|.+- .+ +.|-++.+||+|+|+.||++.+....+++|+|+-...... +.+...+..+|.+|.+.|. ||
T Consensus 449 NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLD-Hp 527 (775)
T KOG1151|consen 449 NEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELD-HP 527 (775)
T ss_pred ccchhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccC-cc
Confidence 3444555442 23 4588899999999999999999999999999986443322 2445678899999999994 99
Q ss_pred ccceeeeeec-cCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhC--CcEecCCCCCcEEEcC
Q 002560 831 CVPQILCTCA-DSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKR--GVLYRGVSPDVLMLDK 903 (908)
Q Consensus 831 ~i~~~~~~~~-~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~--gIiHrDIKp~NILi~~ 903 (908)
.|+++|++|. +.+.+|-|+|||+|.+|.-+|+ +.+++.+++.|+.||+.||.||.+. -|||-||||.|||+-.
T Consensus 528 RIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~ 605 (775)
T KOG1151|consen 528 RIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN 605 (775)
T ss_pred eeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence 9999999985 6677899999999999999998 7799999999999999999999986 4999999999999964
No 397
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.63 E-value=4.4e-16 Score=178.72 Aligned_cols=143 Identities=12% Similarity=0.177 Sum_probs=126.0
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECC-----CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRD-----SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~-----~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
...++..+.++.+.||+|.||+||+++... ....||||.++... +......|.+|++++..++ |||||++++
T Consensus 480 ~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a--~~~~~~dF~REaeLla~l~-H~nIVrLlG 556 (774)
T KOG1026|consen 480 VLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA--ENQARQDFRREAELLAELQ-HPNIVRLLG 556 (774)
T ss_pred eeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc--cHHHHHHHHHHHHHHHhcc-CCCeEEEEE
Confidence 446778899999999999999999997643 34589999987654 3336778999999999995 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHc------------CC----CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 838 TCADSMHAGLLLNTYLACPLASILH------------TP----LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~------------~~----l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.+..++.+|||+|||..|||.++|+ .. ++..+...++.||+.|++||-++.++||||-..|+||
T Consensus 557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV 636 (774)
T ss_pred EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee
Confidence 9999999999999999999999996 12 7788899999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
.++-.||
T Consensus 637 ge~l~VK 643 (774)
T KOG1026|consen 637 GENLVVK 643 (774)
T ss_pred ccceEEE
Confidence 9887765
No 398
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.63 E-value=1e-15 Score=156.68 Aligned_cols=131 Identities=14% Similarity=0.223 Sum_probs=118.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
-+|++.++||+|+||.++++.+.-++++||||.-+... ...++..|.+.++.|.+.+.|+..|.+.+...+-.||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-----~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-----EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC-----CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 47999999999999999999999999999999754332 3457888999999998899999999999999999999
Q ss_pred EecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 849 LNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 849 ~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||++ |-+|.+++. ..|+..++..++.|++.-++|+|++.+|+|||||+|+||..-|
T Consensus 103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~ 161 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPG 161 (449)
T ss_pred hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCC
Confidence 9988 778877776 8899999999999999999999999999999999999998655
No 399
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.63 E-value=7.1e-16 Score=161.18 Aligned_cols=136 Identities=12% Similarity=0.110 Sum_probs=117.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC-CC----ccceeeeeecc
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP-SA----CVPQILCTCAD 841 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~-~~----~i~~~~~~~~~ 841 (908)
--+.|++++.||+|+||.|-.|.+..++..+|+|+++.-. ...+..+-|+++|+++.. .| .++.+.++|.-
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~----kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD----KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH----HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 3577999999999999999999999999999999986432 245567789999999832 22 36677788999
Q ss_pred CCeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 842 SMHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
.++.|||+|.+ |.+++++|. .+++...++.+++|++.++.|||+.+++|-||||||||+-+..+.
T Consensus 163 rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~ 231 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYF 231 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceE
Confidence 99999999988 779999997 579999999999999999999999999999999999999876543
No 400
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.63 E-value=6.9e-16 Score=167.60 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=116.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeec
Q 002560 761 SSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 761 ~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
..+-.++=..|++++.||+||.+.||+|...+.+ .||+|.+... ..+......+.+|+.+|.+|++|..|+++|++-.
T Consensus 353 ~~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~-iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 353 NEIIKVKGREYEILKQIGSGGSSKVFKVLNSDKQ-IYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred CeeEEECcchhhHHHhhcCCCcceeeeeecCCCc-chhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 3455566677999999999999999999876544 4555544332 2345567889999999999999999999999999
Q ss_pred cCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 841 DSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 841 ~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
.++++||||||= ..+|..+|+ ..++.-.+++|..||+.|+.++|.+||||.||||.|+|+-
T Consensus 431 ~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV 494 (677)
T KOG0596|consen 431 TDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV 494 (677)
T ss_pred cCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE
Confidence 999999999976 579999998 3344458999999999999999999999999999999985
No 401
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.62 E-value=2e-15 Score=161.45 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=114.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|..+++.++ ||||+++++.+.+....|+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~~i~~~~~~~~~~~~~~l 79 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD-HPAIVKFHASFLERDAFCI 79 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC-CCcHHHHHHHHhcCCceEE
Confidence 488999999999999999999887777777776543321 1223445677889999985 9999999999999999999
Q ss_pred EEecCCCCcHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 848 LLNTYLACPLASILH------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 848 v~e~~~gg~L~~~l~------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
+|||+++++|.+++. ..+++..+..++.|++.||.|||++|++|+||||+||+++.
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~ 141 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN 141 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec
Confidence 999999999998874 46899999999999999999999999999999999999975
No 402
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.62 E-value=5.8e-16 Score=172.28 Aligned_cols=135 Identities=21% Similarity=0.205 Sum_probs=118.7
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..++|++...+|.|+|+.|..|.+..+++.+++|++.+... ...+|..++....+|||+++++..+.+..+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-------~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-------DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccccc-------ccccccchhhhhcCCCcceeecceecCCceee
Confidence 46789999999999999999999999999999999987621 23356767777778999999999999999999
Q ss_pred EEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE-cCCCccC
Q 002560 847 LLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML-DKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi-~~~g~vK 908 (908)
+|||++.|+.|.+.+. .+.....+..|+++|+.|+.|||++|++||||||+|||+ ++.|++|
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lr 456 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLR 456 (612)
T ss_pred eeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEE
Confidence 9999999999888877 444448888999999999999999999999999999999 5888764
No 403
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.61 E-value=3.5e-14 Score=144.61 Aligned_cols=175 Identities=15% Similarity=0.120 Sum_probs=118.2
Q ss_pred CCCCcceEEEecCCCCCCCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhccCCC
Q 002560 111 DKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDD 190 (908)
Q Consensus 111 r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~ 190 (908)
....-|.|.+.. .+++..+++|+|||| +..+|.+++..+...+........ .+.+.+..+|+.+.... .
T Consensus 14 ~~~~GD~~~~~~---~~~~~~~~~v~Dg~G--~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~~~--~ 82 (193)
T smart00331 14 TQVGGDFYDVVK---LPEGRLLIAIADVMG--KGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYENG--E 82 (193)
T ss_pred HhcCccEEEEEE---eCCCeEEEEEEecCC--CChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHhcC--C
Confidence 456778887644 234578999999999 334444444444444433222111 24556667788887652 3
Q ss_pred CCCcceEEEEEE--ECCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCc
Q 002560 191 SMSGTTAVTVLV--RGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDV 268 (908)
Q Consensus 191 ~~~GtT~~~~~i--~~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~ 268 (908)
..+|+|++++++ ..++++++|+||+|+|+++.++.. ...+.+.
T Consensus 83 ~~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~---~~~~~~~-------------------------------- 127 (193)
T smart00331 83 DGMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGL---VEDLDDL-------------------------------- 127 (193)
T ss_pred CCcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCe---EEEcCCC--------------------------------
Confidence 347999999998 588999999999999999843321 1122221
Q ss_pred ccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCccccccChHHHHHHH
Q 002560 269 QCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMV 348 (908)
Q Consensus 269 ~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~ei~~~v 348 (908)
++.+|.. ...++++...++.++|. |+|+||||||.++.+++.+++
T Consensus 128 ----------------------------~~~lG~~------~~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~l~~~l 172 (193)
T smart00331 128 ----------------------------GAPLGLE------PDVEVDVRELTLEPGDL-LLLYTDGLTEARNPERLEELL 172 (193)
T ss_pred ----------------------------CceeeeC------CCCcceeEEEeeCCCCE-EEEECCCccccCChHHHHHHH
Confidence 2233322 12356778889999998 699999999999999999998
Q ss_pred hcc--CCHHHHHHHHHHHHH
Q 002560 349 AKY--KDPRDACAAIVAESY 366 (908)
Q Consensus 349 ~~~--~~~~~~a~~Lv~~a~ 366 (908)
.+. .++++.++.+.+++.
T Consensus 173 ~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 173 EELLGSPPAEIAQRILEELL 192 (193)
T ss_pred HHhcCCCHHHHHHHHHHHHh
Confidence 775 467777777776653
No 404
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.61 E-value=2.8e-15 Score=159.26 Aligned_cols=131 Identities=14% Similarity=0.157 Sum_probs=113.0
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc-CCCCccceeeeeeccC----C
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SPSACVPQILCTCADS----M 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~~i~~~~~~~~~~----~ 843 (908)
.+..+.+.||+|.||.||++.+ .|+.||||+++.. .+....+|.+|++.. -.|+||..|++.=..+ .
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 5688899999999999999988 5789999998654 356788899998874 2499999988654322 3
Q ss_pred eEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhC--------CcEecCCCCCcEEEcCCCcc
Q 002560 844 HAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKR--------GVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~--------gIiHrDIKp~NILi~~~g~v 907 (908)
.+|+|++|.+.|+|+++|. ..++......++..++.||.+||.. .|.|||||..|||+-++|.+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred EEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 5899999999999999999 8899999999999999999999953 49999999999999999865
No 405
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.61 E-value=6.3e-15 Score=160.79 Aligned_cols=141 Identities=10% Similarity=0.062 Sum_probs=102.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC---CceEEEeeechhhhhc--c------chHHHHHHHHHHHHhcCCCCccce
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS---ENFLSLKRFSKQKVKC--L------GKEVQVLKEKNLMKSVSPSACVPQ 834 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~---~~~~alK~~~~~~~~~--~------~~~~~~~~E~~il~~l~~~~~i~~ 834 (908)
+.-+.|++.+.||+|+||.||++.+..+ +..+|+|+........ . ........+...+..+ .|+++++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~-~h~~i~~ 87 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNI-DHLGIPK 87 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccC-CCCCCCc
Confidence 3446899999999999999999998877 6677887643221100 0 0001112233334455 4899999
Q ss_pred eeeeeccCC----eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 835 ILCTCADSM----HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 835 ~~~~~~~~~----~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+++...... ..|++|+++. .++.+.+. ...++..+..++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~ 166 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLV-ENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGY 166 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhc-cCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEE
Confidence 997654432 4578888874 46666665 4578889999999999999999999999999999999999887654
No 406
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=1.3e-16 Score=158.36 Aligned_cols=137 Identities=17% Similarity=0.187 Sum_probs=115.1
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCC-----
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSM----- 843 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~----- 843 (908)
.|.+--+.||.|+||.||.+.+..+|+.+|+|.+..-. .....-+++.+|..+|..++ |.|+...++..+..+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFk-HdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFR-HDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhc-cccHHHHHHhcCCCCchHHH
Confidence 34455578999999999999999999999999886432 23334578999999999995 999988887766543
Q ss_pred eEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 844 HAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 844 ~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+|+++|++. .+|..++- +.++...++-+..||+.||.|||+.+|+||||||.|+|++++-.+|
T Consensus 131 EiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLK 196 (449)
T KOG0664|consen 131 ELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILK 196 (449)
T ss_pred HHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEE
Confidence 4688999885 58888876 7899999999999999999999999999999999999999886654
No 407
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.60 E-value=5.1e-15 Score=176.26 Aligned_cols=143 Identities=18% Similarity=0.194 Sum_probs=126.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCc-----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN-----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~-----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
+..++....++.+.||+|.||.||.+....... .||+|.+.+.. +......|++|..+|+.++ ||||+++++
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~--~~~~~~~Fl~Ea~~m~~f~-HpNiv~liG 762 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS--SEQEVSDFLKEALLMSKFD-HPNIVSLIG 762 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC--CHHHHHHHHHHHHHHhcCC-CcceeeEEE
Confidence 556778889999999999999999998765433 48888876543 4556788999999999996 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHc---------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 838 TCADSMHAGLLLNTYLACPLASILH---------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~---------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.+-+....+|++|||+||+|..+|+ ..++......++.+|++|.+||+++++|||||-..|+||+....+|
T Consensus 763 v~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 763 VCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred eecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEE
Confidence 9999999999999999999999998 2488999999999999999999999999999999999999887665
No 408
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.59 E-value=3.4e-15 Score=159.81 Aligned_cols=134 Identities=15% Similarity=0.137 Sum_probs=116.0
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhc-CCCCccceeeeeeccC--
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSV-SPSACVPQILCTCADS-- 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~~i~~~~~~~~~~-- 842 (908)
..+...++.+.+|+|.||.||+++. +++.||||+++... .+.+.+|.+|+... -.|+||++++..-...
T Consensus 207 ~~l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~ 278 (534)
T KOG3653|consen 207 LELDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTA 278 (534)
T ss_pred ccCCchhhHHHhhcCccceeehhhc--cCceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCc
Confidence 3477888899999999999999988 45999999987543 56788999998875 3599999998765443
Q ss_pred --CeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh---------CCcEecCCCCCcEEEcCCCcc
Q 002560 843 --MHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHK---------RGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 843 --~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~---------~gIiHrDIKp~NILi~~~g~v 907 (908)
..+++|++|.+.|+|.++|. ..++......++..++.||.|||+ ..|+|||||..||||-+++.+
T Consensus 279 ~~~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTc 355 (534)
T KOG3653|consen 279 DRMEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTC 355 (534)
T ss_pred cccceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcE
Confidence 47899999999999999999 889999999999999999999996 359999999999999988764
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.59 E-value=2.8e-16 Score=173.79 Aligned_cols=138 Identities=14% Similarity=0.182 Sum_probs=126.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.-++|+.+..+|.|+||.||+++++.+++..|+|+++...-. ....+..|+-+++.++ ||||+.+++.|.....+|
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d---d~~~iqqei~~~~dc~-h~nivay~gsylr~dklw 88 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD---DFSGIQQEIGMLRDCR-HPNIVAYFGSYLRRDKLW 88 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc---cccccccceeeeecCC-CcChHHHHhhhhhhcCcE
Confidence 357899999999999999999999999999999998765432 3455678888888875 999999999999999999
Q ss_pred EEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+.||||.||+|.+..+ +++++..+.+..++.+.||.|||+.|=+|||||-.|||+++.|.+|
T Consensus 89 icMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvk 152 (829)
T KOG0576|consen 89 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVK 152 (829)
T ss_pred EEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCcee
Confidence 9999999999999888 8999999999999999999999999999999999999999999876
No 410
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.58 E-value=1.4e-15 Score=161.18 Aligned_cols=130 Identities=13% Similarity=0.230 Sum_probs=118.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECC---CCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRD---SENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~---~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
.+.|..+.+||+|+|+.||++.+.. ..+.+|+|.+.... ...++.+|+++|..+.++.||+.+.+.+..++.
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 5679999999999999999998877 67899999876544 345799999999999999999999999999999
Q ss_pred EEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 845 AGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
..+||||++..+..+++. .++...++.|++.++.||.++|.+|||||||||.|+|.+.
T Consensus 110 v~ivlp~~~H~~f~~l~~-~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~ 167 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYR-SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR 167 (418)
T ss_pred eEEEecccCccCHHHHHh-cCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc
Confidence 999999999998888875 6778999999999999999999999999999999999874
No 411
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.58 E-value=7.4e-15 Score=172.81 Aligned_cols=135 Identities=16% Similarity=0.200 Sum_probs=97.6
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeee---
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCT--- 838 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~--- 838 (908)
+..++|++.+.||+|+||.||++.+..+ +..+|+|.+..... .+....| .+ .... +.++..+...
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~-----~e~~~~e-~l-~~~~-~~~~~~~~~~~~~ 200 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA-----VEIWMNE-RV-RRAC-PNSCADFVYGFLE 200 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch-----hHHHHHH-HH-Hhhc-hhhHHHHHHhhhc
Confidence 4678999999999999999999999988 89999998754221 1111222 11 1111 2222222211
Q ss_pred ---eccCCeEEEEEecCCCCcHHHHHc-CCC---------------------CHHHHHHHHHHHHHHHHHHHhCCcEecC
Q 002560 839 ---CADSMHAGLLLNTYLACPLASILH-TPL---------------------DEQSARFCAASVVAALEDLHKRGVLYRG 893 (908)
Q Consensus 839 ---~~~~~~~~iv~e~~~gg~L~~~l~-~~l---------------------~~~~~~~~~~qi~~aL~~LH~~gIiHrD 893 (908)
.......|++|||+.+++|.+++. ..+ ....+..++.||+.||.|||++||+|||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD 280 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD 280 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence 245667999999999999999886 221 1234667999999999999999999999
Q ss_pred CCCCcEEEcC-CCccC
Q 002560 894 VSPDVLMLDK-SGHLQ 908 (908)
Q Consensus 894 IKp~NILi~~-~g~vK 908 (908)
|||+|||++. ++.+|
T Consensus 281 LKP~NILl~~~~~~~K 296 (566)
T PLN03225 281 VKPQNIIFSEGSGSFK 296 (566)
T ss_pred CCHHHEEEeCCCCcEE
Confidence 9999999985 46554
No 412
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.58 E-value=5.3e-15 Score=188.08 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=113.2
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
..|...+.||+|+||.||++++..++..||+|.+..... ....|+.++++++ ||||+++++++.+....|+|
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~-HpnIv~~~~~~~~~~~~~lv 761 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQ-HPNIVKLIGLCRSEKGAYLI 761 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCC-CCCcceEEEEEEcCCCCEEE
Confidence 456677889999999999999998999999998764321 1124577888984 99999999999999999999
Q ss_pred EecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCcEecCCCCCcEEEcCCCcc
Q 002560 849 LNTYLACPLASILHTPLDEQSARFCAASVVAALEDLH---KRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 849 ~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH---~~gIiHrDIKp~NILi~~~g~v 907 (908)
|||+++|+|.++++ .+++.....++.|++.||.||| +.+|+||||||+|||++.++..
T Consensus 762 ~Ey~~~g~L~~~l~-~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~ 822 (968)
T PLN00113 762 HEYIEGKNLSEVLR-NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822 (968)
T ss_pred EeCCCCCcHHHHHh-cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCce
Confidence 99999999999996 5888999999999999999999 6799999999999999987653
No 413
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.58 E-value=1.1e-14 Score=167.04 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=106.3
Q ss_pred cccccceEEEEEecCCCeEEEEEEEEC----------------CCCceEEEeeechhhhhc-----------cchHHHHH
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLR----------------DSENFLSLKRFSKQKVKC-----------LGKEVQVL 817 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~----------------~~~~~~alK~~~~~~~~~-----------~~~~~~~~ 817 (908)
+++.++|.+.++||+|+||.||++... ..++.+|||.+....... ....+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 346789999999999999999998642 234679999975432110 11122344
Q ss_pred HHHHHHHhcCCCCc----cceeeeeec--------cCCeEEEEEecCCCCcHHHHHcC----------------------
Q 002560 818 KEKNLMKSVSPSAC----VPQILCTCA--------DSMHAGLLLNTYLACPLASILHT---------------------- 863 (908)
Q Consensus 818 ~E~~il~~l~~~~~----i~~~~~~~~--------~~~~~~iv~e~~~gg~L~~~l~~---------------------- 863 (908)
.|..++.++.+++. +++++++|. .....|+||||+++++|.++++.
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 57777777754432 345555443 23568999999999999998861
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 864 ----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 864 ----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++...++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~k 349 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVK 349 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEE
Confidence 124567888999999999999999999999999999999888764
No 414
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.57 E-value=1.6e-14 Score=147.58 Aligned_cols=130 Identities=15% Similarity=0.092 Sum_probs=103.8
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHH------HHHHHHHHHhcCCCCccceeeeeec
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQ------VLKEKNLMKSVSPSACVPQILCTCA 840 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~------~~~E~~il~~l~~~~~i~~~~~~~~ 840 (908)
--.+|++.+.||.|+||.||++.. ++..+|+|++............. +.+|...+.++. ||+|+.+...+.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~-~~GI~~~~d~~~ 105 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR-SEGLASLNDFYL 105 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH-HCCCCcceEeee
Confidence 346799999999999999999755 46689999987654333333233 578888999995 999998887755
Q ss_pred cC--------CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 841 DS--------MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 841 ~~--------~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
+. ...+++|||++|.+|.++.. +++ ....+++.+|..||++|++|||+||+|||++.+|
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE--ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh--ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC
Confidence 33 35899999999999988743 333 2456999999999999999999999999999877
No 415
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.56 E-value=4.9e-15 Score=166.69 Aligned_cols=141 Identities=9% Similarity=0.079 Sum_probs=127.8
Q ss_pred cccccceEEEEEecCCCeEEEEEEEECCCCc---eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeecc
Q 002560 765 KVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN---FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCAD 841 (908)
Q Consensus 765 ~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~---~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~ 841 (908)
.++.+...|.++||.|.||.|+.++.+..++ .||||.++... ..++...|+.|..||-++. ||||+++-+....
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~EAsIMGQFd-HPNIIrLEGVVTk 701 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSEASIMGQFD-HPNIIRLEGVVTK 701 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhhhhhcccCC-CCcEEEEEEEEec
Confidence 4677889999999999999999999887664 89999987544 3456788999999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...+.||+|||++|+|..+|+ +.|+..+...+.+.|+.|++||-+.|++||||-..|||++.+-.+|
T Consensus 702 s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCK 771 (996)
T KOG0196|consen 702 SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCK 771 (996)
T ss_pred CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEE
Confidence 999999999999999999998 7799999999999999999999999999999999999999987665
No 416
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=99.56 E-value=5.6e-15 Score=167.04 Aligned_cols=209 Identities=21% Similarity=0.287 Sum_probs=168.2
Q ss_pred cCCCEEEcCCCcCCeEEEEEEeEEEEEEeccc--cCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEEEE
Q 002560 502 QAGDIVVKQGGEGDCFYVVGSGEFEVMATQEE--KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLWAL 579 (908)
Q Consensus 502 ~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~--g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i 579 (908)
+..++|.++|+...++|+|.+|.+.++....+ ++.... -...+..+||+++|-++++.+.|...+++|.++|.+..|
T Consensus 392 keitiiv~q~a~~~gl~~ii~g~l~v~~sm~~~s~~~~~~-~~~~f~v~pG~ivgyla~lt~e~S~~tirArsdt~v~~i 470 (1158)
T KOG2968|consen 392 KEITIIVEQGARDVGLYYIIKGSLSVYQSMYDVSGNLVLA-GMLLFVVGPGEIVGYLAILTNEPSFITIRARSDTRVLFI 470 (1158)
T ss_pred cceEEEEecccccceeeEEeecceeeeehhcccccccccc-cceEEEecCCceechhhhhcCCcceEEEEEecceEEEEe
Confidence 44555799999999999999999988865432 211111 123455699999999999999999999999999999999
Q ss_pred eHHHHHHHHhhhhhhH--HHHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcc
Q 002560 580 KREDFRGILMSEFSNL--SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDA 657 (908)
Q Consensus 580 ~~~~f~~ll~~~~~~~--~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~ 657 (908)
++.+|.+++.+.|..- ..-..++ .++ .-+.++-.++.+..+.+|+.+++|||.+|.+|+|.+|.++-....
T Consensus 471 srs~l~~~~~~~p~I~L~ia~svl~------~ls-p~lr~~D~AldWv~l~~g~alyrqgD~Sd~iyvVl~GRlRsv~~~ 543 (1158)
T KOG2968|consen 471 SRSDLERFLDAEPLIYLRIAHSVLR------RLS-PFLRKLDFALDWVRLEPGQALYRQGDSSDSIYVVLNGRLRSVIRQ 543 (1158)
T ss_pred eHHHHHHHHHhCceEEEehhhHHHH------hcC-HHHhhhhhhcceEEeccccHHHhcCCccCcEEEEecCeehhhhhc
Confidence 9999999999988421 1111222 222 234567788999999999999999999999999999999865433
Q ss_pred cccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccccc
Q 002560 658 DLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
. .++...+.++++||.+|+.+.+++++|..||.|+.++++.+|+..-|+-+.-.+|++.
T Consensus 544 ~---------------------~~k~~i~~EygrGd~iG~~E~lt~~~R~tTv~AvRdSelariPe~l~~~ik~ryP~v~ 602 (1158)
T KOG2968|consen 544 S---------------------GGKKEIVGEYGRGDLIGEVEMLTKQPRATTVMAVRDSELARIPEGLLNFIKLRYPQVV 602 (1158)
T ss_pred c---------------------CccchhhhhccCcceeehhHHhhcCCccceEEEEeehhhhhccHHHHHHHHHhccHHH
Confidence 2 2345689999999999999999999999999999999999999999988887777765
Q ss_pred cc
Q 002560 738 HD 739 (908)
Q Consensus 738 ~~ 739 (908)
.+
T Consensus 603 ~r 604 (1158)
T KOG2968|consen 603 TR 604 (1158)
T ss_pred HH
Confidence 53
No 417
>smart00090 RIO RIO-like kinase.
Probab=99.56 E-value=1.3e-14 Score=151.70 Aligned_cols=133 Identities=12% Similarity=0.092 Sum_probs=101.9
Q ss_pred ceEEEEEecCCCeEEEEEEE-ECCCCceEEEeeechhhhhcc---------------------chHHHHHHHHHHHHhcC
Q 002560 770 DMEWRKCLYSTDCSEIGLVL-LRDSENFLSLKRFSKQKVKCL---------------------GKEVQVLKEKNLMKSVS 827 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~-~~~~~~~~alK~~~~~~~~~~---------------------~~~~~~~~E~~il~~l~ 827 (908)
.|.+.+.||+|+||.||+|. +..+++.+|+|++........ .....+..|..++..+.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999998 677899999999875431100 01123568999999985
Q ss_pred C-CCccceeeeeeccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC-cEecCCCCCcEEEcC
Q 002560 828 P-SACVPQILCTCADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRG-VLYRGVSPDVLMLDK 903 (908)
Q Consensus 828 ~-~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~g-IiHrDIKp~NILi~~ 903 (908)
+ ...+++++.. ...|+||||+.|.+|...+. ..+....+..++.|++.+|.+||++| |+||||||+|||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~- 183 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH- 183 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence 2 2334455542 23489999999988876553 55666678899999999999999999 99999999999998
Q ss_pred CCcc
Q 002560 904 SGHL 907 (908)
Q Consensus 904 ~g~v 907 (908)
++.+
T Consensus 184 ~~~i 187 (237)
T smart00090 184 DGKV 187 (237)
T ss_pred CCCE
Confidence 5544
No 418
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.55 E-value=6.5e-15 Score=160.86 Aligned_cols=137 Identities=15% Similarity=0.204 Sum_probs=122.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
.-.+.....+||-|.||.||.+.+++..-.+|+|.++.+.+ ..+.|+.|..+|+.+ +|||+++++++|.-+..+|
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeE
Confidence 34567778899999999999999999999999998865443 467899999999999 5999999999999999999
Q ss_pred EEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||+|||..|+|.++|+ ..++.-....++.||..|++||..+++|||||-..|+|+.++..+|
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVK 405 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVK 405 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEE
Confidence 9999999999999998 4567777788899999999999999999999999999999887665
No 419
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.55 E-value=5.3e-14 Score=146.39 Aligned_cols=134 Identities=22% Similarity=0.318 Sum_probs=120.0
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|...+..++ |++++++++.+......|+++|
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~-~~~i~~~~~~~~~~~~~~~v~e 77 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLK-HPNIVKLYGVFEDPEPLYLVME 77 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCC-CCChhhheeeeecCCceEEEEe
Confidence 56789999999999999999988999999998765432 24567888999999995 9999999999998899999999
Q ss_pred cCCCCcHHHHHc--CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILH--TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~--~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
++++++|.+++. .. +++..+..++.+++.++.+||+++++|+||+|.||+++.++.+
T Consensus 78 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~ 137 (225)
T smart00221 78 YCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLV 137 (225)
T ss_pred ccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCE
Confidence 999999999997 34 8999999999999999999999999999999999999987765
No 420
>KOG1113 consensus cAMP-dependent protein kinase types I and II, regulatory subunit [Signal transduction mechanisms]
Probab=99.54 E-value=2.8e-14 Score=147.57 Aligned_cols=139 Identities=21% Similarity=0.219 Sum_probs=115.5
Q ss_pred CceeEEEEccceEEEEEeHHHHHHHHh-hhhh-hHHHHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCC
Q 002560 563 PLQASVRAVTNGMLWALKREDFRGILM-SEFS-NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGV 640 (908)
Q Consensus 563 ~r~~tv~A~~~~~l~~i~~~~f~~ll~-~~~~-~~~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~ 640 (908)
.|..+|.|.+-+.-. +.|...+. +... .+....+++++-+|.+|+++++.++.+++..+.+++|+.|+.||+.+
T Consensus 88 ~RRssV~aE~~tp~~----d~~~~~~~pKd~e~~~~L~~a~r~~~LF~~Ld~eq~~~v~dam~~~~v~~G~~Vi~qGdeG 163 (368)
T KOG1113|consen 88 VRRSSVSAEEITPDD----DEFKRKYIPKDDETRRRLEEAFRKNLLFANLDDEQLSQVLDAMFEKRVKAGETVIKQGDEG 163 (368)
T ss_pred cccceeeeeecCccc----hhhhhcCCCCCHHHHHHHHHHHHhccccccCCHHHHHHHHHhhceeeecCCcEEEecCCcC
Confidence 444555554432222 44444443 2233 33455789999999999999999999999999999999999999999
Q ss_pred CeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEE
Q 002560 641 AALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAI 720 (908)
Q Consensus 641 d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~ 720 (908)
|+||||-+|++.|++... .+..+++|.+|||+||+.+.||.+||+|.+++.++.
T Consensus 164 d~fYvI~kGt~dVyv~~~--------------------------~v~~~~~g~sFGElALmyn~PRaATv~a~t~~klWg 217 (368)
T KOG1113|consen 164 DNFYVIDKGTFDVYVNGT--------------------------YVTTYSPGGSFGELALMYNPPRAATVVAKSLKKLWG 217 (368)
T ss_pred CcEEEEecceEEEEECCe--------------------------EEeeeCCCCchhhhHhhhCCCcccceeeccccceEE
Confidence 999999999999998765 688999999999999999999999999999999999
Q ss_pred ecccccccccC
Q 002560 721 LTKEKFDLVVG 731 (908)
Q Consensus 721 i~~~~f~~llg 731 (908)
|++..|.+++-
T Consensus 218 ldr~SFrrIi~ 228 (368)
T KOG1113|consen 218 LDRTSFRRIIM 228 (368)
T ss_pred EeeceeEEEee
Confidence 99999977653
No 421
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.54 E-value=8.7e-14 Score=142.50 Aligned_cols=128 Identities=19% Similarity=0.303 Sum_probs=114.4
Q ss_pred ecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCc
Q 002560 777 LYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACP 856 (908)
Q Consensus 777 LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~ 856 (908)
||+|.+|.||++....+++.+++|++....... ....+.+|+..++.+. |+++++++..+......+++||++.+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~-~~~i~~~~~~~~~~~~~~~~~e~~~~~~ 77 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLN-HPNIVKLYGVFEDENHLYLVMEYCEGGS 77 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcC-CCCeeeEeeeeecCCeEEEEEecCCCCc
Confidence 689999999999998889999999987554221 3467889999999996 7999999999999899999999999999
Q ss_pred HHHHHc-C--CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC-CCcc
Q 002560 857 LASILH-T--PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK-SGHL 907 (908)
Q Consensus 857 L~~~l~-~--~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~-~g~v 907 (908)
|.+++. . .++...+..++.+++.++.+||++|++|+||+|.||+++. ++.+
T Consensus 78 l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~ 132 (215)
T cd00180 78 LKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKV 132 (215)
T ss_pred HHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcE
Confidence 999997 3 6899999999999999999999999999999999999998 5654
No 422
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.53 E-value=6.1e-14 Score=140.06 Aligned_cols=126 Identities=14% Similarity=0.038 Sum_probs=97.6
Q ss_pred EEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccc-hHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLG-KEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~-~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
.+...|++|+||+|+++.. .+..++.+.+......... ....+.+|+.+|++|.+++++++++++ +..|++|+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3567899999999998765 5667776666544332111 122478999999999878999999885 45799999
Q ss_pred cCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCC-CCCcEEEcCCCccC
Q 002560 851 TYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGV-SPDVLMLDKSGHLQ 908 (908)
Q Consensus 851 ~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDI-Kp~NILi~~~g~vK 908 (908)
|+.|.+|.+.+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++
T Consensus 79 yI~G~~L~~~~~~----~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~ 132 (218)
T PRK12274 79 YLAGAAMYQRPPR----G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPA 132 (218)
T ss_pred eecCccHHhhhhh----h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEE
Confidence 9999999765421 1 2357889999999999999999999 79999999888753
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.53 E-value=5.8e-14 Score=154.84 Aligned_cols=132 Identities=16% Similarity=0.179 Sum_probs=112.4
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCC-ceEEEeeechhhhhccchHHHHHHHHHHHHhcC---CCCccceeeeee-ccCCe
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSE-NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS---PSACVPQILCTC-ADSMH 844 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~-~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~---~~~~i~~~~~~~-~~~~~ 844 (908)
.|++.+.||+|+||.||+|.+..++ ..+|+|+........ ...+..|..++..+. +.++++.++... ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999988774 689999876543211 115667888888875 346899999988 58889
Q ss_pred EEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 845 AGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
-||||+.+ |.+|.++.. +.++..++..++.|++.+|++||+.|++||||||+|+++...+
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~ 159 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS 159 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC
Confidence 99999988 899999885 6799999999999999999999999999999999999998653
No 424
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=99.52 E-value=1.7e-13 Score=144.30 Aligned_cols=120 Identities=18% Similarity=0.250 Sum_probs=108.7
Q ss_pred HHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCC
Q 002560 472 ERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLS 551 (908)
Q Consensus 472 ~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~ 551 (908)
.++|+.+++|..|++++++.|...+..+.|++|++|+++|+.++.+|+|++|.++++... +|++.+.. .+++|+
T Consensus 6 ~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~-~~~~~~i~-----~~~~g~ 79 (236)
T PRK09392 6 LIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASS-QDRETTLA-----ILRPVS 79 (236)
T ss_pred HHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcC-CCceEEEE-----EeCCCc
Confidence 458899999999999999999999999999999999999999999999999999999875 45454433 348899
Q ss_pred cchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHH
Q 002560 552 SFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 552 ~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~ 597 (908)
+||+.+++.+.++.++++|.++|+++.|+++.|.+++.++|.....
T Consensus 80 ~~g~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~~ 125 (236)
T PRK09392 80 TFILAAVVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMRA 125 (236)
T ss_pred hhhhHHHhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHHH
Confidence 9999999999999999999999999999999999999999986643
No 425
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.48 E-value=7.6e-14 Score=153.15 Aligned_cols=134 Identities=10% Similarity=0.191 Sum_probs=113.1
Q ss_pred eEEEEEecCCCeEEEEEEEECCC--C--ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDS--E--NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAG 846 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~--~--~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~ 846 (908)
..+.+.||.|-||.||.+..... | --||+|.-+++.. ....+.|+.|..+|+.+. ||||+++++.+.+ ...|
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t--~d~tekflqEa~iMrnfd-HphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT--PDDTEKFLQEASIMRNFD-HPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC--hhhHHHHHHHHHHHHhCC-Ccchhheeeeeec-ccee
Confidence 33446899999999999976432 3 3688887665432 334678999999999995 9999999999865 4799
Q ss_pred EEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 847 LLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 847 iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||+++-|.|..+|+ ..++......|+.||+.||.|||++.++||||-..|||+.+..-+|
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVK 531 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVK 531 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceee
Confidence 9999999999999998 5789999999999999999999999999999999999998765443
No 426
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.48 E-value=9.7e-14 Score=149.55 Aligned_cols=144 Identities=19% Similarity=0.207 Sum_probs=121.8
Q ss_pred ccccccccccc-----cceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC----
Q 002560 758 IDISSLAKVSL-----TDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP---- 828 (908)
Q Consensus 758 ~~~~~~~~~~~-----~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~---- 828 (908)
+++..+..+.+ ..|.+....|+|-||.|..|.+...+..||||++....+. ...=+.|+.||++|+.
T Consensus 416 dDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~E 491 (752)
T KOG0670|consen 416 DDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPE 491 (752)
T ss_pred ccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCch
Confidence 34444544444 4599999999999999999999999999999999876643 3345689999999942
Q ss_pred -CCccceeeeeeccCCeEEEEEecCCCCcHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 829 -SACVPQILCTCADSMHAGLLLNTYLACPLASILH-----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 829 -~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~-----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
--++++++..|...+++|||+|.+ ..+|.++|. -.+....++.|+.|+..||..|...||+|.||||+|||++
T Consensus 492 dk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN 570 (752)
T KOG0670|consen 492 DKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN 570 (752)
T ss_pred hhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec
Confidence 236789999999999999999988 679999997 2588899999999999999999999999999999999999
Q ss_pred CCCc
Q 002560 903 KSGH 906 (908)
Q Consensus 903 ~~g~ 906 (908)
+..+
T Consensus 571 E~k~ 574 (752)
T KOG0670|consen 571 ESKN 574 (752)
T ss_pred cCcc
Confidence 7644
No 427
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=3.6e-14 Score=152.47 Aligned_cols=151 Identities=22% Similarity=0.321 Sum_probs=131.2
Q ss_pred HHHHHHHHhhccCCcccccCcccccC-----CHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCC
Q 002560 438 RARLRAIENSLENGQIWVPSSSAHRK-----TWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGG 512 (908)
Q Consensus 438 ~~~r~~~~~~~~~~~~~~~~~~~~~k-----~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd 512 (908)
...|.|+..++.+...|.++|.+|.- ..+..+...++|+..|+|.+|+++.+.++++.++...|.+|++|+++|+
T Consensus 232 nctRtAsV~alt~~~lWaidR~vFq~IM~~tg~~r~~~~~~fLrsv~~~q~l~Ee~L~KiaD~le~~~Yd~g~yIirqge 311 (732)
T KOG0614|consen 232 NCTRTASVRALTDVRLWAIDREVFQAIMMRTGLERHEQYMNFLRSVPLFQNLPEELLLKIADVLEEEYYDAGEYIIRQGE 311 (732)
T ss_pred CCcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHhhcCCceEEeecC
Confidence 34567777788889999999988754 4566788899999999999999999999999999999999999999999
Q ss_pred cCCeEEEEEEeEEEEEEeccc-cCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccc-eEEEEEeHHHHHHHHhh
Q 002560 513 EGDCFYVVGSGEFEVMATQEE-KNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTN-GMLWALKREDFRGILMS 590 (908)
Q Consensus 513 ~~~~~yiI~~G~v~v~~~~~~-g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~-~~l~~i~~~~f~~ll~~ 590 (908)
.++.||+|-+|.|.|...++. +.+..+. +++.||+|||-+|+....|+|++.|..+ ++++.|+++.|.+++..
T Consensus 312 ~G~~ffii~~G~V~vtq~~e~~~q~~~lr-----~l~kGd~FGE~al~~edvRtAniia~~~gv~cl~lDresF~~liG~ 386 (732)
T KOG0614|consen 312 KGDTFFIISKGTVKVTQQDEGSTQPQELR-----TLNKGDYFGERALLGEDVRTANIIAQAPGVECLTLDRESFKKLIGD 386 (732)
T ss_pred CCCeEEEEecceEEEeecCCCCCchhHHh-----hccccchhhHHHhhccCccchhhhccCCCceEEEecHHHHHHhccc
Confidence 999999999999999987764 3333333 3478999999999999999999999998 99999999999999876
Q ss_pred hhh
Q 002560 591 EFS 593 (908)
Q Consensus 591 ~~~ 593 (908)
..+
T Consensus 387 l~~ 389 (732)
T KOG0614|consen 387 LEE 389 (732)
T ss_pred HHH
Confidence 543
No 428
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.47 E-value=3.3e-14 Score=157.88 Aligned_cols=139 Identities=12% Similarity=0.096 Sum_probs=120.1
Q ss_pred ccccceEEEEEecCCCeEEEEEEEECCC-Cc--eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 766 VSLTDMEWRKCLYSTDCSEIGLVLLRDS-EN--FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 766 ~~~~~~~~~~~LG~G~~g~V~~~~~~~~-~~--~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
|..++..+.++||+|.||.|+.+.+... |+ .||||++....... ....|++|..+|.+|. |++++++|+...+
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~-H~hliRLyGvVl~- 182 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQ-HPHLIRLYGVVLD- 182 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhcc-CcceeEEeeeecc-
Confidence 4566777889999999999999988653 33 78999987654332 5678999999999995 9999999999887
Q ss_pred CeEEEEEecCCCCcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
..+.||||+++.|+|.+.|+ ..|.......|+.||+.|+.||.++++|||||-..|+|+-..-.||
T Consensus 183 qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVK 252 (1039)
T KOG0199|consen 183 QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVK 252 (1039)
T ss_pred chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceee
Confidence 67889999999999999997 5688899999999999999999999999999999999997765554
No 429
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.46 E-value=5.2e-14 Score=144.05 Aligned_cols=137 Identities=15% Similarity=0.217 Sum_probs=118.1
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC-----
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS----- 842 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~----- 842 (908)
...|.-++.+|.|.- .|..+.+.-+++.+|+|.+... .......++..+|..++..+. |+|+++++.+|...
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~-~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVN-HKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhc-ccceeeeeeccCccccHHH
Confidence 456888889999988 7778888889999999988765 333455678889999999995 99999999988654
Q ss_pred -CeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 -MHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 -~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
...|+|||++ ..+|.+.+.-.++...+.++..|++.|++|||+.||+||||||+||++..++.+|
T Consensus 93 ~~e~y~v~e~m-~~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lK 158 (369)
T KOG0665|consen 93 FQEVYLVMELM-DANLCQVILMELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLK 158 (369)
T ss_pred HHhHHHHHHhh-hhHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhhee
Confidence 3579999999 5689988887789999999999999999999999999999999999999887765
No 430
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.46 E-value=3.2e-13 Score=139.67 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=99.5
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhh-----ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-----CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
+.||+|++|.||++.+ .+..+++|+....... .......+.+|..++..+. +++++....++.+....+++|
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~ 78 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRAR-KAGVNVPAVYFVDPENFIIVM 78 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCeEEEEeCCCCEEEE
Confidence 5799999999999987 6678899975432211 1112346788999999985 777766555566677889999
Q ss_pred ecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 850 NTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 850 e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
||++|++|.+++....+ ....++.+++.+|.+||++|++|||++|.|||++ ++.
T Consensus 79 e~~~G~~L~~~~~~~~~--~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~ 132 (211)
T PRK14879 79 EYIEGEPLKDLINSNGM--EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGK 132 (211)
T ss_pred EEeCCcCHHHHHHhccH--HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCC
Confidence 99999999999873222 7788999999999999999999999999999998 443
No 431
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.45 E-value=4.3e-13 Score=141.01 Aligned_cols=125 Identities=24% Similarity=0.417 Sum_probs=111.2
Q ss_pred CeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCCCCcHHHH
Q 002560 781 DCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYLACPLASI 860 (908)
Q Consensus 781 ~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~ 860 (908)
+||.||++.+..+++.+++|++........ ...+.+|+..++.+ +|++++++++.+......+++|||+.+++|..+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 77 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDL 77 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHH
Confidence 589999999998899999999876543221 56888999999999 599999999999988999999999999999999
Q ss_pred Hc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 861 LH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 861 l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+. ..++...+..++.+++.++.|||+.||+|+||+|.||+++.++.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~ 127 (244)
T smart00220 78 LKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVK 127 (244)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEE
Confidence 87 3489999999999999999999999999999999999999887653
No 432
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.45 E-value=5.5e-12 Score=152.13 Aligned_cols=207 Identities=21% Similarity=0.196 Sum_probs=137.5
Q ss_pred eeCCCeeEEEEEEecccCCCCCCCCCCcceEEEecCCCCCCCcEEEEEecCCCcChHH---HHHHHHHHHHHHHHhcCCc
Q 002560 88 VPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQ---CSQFVKRKLCENLLRNNKF 164 (908)
Q Consensus 88 ~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~---as~~~~~~l~~~l~~~~~~ 164 (908)
.+..++.+.++++...- ..+..+.|.|.+.. .+++...++|+|||| +|.. +|..+.+.+.+.+....
T Consensus 545 ~e~~~~~~~~g~a~~~k----~g~~vsGD~y~~~~---l~~g~~~~~laDGmG-hG~~Aa~~S~~~~~ll~~~~~~g~-- 614 (764)
T TIGR02865 545 EETPKYHVSTGVARAAK----DGELVSGDSYSFGK---LSAGKYAVAISDGMG-SGPEAAQESSACVRLLEKFLESGF-- 614 (764)
T ss_pred ecCCceeehhhHHHhcC----CCCcccCceEEEEE---ECCCEEEEEEEcccC-CCHHHHHHHHHHHHHHHHHHHcCC--
Confidence 45556666665542221 24788999987754 234557899999999 3333 34444444433332221
Q ss_pred chhHHHHHHHHHHHHHHHHHhccCCCCCCcceEEEEEEE--CCEEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChh
Q 002560 165 HEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR--GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFRED 242 (908)
Q Consensus 165 ~~~~~~~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~--~~~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~ 242 (908)
+ ...++..+|+.+.... ...+++|+.+++++ .+++.++|+|+++.|+.|++. ...++..+-|
T Consensus 615 --~----~~~ai~~lN~~L~~~~--~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~----v~~i~s~~lP---- 678 (764)
T TIGR02865 615 --D----REVAIKTVNSILSLRS--TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAK----VEVIRSSNLP---- 678 (764)
T ss_pred --C----HHHHHHHHHHHHHhCC--CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCE----EEEecCCCce----
Confidence 1 2456677888776542 23468999999996 789999999999999987643 2333322111
Q ss_pred HHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCceeccCCCcCccccccccCccccccCCccccceEEEEEeC
Q 002560 243 ELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELT 322 (908)
Q Consensus 243 E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~ 322 (908)
+|-. -..+++....++.
T Consensus 679 ---------------------------------------------------------lGil------~~~~~~~~~~~L~ 695 (764)
T TIGR02865 679 ---------------------------------------------------------IGIL------DEVDVELVRKKLK 695 (764)
T ss_pred ---------------------------------------------------------eEec------cCCccceEEEEeC
Confidence 1100 1135677788999
Q ss_pred CCCCEEEEEcCccccccChHH-----HHHHHhc--cCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEc
Q 002560 323 NDHPFFVLASDGVFEFLSSQA-----VVDMVAK--YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386 (908)
Q Consensus 323 ~~d~flvlaSDGl~d~l~~~e-----i~~~v~~--~~~~~~~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~ 386 (908)
+||. |||+|||+||..++.+ +.+++.. ..+|++.++.|++++.+.. .+...||+|++++++
T Consensus 696 ~GD~-Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~--~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 696 NGDL-IVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELR--SGKIKDDMTVIVAKV 763 (764)
T ss_pred CCCE-EEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc--CCCCCCCeEEEEEEe
Confidence 9998 7999999999887543 6667754 3589999999999998652 123489999999986
No 433
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=99.44 E-value=1.1e-12 Score=120.54 Aligned_cols=112 Identities=35% Similarity=0.516 Sum_probs=102.4
Q ss_pred cccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhh
Q 002560 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALM 559 (908)
Q Consensus 480 ~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll 559 (908)
+|..|+++.+..|++.++.+.|++|++|+.+|++.+.+|+|++|.++++....+|++.....+ .+|++||+..++
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~ 75 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDEDGREQIVGFL-----GPGDLFGELALL 75 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEec-----CCccCcChHHHh
Confidence 578999999999999999999999999999999999999999999999999888766554443 789999999999
Q ss_pred cCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 560 YNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 560 ~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
.+.++..+++|.++|.+|.|+++.|.+++.+++....
T Consensus 76 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~ 112 (115)
T cd00038 76 GNGPRSATVRALTDSELLVLPRSDFRRLLQEYPELAR 112 (115)
T ss_pred cCCCCCceEEEcCceEEEEEeHHHHHHHHHHCcHhHH
Confidence 8899999999999999999999999999999886553
No 434
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=99.42 E-value=2.5e-12 Score=132.95 Aligned_cols=110 Identities=21% Similarity=0.249 Sum_probs=100.2
Q ss_pred cCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcC
Q 002560 482 RKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYN 561 (908)
Q Consensus 482 ~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~ 561 (908)
+.+++++++.+++.+..+.|++|++|+.+|++++++|||++|.++++..+.+|++....++ ++|++||+.+++.+
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~~~ 80 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYL-----NQGDFIGELGLFEE 80 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECCCCCEEEEEEc-----CCCCEEeehhhccC
Confidence 4689999999999999999999999999999999999999999999998888877654444 89999999999886
Q ss_pred C-CceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 562 K-PLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 562 ~-~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
. ++.++++|.++|.++.|++++|.+++.++|....
T Consensus 81 ~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~ 116 (211)
T PRK11753 81 GQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILM 116 (211)
T ss_pred CCCceEEEEEcCcEEEEEEcHHHHHHHHHHCHHHHH
Confidence 4 7889999999999999999999999999997653
No 435
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.42 E-value=2.8e-13 Score=154.36 Aligned_cols=121 Identities=14% Similarity=0.211 Sum_probs=102.6
Q ss_pred EEEecCCCeEE-EEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 774 RKCLYSTDCSE-IGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 774 ~~~LG~G~~g~-V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
.+.+|.|+.|+ ||++.. .++.||||.+-... .....+|+..|+.-..||||+++|+.-.+..++||..|.|
T Consensus 514 ~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVY--EGREVAVKRLLEEF------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred HHHcccCCCCcEEEEEee--CCceehHHHHhhHh------HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 35688999875 688877 57899999875433 3467799999999988999999999999999999999999
Q ss_pred CCCcHHHHHcCC------CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 853 LACPLASILHTP------LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 853 ~gg~L~~~l~~~------l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
.++|.+++... ......+....|++.||.+||+.+||||||||.||||+.
T Consensus 586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~ 641 (903)
T KOG1027|consen 586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISV 641 (903)
T ss_pred -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEc
Confidence 58999999832 111445788999999999999999999999999999986
No 436
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.41 E-value=8.8e-13 Score=134.98 Aligned_cols=123 Identities=12% Similarity=0.078 Sum_probs=92.1
Q ss_pred EecCCCeEEEEEEEECCCCceEEEeeechhhhh-----ccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 776 CLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK-----CLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
.||+|+||.||++.. .+..+++|........ ......++.+|..++..+. +++++.....+.+....+++||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~~lv~e 77 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRAR-KAGVNTPVVYDVDPDNKTIVME 77 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEEEEE
Confidence 389999999999984 5678999985432211 1112356788999999985 5544333333345556789999
Q ss_pred cCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 851 TYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 851 ~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
|++|++|.+++...- . .++.+++.+|.+||+.|++|+|++|.|||++ ++.+
T Consensus 78 ~~~g~~l~~~~~~~~--~---~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~ 128 (199)
T TIGR03724 78 YIEGKPLKDVIEEGN--D---ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKL 128 (199)
T ss_pred EECCccHHHHHhhcH--H---HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcE
Confidence 999999998876211 1 7899999999999999999999999999998 5543
No 437
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.40 E-value=7.1e-13 Score=135.52 Aligned_cols=128 Identities=13% Similarity=0.087 Sum_probs=96.6
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhh--cc-----------------chHHHHHHHHHHHHhcCCCC-
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVK--CL-----------------GKEVQVLKEKNLMKSVSPSA- 830 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~--~~-----------------~~~~~~~~E~~il~~l~~~~- 830 (908)
|.+.+.||+|+||.||++... +++.+|+|++...... .. ........|..++..+. ++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~ 94 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALY-EEG 94 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHH-HcC
Confidence 777889999999999999875 7999999987643200 00 01123567888888884 44
Q ss_pred -ccceeeeeeccCCeEEEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 831 -CVPQILCTCADSMHAGLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 831 -~i~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.++..+. ....+++|||++|++|..+... .....++.+++.++.++|++||+||||||+||+++.++.+|
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~ 165 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL----EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIY 165 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc----ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEE
Confidence 4444443 2345899999999998765431 34567889999999999999999999999999999887653
No 438
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.39 E-value=2.6e-13 Score=153.51 Aligned_cols=136 Identities=13% Similarity=0.145 Sum_probs=116.8
Q ss_pred cceEEEEEecCCCeEEEEEEEECCCCc----eEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCe
Q 002560 769 TDMEWRKCLYSTDCSEIGLVLLRDSEN----FLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMH 844 (908)
Q Consensus 769 ~~~~~~~~LG~G~~g~V~~~~~~~~~~----~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~ 844 (908)
...+..++||+|+||+||++.+-..++ +||+|++..... ...-..++.|.-+|.++. |||++++++++....
T Consensus 696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~--~~~s~e~LdeAl~masld-Hpnl~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS--PKASIELLDEALRMASLD-HPNLLRLLGVCMLST- 771 (1177)
T ss_pred hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC--chhhHHHHHHHHHHhcCC-CchHHHHhhhcccch-
Confidence 345556899999999999998765554 788888765443 334567999999999995 999999999987765
Q ss_pred EEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 845 AGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 845 ~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
+-||++|+++|.|.++++ ..+-......|..||++|+.|||.++++||||-..|+|+..-.++|
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvk 838 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVK 838 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEE
Confidence 889999999999999998 6788899999999999999999999999999999999998877765
No 439
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=99.39 E-value=1.5e-12 Score=114.66 Aligned_cols=91 Identities=27% Similarity=0.443 Sum_probs=83.0
Q ss_pred EEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEccceEEE
Q 002560 498 RVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVTNGMLW 577 (908)
Q Consensus 498 ~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~~~~l~ 577 (908)
.++|++|++|+++|+.++.+|||++|.++++..+.+++..+...+ .+|++||+.+++.+.++.++++|.++|.+|
T Consensus 1 ~~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~~~~~~~~~~~-----~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~ 75 (91)
T PF00027_consen 1 EKTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINEDGKEQIIFFL-----GPGDIFGEIELLTGKPSPFTVIALTDSEVL 75 (91)
T ss_dssp -EEESTTEEEEETTSBESEEEEEEESEEEEEEETTTSEEEEEEEE-----ETTEEESGHHHHHTSBBSSEEEESSSEEEE
T ss_pred CeEECCCCEEEeCCCcCCEEEEEEECceEEEeceecceeeeecce-----eeeccccceeecCCCccEEEEEEccCEEEE
Confidence 368999999999999999999999999999999988876544444 789999999999999999999999999999
Q ss_pred EEeHHHHHHHHhhhhh
Q 002560 578 ALKREDFRGILMSEFS 593 (908)
Q Consensus 578 ~i~~~~f~~ll~~~~~ 593 (908)
.|++++|.+++.++|+
T Consensus 76 ~i~~~~~~~~~~~~p~ 91 (91)
T PF00027_consen 76 RIPREDFLQLLQQDPE 91 (91)
T ss_dssp EEEHHHHHHHHHHSHH
T ss_pred EEeHHHHHHHHHhCcC
Confidence 9999999999999874
No 440
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.37 E-value=2.2e-12 Score=152.08 Aligned_cols=127 Identities=13% Similarity=0.064 Sum_probs=97.1
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhh-----hhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQK-----VKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~-----~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
|...+.||+|+||.||++.+... .+++|+..... .........+.+|..++..++ |++++..+.++.+....
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEAR-RAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhc-ccCCCeeEEEEEeCCCC
Confidence 45578899999999999987543 33444321111 111123456889999999995 78887776666666778
Q ss_pred EEEEecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 846 GLLLNTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
+++|||++|++|.+++. ....++.+++.+|.|||++||+||||||+|||++ ++.+
T Consensus 412 ~lv~E~~~g~~L~~~l~------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~~~~ 466 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-DDRL 466 (535)
T ss_pred EEEEEecCCCcHHHHHH------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-CCcE
Confidence 99999999999999875 4567899999999999999999999999999994 4443
No 441
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.35 E-value=2.2e-12 Score=130.55 Aligned_cols=128 Identities=12% Similarity=0.088 Sum_probs=87.5
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHH---------------------HHHHHHHHHHhcCCC-Cc
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEV---------------------QVLKEKNLMKSVSPS-AC 831 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~---------------------~~~~E~~il~~l~~~-~~ 831 (908)
.+.||+|+||.||++.+. +++.+|+|++............ ....|...+..+.++ ..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999886 7899999998653221111111 113455566665322 23
Q ss_pred cceeeeeeccCCeEEEEEecCCCCcHHH-HHcCCCCHHHHHHHHHHHHHHHHHHHh-CCcEecCCCCCcEEEcCCCcc
Q 002560 832 VPQILCTCADSMHAGLLLNTYLACPLAS-ILHTPLDEQSARFCAASVVAALEDLHK-RGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 832 i~~~~~~~~~~~~~~iv~e~~~gg~L~~-~l~~~l~~~~~~~~~~qi~~aL~~LH~-~gIiHrDIKp~NILi~~~g~v 907 (908)
+++.+.. ...+++|||++++++.. .+........++.++.+++.++.++|. +||+||||||+|||++ ++.+
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~ 153 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKV 153 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcE
Confidence 4555443 23589999999854322 111111116788999999999999999 9999999999999998 6554
No 442
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=2.5e-12 Score=153.61 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=109.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcC--CCCccceeeeee
Q 002560 762 SLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVS--PSACVPQILCTC 839 (908)
Q Consensus 762 ~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~--~~~~i~~~~~~~ 839 (908)
....+.-..|.|.+.||+|+||.||+|...+ ++.+|||+-+.....+.-.- ..++.+|+ --+.|+.++..+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~------~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYIC------LQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeeh------HHHHHhhchhhhcchHHHHHHH
Confidence 3445567789999999999999999999887 99999998765543332111 12223331 124566777777
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcC
Q 002560 840 ADSMHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~ 903 (908)
...+..++|+||.+.|+|.++++ +.+++..+.+++.|++.-++.||..+|||+||||+|+||..
T Consensus 764 ~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~ 829 (974)
T KOG1166|consen 764 VFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRR 829 (974)
T ss_pred ccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeec
Confidence 77788899999999999999998 78999999999999999999999999999999999999964
No 443
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=99.33 E-value=1.2e-11 Score=130.07 Aligned_cols=117 Identities=14% Similarity=0.141 Sum_probs=100.3
Q ss_pred HhcCccccCCCHHHHHHHhhcce-EEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcc
Q 002560 475 LHDHFLFRKLTDSQCHVLLDCMQ-RVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSF 553 (908)
Q Consensus 475 l~~~~~f~~L~~~~l~~l~~~~~-~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~f 553 (908)
++..+.|..|++++++.|..... .+.|++|++|+++||+++++|+|++|.++++..+.+|++.+..++ .||++|
T Consensus 15 ~~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~~G~e~i~~~~-----~~gd~~ 89 (235)
T PRK11161 15 ISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFH-----LAGDLV 89 (235)
T ss_pred ccccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECCCCCEEEEEec-----cCCcee
Confidence 34455555799999999999886 578999999999999999999999999999999998887665554 789999
Q ss_pred hhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHH
Q 002560 554 GELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 554 Ge~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~ 597 (908)
|+.+++. .++..+++|+++++++.|+++.|++++.++|.....
T Consensus 90 g~~~~~~-~~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~~ 132 (235)
T PRK11161 90 GFDAIGS-GQHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQQ 132 (235)
T ss_pred ccccccC-CCCcceEEEeccEEEEEEEHHHHHHHHHHChHHHHH
Confidence 9977654 455678999999999999999999999999976543
No 444
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=99.33 E-value=1.1e-11 Score=129.33 Aligned_cols=117 Identities=15% Similarity=0.184 Sum_probs=100.2
Q ss_pred HHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCC
Q 002560 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL 550 (908)
Q Consensus 471 i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G 550 (908)
+...+.++-+-+-+.. .|.+.+..+.|++|++|+.+|++++.+|+|++|.|+++..+.+|++.+..++ .||
T Consensus 10 ~~~~~~~~~~~~~~~~----~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~~G~e~~~~~~-----~~g 80 (226)
T PRK10402 10 ISHYMSESAFKDCFSF----DVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLANGKVSLIDFF-----AAP 80 (226)
T ss_pred HHHHHHHcChhhcCCH----HHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECCCCCEeeeeec-----CCC
Confidence 4445555544333443 4777888999999999999999999999999999999999999988766555 889
Q ss_pred CcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 551 SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 551 ~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
++||+.+++.+.++.++++|+++|+++.|+++.|.+++..+|....
T Consensus 81 ~~~G~~~~~~~~~~~~~~~A~~~~~i~~i~~~~~~~ll~~~p~~~~ 126 (226)
T PRK10402 81 CFIGEIELIDKDHETKAVQAIEECWCLALPMKDCRPLLLNDALFLR 126 (226)
T ss_pred CeEEeehhhcCCCCCccEEEeccEEEEEEEHHHHHHHHhcCHHHHH
Confidence 9999999999999999999999999999999999999999997654
No 445
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.33 E-value=1.2e-11 Score=152.93 Aligned_cols=121 Identities=21% Similarity=0.259 Sum_probs=108.0
Q ss_pred HHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCC
Q 002560 470 HIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEK 549 (908)
Q Consensus 470 ~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~ 549 (908)
....+++++++|++++++.+..|+..++.+.|++||.|+.+|+.++.+|||.+|.|+++.. .++++.+.. .+++
T Consensus 371 l~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~-~~~~e~~l~-----~l~~ 444 (823)
T PLN03192 371 LFLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDS-EGEKERVVG-----TLGC 444 (823)
T ss_pred HHHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEEe-cCCcceeeE-----EccC
Confidence 3456789999999999999999999999999999999999999999999999999999863 344544433 3489
Q ss_pred CCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHH
Q 002560 550 LSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLS 596 (908)
Q Consensus 550 G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~ 596 (908)
|++|||.+++.+.|++++++|.+.|.++.|++++|.++++++|....
T Consensus 445 Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~d~~ 491 (823)
T PLN03192 445 GDIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQEDNV 491 (823)
T ss_pred CCEecchHHhcCCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhHHHH
Confidence 99999999999999999999999999999999999999999987543
No 446
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=99.32 E-value=2e-11 Score=112.86 Aligned_cols=111 Identities=30% Similarity=0.480 Sum_probs=99.6
Q ss_pred cccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhh
Q 002560 480 LFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALM 559 (908)
Q Consensus 480 ~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll 559 (908)
+|.+++++.+..++..+..+.|++|++|+++|++.+.+|+|.+|.++++..+.+|++.....+ .+|++||+..++
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~g~~~~~~~~-----~~g~~~g~~~~~ 75 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLEDGREQILGIL-----GPGDFFGELALL 75 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECCCCceEEEEee-----cCCceechhhhc
Confidence 578999999999999999999999999999999999999999999999998877776554444 889999999998
Q ss_pred --cCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhH
Q 002560 560 --YNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNL 595 (908)
Q Consensus 560 --~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~ 595 (908)
...+...++.|.++|.++.++.+.|...+...+...
T Consensus 76 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 113 (120)
T smart00100 76 TNSRRAASATAVALELATLLRIDFRDFLQLLQENPQLL 113 (120)
T ss_pred cCCCcccceEEEEEeeEEEEccCHHHHHHHHHHhHHHH
Confidence 457889999999999999999999999998887643
No 447
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=99.31 E-value=1.6e-11 Score=126.81 Aligned_cols=114 Identities=25% Similarity=0.343 Sum_probs=102.4
Q ss_pred hcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchh
Q 002560 476 HDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGE 555 (908)
Q Consensus 476 ~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe 555 (908)
...+.|..++.+.+..+......+.|++|++|+++|++++.+|+|++|.++++...++|++.+..++ ++|++||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~~G~~~~~~~~-----~~g~~fg~ 77 (214)
T COG0664 3 KENPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTEDGREIILGFL-----GPGDFFGE 77 (214)
T ss_pred ccccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECCCCcEEEEEEe-----cCCchhhh
Confidence 3456677788888888888899999999999999999999999999999999999999887766655 89999999
Q ss_pred hhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhh
Q 002560 556 LALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594 (908)
Q Consensus 556 ~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~ 594 (908)
.+++.+.|++++++|+++|++|.++++.|.+++.+.|..
T Consensus 78 ~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~p~l 116 (214)
T COG0664 78 LALLGGDPRSASAVALTDVEVLEIPRKDFLELLAESPKL 116 (214)
T ss_pred HHHhcCCCccceEEEcceEEEEEecHHHHHHHHhhCcHH
Confidence 999999999999999999999999999999999884443
No 448
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.31 E-value=2.5e-11 Score=133.44 Aligned_cols=132 Identities=23% Similarity=0.338 Sum_probs=117.3
Q ss_pred eEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEe
Q 002560 771 MEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLN 850 (908)
Q Consensus 771 ~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e 850 (908)
|.+.+.||.|+||.||++.+. ..+++|.+.+...........+.+|..++..+.+++++++++..+......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 788999999999999999987 78899998876654434577899999999999755589999999988888899999
Q ss_pred cCCCCcHHHHHc-C----CCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 851 TYLACPLASILH-T----PLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 851 ~~~gg~L~~~l~-~----~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
++.++++.+++. . .++......++.|++.++.|+|+.|++|||+||+|||++..+
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~ 138 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDG 138 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCC
Confidence 999999997777 2 699999999999999999999999999999999999999876
No 449
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.31 E-value=1.3e-11 Score=129.45 Aligned_cols=126 Identities=16% Similarity=0.231 Sum_probs=91.9
Q ss_pred EEec-CCCeEEEEEEEECCCCceEEEeeechhhh----h------ccchHHHHHHHHHHHHhcCCCCc--cceeeeeecc
Q 002560 775 KCLY-STDCSEIGLVLLRDSENFLSLKRFSKQKV----K------CLGKEVQVLKEKNLMKSVSPSAC--VPQILCTCAD 841 (908)
Q Consensus 775 ~~LG-~G~~g~V~~~~~~~~~~~~alK~~~~~~~----~------~~~~~~~~~~E~~il~~l~~~~~--i~~~~~~~~~ 841 (908)
..|| .|+.|+||.+... +..+++|.+..... . .......+.+|..++..+. +++ ++..+.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~-~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLY-EAGLPVPRPIAARVV 113 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHH-hCCCCCceeEeeeee
Confidence 3466 7778888888763 67899998754221 0 1123456788999999995 555 4666655332
Q ss_pred -CCe---EEEEEecCCC-CcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCcc
Q 002560 842 -SMH---AGLLLNTYLA-CPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 842 -~~~---~~iv~e~~~g-g~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~v 907 (908)
... .++|||+++| .+|.+++. ..+++.. +.+++.+|.+||++||+||||||+|||++.++.+
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v 181 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEAPLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKF 181 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcCCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCE
Confidence 222 3599999997 69998887 5566543 5789999999999999999999999999987754
No 450
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.29 E-value=1.3e-11 Score=147.03 Aligned_cols=140 Identities=13% Similarity=0.170 Sum_probs=121.1
Q ss_pred cccceEEEEEecCCCeEEEEEEEECC---C----CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRD---S----ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC 839 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~---~----~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~ 839 (908)
.-+++++.+.||+|.||.|+++.... . ...+|+|.++..... .....+..|+.+|+.+.+||||+.+.+.+
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 34555667799999999999997431 1 347899988765433 46778999999999998899999999999
Q ss_pred ccCCeEEEEEecCCCCcHHHHHc-CC-----------------CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEE
Q 002560 840 ADSMHAGLLLNTYLACPLASILH-TP-----------------LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLML 901 (908)
Q Consensus 840 ~~~~~~~iv~e~~~gg~L~~~l~-~~-----------------l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi 901 (908)
.....+++++||+..|+|..+|+ .+ ++......++.||+.|++||++..+|||||-..|||+
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI 451 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe
Confidence 99999999999999999999998 45 8899999999999999999999999999999999999
Q ss_pred cCCCccC
Q 002560 902 DKSGHLQ 908 (908)
Q Consensus 902 ~~~g~vK 908 (908)
..+..+|
T Consensus 452 ~~~~~~k 458 (609)
T KOG0200|consen 452 TKNKVIK 458 (609)
T ss_pred cCCCEEE
Confidence 9886554
No 451
>PLN02868 acyl-CoA thioesterase family protein
Probab=99.28 E-value=4.6e-11 Score=135.80 Aligned_cols=115 Identities=22% Similarity=0.271 Sum_probs=101.6
Q ss_pred HHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecC
Q 002560 469 AHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAE 548 (908)
Q Consensus 469 ~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~ 548 (908)
+.+..+|+++++|++|++++++.|+..++.++|++|++|+++|+.++.+|||++|.|+++..+.+| +.+ ...++
T Consensus 4 ~~~~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~~g-e~~-----l~~l~ 77 (413)
T PLN02868 4 ESVVEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAEEE-SRP-----EFLLK 77 (413)
T ss_pred HHHHHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECCCC-cEE-----EEEeC
Confidence 346678999999999999999999999999999999999999999999999999999999988766 332 23448
Q ss_pred CCCcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhh
Q 002560 549 KLSSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSE 591 (908)
Q Consensus 549 ~G~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~ 591 (908)
+|++||+. +.+.++.++++|.++|+++.|+++.|..+....
T Consensus 78 ~Gd~fG~~--l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~ 118 (413)
T PLN02868 78 RYDYFGYG--LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKS 118 (413)
T ss_pred CCCEeehh--hCCCCcccEEEECCCEEEEEEcHHHHhhhcccc
Confidence 99999975 688999999999999999999999988776443
No 452
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.27 E-value=1.8e-11 Score=118.75 Aligned_cols=123 Identities=17% Similarity=0.155 Sum_probs=101.3
Q ss_pred EEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC-CccceeeeeeccCCeEEEEEec
Q 002560 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS-ACVPQILCTCADSMHAGLLLNT 851 (908)
Q Consensus 773 ~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~-~~i~~~~~~~~~~~~~~iv~e~ 851 (908)
+++.||.|.++.||++.... ..+++|....... ...+..|..++..+.++ +.+++++..+...+..|++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 35789999999999999854 7899998765432 35678899999999644 6889999888888899999999
Q ss_pred CCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcEecCCCCCcEEEcCCCcc
Q 002560 852 YLACPLASILHTPLDEQSARFCAASVVAALEDLHKR---GVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 852 ~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~---gIiHrDIKp~NILi~~~g~v 907 (908)
++|..+..+ +......++.+++.+|.+||.. +++|+|++|+|||+++.+.+
T Consensus 75 ~~g~~~~~~-----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~ 128 (155)
T cd05120 75 IEGETLDEV-----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKIL 128 (155)
T ss_pred cCCeecccC-----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEE
Confidence 988777543 5566777899999999999985 79999999999999986654
No 453
>PRK09392 ftrB transcriptional activator FtrB; Provisional
Probab=99.27 E-value=1.3e-11 Score=129.95 Aligned_cols=120 Identities=13% Similarity=0.110 Sum_probs=109.8
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
...+++..++|..++..++..+........|++|++|+++|+..+++|+|.+|.++++...+
T Consensus 5 ~~~~l~~~~~f~~L~~~~~~~l~~~~~~~~~~~ge~l~~~g~~~~~~~~v~~G~v~~~~~~~------------------ 66 (236)
T PRK09392 5 DLIRLRNLPLFADMADATFERLMRGAFLQRFPPGTMLITEGEPADFLFVVLDGLVELSASSQ------------------ 66 (236)
T ss_pred HHHHHhcCccccCCCHHHHHHHHhhcceeecCCCCEEEeCCCccceEEEEEeCEEEEEEcCC------------------
Confidence 34688999999999999999999999999999999999999999999999999999986433
Q ss_pred CCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+++..+..+.+|++||+.+++++.++.++++|.++++++.|++++|.+++...+.+..
T Consensus 67 ----~~~~~i~~~~~g~~~g~~~~~~~~~~~~~~~A~~~~~~~~i~~~~~~~l~~~~p~l~~ 124 (236)
T PRK09392 67 ----DRETTLAILRPVSTFILAAVVLDAPYLMSARTLTRSRVLMIPAELVREAMSEDPGFMR 124 (236)
T ss_pred ----CceEEEEEeCCCchhhhHHHhCCCCCceEEEEcCceEEEEEeHHHHHHHHHHCHHHHH
Confidence 3466889999999999999999999999999999999999999999999988777554
No 454
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.27 E-value=4.9e-10 Score=114.02 Aligned_cols=181 Identities=22% Similarity=0.249 Sum_probs=110.0
Q ss_pred CCcEEEEEecCCCcChHHHHHHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhccCCCCCCcceEEEEEEE--CC
Q 002560 128 QDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVR--GR 205 (908)
Q Consensus 128 ~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~--~~ 205 (908)
++..+++|+|++| ||..||-+ ...+...+........+ ..+.+..+|+.+....... .+++|++++.+. .+
T Consensus 2 ~~~~~~~v~D~~G-hG~~aa~~-~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~-~~~~t~~~~~~d~~~~ 74 (193)
T PF07228_consen 2 DGRYFIIVGDVSG-HGVSAALL-SAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD-NRYATACYAIIDPETG 74 (193)
T ss_dssp TTEEEEEEEEESS-SSHHHHHH-HHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT-STTEEEEEEEEETTTT
T ss_pred CCEEEEEEEEecC-CCHHHHHH-HHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc-cccceEEEEEecccce
Confidence 3557899999998 44433322 22233322221111111 3445567777775442222 357888888876 78
Q ss_pred EEEEEEeccceEEEEEEcCCeeEEEeCCCCCCCCChhHHHHHHHcCCEEeeecccccCCCCCcccCCCCCCCCCCCCcee
Q 002560 206 TIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLW 285 (908)
Q Consensus 206 ~l~vanvGDSR~~l~r~~~~~~~~~~ls~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~r~~ 285 (908)
+++++|+|++++++++.++... ..+....
T Consensus 75 ~l~~~~aG~~~~l~~~~~~~~~--~~~~~~~------------------------------------------------- 103 (193)
T PF07228_consen 75 TLTYANAGHPPPLLLRPGGREI--EQLESEG------------------------------------------------- 103 (193)
T ss_dssp EEEEEEESSSEEEEEETTCTEE--EEETCSS-------------------------------------------------
T ss_pred EEEEeCCCCCCEEEEeccccce--eecccCc-------------------------------------------------
Confidence 8999999999999999754221 1111110
Q ss_pred ccCCCcCccccccccCccccccCCccccceEEEEEeCCCCCEEEEEcCccccccChH-------HHHHHHhc--cCCHHH
Q 002560 286 VPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQ-------AVVDMVAK--YKDPRD 356 (908)
Q Consensus 286 ~~~~~~~g~~~tRs~Gd~~~~~~~v~~~Pdi~~~~l~~~d~flvlaSDGl~d~l~~~-------ei~~~v~~--~~~~~~ 356 (908)
-.+|-. ...++....+++.++|. |+|+||||+|....+ .+.+++.+ ..++++
T Consensus 104 ------------~~lG~~------~~~~~~~~~~~l~~gd~-l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 164 (193)
T PF07228_consen 104 ------------PPLGIF------EDIDYQEQEIQLEPGDR-LLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQE 164 (193)
T ss_dssp ------------BBCSSS------CTTCEEEEEEE--TTEE-EEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHH
T ss_pred ------------cceeee------ccccccceEEEeccccE-EEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHH
Confidence 002211 11355667889999999 799999999998433 34566663 357888
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCeEEEEEEcC
Q 002560 357 ACAAIVAESYRLWLQYETRTDDITVIVVHIN 387 (908)
Q Consensus 357 ~a~~Lv~~a~~~~~~~~g~~DNiTvivv~~~ 387 (908)
.++.|++.+... ......||+|+++++++
T Consensus 165 ~~~~l~~~~~~~--~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 165 IIDALLEAIDRF--GKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp HHHHHHHHHHHH--TTSSTSS-EEEEEEEE-
T ss_pred HHHHHHHHHHHh--cCCCCCCceEEEEEEEC
Confidence 888888888762 23457899999999874
No 455
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.24 E-value=2.4e-11 Score=141.28 Aligned_cols=119 Identities=19% Similarity=0.220 Sum_probs=107.6
Q ss_pred HHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCC
Q 002560 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL 550 (908)
Q Consensus 471 i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G 550 (908)
..++++++|+|+++++.-+..|+..++...|.+|++|++|||+.+.||||.+|.+++...+.+| +.....+++|
T Consensus 417 ~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~g~------~~~~~~L~~G 490 (727)
T KOG0498|consen 417 CLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDGGG------FFVVAILGPG 490 (727)
T ss_pred hHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEccCCc------eEEEEEecCC
Confidence 4678999999999999999999999999999999999999999999999999999998877543 2345567999
Q ss_pred Ccch-hhhhhcC-CCceeEEEEccceEEEEEeHHHHHHHHhhhhhhH
Q 002560 551 SSFG-ELALMYN-KPLQASVRAVTNGMLWALKREDFRGILMSEFSNL 595 (908)
Q Consensus 551 ~~fG-e~sll~~-~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~ 595 (908)
|+|| |+.+... .|.++||+|++.|+++.|++++|..++...+...
T Consensus 491 d~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~ 537 (727)
T KOG0498|consen 491 DFFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLG 537 (727)
T ss_pred CccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHH
Confidence 9999 8888877 8999999999999999999999999999988543
No 456
>PF00027 cNMP_binding: Cyclic nucleotide-binding domain; InterPro: IPR000595 Proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues [, , ]. The best studied of these proteins is the prokaryotic catabolite gene activator (also known as the cAMP receptor protein) (gene crp) where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure. There are six invariant amino acids in this domain, three of which are glycine residues that are thought to be essential for maintenance of the structural integrity of the beta-barrel. cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) contain two tandem copies of the cyclic nucleotide-binding domain. The cAPK's are composed of two different subunits, a catalytic chain and a regulatory chain, which contains both copies of the domain. The cGPK's are single chain enzymes that include the two copies of the domain in their N-terminal section. Vertebrate cyclic nucleotide-gated ion-channels also contain this domain. Two such cations channels have been fully characterised, one is found in rod cells where it plays a role in visual signal transduction.; PDB: 1O7F_A 2BYV_E 3E97_A 3U10_A 2H6B_A 3SHR_A 2OZ6_A 1WGP_A 3LA2_A 3LA3_B ....
Probab=99.22 E-value=1.6e-11 Score=108.10 Aligned_cols=90 Identities=21% Similarity=0.359 Sum_probs=81.2
Q ss_pred ccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhccc
Q 002560 624 EVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGE 703 (908)
Q Consensus 624 ~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~ 703 (908)
+++|++|++|+++|+..+.+|+|++|.+++..... .+....+..+.+|++||+.+++.+
T Consensus 1 ~~~~~~g~~i~~~g~~~~~~~~i~~G~v~~~~~~~---------------------~~~~~~~~~~~~g~~~g~~~~~~~ 59 (91)
T PF00027_consen 1 EKTYKKGEVIYRQGDPCDHIYIILSGEVKVSSINE---------------------DGKEQIIFFLGPGDIFGEIELLTG 59 (91)
T ss_dssp -EEESTTEEEEETTSBESEEEEEEESEEEEEEETT---------------------TSEEEEEEEEETTEEESGHHHHHT
T ss_pred CeEECCCCEEEeCCCcCCEEEEEEECceEEEecee---------------------cceeeeecceeeeccccceeecCC
Confidence 36799999999999999999999999999988765 344557899999999999999999
Q ss_pred CcccceEeecCceEEEEecccccccccCccc
Q 002560 704 HMGSLTAVAVDDVVCAILTKEKFDLVVGPLT 734 (908)
Q Consensus 704 ~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~ 734 (908)
.++.++++|.++++++.|++++|.+++...|
T Consensus 60 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~p 90 (91)
T PF00027_consen 60 KPSPFTVIALTDSEVLRIPREDFLQLLQQDP 90 (91)
T ss_dssp SBBSSEEEESSSEEEEEEEHHHHHHHHHHSH
T ss_pred CccEEEEEEccCEEEEEEeHHHHHHHHHhCc
Confidence 9999999999999999999999999887654
No 457
>cd00038 CAP_ED effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO sensor. In all cases binding of the effector leads to conformational changes and the ability to activate transcription. Cyclic nucleotide-binding domain similar to CAP are also present in cAMP- and cGMP-dependent protein kinases (cAPK and cGPK) and vertebrate cyclic nucleotide-gated ion-channels. Cyclic nucleotide-monophosphate binding domain; proteins that bind cyclic nucleotides (cAMP or cGMP) share a structural domain of about 120 residues; the best studied is the prokaryotic catabolite gene activator, CAP, where such a domain is known to be composed of three alpha-helices and a distinctive eight-stranded, antiparallel beta-barrel structure; three conserved glycine residues are thought to be essential for maintenance of
Probab=99.18 E-value=8.1e-11 Score=108.04 Aligned_cols=111 Identities=28% Similarity=0.415 Sum_probs=100.9
Q ss_pred hhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCcccee
Q 002560 606 LLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKEL 685 (908)
Q Consensus 606 ~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (908)
+|..++...+..+...++...|.+|++|+.+|+..+.+|+|.+|.++++.... ++.+..
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~~~~~~~~~~i~~G~v~~~~~~~---------------------~g~~~~ 59 (115)
T cd00038 1 LFSGLDDEELEELADALEERRFPAGEVIIRQGDPADSLYIVLSGSVEVYKLDE---------------------DGREQI 59 (115)
T ss_pred CcccCCHHHHHHHHhhceeeeeCCCCEEEcCCCCCCeEEEEEeCEEEEEEECC---------------------CCcEEE
Confidence 36788999999999999999999999999999999999999999999987654 356778
Q ss_pred eeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccccc
Q 002560 686 SVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 686 v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
+..+.+|++||+.+++.+.++.++++|.+++.++.|++++|.+++...+.+.
T Consensus 60 ~~~~~~g~~~g~~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~ 111 (115)
T cd00038 60 VGFLGPGDLFGELALLGNGPRSATVRALTDSELLVLPRSDFRRLLQEYPELA 111 (115)
T ss_pred EEecCCccCcChHHHhcCCCCCceEEEcCceEEEEEeHHHHHHHHHHCcHhH
Confidence 9999999999999999889999999999999999999999999988776654
No 458
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.16 E-value=5.2e-12 Score=141.15 Aligned_cols=132 Identities=21% Similarity=0.287 Sum_probs=116.8
Q ss_pred EecCCCeEEEEEEEE---CCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecC
Q 002560 776 CLYSTDCSEIGLVLL---RDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTY 852 (908)
Q Consensus 776 ~LG~G~~g~V~~~~~---~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~ 852 (908)
.+|.|+||.|++|+- ...+..||+|++++......... +...|..++..++.||++++++..|+.+..+|+++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999999854 34678999999987665443333 77788899999877999999999999999999999999
Q ss_pred CCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 853 LACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 853 ~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
.||+|+..+. ..+.+...+.+.++++.+++++|+.||+|||+|++||+++.+|++|
T Consensus 80 rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~ 137 (612)
T KOG0603|consen 80 RGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIK 137 (612)
T ss_pred ccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccc
Confidence 9999999887 6789999999999999999999999999999999999999999886
No 459
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=99.14 E-value=2.3e-10 Score=125.82 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=107.5
Q ss_pred HHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCC
Q 002560 471 IERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKL 550 (908)
Q Consensus 471 i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G 550 (908)
+.++++.+|+|+.|++++++.|...+....|++||+|+..|.+..++|+|.+|.|+++..+. + ++..+ ..|
T Consensus 5 ~~~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~g--~-----v~~~~--~~g 75 (610)
T COG2905 5 PDQFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDGG--E-----VLDRL--AAG 75 (610)
T ss_pred HHHHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcCCC--e-----eeeee--ccC
Confidence 57899999999999999999999999999999999999999999999999999999986543 2 23322 569
Q ss_pred CcchhhhhhcCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHHH
Q 002560 551 SSFGELALMYNKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL 598 (908)
Q Consensus 551 ~~fGe~sll~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~~ 598 (908)
+.||-.+|+...+...+..|++|+.+|.|+++.|.+++.++|.+..++
T Consensus 76 dlFg~~~l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~~ff 123 (610)
T COG2905 76 DLFGFSSLFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFADFF 123 (610)
T ss_pred ccccchhhcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHHHHH
Confidence 999999999999999999999999999999999999999999877665
No 460
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.13 E-value=1.7e-10 Score=142.72 Aligned_cols=117 Identities=17% Similarity=0.134 Sum_probs=107.5
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
+..+++++++|+.++...+..|+..++.+.|.+|+.|+.||+.++.+|||.+|+|++....+
T Consensus 372 ~~~~l~~~~lF~~~s~~~l~~L~~~~~~~~~~pge~I~~qge~~~~lY~I~~G~V~i~~~~~------------------ 433 (823)
T PLN03192 372 FLPVVEKVYLFKGVSREILLLLVTKMKAEYIPPREDVIMQNEAPDDVYIVVSGEVEIIDSEG------------------ 433 (823)
T ss_pred HHHHHhhCcchhcCCHHHHHHHHHhhheeeeCCCCEEEECCCCCceEEEEEecEEEEEEecC------------------
Confidence 34678999999999999999999999999999999999999999999999999999975332
Q ss_pred CCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccc
Q 002560 677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTK 735 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~ 735 (908)
+.+..+..+++|++|||.+++.+.|++++++|.+.++++.|++++|.+++...++
T Consensus 434 ----~~e~~l~~l~~Gd~FGE~~~l~~~p~~~t~ra~~~s~ll~l~~~~f~~ll~~~p~ 488 (823)
T PLN03192 434 ----EKERVVGTLGCGDIFGEVGALCCRPQSFTFRTKTLSQLLRLKTSTLIEAMQTRQE 488 (823)
T ss_pred ----CcceeeEEccCCCEecchHHhcCCCCCCeEEEcccEEEEEEEHHHHHHHHHHhhH
Confidence 3466789999999999999999999999999999999999999999999987765
No 461
>PRK11753 DNA-binding transcriptional dual regulator Crp; Provisional
Probab=99.12 E-value=2e-10 Score=118.77 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=99.1
Q ss_pred ccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeee
Q 002560 608 SRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSV 687 (908)
Q Consensus 608 ~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 687 (908)
+.++.+++..++..+....|++|++|+.+|++.+.+|+|++|.++++.... ++++..+.
T Consensus 6 ~~~~~~~~~~l~~~~~~~~~~kg~~l~~~g~~~~~~y~V~~G~v~~~~~~~---------------------~g~~~~~~ 64 (211)
T PRK11753 6 KPQTDPTLEWFLSHCHIHKYPAKSTLIHAGEKAETLYYIVKGSVAVLIKDE---------------------EGKEMILS 64 (211)
T ss_pred CCCCHHHHHHHHhhCeEEEeCCCCEEEeCCCCCCeEEEEEeCEEEEEEECC---------------------CCCEEEEE
Confidence 468899999999999999999999999999999999999999999987544 46678899
Q ss_pred EcCCCCeechhhhccc-CcccceEeecCceEEEEecccccccccCccccccc
Q 002560 688 EKSEGSYFGEWTLLGE-HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 688 ~l~~G~~FGe~all~~-~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
.+++|++||+.+++.. .++.++++|.+++.++.|++++|.+++...+.+..
T Consensus 65 ~~~~g~~~g~~~~~~~~~~~~~~~~a~~~~~v~~i~~~~~~~l~~~~p~~~~ 116 (211)
T PRK11753 65 YLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILM 116 (211)
T ss_pred EcCCCCEEeehhhccCCCCceEEEEEcCcEEEEEEcHHHHHHHHHHCHHHHH
Confidence 9999999999999886 46888999999999999999999999888777653
No 462
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=99.11 E-value=6.8e-10 Score=116.13 Aligned_cols=98 Identities=12% Similarity=0.144 Sum_probs=85.9
Q ss_pred HhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEc
Q 002560 492 LLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAV 571 (908)
Q Consensus 492 l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~ 571 (908)
+...+..++|++|++|+.+||+++++|+|++|.|+++..+++|++.+..++ .+|++||+. .+.++.++++|+
T Consensus 34 ~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~~G~e~i~~~~-----~~Gd~fG~~---~~~~~~~~~~A~ 105 (230)
T PRK09391 34 AGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLSDGRRQIGAFH-----LPGDVFGLE---SGSTHRFTAEAI 105 (230)
T ss_pred ccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECCCCcEEEEEEe-----cCCceeccc---CCCcCCeEEEEc
Confidence 345577899999999999999999999999999999999999987665554 789999964 466788999999
Q ss_pred cceEEEEEeHHHHHHHHhhhhhhHHH
Q 002560 572 TNGMLWALKREDFRGILMSEFSNLSS 597 (908)
Q Consensus 572 ~~~~l~~i~~~~f~~ll~~~~~~~~~ 597 (908)
++|.++.|+++.|.+++.++|.....
T Consensus 106 ~ds~v~~i~~~~f~~l~~~~p~l~~~ 131 (230)
T PRK09391 106 VDTTVRLIKRRSLEQAAATDVDVARA 131 (230)
T ss_pred CceEEEEEEHHHHHHHHhhChHHHHH
Confidence 99999999999999999999976543
No 463
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.08 E-value=3e-10 Score=122.45 Aligned_cols=119 Identities=20% Similarity=0.263 Sum_probs=108.9
Q ss_pred HHHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccc
Q 002560 596 SSLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVE 675 (908)
Q Consensus 596 ~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~ 675 (908)
-.+..|+++++|+.-.+.-+..|...|+.+.|+||++|+++||.+...|||++|.+.|.-...
T Consensus 304 vh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dDg----------------- 366 (536)
T KOG0500|consen 304 VHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADDG----------------- 366 (536)
T ss_pred HHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEecCC-----------------
Confidence 456889999999999999999999999999999999999999999999999999999976544
Q ss_pred cCCCCccceeeeEcCCCCeechhhhcc------cCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 676 DDGTQSSKELSVEKSEGSYFGEWTLLG------EHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 676 ~~~~~~~~~~v~~l~~G~~FGe~all~------~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
.....+|.+|++|||.++|+ ++.|+++|++++=+.+++++|+|+.+++.++|+...
T Consensus 367 -------~t~~~~L~~G~~FGEisIlni~g~~~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~ 428 (536)
T KOG0500|consen 367 -------VTVFVTLKAGSVFGEISILNIKGNKNGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARK 428 (536)
T ss_pred -------cEEEEEecCCceeeeeEEEEEcCcccCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHH
Confidence 45788999999999999984 478999999999999999999999999999988554
No 464
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=99.07 E-value=7.1e-10 Score=112.85 Aligned_cols=89 Identities=18% Similarity=0.161 Sum_probs=79.5
Q ss_pred CCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCC--ceeEEEEccceEEEEEeH
Q 002560 504 GDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKP--LQASVRAVTNGMLWALKR 581 (908)
Q Consensus 504 ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~--r~~tv~A~~~~~l~~i~~ 581 (908)
|++|+++|++++++|+|++|.|+++...++|++.+..++ +||++||+.+++.+.+ +.++++|.++|+++.|++
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~~G~e~~l~~~-----~~g~~~G~~~~~~~~~~~~~~~~~A~~~~~v~~i~~ 75 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYESGEEITVALL-----RENSVFGVLSLITGHRSDRFYHAVAFTRVELLAVPI 75 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCCCCcEeeeEEc-----cCCCEeeeeeeccCCCCccceEEEEecceEEEEeeH
Confidence 789999999999999999999999999999988665554 8999999999998865 457899999999999999
Q ss_pred HHHHHHHhhhhhhHHH
Q 002560 582 EDFRGILMSEFSNLSS 597 (908)
Q Consensus 582 ~~f~~ll~~~~~~~~~ 597 (908)
+.|.+++.++|.....
T Consensus 76 ~~~~~l~~~~p~l~~~ 91 (193)
T TIGR03697 76 EQVEKAIEEDPDLSML 91 (193)
T ss_pred HHHHHHHHHChHHHHH
Confidence 9999999999976543
No 465
>smart00100 cNMP Cyclic nucleotide-monophosphate binding domain. Catabolite gene activator protein (CAP) is a prokaryotic homologue of eukaryotic cNMP-binding domains, present in ion channels, and cNMP-dependent kinases.
Probab=99.06 E-value=3.5e-10 Score=104.50 Aligned_cols=113 Identities=26% Similarity=0.374 Sum_probs=99.6
Q ss_pred hhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCcccee
Q 002560 606 LLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKEL 685 (908)
Q Consensus 606 ~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (908)
+|..++...+..++..+....|.+|++|+++|++.+++|+|.+|.++++.... .+....
T Consensus 1 ~f~~l~~~~~~~l~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~---------------------~g~~~~ 59 (120)
T smart00100 1 LFKNLDAEELRELADALEPVRYPAGEVIIRQGDVGDSFYIILSGEVRVYKVLE---------------------DGREQI 59 (120)
T ss_pred CcCCCCHHHHHHHHHhceEEEeCCCCEEEeCCCcCCcEEEEEeeEEEEEEECC---------------------CCceEE
Confidence 36789999999999999999999999999999999999999999999987543 355778
Q ss_pred eeEcCCCCeechhhhc--ccCcccceEeecCceEEEEecccccccccCcccccccc
Q 002560 686 SVEKSEGSYFGEWTLL--GEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHD 739 (908)
Q Consensus 686 v~~l~~G~~FGe~all--~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~ 739 (908)
+..+.+|++||+.+++ ...+...++.+.+++.++.++.+.|...+...+.++.+
T Consensus 60 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 115 (120)
T smart00100 60 LGILGPGDFFGELALLTNSRRAASATAVALELATLLRIDFRDFLQLLQENPQLLLE 115 (120)
T ss_pred EEeecCCceechhhhccCCCcccceEEEEEeeEEEEccCHHHHHHHHHHhHHHHHH
Confidence 9999999999999998 44778899999999999999999999888777766543
No 466
>COG0664 Crp cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]
Probab=99.06 E-value=4.4e-10 Score=116.09 Aligned_cols=108 Identities=27% Similarity=0.349 Sum_probs=96.5
Q ss_pred chhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccc
Q 002560 604 VDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSK 683 (908)
Q Consensus 604 ~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (908)
...|..+.......++.......+++|++|+.+|++++.+|+|.+|.+++++... ++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~~~~~~y~v~~G~v~~~~~~~---------------------~G~~ 63 (214)
T COG0664 5 NPLLNLLPSELLELLALKLEVRKLPKGEVLFTEGEEADSLYIILSGIVKLYANTE---------------------DGRE 63 (214)
T ss_pred ccccccCCHHHHHHHhhhceeEeeCCCCEEEcCCCcCceEEEEEEeEEEEEEECC---------------------CCcE
Confidence 3455556777777777888899999999999999999999999999999998765 4678
Q ss_pred eeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCc
Q 002560 684 ELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGP 732 (908)
Q Consensus 684 ~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~ 732 (908)
..+..+++|++||+.+++.+.++.++++|.++++++.++++.|.+++..
T Consensus 64 ~~~~~~~~g~~fg~~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 112 (214)
T COG0664 64 IILGFLGPGDFFGELALLGGDPRSASAVALTDVEVLEIPRKDFLELLAE 112 (214)
T ss_pred EEEEEecCCchhhhHHHhcCCCccceEEEcceEEEEEecHHHHHHHHhh
Confidence 8899999999999999999999999999999999999999999887765
No 467
>KOG0498 consensus K+-channel ERG and related proteins, contain PAS/PAC sensor domain [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.03 E-value=3e-10 Score=132.30 Aligned_cols=120 Identities=20% Similarity=0.256 Sum_probs=108.0
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
.+.+++++|+|+.+++.-+..|+..++...|.+|++|++|||..+.+|||.+|.+++.....
T Consensus 417 ~~~lv~~vpLF~~md~~~L~al~~rlk~~~f~pge~iireGd~v~~myFI~rG~le~~~~~~------------------ 478 (727)
T KOG0498|consen 417 CLDLVRKVPLFAGMDDGLLDALCSRLKPEYFTPGEYIIREGDPVTDMYFIVRGSLESITTDG------------------ 478 (727)
T ss_pred hHHHHhhCchhhcCCHHHHHHHHHHhhhhccCCCCeEEecCCccceeEEEEeeeEEEEEccC------------------
Confidence 45789999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCCccceeeeEcCCCCeec-hhhhccc-CcccceEeecCceEEEEecccccccccCccccccc
Q 002560 677 DGTQSSKELSVEKSEGSYFG-EWTLLGE-HMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FG-e~all~~-~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+....+..|++||+|| |..+... -|.++||.|.+-|+++.|.+++|..++..++.+-.
T Consensus 479 ----g~~~~~~~L~~Gd~~GeEl~~~~~~~p~t~TVralt~~el~~L~~~dL~~V~~~f~~~~~ 538 (727)
T KOG0498|consen 479 ----GGFFVVAILGPGDFFGEELLTWCLDLPQTRTVRALTYCELFRLSADDLKEVLQQFRRLGS 538 (727)
T ss_pred ----CceEEEEEecCCCccchHHHHHHhcCCCCceeehhhhhhHHhccHHHHHHHHHHhHHHHH
Confidence 3567899999999999 6666555 78899999999999999999999999888775443
No 468
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=99.02 E-value=1.6e-09 Score=111.12 Aligned_cols=84 Identities=24% Similarity=0.274 Sum_probs=75.2
Q ss_pred cceEEEecCCCEEEcCCC--cCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhhhhhcCCCceeEEEEcc
Q 002560 495 CMQRVEVQAGDIVVKQGG--EGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGELALMYNKPLQASVRAVT 572 (908)
Q Consensus 495 ~~~~~~~~~ge~I~~~Gd--~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~sll~~~~r~~tv~A~~ 572 (908)
.++.+.|++|++|+++|| +++.+|+|++|.|+++..+.+|++.+..++ .||++||+.+++ +.++++++.|++
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~~G~e~~l~~~-----~~Gd~~G~~~~~-~~~~~~~~~A~~ 78 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDDEGNALTLRYV-----RPGEYFGEEALA-GAERAYFAEAVT 78 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECCCCCEEEEEEe-----cCCCeechHHhc-CCCCCceEEEcC
Confidence 467789999999999999 779999999999999999999998766655 899999997654 578999999999
Q ss_pred ceEEEEEeHHHH
Q 002560 573 NGMLWALKREDF 584 (908)
Q Consensus 573 ~~~l~~i~~~~f 584 (908)
+|+++.|+++.|
T Consensus 79 ~~~v~~i~~~~~ 90 (202)
T PRK13918 79 DSRIDVLNPALM 90 (202)
T ss_pred ceEEEEEEHHHc
Confidence 999999998876
No 469
>PLN02868 acyl-CoA thioesterase family protein
Probab=99.02 E-value=1.6e-09 Score=123.35 Aligned_cols=114 Identities=25% Similarity=0.379 Sum_probs=100.9
Q ss_pred HHHHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCcccc
Q 002560 597 SLKLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVED 676 (908)
Q Consensus 597 ~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~ 676 (908)
...+++++++|+.++..++.+|+..+....|++|++|+++|+..+.+|+|++|.|++++...
T Consensus 6 ~~~~L~~~~~F~~L~~~~l~~l~~~~~~~~~~~Ge~I~~~Gd~~~~lyiI~~G~V~v~~~~~------------------ 67 (413)
T PLN02868 6 VVEFLGSVPLLQRLPSSSLKKIAEVVVPKRYGKGEYVVREGEPGDGLYFIWKGEAEVSGPAE------------------ 67 (413)
T ss_pred HHHHHhcCcccccCCHHHHHHHHHhceEEEECCCCEEEeCCCcCceEEEEEeCEEEEEEECC------------------
Confidence 34678899999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccc
Q 002560 677 DGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLT 734 (908)
Q Consensus 677 ~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~ 734 (908)
++ +..+..+++|++||+. +.+.++.++++|.++++|+.|+++.|..+.....
T Consensus 68 ---~g-e~~l~~l~~Gd~fG~~--l~~~~~~~~~~A~~d~~v~~ip~~~~~~~~~~~~ 119 (413)
T PLN02868 68 ---EE-SRPEFLLKRYDYFGYG--LSGSVHSADVVAVSELTCLVLPHEHCHLLSPKSI 119 (413)
T ss_pred ---CC-cEEEEEeCCCCEeehh--hCCCCcccEEEECCCEEEEEEcHHHHhhhccccc
Confidence 23 5678899999999975 6789999999999999999999999976654433
No 470
>PRK10402 DNA-binding transcriptional activator YeiL; Provisional
Probab=99.00 E-value=9.1e-10 Score=114.95 Aligned_cols=101 Identities=14% Similarity=0.184 Sum_probs=91.5
Q ss_pred HHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeec
Q 002560 617 HLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFG 696 (908)
Q Consensus 617 ~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FG 696 (908)
.+......+.|++|++|+.+|++.+.+|+|.+|.|+++.... ++++..+..+.+|++||
T Consensus 26 ~i~~~~~~~~~~kge~l~~~G~~~~~~y~V~~G~v~v~~~~~---------------------~G~e~~~~~~~~g~~~G 84 (226)
T PRK10402 26 DVSADTELFHFLAREYIVQEGQQPSYLFYLTRGRAKLYATLA---------------------NGKVSLIDFFAAPCFIG 84 (226)
T ss_pred HHHhhhhheeeCCCCEEEcCCCCCceEEEEEeCEEEEEEECC---------------------CCCEeeeeecCCCCeEE
Confidence 467778888999999999999999999999999999987654 46678899999999999
Q ss_pred hhhhcccCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 697 EWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 697 e~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+.+++.+.++.+++.|.++++++.|+++.|.+++...+.+..
T Consensus 85 ~~~~~~~~~~~~~~~A~~~~~i~~i~~~~~~~ll~~~p~~~~ 126 (226)
T PRK10402 85 EIELIDKDHETKAVQAIEECWCLALPMKDCRPLLLNDALFLR 126 (226)
T ss_pred eehhhcCCCCCccEEEeccEEEEEEEHHHHHHHHhcCHHHHH
Confidence 999999999999999999999999999999999988776654
No 471
>KOG3542 consensus cAMP-regulated guanine nucleotide exchange factor [Signal transduction mechanisms]
Probab=98.98 E-value=4.4e-09 Score=115.86 Aligned_cols=257 Identities=17% Similarity=0.171 Sum_probs=172.4
Q ss_pred cccccCCHHHHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEec--c---
Q 002560 458 SSAHRKTWEEEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQ--E--- 532 (908)
Q Consensus 458 ~~~~~k~~e~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~--~--- 532 (908)
++++-+++.++.-....|.....|++|-...++.++....++.++...++|+.|+.+.++||+++|.|-|.-.- +
T Consensus 22 k~~~~~t~~~~rN~~~~lh~ld~~snl~~~~lk~l~~~aryer~~g~~ilf~~~~var~wyillsgsv~v~gqi~mp~~~ 101 (1283)
T KOG3542|consen 22 KPPHLRTPDDIRNVYEQLHQLDTFSNLFIGPLKALCKTARYERHPGQYILFRDGDVARSWYILLSGSVFVEGQIYMPYGC 101 (1283)
T ss_pred CCcccCChhhhhhHHHHHhhhhhhhhhhhhhHHHhhhhhhhhcCCCceEEecccchhhheeeeeccceEeecceecCccc
Confidence 34556677777777778999999999999999999999999999999999999999999999999998763200 0
Q ss_pred ----ccCcccce--------EEEe-eecCC------------C-----C---cchhh----------hh-----------
Q 002560 533 ----EKNGEVPR--------VLQR-YTAEK------------L-----S---SFGEL----------AL----------- 558 (908)
Q Consensus 533 ----~g~~~~~~--------~~~~-~~~~~------------G-----~---~fGe~----------sl----------- 558 (908)
-|....-. .+.+ |--.+ + + .=||- ++
T Consensus 102 fgkr~g~~r~~nclllq~semivid~~~e~q~n~ms~~~p~rq~~~~~~~v~~k~erks~~~~~~~~a~~slPad~tklh 181 (1283)
T KOG3542|consen 102 FGKRTGQNRTHNCLLLQESEMIVIDYPTEPQSNGMSPRTPPRQIHHSGEPVHQKTERKSAPNMSVDIAMPSLPADPTKLH 181 (1283)
T ss_pred cccccccccccceeeecccceeeeecCCCccccccCCCCCcccccccCCccccccccccCCccchhccCCCCCCCccccc
Confidence 01000000 0000 00000 0 0 00000 00
Q ss_pred hcCCCce-----------eEEE-----------------EccceEE-------------------------EEEeHHHHH
Q 002560 559 MYNKPLQ-----------ASVR-----------------AVTNGML-------------------------WALKREDFR 585 (908)
Q Consensus 559 l~~~~r~-----------~tv~-----------------A~~~~~l-------------------------~~i~~~~f~ 585 (908)
+...|.+ +++. .+.+..+ -..+|+..+
T Consensus 182 Lt~~phPqvthvSSS~SgcSi~sdsGsSsLsdiyqatEsevGdidl~rLpEtavDSedDe~e~e~ierssdplm~RD~VR 261 (1283)
T KOG3542|consen 182 LTQTPHPQVTHVSSSSSGCSINSDSGSSSLSDIYQATESEVGDIDLARLPETAVDSEDDEGEMESIERSSDPLMDRDSVR 261 (1283)
T ss_pred CCCCCCCCCceeccCCCCCceeCCCCchHHHHHHHHhhccccccccccCCCCCCCcccccccchhhhhcCCCccchHHHH
Confidence 0000100 0000 0000001 112244555
Q ss_pred HHHhhhhh------hHHHHHHhhhchhhccCCHHHHHHHHHhcccccc-CCCCEEEEcCCCCCeEEEEEecEEEEEEccc
Q 002560 586 GILMSEFS------NLSSLKLLRSVDLLSRLTILQLSHLADTLSEVSF-SAGQTIVNMNEGVAALYIIQRGQVRITFDAD 658 (908)
Q Consensus 586 ~ll~~~~~------~~~~~~~l~~~~~l~~l~~~~~~~l~~~l~~~~~-~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~ 658 (908)
+.|.+.|. ....+.|+.+.+.|..|+-..+..|+..+....+ .+|.+|+..|++.|.+|+|++|.|+|++...
T Consensus 262 eCLEKeP~drtddDieqLLeFMhqlpAFAnmtMSvrReLC~vMvFaVVe~AGtivL~dgeeLDSWsVIlNG~VEv~~PdG 341 (1283)
T KOG3542|consen 262 ECLEKEPSDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCLVMVFAVVEDAGTIVLADGEELDSWSVILNGCVEVVKPDG 341 (1283)
T ss_pred HHHhcCCcccchHHHHHHHHHHHhchHhhcccHHHHHHHHHHHHHHHHhhcCeEEecCCcccceeEEEecceEEEecCCC
Confidence 55655553 3356789999999999999999999998887655 7899999999999999999999999987554
Q ss_pred ccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEe-ecCceEEEEecccccccccCcccccc
Q 002560 659 LLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAV-AVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~-a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
....|.-|+-||-..-+..+...-.+. -++||+..+|...+|-+++..+.+-+
T Consensus 342 --------------------------k~e~l~mGnSFG~~PT~dkqym~G~mRTkVDDCqFVciaqqDycrIln~vekn~ 395 (1283)
T KOG3542|consen 342 --------------------------KREELKMGNSFGAEPTPDKQYMIGEMRTKVDDCQFVCIAQQDYCRILNTVEKNI 395 (1283)
T ss_pred --------------------------ceEEeecccccCCCCCcchhhhhhhhheecccceEEEeehhhHHHHHHHHHhhh
Confidence 355678899999765555433333332 45899999999999999998887766
Q ss_pred ccc
Q 002560 738 HDD 740 (908)
Q Consensus 738 ~~~ 740 (908)
++.
T Consensus 396 ~Kv 398 (1283)
T KOG3542|consen 396 EKV 398 (1283)
T ss_pred hhh
Confidence 654
No 472
>KOG0500 consensus Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.96 E-value=3.4e-09 Score=114.45 Aligned_cols=124 Identities=21% Similarity=0.269 Sum_probs=107.2
Q ss_pred HHHHHHHHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeee
Q 002560 467 EEAHIERALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYT 546 (908)
Q Consensus 467 ~~~~i~~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~ 546 (908)
..+...+.|+++++|+.-.+.-+.+|+-.++...|.||++|++.||.+..||||.+|.+.|...+ |... + .+
T Consensus 301 A~nvh~dTLkkV~iF~~ce~~lL~elVLklk~qvfSPgDyICrKGdvgkEMyIVk~G~L~Vv~dD--g~t~----~--~~ 372 (536)
T KOG0500|consen 301 AINVHLDTLKKVRIFQDCEAGLLVELVLKLKPQVFSPGDYICRKGDVGKEMYIVKEGKLAVVADD--GVTV----F--VT 372 (536)
T ss_pred HHHHHHHHHHhhhHHHhcchhHHHHHHHHhcceeeCCCCeEEecCcccceEEEEEccEEEEEecC--CcEE----E--EE
Confidence 34556788999999999999999999999999999999999999999999999999999997543 3221 1 24
Q ss_pred cCCCCcchhhhhhc------CCCceeEEEEccceEEEEEeHHHHHHHHhhhhhhHHHH
Q 002560 547 AEKLSSFGELALMY------NKPLQASVRAVTNGMLWALKREDFRGILMSEFSNLSSL 598 (908)
Q Consensus 547 ~~~G~~fGe~sll~------~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~~ 598 (908)
+.+|++|||++++. +..|+++|+.+.-+.+++++++++.+.|.+.|+.+..+
T Consensus 373 L~~G~~FGEisIlni~g~~~gNRRtanvrSvGYSDlfvLskdDl~~aL~eYP~a~~~L 430 (536)
T KOG0500|consen 373 LKAGSVFGEISILNIKGNKNGNRRTANVRSVGYSDLFVLSKDDLWEALSEYPDARKRL 430 (536)
T ss_pred ecCCceeeeeEEEEEcCcccCCcceeeeeeeccceeeEeeHHHHHHHHHhCCHHHHHH
Confidence 47899999999862 47899999999999999999999999999999765433
No 473
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=98.96 E-value=3.7e-10 Score=118.84 Aligned_cols=146 Identities=17% Similarity=0.170 Sum_probs=104.1
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEEECCCCc-----------------------------------eEEEe
Q 002560 756 KSIDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSEN-----------------------------------FLSLK 800 (908)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~-----------------------------------~~alK 800 (908)
.+.+..-...+++++|++...||+|....||.++.+..+. +.|+|
T Consensus 144 Dei~~r~dskFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiK 223 (598)
T KOG4158|consen 144 DEIPNRIDSKFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIK 223 (598)
T ss_pred CcCcchhhcccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHH
Confidence 3344445567899999999999999999999986543110 23556
Q ss_pred eechhhhhc--cchHHHHHHHH-----------------HHHH----hcCCCCccceeeeeecc----------------
Q 002560 801 RFSKQKVKC--LGKEVQVLKEK-----------------NLMK----SVSPSACVPQILCTCAD---------------- 841 (908)
Q Consensus 801 ~~~~~~~~~--~~~~~~~~~E~-----------------~il~----~l~~~~~i~~~~~~~~~---------------- 841 (908)
++..-...+ ....+...+|. +.+. .|..||||++++..|.+
T Consensus 224 mMfN~~~~s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdal 303 (598)
T KOG4158|consen 224 MMFNFEHDSGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDAL 303 (598)
T ss_pred HhcccccCCchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccc
Confidence 553222111 00111111110 0011 23459999999877743
Q ss_pred -----------CCeEEEEEecCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEc
Q 002560 842 -----------SMHAGLLLNTYLACPLASILH-TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLD 902 (908)
Q Consensus 842 -----------~~~~~iv~e~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~ 902 (908)
...+|+||..+ ..+|..++. ...+....+.+++|+++|+.|||.+||.|||+|.+||||.
T Consensus 304 p~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~E 375 (598)
T KOG4158|consen 304 PARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLE 375 (598)
T ss_pred cceecccccCCCceEEEehhcc-hhhHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEE
Confidence 34689999988 469999998 8889999999999999999999999999999999999995
No 474
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.95 E-value=6.9e-10 Score=127.88 Aligned_cols=127 Identities=17% Similarity=0.263 Sum_probs=83.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhc-------------------------------cchHHHH
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKC-------------------------------LGKEVQV 816 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~-------------------------------~~~~~~~ 816 (908)
+.+|+. +.||+|++|.||+|+.+.+|+.||||+.++..... .+..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 455666 78999999999999999889999999987532100 0112333
Q ss_pred HHHHHHHHhcCCCCccceeeeeecc-------------CCeEEEEEecCCCCcHHHH--Hc-C-----CCCHHHHHHHHH
Q 002560 817 LKEKNLMKSVSPSACVPQILCTCAD-------------SMHAGLLLNTYLACPLASI--LH-T-----PLDEQSARFCAA 875 (908)
Q Consensus 817 ~~E~~il~~l~~~~~i~~~~~~~~~-------------~~~~~iv~e~~~gg~L~~~--l~-~-----~l~~~~~~~~~~ 875 (908)
.+|..+.... .|+.++...|.+ ....+|+|||+.|+++.++ +. . .+.+..+..++.
T Consensus 198 ~~ElD~~~Ea---~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 198 HDELDLMREA---ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFT 274 (537)
T ss_pred HHhhCHHHHH---HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 4444443332 122222222222 3345799999999999874 32 2 244555555555
Q ss_pred HHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 876 SVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 876 qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
|++ ..|++|+|+||.||+++.+|
T Consensus 275 Qif-------~~GffHaDpHPGNIlv~~~g 297 (537)
T PRK04750 275 QVF-------RDGFFHADMHPGNIFVSYDP 297 (537)
T ss_pred HHH-------hCCeeeCCCChHHeEEecCC
Confidence 554 58999999999999999887
No 475
>KOG2968 consensus Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains [General function prediction only]
Probab=98.95 E-value=1e-08 Score=117.35 Aligned_cols=225 Identities=18% Similarity=0.198 Sum_probs=162.3
Q ss_pred HhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCcchhh-hh---hcCCC---c
Q 002560 492 LLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSSFGEL-AL---MYNKP---L 564 (908)
Q Consensus 492 l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~fGe~-sl---l~~~~---r 564 (908)
++++++...+..|++|++.|++.+.+|++.+|.+.|+..+.+|++...+.+ .+|+.|-.+ ++ +.+.| +
T Consensus 111 L~rh~~t~~l~~Gd~i~~~~~~dd~i~vv~sg~l~v~~~~~~g~~~llk~V-----~~G~~~tSllSiLd~l~~~ps~~~ 185 (1158)
T KOG2968|consen 111 LDRHIETLSLDAGDYIFKPGESDDSIYVVISGELTVHIRNGDGKEYLLKTV-----PPGGSFTSLLSILDSLPGFPSLSR 185 (1158)
T ss_pred echhhhhhcccCCceeccCCCCCceEEEEeccceEEEecCCCCceeeEeec-----cCCCchHhHHHHHHhccCCCcccc
Confidence 347788889999999999999999999999999999999999998776666 788776544 33 33334 5
Q ss_pred eeEEEEccceEEEEEeHHHHHHHHhhhhhhHHH-----H------------------HHhhhchhhccCCH---------
Q 002560 565 QASVRAVTNGMLWALKREDFRGILMSEFSNLSS-----L------------------KLLRSVDLLSRLTI--------- 612 (908)
Q Consensus 565 ~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~~~~-----~------------------~~l~~~~~l~~l~~--------- 612 (908)
...++|.++|.+..++...|.....++|..... + +.+..+..++.++.
T Consensus 186 ~i~akA~t~~tv~~~p~~sF~~~~~k~P~s~iriiQvvmTRLq~vTf~t~~~YLGL~~el~~~e~~~~l~~~~g~~~~~~ 265 (1158)
T KOG2968|consen 186 TIAAKAATDCTVARIPYTSFRESFHKNPESSIRIIQVVMTRLQRVTLTTLHNYLGLSNELMSIERRKRLDSSEGSTYGNR 265 (1158)
T ss_pred eeeeeeecCceEEEeccchhhhhhccChHHHHHHHHHHHHHHHHhhHHHHHhhcCcchhhhhhhhhccccccccccccCc
Confidence 678899999999999999999999888853210 0 11110000000000
Q ss_pred --------------------------------------------------------------HHHHH---------HHHh
Q 002560 613 --------------------------------------------------------------LQLSH---------LADT 621 (908)
Q Consensus 613 --------------------------------------------------------------~~~~~---------l~~~ 621 (908)
.+... ....
T Consensus 266 ~~~g~s~~~lq~~~~~~~~~~s~~v~~~~~~~n~~dlls~~~~gt~~~~~sv~~l~~~~~~~~~~~~~~s~~~ls~~~t~ 345 (1158)
T KOG2968|consen 266 ATIGASSSSLQLLVEIPYSEHSRSVKEGSKLFNAGDLLSDSTRGTRKLFASVHGLLIDALLVRDNIQQGSFSMLSKTGTS 345 (1158)
T ss_pred cccCCCCcccccccccccccccccccccccccCCcccccccccCccccccccccccccccchhhhhhhcccccccccCcc
Confidence 00000 0000
Q ss_pred ccc----------------------------------------cccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccc
Q 002560 622 LSE----------------------------------------VSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLS 661 (908)
Q Consensus 622 l~~----------------------------------------~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~ 661 (908)
+.. ..-+...+|.++|+....+|+|..|...++......
T Consensus 346 i~~~~~~~~~~~~~~e~~~~~~~~v~~l~~~l~~~~~~si~ll~~~keitiiv~q~a~~~gl~~ii~g~l~v~~sm~~~- 424 (1158)
T KOG2968|consen 346 IHLEIFEGEHKLVEKEGRKISSDGVDALDLFLGLSNEDSIVLLELEKEITIIVEQGARDVGLYYIIKGSLSVYQSMYDV- 424 (1158)
T ss_pred chhhccCCcccccccccchhhhhhHHHHHHHhhhcccchhhhhccccceEEEEecccccceeeEEeecceeeeehhccc-
Confidence 000 111334567899999999999999999776554311
Q ss_pred cccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccccc
Q 002560 662 NANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKI 736 (908)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~ 736 (908)
+. ......+.+...++|++||.+++|++++.-++++|.+|+.++.|++.+|.+++-..+.+
T Consensus 425 --------s~------~~~~~~~~~f~v~pG~ivgyla~lt~e~S~~tirArsdt~v~~isrs~l~~~~~~~p~I 485 (1158)
T KOG2968|consen 425 --------SG------NLVLAGMLLFVVGPGEIVGYLAILTNEPSFITIRARSDTRVLFISRSDLERFLDAEPLI 485 (1158)
T ss_pred --------cc------ccccccceEEEecCCceechhhhhcCCcceEEEEEecceEEEEeeHHHHHHHHHhCceE
Confidence 00 12234567888999999999999999999999999999999999999999999887743
No 476
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.92 E-value=5.4e-10 Score=131.45 Aligned_cols=135 Identities=15% Similarity=0.097 Sum_probs=105.0
Q ss_pred EEEEEecCCCeEEEEEEEECCCCceEEEeeechh---hhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 772 EWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQ---KVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 772 ~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~---~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
.....+|.|++|.|+.+......+.++.|..... ..........+..|..+-..+. ||+++.....+.+....+-.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~-h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLS-HPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeeccccc-CCchhhhHHHHhhcccchhh
Confidence 3467899999998888888776666666655421 1111111222666777777774 99987777766666555555
Q ss_pred EecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 849 LNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 849 ~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
||||++ +|+.++. +.+....+..++.|++.|++|||+.||.|||+||+|+|+..+|.+|
T Consensus 400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lk 460 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILK 460 (601)
T ss_pred hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceE
Confidence 999999 9999998 3899999999999999999999999999999999999999998765
No 477
>PRK11161 fumarate/nitrate reduction transcriptional regulator; Provisional
Probab=98.91 E-value=3.2e-09 Score=111.73 Aligned_cols=115 Identities=17% Similarity=0.238 Sum_probs=97.5
Q ss_pred hhchhhccCCHHHHHHHHHhccc-cccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCC
Q 002560 602 RSVDLLSRLTILQLSHLADTLSE-VSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQ 680 (908)
Q Consensus 602 ~~~~~l~~l~~~~~~~l~~~l~~-~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (908)
++...+-.++.+++..|...... ..|++|++|+++||+.+++|+|.+|.|++++... +
T Consensus 16 ~~~~~~~~l~~~~l~~L~~~~~~~~~~~kge~l~~~Gd~~~~ly~v~~G~v~~~~~~~---------------------~ 74 (235)
T PRK11161 16 SQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITE---------------------Q 74 (235)
T ss_pred cccccccCCCHHHHHHHHHhhhhceeecCCCEeECCCCCcceEEEEeeceEEEEEECC---------------------C
Confidence 34445557999999999998864 6799999999999999999999999999987654 4
Q ss_pred ccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCccccccc
Q 002560 681 SSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 681 ~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
+++..+..+.+|++||+.+++.. ....+++|.++++++.|+++.|.+++...+.+..
T Consensus 75 G~e~i~~~~~~gd~~g~~~~~~~-~~~~~~~a~~~~~i~~ip~~~f~~l~~~~p~~~~ 131 (235)
T PRK11161 75 GDEQITGFHLAGDLVGFDAIGSG-QHPSFAQALETSMVCEIPFETLDDLSGKMPKLRQ 131 (235)
T ss_pred CCEEEEEeccCCceeccccccCC-CCcceEEEeccEEEEEEEHHHHHHHHHHChHHHH
Confidence 66778889999999999776544 4556899999999999999999999988877644
No 478
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.89 E-value=4.7e-09 Score=104.29 Aligned_cols=116 Identities=12% Similarity=0.033 Sum_probs=86.1
Q ss_pred EEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEEecCC
Q 002560 774 RKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLLNTYL 853 (908)
Q Consensus 774 ~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~e~~~ 853 (908)
++.|+.|.++.||+++.. ++.|++|+...... .......|..+++.+.+...+++++..... ..++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEecC
Confidence 467899999999999874 77899998754321 112356788888888544556677665432 3579999999
Q ss_pred CCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCc-----EecCCCCCcEEEcC
Q 002560 854 ACPLASILHTPLDEQSARFCAASVVAALEDLHKRGV-----LYRGVSPDVLMLDK 903 (908)
Q Consensus 854 gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gI-----iHrDIKp~NILi~~ 903 (908)
|.++... ......++.+++.+|..||+.++ +|+|++|.|||++.
T Consensus 75 G~~l~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~ 123 (170)
T cd05151 75 GSELLTE------DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDD 123 (170)
T ss_pred CCccccc------cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEEC
Confidence 9887643 11123457899999999999985 99999999999983
No 479
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=98.89 E-value=6.6e-09 Score=109.79 Aligned_cols=137 Identities=13% Similarity=0.090 Sum_probs=89.1
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCC---------CCccceeeee--
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSP---------SACVPQILCT-- 838 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~---------~~~i~~~~~~-- 838 (908)
.+...+.||.|+++.||.|++..|++.+|+|++...........+.+.+|.-....+.+ |-.++-.++.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 56778999999999999999999999999999876553344455666666544433221 1111111111
Q ss_pred -------eccC---C-----eEEEEEecCCCCcHHHHHc-----CCC---CHHHH-HHHHHHHHHHHHHHHhCCcEecCC
Q 002560 839 -------CADS---M-----HAGLLLNTYLACPLASILH-----TPL---DEQSA-RFCAASVVAALEDLHKRGVLYRGV 894 (908)
Q Consensus 839 -------~~~~---~-----~~~iv~e~~~gg~L~~~l~-----~~l---~~~~~-~~~~~qi~~aL~~LH~~gIiHrDI 894 (908)
+... . +.+++|+-+ -++|.+++. ... ....+ ..+..|++..+.+||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 1111 1 346778877 468888765 222 12223 344589999999999999999999
Q ss_pred CCCcEEEcCCCcc
Q 002560 895 SPDVLMLDKSGHL 907 (908)
Q Consensus 895 Kp~NILi~~~g~v 907 (908)
||+|++++.+|.+
T Consensus 172 ~~~nfll~~~G~v 184 (288)
T PF14531_consen 172 KPENFLLDQDGGV 184 (288)
T ss_dssp SGGGEEE-TTS-E
T ss_pred ceeeEEEcCCCCE
Confidence 9999999999975
No 480
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.87 E-value=5.2e-09 Score=119.44 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=84.8
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhcc-------------------------------ch------HHHHH
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCL-------------------------------GK------EVQVL 817 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~-------------------------------~~------~~~~~ 817 (908)
+.||.|++|.||+++.+ +|+.||||+.+......- .. +-.+.
T Consensus 123 ~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 56999999999999875 789999999754310000 00 00134
Q ss_pred HHHHHHHhc----CCCCcc--ceeeeeeccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHH-HHHHHHhC
Q 002560 818 KEKNLMKSV----SPSACV--PQILCTCADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVA-ALEDLHKR 887 (908)
Q Consensus 818 ~E~~il~~l----~~~~~i--~~~~~~~~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~-aL~~LH~~ 887 (908)
+|...+..+ .+++++ +++|..+ ....+++|||++|.+|.++.. ...+ ...++..++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~--~~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDR--TSERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhh--cCCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhC
Confidence 455444444 234433 3444322 345689999999999988765 1222 2345555555 46789999
Q ss_pred CcEecCCCCCcEEEcCCCcc
Q 002560 888 GVLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 888 gIiHrDIKp~NILi~~~g~v 907 (908)
|++|+|+||.|||++.+|.+
T Consensus 277 g~~H~D~hPgNilv~~~g~i 296 (437)
T TIGR01982 277 GFFHADLHPGNIFVLKDGKI 296 (437)
T ss_pred CceeCCCCcccEEECCCCcE
Confidence 99999999999999988865
No 481
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.87 E-value=2.7e-09 Score=116.70 Aligned_cols=114 Identities=23% Similarity=0.298 Sum_probs=104.4
Q ss_pred HHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCC
Q 002560 599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG 678 (908)
Q Consensus 599 ~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (908)
..|.++.+|+..+...+.-+...|..+.|-+|+.|.+.|+.+...|||+-|+|.|.-..+
T Consensus 527 ~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGGp~-------------------- 586 (815)
T KOG0499|consen 527 SILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGGPD-------------------- 586 (815)
T ss_pred hhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEecCCC--------------------
Confidence 678899999999999999999999999999999999999999999999999999965433
Q ss_pred CCccceeeeEcCCCCeechhhhcc---cCcccceEeecCceEEEEecccccccccCcccc
Q 002560 679 TQSSKELSVEKSEGSYFGEWTLLG---EHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTK 735 (908)
Q Consensus 679 ~~~~~~~v~~l~~G~~FGe~all~---~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~ 735 (908)
..+.+++|.+|.+|||++||. ++.|+|+|+|.+=+.+++++|+++++++-.+++
T Consensus 587 ---~~~Vl~tL~~GsVFGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~YP~ 643 (815)
T KOG0499|consen 587 ---GTKVLVTLKAGSVFGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHYPD 643 (815)
T ss_pred ---CCEEEEEecccceeeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhCcc
Confidence 356899999999999999984 488999999999999999999999999988776
No 482
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.85 E-value=1.3e-09 Score=135.23 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=62.7
Q ss_pred Cccceeeeee-------ccCCeEEEEEecCCCCcHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcE
Q 002560 830 ACVPQILCTC-------ADSMHAGLLLNTYLACPLASILH---TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVL 899 (908)
Q Consensus 830 ~~i~~~~~~~-------~~~~~~~iv~e~~~gg~L~~~l~---~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NI 899 (908)
+||.+++++| .....++++||++ +++|.++|. ..+++..++.|+.||+.||.|||++||+||||||+||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~Ni 111 (793)
T PLN00181 33 DYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCF 111 (793)
T ss_pred HHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhE
Confidence 4555555555 2234577788887 679999996 4599999999999999999999999999999999999
Q ss_pred EEcCCCcc
Q 002560 900 MLDKSGHL 907 (908)
Q Consensus 900 Li~~~g~v 907 (908)
||+..|.+
T Consensus 112 Ll~~~~~~ 119 (793)
T PLN00181 112 VMSSFNHV 119 (793)
T ss_pred EEcccCcE
Confidence 99765543
No 483
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.82 E-value=4.6e-09 Score=110.44 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=108.6
Q ss_pred ccceEEEEEecCCCeEEEEEEEECCCC-----ceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeee-cc
Q 002560 768 LTDMEWRKCLYSTDCSEIGLVLLRDSE-----NFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTC-AD 841 (908)
Q Consensus 768 ~~~~~~~~~LG~G~~g~V~~~~~~~~~-----~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~-~~ 841 (908)
-..++....+.+|.||.||.+.+.+.. +.+-+|.++... ..-+...++.|...+..+. |||+..+.+.. .+
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A--S~iQv~~~L~es~lly~~s-H~nll~V~~V~ie~ 359 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA--SQIQVNLLLQESMLLYGAS-HPNLLSVLGVSIED 359 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc--cHHHHHHHHHHHHHHhcCc-CCCccceeEEEeec
Confidence 344777788999999999999765432 233445443322 2335667889999999985 99999988765 45
Q ss_pred CCeEEEEEecCCCCcHHHHHc----------CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 842 SMHAGLLLNTYLACPLASILH----------TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 842 ~~~~~iv~e~~~gg~L~~~l~----------~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
....++++.+..-|+|..+|. +.++..+...++.|+..|+.|||++|+||.||-..|++||+.-++|
T Consensus 360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVk 436 (563)
T KOG1024|consen 360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVK 436 (563)
T ss_pred cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEE
Confidence 567788889998899999986 3467778888999999999999999999999999999999876554
No 484
>COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]
Probab=98.79 E-value=1.1e-08 Score=112.84 Aligned_cols=114 Identities=24% Similarity=0.350 Sum_probs=105.5
Q ss_pred HHhhhchhhccCCHHHHHHHHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCC
Q 002560 599 KLLRSVDLLSRLTILQLSHLADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDG 678 (908)
Q Consensus 599 ~~l~~~~~l~~l~~~~~~~l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~ 678 (908)
.|+.+.|.|..|+++++..|..++.-..|.+|++|+..|.+..++|+|.+|.|.+.....
T Consensus 7 ~Fl~~~pPF~~L~~eel~~L~~~l~v~yy~kge~ii~~~~p~~~l~vi~kG~vev~~~~g-------------------- 66 (610)
T COG2905 7 QFLQQHPPFSQLPAEELEQLMGALEVKYYRKGEIIIYAGSPVHYLYVIRKGVVEVRSDGG-------------------- 66 (610)
T ss_pred HHHhcCCCcccCCHHHHHHHHhhhccccccCCCeeecCCCCcceeEEEEeceeeEEcCCC--------------------
Confidence 689999999999999999999999999999999999999999999999999999876543
Q ss_pred CCccceeeeEcCCCCeechhhhcccCcccceEeecCceEEEEecccccccccCcccccc
Q 002560 679 TQSSKELSVEKSEGSYFGEWTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKIS 737 (908)
Q Consensus 679 ~~~~~~~v~~l~~G~~FGe~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~ 737 (908)
..+..+..|+.||-.+|++..+-...++|.+|+.||.|+++.|.++.+..+.+.
T Consensus 67 -----~v~~~~~~gdlFg~~~l~~~~~~~~~~~aeedsl~y~lp~s~F~ql~~~n~~f~ 120 (610)
T COG2905 67 -----EVLDRLAAGDLFGFSSLFTELNKQRYMAAEEDSLCYLLPKSVFMQLMEENPEFA 120 (610)
T ss_pred -----eeeeeeccCccccchhhcccCCCcceeEeeccceEEecCHHHHHHHHHhCcHHH
Confidence 278999999999999999999999999999999999999999999988776643
No 485
>PRK13918 CRP/FNR family transcriptional regulator; Provisional
Probab=98.79 E-value=1.7e-08 Score=103.53 Aligned_cols=84 Identities=24% Similarity=0.287 Sum_probs=74.8
Q ss_pred hccccccCCCCEEEEcCC--CCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechh
Q 002560 621 TLSEVSFSAGQTIVNMNE--GVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEW 698 (908)
Q Consensus 621 ~l~~~~~~~G~~Ii~qG~--~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~ 698 (908)
.++...|++|++|+++|+ +.+.+|+|++|.|++++... ++++..+..+.+|++||+.
T Consensus 5 ~~~~~~~~kg~~l~~~Gd~~~~~~~y~I~~G~vr~~~~~~---------------------~G~e~~l~~~~~Gd~~G~~ 63 (202)
T PRK13918 5 VVDTVTYRPGAVILYPGVPGPSDMLYRVRSGLVRLHTVDD---------------------EGNALTLRYVRPGEYFGEE 63 (202)
T ss_pred ccceeEecCCCEEEcCCCCCCCCeEEEEEeeEEEEEEECC---------------------CCCEEEEEEecCCCeechH
Confidence 356678999999999999 77999999999999988654 5778899999999999997
Q ss_pred hhcccCcccceEeecCceEEEEeccccc
Q 002560 699 TLLGEHMGSLTAVAVDDVVCAILTKEKF 726 (908)
Q Consensus 699 all~~~~r~~tv~a~~~~~~~~i~~~~f 726 (908)
++. ..++++++.|.++++++.|++..|
T Consensus 64 ~~~-~~~~~~~~~A~~~~~v~~i~~~~~ 90 (202)
T PRK13918 64 ALA-GAERAYFAEAVTDSRIDVLNPALM 90 (202)
T ss_pred Hhc-CCCCCceEEEcCceEEEEEEHHHc
Confidence 665 578899999999999999999987
No 486
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.78 E-value=4.7e-08 Score=98.02 Aligned_cols=125 Identities=12% Similarity=0.108 Sum_probs=89.5
Q ss_pred EEecCCCeEEEEEEEECC------CCceEEEeeechhhh--------h-----------ccchHHHH----HHHHHHHHh
Q 002560 775 KCLYSTDCSEIGLVLLRD------SENFLSLKRFSKQKV--------K-----------CLGKEVQV----LKEKNLMKS 825 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~------~~~~~alK~~~~~~~--------~-----------~~~~~~~~----~~E~~il~~ 825 (908)
..||.|.=+.||.+.... .+..+|+|+.+.... . +......+ .+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 568999999999997643 357999999753211 0 01112223 379999998
Q ss_pred cCC-CCccceeeeeeccCCeEEEEEecCCCCcHH-HHHc-CCCCHHHHHHHHHHHHHHHHHH-HhCCcEecCCCCCcEEE
Q 002560 826 VSP-SACVPQILCTCADSMHAGLLLNTYLACPLA-SILH-TPLDEQSARFCAASVVAALEDL-HKRGVLYRGVSPDVLML 901 (908)
Q Consensus 826 l~~-~~~i~~~~~~~~~~~~~~iv~e~~~gg~L~-~~l~-~~l~~~~~~~~~~qi~~aL~~L-H~~gIiHrDIKp~NILi 901 (908)
+.. .-.+|..+.. ...+|||||+.+..+. ..+. ..+++.....+..+++.+|..| |..||+|+||+|.|||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~ 158 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLW 158 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 842 3567777764 4568999999664332 2233 3456667778889999999998 89999999999999999
Q ss_pred cC
Q 002560 902 DK 903 (908)
Q Consensus 902 ~~ 903 (908)
++
T Consensus 159 ~~ 160 (197)
T cd05146 159 HD 160 (197)
T ss_pred EC
Confidence 74
No 487
>KOG0499 consensus Cyclic nucleotide-gated cation channel CNCG4 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.77 E-value=2.3e-08 Score=109.59 Aligned_cols=115 Identities=26% Similarity=0.355 Sum_probs=99.8
Q ss_pred HHHhcCccccCCCHHHHHHHhhcceEEEecCCCEEEcCCCcCCeEEEEEEeEEEEEEeccccCcccceEEEeeecCCCCc
Q 002560 473 RALHDHFLFRKLTDSQCHVLLDCMQRVEVQAGDIVVKQGGEGDCFYVVGSGEFEVMATQEEKNGEVPRVLQRYTAEKLSS 552 (908)
Q Consensus 473 ~~l~~~~~f~~L~~~~l~~l~~~~~~~~~~~ge~I~~~Gd~~~~~yiI~~G~v~v~~~~~~g~~~~~~~~~~~~~~~G~~ 552 (908)
..|+++.+|++.+...+..++-.+..+.|-+|+.|++.|+.+..||||..|.|.|.-. ++|. .++ .++..|.+
T Consensus 527 ~~lSKVqLFq~Cdr~mirDmllrLRsV~yLPgDfVCkKGeiGkEMYIIk~GqvQVlGG-p~~~----~Vl--~tL~~GsV 599 (815)
T KOG0499|consen 527 SILSKVQLFQGCDRQMIRDMLLRLRSVLYLPGDFVCKKGEIGKEMYIIKHGQVQVLGG-PDGT----KVL--VTLKAGSV 599 (815)
T ss_pred hhhhHHHHhhhhHHHHHHHHHHHhhceeecCCceeeecccccceeEEeecceEEEecC-CCCC----EEE--EEecccce
Confidence 4688999999999999999999999999999999999999999999999999999733 2332 222 24477999
Q ss_pred chhhhhh---cCCCceeEEEEccceEEEEEeHHHHHHHHhhhhhh
Q 002560 553 FGELALM---YNKPLQASVRAVTNGMLWALKREDFRGILMSEFSN 594 (908)
Q Consensus 553 fGe~sll---~~~~r~~tv~A~~~~~l~~i~~~~f~~ll~~~~~~ 594 (908)
|||++|+ .+..|+|+|+|..-|.|++++++++++++.-.|..
T Consensus 600 FGEISLLaigG~nRRTAnV~a~Gf~nLfvL~KkdLneil~~YP~s 644 (815)
T KOG0499|consen 600 FGEISLLAIGGGNRRTANVVAHGFANLFVLDKKDLNEILVHYPDS 644 (815)
T ss_pred eeeeeeeeecCCCccchhhhhcccceeeEecHhHHHHHHHhCccH
Confidence 9999997 34789999999999999999999999999887753
No 488
>TIGR03697 NtcA_cyano global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C.
Probab=98.73 E-value=1.4e-08 Score=103.34 Aligned_cols=88 Identities=22% Similarity=0.266 Sum_probs=78.1
Q ss_pred CCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeechhhhcccCc--cc
Q 002560 630 GQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGEWTLLGEHM--GS 707 (908)
Q Consensus 630 G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe~all~~~~--r~ 707 (908)
|+.|+++|++.+.+|+|++|.|+++.... ++++..+..+++|++||+.+++.+.+ +.
T Consensus 1 g~~l~~~g~~~~~~~~i~~G~v~~~~~~~---------------------~G~e~~l~~~~~g~~~G~~~~~~~~~~~~~ 59 (193)
T TIGR03697 1 GKTIFFPGDPAEKVYFLRRGAVKLSRVYE---------------------SGEEITVALLRENSVFGVLSLITGHRSDRF 59 (193)
T ss_pred CCceecCCCCCCcEEEEEecEEEEEEeCC---------------------CCcEeeeEEccCCCEeeeeeeccCCCCccc
Confidence 78999999999999999999999987654 46678899999999999999998764 45
Q ss_pred ceEeecCceEEEEecccccccccCccccccc
Q 002560 708 LTAVAVDDVVCAILTKEKFDLVVGPLTKISH 738 (908)
Q Consensus 708 ~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~ 738 (908)
++++|.++++++.|++++|.+++...+.+..
T Consensus 60 ~~~~A~~~~~v~~i~~~~~~~l~~~~p~l~~ 90 (193)
T TIGR03697 60 YHAVAFTRVELLAVPIEQVEKAIEEDPDLSM 90 (193)
T ss_pred eEEEEecceEEEEeeHHHHHHHHHHChHHHH
Confidence 7899999999999999999999988777654
No 489
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=98.65 E-value=8.4e-09 Score=121.47 Aligned_cols=130 Identities=19% Similarity=0.154 Sum_probs=103.5
Q ss_pred ceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhh-hhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEE
Q 002560 770 DMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQK-VKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLL 848 (908)
Q Consensus 770 ~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~-~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv 848 (908)
+|...+.||++.|=+|.++++.+ | .+++|++-+.. ........+.+.|+. .... .+||++.+-.+.......|||
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~e-G-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~-~~pn~lPfqk~~~t~kAAylv 99 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDRE-G-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALM-KAPNCLPFQKVLVTDKAAYLV 99 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCC-c-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhh-cCCcccchHHHHHhhHHHHHH
Confidence 78999999999999999998753 3 49999987654 223333344444555 3333 599999988887888888999
Q ss_pred EecCCCCcHHHHHc-CC-CCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCC
Q 002560 849 LNTYLACPLASILH-TP-LDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKS 904 (908)
Q Consensus 849 ~e~~~gg~L~~~l~-~~-l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~ 904 (908)
-+|.. .+|++.|. ++ +..-+.+.|+.|++.||.-+|..||+|+|||.|||||+.=
T Consensus 100 Rqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW 156 (1431)
T KOG1240|consen 100 RQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW 156 (1431)
T ss_pred HHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee
Confidence 99984 59999998 44 6777888899999999999999999999999999999863
No 490
>PRK09391 fixK transcriptional regulator FixK; Provisional
Probab=98.65 E-value=4.2e-08 Score=102.59 Aligned_cols=98 Identities=17% Similarity=0.243 Sum_probs=83.8
Q ss_pred HHHhccccccCCCCEEEEcCCCCCeEEEEEecEEEEEEcccccccccccccccCCccccCCCCccceeeeEcCCCCeech
Q 002560 618 LADTLSEVSFSAGQTIVNMNEGVAALYIIQRGQVRITFDADLLSNANVCSLKSDLHVEDDGTQSSKELSVEKSEGSYFGE 697 (908)
Q Consensus 618 l~~~l~~~~~~~G~~Ii~qG~~~d~~YiI~~G~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~G~~FGe 697 (908)
+......+.|++|++|+.+|+.++++|+|++|.|+++.... ++++..+..+.+|++||+
T Consensus 34 ~~~~~~~~~~~kge~l~~~Gd~~~~ly~I~~G~vkl~~~~~---------------------~G~e~i~~~~~~Gd~fG~ 92 (230)
T PRK09391 34 AGLVASEFSYKKGEEIYGEGEPADYVYQVESGAVRTYRLLS---------------------DGRRQIGAFHLPGDVFGL 92 (230)
T ss_pred ccceeeeEEECCCCEEECCCCCCCeEEEEEeCEEEEEEECC---------------------CCcEEEEEEecCCceecc
Confidence 34455678999999999999999999999999999987654 456778888999999996
Q ss_pred hhhcccCcccceEeecCceEEEEecccccccccCcccccccc
Q 002560 698 WTLLGEHMGSLTAVAVDDVVCAILTKEKFDLVVGPLTKISHD 739 (908)
Q Consensus 698 ~all~~~~r~~tv~a~~~~~~~~i~~~~f~~llg~~~~~~~~ 739 (908)
. ...++.+++.|+++++++.|+++.|.+++...+.+...
T Consensus 93 ~---~~~~~~~~~~A~~ds~v~~i~~~~f~~l~~~~p~l~~~ 131 (230)
T PRK09391 93 E---SGSTHRFTAEAIVDTTVRLIKRRSLEQAAATDVDVARA 131 (230)
T ss_pred c---CCCcCCeEEEEcCceEEEEEEHHHHHHHHhhChHHHHH
Confidence 4 45678899999999999999999999999887776553
No 491
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.54 E-value=8e-07 Score=85.42 Aligned_cols=131 Identities=8% Similarity=0.085 Sum_probs=93.1
Q ss_pred EEEEecCCCeEEEEEEEECCCCceEEEeee-----chhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEE
Q 002560 773 WRKCLYSTDCSEIGLVLLRDSENFLSLKRF-----SKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGL 847 (908)
Q Consensus 773 ~~~~LG~G~~g~V~~~~~~~~~~~~alK~~-----~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~i 847 (908)
.+..+-+|+=+.|+++.+ .|+.+.+|.= +...+...-...+..+|.++|.++. --.|+-..-+|.|...-+|
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~-~~GI~~P~l~~~D~~~~~i 87 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCR-ALGIPAPRLIFIDTYGGQI 87 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHH-HhCCCCceEEEEecCCCeE
Confidence 467788999999999877 5677777642 2222222233466788999998873 3334333335566677789
Q ss_pred EEecCCC-CcHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCc
Q 002560 848 LLNTYLA-CPLASILH----TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGH 906 (908)
Q Consensus 848 v~e~~~g-g~L~~~l~----~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~ 906 (908)
+|||++| .++.+++. ..........++..|-..+.-||.++|||+||..+|||+..+|.
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~ 151 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGN 151 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCC
Confidence 9999987 46777775 22333333678888999999999999999999999999987763
No 492
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.52 E-value=5.2e-07 Score=93.72 Aligned_cols=109 Identities=18% Similarity=0.209 Sum_probs=80.1
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCC-CccceeeeeeccC---CeEEEEEe
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPS-ACVPQILCTCADS---MHAGLLLN 850 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~-~~i~~~~~~~~~~---~~~~iv~e 850 (908)
+.|+.|.++.||++.... |+.+++|+....... .....+..|..+++.+..+ ..+++++.+.... +..|+|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998753 678999987654321 1234678899999998542 3467777766554 36789999
Q ss_pred cCCCCcHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 002560 851 TYLACPLASILH-TPLDEQSARFCAASVVAALEDLHK 886 (908)
Q Consensus 851 ~~~gg~L~~~l~-~~l~~~~~~~~~~qi~~aL~~LH~ 886 (908)
|++|.++...+. ..+++.....++.+++.+|..||+
T Consensus 81 ~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 117 (223)
T cd05154 81 RVDGRVLRDRLLRPELSPEERRALARALADTLAALHS 117 (223)
T ss_pred EeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 999998877654 456777777777788888877773
No 493
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.49 E-value=9.3e-08 Score=112.85 Aligned_cols=105 Identities=25% Similarity=0.351 Sum_probs=80.2
Q ss_pred cccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 763 LAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 763 ~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
.....-.+|+.++.+..|+||.||+++++.+.+.||+|+ ++..+.- + .|+... .+|+++
T Consensus 77 ~~~p~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~lil--------R--nilt~a-~npfvv--------- 135 (1205)
T KOG0606|consen 77 RRAPSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNLIL--------R--NILTFA-GNPFVV--------- 135 (1205)
T ss_pred ccCCCccccceeEeeccCCCCceeeeeccccccchhhcc-cccchhh--------h--cccccc-CCccee---------
Confidence 444567899999999999999999999999999999964 4433211 1 133333 466665
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCCccC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSGHLQ 908 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g~vK 908 (908)
|+-...++ ++++... +.+++|||+.||+|||+||+|++|..-|++|
T Consensus 136 ------------gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiK 183 (1205)
T KOG0606|consen 136 ------------GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIK 183 (1205)
T ss_pred ------------chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeeccccc
Confidence 55555555 4555443 7899999999999999999999999999986
No 494
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.37 E-value=1.9e-06 Score=83.50 Aligned_cols=123 Identities=14% Similarity=0.078 Sum_probs=84.9
Q ss_pred EEecCCCeEEEEEEEECCCCceEEEeee-ch----hhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeEEEEE
Q 002560 775 KCLYSTDCSEIGLVLLRDSENFLSLKRF-SK----QKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHAGLLL 849 (908)
Q Consensus 775 ~~LG~G~~g~V~~~~~~~~~~~~alK~~-~~----~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~~iv~ 849 (908)
..+++|+=+.++.+.+. +..+++|.= +| ..+...-...+..+|.+++..+. ...|+-.+-+..+.+...|+|
T Consensus 2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~-~~GV~~P~v~dvD~~~~~I~m 78 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAR-EAGVPVPIVYDVDPDNGLIVM 78 (204)
T ss_pred chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHH-HcCCCCCeEEEEcCCCCEEEE
Confidence 35778888899888663 334555542 22 22222223456788999999874 334444444455667778999
Q ss_pred ecCCCCcHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 850 NTYLACPLASILHTPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 850 e~~~gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
||++|..|.+.+... . -.++..+-.-+.-||.+||+|+||.++||++..++
T Consensus 79 e~I~G~~lkd~l~~~-~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~ 129 (204)
T COG3642 79 EYIEGELLKDALEEA-R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR 129 (204)
T ss_pred EEeCChhHHHHHHhc-c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc
Confidence 999999999888733 2 34555666667779999999999999999998764
No 495
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.32 E-value=8e-08 Score=113.29 Aligned_cols=140 Identities=20% Similarity=0.182 Sum_probs=117.5
Q ss_pred cccceEEEEEecCCCeEEEEEEEECCC-CceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccCCeE
Q 002560 767 SLTDMEWRKCLYSTDCSEIGLVLLRDS-ENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADSMHA 845 (908)
Q Consensus 767 ~~~~~~~~~~LG~G~~g~V~~~~~~~~-~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~~~~ 845 (908)
....|.+.+.||+|+|+.|-++..... ...+|+|.+.... .......++..|..+-..++.|+|++++++......+.
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~ 96 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSY 96 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccc
Confidence 466788889999999999998877544 4467777765543 23334556667888878876799999999999999999
Q ss_pred EEEEecCCCCcHHHHH-c--C-CCCHHHHHHHHHHHHHHHHHHH-hCCcEecCCCCCcEEEcCCC-cc
Q 002560 846 GLLLNTYLACPLASIL-H--T-PLDEQSARFCAASVVAALEDLH-KRGVLYRGVSPDVLMLDKSG-HL 907 (908)
Q Consensus 846 ~iv~e~~~gg~L~~~l-~--~-~l~~~~~~~~~~qi~~aL~~LH-~~gIiHrDIKp~NILi~~~g-~v 907 (908)
++.++|..|++++..+ . . ..+...+..++.|+..++.|+| ..++.||||||+|.+++..| .+
T Consensus 97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l 164 (601)
T KOG0590|consen 97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSAL 164 (601)
T ss_pred ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcc
Confidence 9999999999999999 5 2 6788899999999999999999 99999999999999999988 54
No 496
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.31 E-value=4.6e-07 Score=102.10 Aligned_cols=141 Identities=15% Similarity=0.103 Sum_probs=114.7
Q ss_pred ccccccceEEEEEecCCCeEEEEEEEEC-CCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeeeeeccC
Q 002560 764 AKVSLTDMEWRKCLYSTDCSEIGLVLLR-DSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILCTCADS 842 (908)
Q Consensus 764 ~~~~~~~~~~~~~LG~G~~g~V~~~~~~-~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~~~~~~ 842 (908)
......+|..+..||.|.|+.|+.+... .++..|++|.+.+....... ...-+.|+-+...+..|.+++..+..|...
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~-di~sl~ev~l~~~l~~~~~~~g~~~~W~~~ 338 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFAS-DIFSLGEVILEAILGSHLPSVGKNSSWSQL 338 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHh-hhcchhhhhHhhHhhcccccCCCCCCcccc
Confidence 4556788999999999999999988754 56779999987654433322 223445666666666688898999888888
Q ss_pred CeEEEEEecCCCCcHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcEecCCCCCcEEEcCCC
Q 002560 843 MHAGLLLNTYLACPLASILH--TPLDEQSARFCAASVVAALEDLHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 843 ~~~~iv~e~~~gg~L~~~l~--~~l~~~~~~~~~~qi~~aL~~LH~~gIiHrDIKp~NILi~~~g 905 (908)
...|+-.|||.++++...+. ..+++...+....|++.++.++|++.++|+|+||+||++..+|
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~ 403 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG 403 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch
Confidence 88999999999998776655 6788889999999999999999999999999999999998864
No 497
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.21 E-value=4.5e-07 Score=91.19 Aligned_cols=146 Identities=14% Similarity=0.118 Sum_probs=118.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEEECCCCceEEEeeechhhhhccchHHHHHHHHHHHHhcCCCCccceeee
Q 002560 758 IDISSLAKVSLTDMEWRKCLYSTDCSEIGLVLLRDSENFLSLKRFSKQKVKCLGKEVQVLKEKNLMKSVSPSACVPQILC 837 (908)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~LG~G~~g~V~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~~i~~~~~ 837 (908)
...+.+..+++.++.++.+|.+...|..|++++. |.-++.|++...... ....+.|..|.-.|+.++ ||||+.+++
T Consensus 179 atlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifs-hpnilpvlg 254 (448)
T KOG0195|consen 179 ATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFS-HPNILPVLG 254 (448)
T ss_pred cccccccCcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeec-CCchhhhhh
Confidence 4456677889999999999999999999999885 455667877654432 223445667777777775 999999999
Q ss_pred eeccCCeEEEEEecCCCCcHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhCC--cEecCCCCCcEEEcCCCcc
Q 002560 838 TCADSMHAGLLLNTYLACPLASILHT----PLDEQSARFCAASVVAALEDLHKRG--VLYRGVSPDVLMLDKSGHL 907 (908)
Q Consensus 838 ~~~~~~~~~iv~e~~~gg~L~~~l~~----~l~~~~~~~~~~qi~~aL~~LH~~g--IiHrDIKp~NILi~~~g~v 907 (908)
.+....++.++..|++.|+|+.+|++ -.+..++..++..++.|+.|||+.. |.---|....+|||++-..
T Consensus 255 acnsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedlta 330 (448)
T KOG0195|consen 255 ACNSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTA 330 (448)
T ss_pred hccCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhh
Confidence 99999999999999999999999982 2678899999999999999999975 4444688889999987543
No 498
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.17 E-value=9.8e-06 Score=81.08 Aligned_cols=117 Identities=13% Similarity=0.133 Sum_probs=75.8
Q ss_pred EEEEEEECCCCceEEEeeechhhh-----------------------hccchHHHHHHHHHHHHhcCCC-Cccceeeeee
Q 002560 784 EIGLVLLRDSENFLSLKRFSKQKV-----------------------KCLGKEVQVLKEKNLMKSVSPS-ACVPQILCTC 839 (908)
Q Consensus 784 ~V~~~~~~~~~~~~alK~~~~~~~-----------------------~~~~~~~~~~~E~~il~~l~~~-~~i~~~~~~~ 839 (908)
.||.|... .+..+|+|+.+.... ...-......+|.+.|..+... -++|+++.+.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 37888764 567899998753210 0011234578899999999533 3678877553
Q ss_pred ccCCeEEEEEecCC--CCcHHHHHcCCCCHHHHHHHHHHHHHHHHH-HHhCCcEecCCCCCcEEEcCCC
Q 002560 840 ADSMHAGLLLNTYL--ACPLASILHTPLDEQSARFCAASVVAALED-LHKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 840 ~~~~~~~iv~e~~~--gg~L~~~l~~~l~~~~~~~~~~qi~~aL~~-LH~~gIiHrDIKp~NILi~~~g 905 (908)
..+|||||+. |..+..+....++......++.+++..+.. +|+.||+|+||.+.|||+++++
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~~ 144 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDGK 144 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETTC
T ss_pred ----CCEEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecce
Confidence 2369999998 666665544444455667788888886655 5799999999999999998763
No 499
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.17 E-value=2.3e-05 Score=83.29 Aligned_cols=89 Identities=12% Similarity=0.105 Sum_probs=66.7
Q ss_pred HHHHHHHHHHhcCC-CCccceeeeeecc-----CCeEEEEEecCCCC-cHHHHHc----CCCCHHHHHHHHHHHHHHHHH
Q 002560 815 QVLKEKNLMKSVSP-SACVPQILCTCAD-----SMHAGLLLNTYLAC-PLASILH----TPLDEQSARFCAASVVAALED 883 (908)
Q Consensus 815 ~~~~E~~il~~l~~-~~~i~~~~~~~~~-----~~~~~iv~e~~~gg-~L~~~l~----~~l~~~~~~~~~~qi~~aL~~ 883 (908)
...+|...+..|.. .-.++....+... ....|+|||++++. +|.+++. ...+......++.+++..+.-
T Consensus 74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~ 153 (268)
T PRK15123 74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD 153 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 36678887777621 1222333333322 23578999999886 7988875 345667788999999999999
Q ss_pred HHhCCcEecCCCCCcEEEcC
Q 002560 884 LHKRGVLYRGVSPDVLMLDK 903 (908)
Q Consensus 884 LH~~gIiHrDIKp~NILi~~ 903 (908)
||.+||+|+|++|.|||++.
T Consensus 154 LH~~Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 154 MHAAGINHRDCYICHFLLHL 173 (268)
T ss_pred HHHCcCccCCCChhhEEEec
Confidence 99999999999999999985
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.00 E-value=5.8e-05 Score=77.45 Aligned_cols=93 Identities=14% Similarity=0.240 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHhcCC-CCccceeeeeeccC----CeEEEEEecCCCC-cHHHHHc--CCCCHHHHHHHHHHHHHHHHHH
Q 002560 813 EVQVLKEKNLMKSVSP-SACVPQILCTCADS----MHAGLLLNTYLAC-PLASILH--TPLDEQSARFCAASVVAALEDL 884 (908)
Q Consensus 813 ~~~~~~E~~il~~l~~-~~~i~~~~~~~~~~----~~~~iv~e~~~gg-~L~~~l~--~~l~~~~~~~~~~qi~~aL~~L 884 (908)
.....+|...+..|.. .-.+++.+.+.... ...|+|||++++. +|.+++. ...+......++.++...+.-|
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKL 134 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHH
Confidence 3456777777666621 22344555444332 3458999999884 7999887 3467778889999999999999
Q ss_pred HhCCcEecCCCCCcEEEcCCC
Q 002560 885 HKRGVLYRGVSPDVLMLDKSG 905 (908)
Q Consensus 885 H~~gIiHrDIKp~NILi~~~g 905 (908)
|.+||+|+|++|.|||++.++
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~ 155 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDD 155 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCC
Confidence 999999999999999999875
Done!