Query 002560
Match_columns 908
No_of_seqs 602 out of 4863
Neff 8.7
Searched_HMMs 29240
Date Tue Mar 26 21:56:10 2013
Command hhsearch -i /local_scratch/syshi/lefta3m2/002560.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H2_58-62//hhsearch_pdb/002560hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pnq_A [pyruvate dehydrogenase 1.0 1 1 379.1 20.0 290 59-388 7-456 (467)
2 2i0o_A Ser/Thr phosphatase; be 1.0 1 1 361.8 25.6 259 86-387 14-304 (304)
3 1a6q_A Phosphatase 2C; catalyt 1.0 1 1 360.7 24.3 253 92-391 19-296 (382)
4 2p8e_A PPM1B beta isoform vari 1.0 1 1 360.7 25.0 253 91-390 20-301 (307)
5 2j4o_A Mitogen-activated prote 1.0 1 1 360.3 20.6 263 94-389 26-368 (401)
6 3d8k_A PP2C, protein phosphata 1.0 1 1 359.4 18.6 253 93-390 11-327 (377)
7 3qn1_B Protein phosphatase 2C 1.0 1 1 355.8 24.3 250 96-390 15-331 (337)
8 2i44_A Serine-threonine phosph 1.0 1 1 353.6 27.7 262 93-389 20-323 (324)
9 4da1_A Protein phosphatase 1K, 1.0 1 1 352.3 26.1 252 95-391 122-380 (389)
10 2isn_A NYSGXRC-8828Z, phosphat 1.0 1 1 351.9 27.7 255 88-390 6-336 (364)
No 1
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=1.00 E-value=1 Score=379.14 Aligned_cols=290 Identities=28% Similarity=0.332 Sum_probs=226.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECC
Q ss_conf 45693333432234456544899994288208990289999824667889999888523998558889898389999319
Q 002560 59 SQLNPELGITRLSRVSSQFLPPEGSRTVKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDG 138 (908)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DG 138 (908)
.||+|++...+|+..+.++.+.++.+. ++.....+.|++|. .|..|||++.+.... ..++.|||||||
T Consensus 7 ~~l~~~~~~~~l~~~e~s~~~~~~~g~------~~~~v~~~~s~~g~----~R~~nED~~~v~~~~--~~~~~lfgVfDG 74 (467)
T 2pnq_A 7 FYLTPPQVNSILKANEYSFKVPEFDGK------NVSSILGFDSNRLP----ANAPIEDRRSATTCL--QTRGMLLGVFDG 74 (467)
T ss_dssp --CCHHHHHHHHHHHCEEEECCCCTTT------CCCSEEEEEEEEEC----CSSSCCEEEEEEEES--SSSCEEEEEEEE
T ss_pred CCCCHHHHHHHHHCCCEEEEECCCCCC------CCCCEEEEEEECCC----CCCCCCCCEEEEECC--CCCCEEEEEECC
T ss_conf 467999999997626806873378987------66646999940137----899888710665314--898279999789
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCC------------------------------C-------------------------
Q ss_conf 993717999999999999998128------------------------------8-------------------------
Q 002560 139 HGEFGAQCSQFVKRKLCENLLRNN------------------------------K------------------------- 163 (908)
Q Consensus 139 hGg~G~~as~~~~~~l~~~l~~~~------------------------------~------------------------- 163 (908)
|| |+.||+++++.+...+.... .
T Consensus 75 HG--G~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 152 (467)
T 2pnq_A 75 HA--GCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLN 152 (467)
T ss_dssp ES--SSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC-
T ss_pred CC--CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCC
T ss_conf 99--7799999999999999986301124444443220134433210123454321001110000000012222201245
Q ss_pred ----CCHHHHHHHHHHHHHHHHHHHHCCC-------------CCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEEC-CC
Q ss_conf ----5035999999999999799874238-------------97888640899999799799999046629999871-98
Q 002560 164 ----FHEDAVDACHSSYLTTNSQLHADVL-------------DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERR-GK 225 (908)
Q Consensus 164 ----~~~~~~~~l~~~~~~~~~~i~~~~~-------------~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~-~~ 225 (908)
...++..+|+++|..+|..|..... +...|||||+++++.++++|||||||||||++|.+ ++
T Consensus 153 ~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g 232 (467)
T 2pnq_A 153 TGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDG 232 (467)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEEECCCC
T ss_conf 44444020999999999999999997554202321111134567898413999999899799998778569999706899
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC-CCCCCCCCCCCC
Q ss_conf 4699967898999995599999982987963021236879886567887789999990101599757-643222358433
Q 002560 226 EIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYP-GTAFTRSIGDSI 304 (908)
Q Consensus 226 ~~~~~~lt~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~-g~~~tra~Gd~~ 304 (908)
.|.+.+||.||++.++.|++||.++|+.... ..++.+++.. .+++||||||..
T Consensus 233 ~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~--------------------------~~~~~~~Rv~G~l~vtRAlGd~~ 286 (467)
T 2pnq_A 233 SWSAVTLSNDHNAQNERELQRLKLEHPKNEA--------------------------KSVVKQDRLLGLLMPFRAFGDVK 286 (467)
T ss_dssp CEEEEECCCCCSTTCHHHHHHHHHTSCGGGH--------------------------HHHBSSSSBTTTBSSSBCEECGG
T ss_pred CEEEEECCCCCCCCCHHHHHHHHHCCCCCCC--------------------------CEEEECCCCCCCCCCCHHCCCHH
T ss_conf 5789988878999999999999980998656--------------------------60675683156402000117614
Q ss_pred CCC--------------------------------CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHCCC
Q ss_conf 346--------------------------------891055319999907997799997576311358688999985169
Q 002560 305 AET--------------------------------IGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKYK 352 (908)
Q Consensus 305 ~~~--------------------------------~~v~~~Pdv~~~~l~~~d~flil~SDGl~d~l~~~ei~~~v~~~~ 352 (908)
+|. ++++++||+..+++.++|.|||||||||||+|+++++++++....
T Consensus 287 ~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~ 366 (467)
T 2pnq_A 287 FKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYL 366 (467)
T ss_dssp GTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf 20440233332002346443321001366434678755456608999858998499998567223578499999999998
Q ss_pred ------CH------------------------------HHHHHHHHHHHHHHHH----HC--------------CCCCCC
Q ss_conf ------98------------------------------9999999999999998----20--------------999798
Q 002560 353 ------DP------------------------------RDACAAIVAESYRLWL----QY--------------ETRTDD 378 (908)
Q Consensus 353 ------~~------------------------------~~~a~~Lv~~a~~~~~----~~--------------~~~~DN 378 (908)
+| +.+|..|+..|+..|. .+ +...||
T Consensus 367 ~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~Dd 446 (467)
T 2pnq_A 367 TGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDD 446 (467)
T ss_dssp TTCSSCC-------------------------------CCHHHHHHHHHHC-------------------------CCSC
T ss_pred HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 61455685435556753777778888765303577300689999999971478767510777776623796302458798
Q ss_pred EEEEEEECCC
Q ss_conf 5999999299
Q 002560 379 ITVIVVHING 388 (908)
Q Consensus 379 iTvivv~~~~ 388 (908)
||||||+|+.
T Consensus 447 ITViVv~~~~ 456 (467)
T 2pnq_A 447 ITIIVVQFNS 456 (467)
T ss_dssp EEEEEEEECH
T ss_pred CEEEEEEECC
T ss_conf 0899999375
No 2
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=1.00 E-value=1 Score=361.76 Aligned_cols=259 Identities=27% Similarity=0.414 Sum_probs=213.5
Q ss_pred EEEECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC-
Q ss_conf 8820899028999982466788999988852399855888989838999931999371799999999999999812885-
Q 002560 86 VKVPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKF- 164 (908)
Q Consensus 86 ~~~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~- 164 (908)
......+..++++++|++| .|..|||++++...+ +++..+|+|||||| |+.+|+++++.+.+.+.+...+
T Consensus 14 ~~~~~~~~~~~~~~~s~~G-----~R~~nED~~~~~~~~--~~~~~l~~V~DGhG--G~~~a~~as~~~~~~l~~~~~~~ 84 (304)
T 2i0o_A 14 DSSDESNEFLASGSSSMQG-----WRISQEDAHNCILNF--DDQCSFFAVYDGHG--GAEVAQYCSLHLPTFLKTVEAYG 84 (304)
T ss_dssp EEEEEECSSEEEEEEEEEE-----SSSCCCEEEEEEEEE--ETTEEEEEEEECSS--CSHHHHHHHHHHHHHHHHSHHHH
T ss_pred CCCCCCCCCEEEEEEECCC-----CCCCCCCEEEEEECC--CCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 4455677855899863488-----998746789998246--99848999984999--88999999999999998535125
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCC-----------------CCCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEECCCEE
Q ss_conf 03599999999999979987423-----------------8978886408999997997999990466299998719846
Q 002560 165 HEDAVDACHSSYLTTNSQLHADV-----------------LDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEI 227 (908)
Q Consensus 165 ~~~~~~~l~~~~~~~~~~i~~~~-----------------~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~ 227 (908)
..++.++++++|..+|+.+.... .....||||++++++.++++++|||||||+|++|++.
T Consensus 85 ~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~--- 161 (304)
T 2i0o_A 85 RKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGK--- 161 (304)
T ss_dssp TTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTE---
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEECCE---
T ss_conf 31499999999999989997414577776530233442346777898417999998997999980485799998999---
Q ss_pred EEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99967898999995599999982987963021236879886567887789999990101599757643222358433346
Q 002560 228 VAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET 307 (908)
Q Consensus 228 ~~~~lt~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd~~~~~ 307 (908)
+.+||.||+|.++.|+.||.+.||.+... .| ..+.+++||+|||..+|.
T Consensus 162 -~~~LT~DH~~~~~~e~~rI~~~gg~v~~~------------------------~r------v~g~l~ltRalGd~~~k~ 210 (304)
T 2i0o_A 162 -ALEMSFDHKPEDTVEYQRIEKAGGRVTLD------------------------GR------VNGGLNLSRAIGDHGYKM 210 (304)
T ss_dssp -EEECCCCCCTTSHHHHHHHHHTTCCBCTT------------------------SC------BTTSCSCSBCEECGGGCC
T ss_pred -EEECCCCCCCCCHHHHHHHHHCCCEEEEC------------------------CE------ECCCEECCCCCCCHHHCC
T ss_conf -88938776993877999999679989869------------------------94------767565331445997725
Q ss_pred --------CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHC-C
Q ss_conf --------8910553199999079977999975763113586889999851-----6998999999999999999820-9
Q 002560 308 --------IGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK-----YKDPRDACAAIVAESYRLWLQY-E 373 (908)
Q Consensus 308 --------~~v~~~Pdv~~~~l~~~d~flil~SDGl~d~l~~~ei~~~v~~-----~~~~~~~a~~Lv~~a~~~~~~~-~ 373 (908)
++|+++||+..+++.++|.|||||||||||+++++++++++.. ..+++.+|+.|++.|+.+|... .
T Consensus 211 ~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~~a~~L~~~a~~~~~~g~~ 290 (304)
T 2i0o_A 211 NKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSKICEELFDHCLAPHTRGDG 290 (304)
T ss_dssp CTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHHHHHHHHHHHC--------
T ss_pred CCCCCCCCCEEEEECEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 86677667817731769999818998199997767323689899999999998615899999999999999875402689
Q ss_pred CCCCCEEEEEEECC
Q ss_conf 99798599999929
Q 002560 374 TRTDDITVIVVHIN 387 (908)
Q Consensus 374 ~~~DNiTvivv~~~ 387 (908)
++.||||||||+++
T Consensus 291 g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 291 TGCDNMTAIIVQFK 304 (304)
T ss_dssp ----CEEEEEEEEC
T ss_pred CCCCCEEEEEEEEC
T ss_conf 98898089999969
No 3
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=1.00 E-value=1 Score=360.69 Aligned_cols=253 Identities=26% Similarity=0.427 Sum_probs=211.7
Q ss_pred CEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC--------
Q ss_conf 90289999824667889999888523998558889-898389999319993717999999999999998128--------
Q 002560 92 KYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGT-SQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNN-------- 162 (908)
Q Consensus 92 ~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~-~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~-------- 162 (908)
+..++|+++|++| .|..|||++++...+.. .+++.||+|||||| |+.+|+++++.+.+.+....
T Consensus 19 ~~~l~~g~~s~~G-----~R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~~~~~~~~ 91 (382)
T 1a6q_A 19 GNGLRYGLSSMQG-----WRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSAGA 91 (382)
T ss_dssp ETTEEEEEEEEEE-----TSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSSSS
T ss_pred CCCEEEEEEECCC-----CCCCCCCEEEEECCCCCCCCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 8853899994478-----98777861699547888888769999985888--6899999999999999850665405777
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCC
Q ss_conf 8503599999999999979987423---8978886408999997997999990466299998719846999678989999
Q 002560 163 KFHEDAVDACHSSYLTTNSQLHADV---LDDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPF 239 (908)
Q Consensus 163 ~~~~~~~~~l~~~~~~~~~~i~~~~---~~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~lt~dh~~~ 239 (908)
.....+..+|+++|..+|+.+.... .....||||++++++.++++++|||||||+|++|++. ..+||.||++.
T Consensus 92 ~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~----~~~LT~DHs~~ 167 (382)
T 1a6q_A 92 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRK----VHFFTQDHKPS 167 (382)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTE----EEEECCCCCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEEEECCCCEEEEEECCC----EEEECCCCCCC
T ss_conf 77789999999999999999986454035778886429999998994899984787599997991----57817899899
Q ss_pred CHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC--------CCCC
Q ss_conf 95599999982987963021236879886567887789999990101599757643222358433346--------8910
Q 002560 240 REDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET--------IGVV 311 (908)
Q Consensus 240 ~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd~~~~~--------~~v~ 311 (908)
++.|+.||..+||.+.. .| .+| .+++||||||..+|. ++|+
T Consensus 168 ~~~E~~RI~~~gg~v~~-------------------------~R---v~g---~l~ltRalGd~~~K~~~~~~~~~~~v~ 216 (382)
T 1a6q_A 168 NPLEKERIQNAGGSVMI-------------------------QR---VNG---SLAVSRALGDFDYKCVHGKGPTEQLVS 216 (382)
T ss_dssp SHHHHHHHHHTTCCEET-------------------------TE---ETT---TBSCSBCEECGGGSCCTTCCGGGSSSB
T ss_pred CHHHHHHHHHCCCEEEC-------------------------CC---CCC---CEEEEEECCCHHHCCCCCCCCCCCEEE
T ss_conf 98899999866967751-------------------------33---158---410101137675404666787667366
Q ss_pred CCCEEEEEEEC-CCCCEEEEECCCCCCCCCHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
Q ss_conf 55319999907-9977999975763113586889999851----699899999999999999982099979859999992
Q 002560 312 ANPEIVVWELT-NDHPFFVLASDGVFEFLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHI 386 (908)
Q Consensus 312 ~~Pdv~~~~l~-~~d~flil~SDGl~d~l~~~ei~~~v~~----~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTvivv~~ 386 (908)
++|++..+++. ++|.|||||||||||+++++++++++.. ..+++.+|+.|++.|+.+ |+.||||||||++
T Consensus 217 ~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-----g~~DNiTvivv~~ 291 (382)
T 1a6q_A 217 PEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-----GSRDNMSVILICF 291 (382)
T ss_dssp CCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-----TCCSCEEEEEEEC
T ss_pred EEEEEEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-----CCCCCEEEEEEEE
T ss_conf 64369999803789839999666756788759999999998744798999999999999862-----9968879999991
Q ss_pred CCCCC
Q ss_conf 99887
Q 002560 387 NGLKN 391 (908)
Q Consensus 387 ~~~~~ 391 (908)
...+.
T Consensus 292 ~~~~~ 296 (382)
T 1a6q_A 292 PNAPK 296 (382)
T ss_dssp TTSCC
T ss_pred CCCCC
T ss_conf 58888
No 4
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=1.00 E-value=1 Score=360.67 Aligned_cols=253 Identities=26% Similarity=0.427 Sum_probs=213.3
Q ss_pred CCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCC-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC-----
Q ss_conf 990289999824667889999888523998558889-89838999931999371799999999999999812885-----
Q 002560 91 AKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGT-SQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKF----- 164 (908)
Q Consensus 91 ~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~-~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~----- 164 (908)
.+..++++++|++| .|..|||++++...+.. .+++.+|+|||||| |+.+|+++++.+.+.+.+...+
T Consensus 20 ~~~~~~~~~~s~~G-----~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~a~~as~~~~~~l~~~~~~~~~~~ 92 (307)
T 2p8e_A 20 AGNGLRYGLSSMQG-----WRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHA--GSRVANYCSTHLLEHITTNEDFRAAGK 92 (307)
T ss_dssp EETTEEEEEEEEEE-----TSSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSTTTC----
T ss_pred CCCCEEEEEEECCC-----CCCCCCCEEEEEECCCCCCCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 77870499985278-----99765545789724788988769999978989--999999999999999986576640454
Q ss_pred --------CHHHHHHHHHHHHHHHHHHHHCCC---CCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEECCCEEEEEECC
Q ss_conf --------035999999999999799874238---978886408999997997999990466299998719846999678
Q 002560 165 --------HEDAVDACHSSYLTTNSQLHADVL---DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVAVDLS 233 (908)
Q Consensus 165 --------~~~~~~~l~~~~~~~~~~i~~~~~---~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~~~lt 233 (908)
..++..+|+++|..+|+.+..... ....||||++++++.++++++|||||||+|++|++. ..+||
T Consensus 93 ~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~----~~~lT 168 (307)
T 2p8e_A 93 SGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQ----VCFST 168 (307)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTE----EEEEC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEEEEECCCCEEEEEECCC----CCCCC
T ss_conf 44444346799999999999999999985154125778988718999997891899973685799998996----56078
Q ss_pred CCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC------
Q ss_conf 98999995599999982987963021236879886567887789999990101599757643222358433346------
Q 002560 234 IDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET------ 307 (908)
Q Consensus 234 ~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd~~~~~------ 307 (908)
.||++.++.|+.||...||.+.. .| .+| .+++||||||..+|.
T Consensus 169 ~DH~~~~~~E~~rI~~~gg~v~~-------------------------~r---v~g---~l~ltRalGd~~~k~~~~~~~ 217 (307)
T 2p8e_A 169 QDHKPCNPREKERIQNAGGSVMI-------------------------QR---VNG---SLAVSRALGDYDYKCVDGKGP 217 (307)
T ss_dssp CCCCTTSHHHHHHHHHTTCCEET-------------------------TE---ETT---TBSCSBCEECGGGSCCTTCCG
T ss_pred CCCCCCCHHHHHHHHHCCCEEEE-------------------------CC---CCC---EEECCCCCCCHHHHCCCCCCC
T ss_conf 88899797899999986998981-------------------------75---367---570332445887722766677
Q ss_pred --CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf --8910553199999079977999975763113586889999851----6998999999999999999820999798599
Q 002560 308 --IGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK----YKDPRDACAAIVAESYRLWLQYETRTDDITV 381 (908)
Q Consensus 308 --~~v~~~Pdv~~~~l~~~d~flil~SDGl~d~l~~~ei~~~v~~----~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTv 381 (908)
++++++||+..+++.++|.|||||||||||+++++++++++.. ..+++.+|+.|++.|+.+ |+.|||||
T Consensus 218 ~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-----g~~DNiTv 292 (307)
T 2p8e_A 218 TEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWVVDTCLHK-----GSRDNMSI 292 (307)
T ss_dssp GGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-----TCCSCEEE
T ss_pred CCCEEECCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-----CCCCCEEE
T ss_conf 7781752476999981799809999788733178879999999998743799999999999999876-----99788099
Q ss_pred EEEECCCCC
Q ss_conf 999929988
Q 002560 382 IVVHINGLK 390 (908)
Q Consensus 382 ivv~~~~~~ 390 (908)
|||++...+
T Consensus 293 ivv~~~~~~ 301 (307)
T 2p8e_A 293 VLVCFSNEG 301 (307)
T ss_dssp EEEEC----
T ss_pred EEEECCCCC
T ss_conf 999878877
No 5
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=1.00 E-value=1 Score=360.30 Aligned_cols=263 Identities=24% Similarity=0.356 Sum_probs=213.4
Q ss_pred EEEEEEEECCCCCCCCCC---CCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC----CCCH
Q ss_conf 289999824667889999---888523998558889898389999319993717999999999999998128----8503
Q 002560 94 ELRYSFLSQRGYYPDALD---KANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNN----KFHE 166 (908)
Q Consensus 94 ~~~~~~~s~~G~~~~~~r---~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~----~~~~ 166 (908)
.+.+++++.+|+++...+ ..|||++++.. ...+..||||||||| |+.+|+++++.+...+.... ....
T Consensus 26 ~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~~~~~~~~ 100 (401)
T 2j4o_A 26 LSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYD--GNRVTNFVAQRLSAELLLGQLNAEHAEA 100 (401)
T ss_dssp TEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEES--SSHHHHHHHHHHHHTTSSSSCCTTSCHH
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEC---CCCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 57545784353254566667788886579960---899849999974999--7799999999999999985641034416
Q ss_pred HHHHHHHHHHHHHHHHHHHCCC-------------------------------------CCCCCCCEEEEEEEECCEEEE
Q ss_conf 5999999999999799874238-------------------------------------978886408999997997999
Q 002560 167 DAVDACHSSYLTTNSQLHADVL-------------------------------------DDSMSGTTAVTVLVRGRTIYV 209 (908)
Q Consensus 167 ~~~~~l~~~~~~~~~~i~~~~~-------------------------------------~~~~~GtT~~~~~i~~~~l~v 209 (908)
++.++|+++|..+|+.+..... ....||||++++++.++++||
T Consensus 101 ~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~l~v 180 (401)
T 2j4o_A 101 DVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYV 180 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEECCEEEE
T ss_conf 49999999999999999998889875320001235555422101111100222220134667886577999998998899
Q ss_pred EEECCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 99046629999871984699967898999995599999982987963021236879886567887789999990101599
Q 002560 210 ANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNG 289 (908)
Q Consensus 210 anvGDSR~~l~r~~~~~~~~~~lt~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~ 289 (908)
|||||||+|++|++...+.+.+||.||+|.++.|+.||.+.||.+.... ..+
T Consensus 181 anvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~----------------------------~~r 232 (401)
T 2j4o_A 181 ANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIK----------------------------QVG 232 (401)
T ss_dssp EEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHH----------------------------HHC
T ss_pred EECCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCEEECC----------------------------CCC
T ss_conf 9726846999981799866887999999998789999997099755334----------------------------750
Q ss_pred CCCCCCCCCCCCCCCCC-------------CCCCCCCCEEEE-EEECCCCCEEEEECCCCCCCC--------CHHHHHHH
Q ss_conf 75764322235843334-------------689105531999-990799779999757631135--------86889999
Q 002560 290 MYPGTAFTRSIGDSIAE-------------TIGVVANPEIVV-WELTNDHPFFVLASDGVFEFL--------SSQAVVDM 347 (908)
Q Consensus 290 ~~~g~~~tra~Gd~~~~-------------~~~v~~~Pdv~~-~~l~~~d~flil~SDGl~d~l--------~~~ei~~~ 347 (908)
..+++++||||||..+| .++++++||+.. ++++++|.|||||||||||+| ++++++++
T Consensus 233 ~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~ 312 (401)
T 2j4o_A 233 IICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAM 312 (401)
T ss_dssp CBTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCEEEEECCCHHHCCCCCCCCCCCHHHHHHH
T ss_conf 14873465110888662465433233456789765466587748847999699997541433401324578899999999
Q ss_pred HHC----CCCHHHHHHHHHHHHHHHHHH--CCCC--------CCCEEEEEEECCCC
Q ss_conf 851----699899999999999999982--0999--------79859999992998
Q 002560 348 VAK----YKDPRDACAAIVAESYRLWLQ--YETR--------TDDITVIVVHINGL 389 (908)
Q Consensus 348 v~~----~~~~~~~a~~Lv~~a~~~~~~--~~~~--------~DNiTvivv~~~~~ 389 (908)
+.. ..+++.+|+.|++.|+++|.. ..|+ .||||||||++...
T Consensus 313 v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~ 368 (401)
T 2j4o_A 313 IDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYP 368 (401)
T ss_dssp HHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 99998627999999999999999850233304774335678999859999983798
No 6
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=1.00 E-value=1 Score=359.37 Aligned_cols=253 Identities=22% Similarity=0.276 Sum_probs=211.6
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 02899998246678899998885239985588898983899993199937179999999999999981288503599999
Q 002560 93 YELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDAC 172 (908)
Q Consensus 93 ~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l 172 (908)
..+.++++|++|+|+.+.+..|||++++...+...++..||+|||||| |+.+|+++++.+...+.+... .+.++|
T Consensus 11 ~~~~~~~~s~~G~R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~~---~~~~al 85 (377)
T 3d8k_A 11 GRTVCASATSRNRRPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQ--GRHSAMWLAQNVMNYLNDLRD---VNEEEI 85 (377)
T ss_dssp HHHHHHHTTTCEEEEEECC---CEEEEEEEECSSCTTEEEEEEEEBSS--SSHHHHHHHHHHHHHHTTCSS---SSHHHH
T ss_pred CCEEEEEEECCCCCCCCCCCHHCCEEEEECCCCCCCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHHHCC---CHHHHH
T ss_conf 868999998467997445520131699713458999869999974998--489999999999999987135---689999
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE-------------------------------------------------
Q ss_conf 9999999799874238978886408999997-------------------------------------------------
Q 002560 173 HSSYLTTNSQLHADVLDDSMSGTTAVTVLVR------------------------------------------------- 203 (908)
Q Consensus 173 ~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~------------------------------------------------- 203 (908)
+++|..+|..+..... .+|||++++++.
T Consensus 86 ~~af~~~d~~l~~~~~---~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~~ 162 (377)
T 3d8k_A 86 TRQFERMDGDLRAANL---PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRAA 162 (377)
T ss_dssp HHHHHHHHHHHHHHTC---CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGGT
T ss_pred HHHHHHHHHHHHHCCC---CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 9999999999985056---7887148999850456542223343346544322233222346653220000013453345
Q ss_pred --CCEEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf --997999990466299998719846999678989999955999999829879630212368798865678877899999
Q 002560 204 --GRTIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDP 281 (908)
Q Consensus 204 --~~~l~vanvGDSR~~l~r~~~~~~~~~~lt~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p 281 (908)
++++|+|||||||+|++|++ .+.+||.||+|.++.|+.||.++||.+....
T Consensus 163 ~~~~~l~vanvGDSRa~l~r~g----~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~----------------------- 215 (377)
T 3d8k_A 163 KGIYTIHVASLGNSRCVLKSGR----TAIHLSTPHTASSHKERHRVQAAGGVFTTVN----------------------- 215 (377)
T ss_dssp TCEEEEEEEEESSCEEEEEETT----EEEESSCCCSSSSHHHHHHHHTTTCCEEECS-----------------------
T ss_pred CCCCEEEEEECCCCEEEEEECC----EEEECCCCCCCCCHHHHHHHHHCCCEEEECC-----------------------
T ss_conf 6777699998666628999899----9988875889898889999997598787049-----------------------
Q ss_pred CCEECCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHC---
Q ss_conf 90101599757643222358433346--------8910553199999079977999975763113586889999851---
Q 002560 282 PRLWVPNGMYPGTAFTRSIGDSIAET--------IGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK--- 350 (908)
Q Consensus 282 ~r~~~~~~~~~g~~~tra~Gd~~~~~--------~~v~~~Pdv~~~~l~~~d~flil~SDGl~d~l~~~ei~~~v~~--- 350 (908)
+.|..+| ++++||||||..+|. ++++++||+..++++++|. ||||||||||+++++++++.+..
T Consensus 216 -g~~rv~G---~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D~-llL~SDGl~d~ls~~e~v~~v~~~~~ 290 (377)
T 3d8k_A 216 -GELLLGG---VVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDD-IVAGTAGAFAHFRSHAAIAAAIALYP 290 (377)
T ss_dssp -SSEEETT---TBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTCE-EEEECGGGGCSCSSHHHHHHHHTTSC
T ss_pred -CCEEECC---CEECCEEECCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCE-EEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf -9478857---361134405766534555665568543378278998699999-99997886457784999999998732
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf --6998999999999999999820999798599999929988
Q 002560 351 --YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLK 390 (908)
Q Consensus 351 --~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTvivv~~~~~~ 390 (908)
..+++.+|+.|++.|+.+ |+.||||||||++...+
T Consensus 291 ~~~~~~~~~a~~Lv~~A~~~-----g~~DNiTvivv~~~~~~ 327 (377)
T 3d8k_A 291 VSPETVLDAAKAMVVNAKRR-----KVTKNISTFVRHLPESR 327 (377)
T ss_dssp CCGGGHHHHHHHHHHTTTTS-----SCCSCCCEEEEECCSSC
T ss_pred CCCCCHHHHHHHHHHHHHHC-----CCCCCEEEEEEEECCCC
T ss_conf 25889999999999999866-----99999899999951876
No 7
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=1.00 E-value=1 Score=355.80 Aligned_cols=250 Identities=28% Similarity=0.461 Sum_probs=203.5
Q ss_pred EEEEEECCCCCCCCCCCCCCCEEEEECCCCC------------------CCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9999824667889999888523998558889------------------8983899993199937179999999999999
Q 002560 96 RYSFLSQRGYYPDALDKANQDSFCIHTPFGT------------------SQDDHFFGVFDGHGEFGAQCSQFVKRKLCEN 157 (908)
Q Consensus 96 ~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~------------------~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~ 157 (908)
.||..|++| .|..|||++++...+.. ..++.||+|||||| |+.+++++++.+...
T Consensus 15 ~~G~~s~~G-----~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~ 87 (337)
T 3qn1_B 15 LWGTVSIQG-----NRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHG--GHKVADYCRDRLHFA 87 (337)
T ss_dssp CEEEEEECT-----TSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEES--SSHHHHHHHHHHHHH
T ss_pred CEEEEEEEE-----CCCHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHH
T ss_conf 668888000-----8712220789875442164100034445655444677727999970888--756999999999999
Q ss_pred HHH----CCC----------CCHHHHHHHHHHHHHHHHHHHHCC--------------CCCCCCCCEEEEEEEECCEEEE
Q ss_conf 981----288----------503599999999999979987423--------------8978886408999997997999
Q 002560 158 LLR----NNK----------FHEDAVDACHSSYLTTNSQLHADV--------------LDDSMSGTTAVTVLVRGRTIYV 209 (908)
Q Consensus 158 l~~----~~~----------~~~~~~~~l~~~~~~~~~~i~~~~--------------~~~~~~GtT~~~~~i~~~~l~v 209 (908)
+.+ ... ....+..+++++|..+|.++.... .....||||++++++.++++|+
T Consensus 88 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~ 167 (337)
T 3qn1_B 88 LAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVV 167 (337)
T ss_dssp HHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEE
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEE
T ss_conf 99999763233301455411378999999999998609987532101345542112345567898649999998998999
Q ss_pred EEECCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 99046629999871984699967898999995599999982987963021236879886567887789999990101599
Q 002560 210 ANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNG 289 (908)
Q Consensus 210 anvGDSR~~l~r~~~~~~~~~~lt~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~ 289 (908)
|||||||+|++|++. ..+||.||++.++.|+.||...||.+...+. +..+
T Consensus 168 anvGDSR~~l~r~g~----~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~-------------------------~r~~- 217 (337)
T 3qn1_B 168 SNCGDSRAVLFRGKE----AMPLSVDHKPDREDEYARIENAGGKVIQWQG-------------------------ARVF- 217 (337)
T ss_dssp EEESSCEEEEEETTE----EEESCCCCCTTSHHHHHHHHHTTCCEEESSS-------------------------EEET-
T ss_pred EECCCCEEEEEECCE----EEEECCCCCCCCHHHHHHHHHCCCEEEECCC-------------------------CEEC-
T ss_conf 963684799994997----5154577888998999999976984896178-------------------------4015-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHC-------------------
Q ss_conf 7576432223584333468910553199999079977999975763113586889999851-------------------
Q 002560 290 MYPGTAFTRSIGDSIAETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAK------------------- 350 (908)
Q Consensus 290 ~~~g~~~tra~Gd~~~~~~~v~~~Pdv~~~~l~~~d~flil~SDGl~d~l~~~ei~~~v~~------------------- 350 (908)
+.+++||+|||..+++. ++++|++..+++.+.+.|||||||||||+++++++++++..
T Consensus 218 --g~l~~sRalGd~~~~~~-v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (337)
T 3qn1_B 218 --GVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGK 294 (337)
T ss_dssp --TTBSCSBCEECGGGTTT-SBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCS
T ss_pred --CCCCCCCCCCCCCCCCC-CCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf --86400312164012688-787666999970799979999844842488889999999998643111235553111134
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf --6998999999999999999820999798599999929988
Q 002560 351 --YKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLK 390 (908)
Q Consensus 351 --~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTvivv~~~~~~ 390 (908)
..+++.+|+.|++.|+.+ |+.||||||||++....
T Consensus 295 ~~~~~~~~~a~~Lv~~A~~~-----g~~DNiTvivv~l~~~~ 331 (337)
T 3qn1_B 295 GIDPACQAAADYLSMLALQK-----GSKDNISIIVIDLKAQR 331 (337)
T ss_dssp SCCHHHHHHHHHHHHHHHHT-----TCCSCEEEEEEECCSCC
T ss_pred CCCHHHHHHHHHHHHHHHHC-----CCCCCEEEEEEEECCCC
T ss_conf 46706999999999999973-----99988799999956876
No 8
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=1.00 E-value=1 Score=353.62 Aligned_cols=262 Identities=22% Similarity=0.352 Sum_probs=206.8
Q ss_pred EEEEEEEEECCCCCCCCCCCCCCCEEEEECCC-CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC-------
Q ss_conf 02899998246678899998885239985588-8989838999931999371799999999999999812885-------
Q 002560 93 YELRYSFLSQRGYYPDALDKANQDSFCIHTPF-GTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKF------- 164 (908)
Q Consensus 93 ~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~-~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~------- 164 (908)
..+.++++|++| .|+.|||++++.... ....+..||+|||||| |+.+++++++.+...+.+...+
T Consensus 20 ~~~~~~~~s~~G-----~R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~l~~~~~~~~~~~~l 92 (324)
T 2i44_A 20 PAFDAAIFTDIG-----GRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLISSPAWQEVTEML 92 (324)
T ss_dssp TTEEEEEEEECT-----TSSSCCEEEEEESCCSTTCSSEEEEEEEEEES--SSHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCEEEEEEECCC-----CCCCCCCEEEEEECCCCCCCCEEEEEEECCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 535789887888-----99866775899846788888759999969998--36999999999999997426778888876
Q ss_pred -------------CHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCEEEEEEEECCEEEEEEECCCEEEEEEECCCEEEE
Q ss_conf -------------035999999999999799874238--97888640899999799799999046629999871984699
Q 002560 165 -------------HEDAVDACHSSYLTTNSQLHADVL--DDSMSGTTAVTVLVRGRTIYVANSGDSRAVLAERRGKEIVA 229 (908)
Q Consensus 165 -------------~~~~~~~l~~~~~~~~~~i~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~~l~r~~~~~~~~ 229 (908)
..++..+++++|..+|+.+..... ....+|+|++++++.++++|+|||||||+|++|+++..+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~~~g~~~ 172 (324)
T 2i44_A 93 RSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNC 172 (324)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEEEEEETTEEEE
T ss_pred HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEEECCCCCCEE
T ss_conf 31477432222232259999999999999999987763277778877089999799599997368648999615999668
Q ss_pred EECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC----CC-
Q ss_conf 9678989999955999999829879630212368798865678877899999901015997576432223584----33-
Q 002560 230 VDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGD----SI- 304 (908)
Q Consensus 230 ~~lt~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd----~~- 304 (908)
.+||.||+|.++.|++||.++||.+... .++|.+.+...| .+++||++|| ..
T Consensus 173 ~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~--------------------~~~~~~~~~~~g---~l~~sra~Gd~p~~~~~ 229 (324)
T 2i44_A 173 EFLTVDHKPDMPHEKLRIMRNGGSVEYL--------------------HNHNNKPFIRGG---DFSFRKSRGEQPMQLQY 229 (324)
T ss_dssp EESCCCCCTTSHHHHHHHHHTTCEEECC--------------------TTCTTSCEEECT---THHHHHHTTCCCCCBSS
T ss_pred EECCCCCCCCCHHHHHHHHHCCCEEEEC--------------------CCCCCCCCCCCC---CCCCHHHCCCCCCCCEE
T ss_conf 8889999994877999999769879833--------------------456677751047---51321102875321000
Q ss_pred --------CCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHCC----CCHHH--HHHHHHHHHHHHHH
Q ss_conf --------34689105531999990799779999757631135868899998516----99899--99999999999998
Q 002560 305 --------AETIGVVANPEIVVWELTNDHPFFVLASDGVFEFLSSQAVVDMVAKY----KDPRD--ACAAIVAESYRLWL 370 (908)
Q Consensus 305 --------~~~~~v~~~Pdv~~~~l~~~d~flil~SDGl~d~l~~~ei~~~v~~~----~~~~~--~a~~Lv~~a~~~~~ 370 (908)
.+.++++++||+..+++.++|.|||||||||||+++++++++++... .+++. +|+.|++.|+.+
T Consensus 230 ~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~~-- 307 (324)
T 2i44_A 230 SRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRN-- 307 (324)
T ss_dssp SBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTT--
T ss_pred CCCCCCCCCCCCEEEECCEEEEEECCCCCEEEEEECCCHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC--
T ss_conf 224577566689376247899998589874999976701215798999999999875589877999999999999866--
Q ss_pred HCCCCCCCEEEEEEECCCC
Q ss_conf 2099979859999992998
Q 002560 371 QYETRTDDITVIVVHINGL 389 (908)
Q Consensus 371 ~~~~~~DNiTvivv~~~~~ 389 (908)
|+.||||||||++.++
T Consensus 308 ---g~~DNiTvivv~~~~~ 323 (324)
T 2i44_A 308 ---QSADNITAMTVFFKKT 323 (324)
T ss_dssp ---CCCCCEEEEEEEEC--
T ss_pred ---CCCCCCEEEEEEEECC
T ss_conf ---9988977999995089
No 9
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=1.00 E-value=1 Score=352.26 Aligned_cols=252 Identities=31% Similarity=0.462 Sum_probs=212.3
Q ss_pred EEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Q ss_conf 89999824667889999888523998558889898389999319993717999999999999998128850359999999
Q 002560 95 LRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHEDAVDACHS 174 (908)
Q Consensus 95 ~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~~~~~l~~ 174 (908)
+.++++|++| .|..|||++++.. ..++..+|+|||||| |+.+++++++.+...+.+......++..+++.
T Consensus 122 ~~~g~~s~~G-----~R~~NED~~~~~~---~~~~~~l~~VaDG~G--G~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~ 191 (389)
T 4da1_A 122 ENVGCASQIG-----KRKENEDRFDFAQ---LTDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLETLLTL 191 (389)
T ss_dssp GGCEEEEECT-----TSSSCCEEEEEEE---CSSSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred EEEEEECCCC-----CCCCCCCEEEEEE---CCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 0279854889-----9988756066554---599879999997989--87999999999999999974026579999999
Q ss_pred HHHHHHHHHHHCCC-----CCCCCCCEEEEEEEECC-EEEEEEECCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHH
Q ss_conf 99999799874238-----97888640899999799-7999990466299998719846999678989999955999999
Q 002560 175 SYLTTNSQLHADVL-----DDSMSGTTAVTVLVRGR-TIYVANSGDSRAVLAERRGKEIVAVDLSIDQTPFREDELERVK 248 (908)
Q Consensus 175 ~~~~~~~~i~~~~~-----~~~~~GtT~~~~~i~~~-~l~vanvGDSR~~l~r~~~~~~~~~~lt~dh~~~~~~E~~Ri~ 248 (908)
+|..+|..+..... ....||||++++++.++ ++++|||||||+|++|++. ..+||.||++.++.|++||.
T Consensus 192 a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~----~~~LT~DHs~~~~~E~~Ri~ 267 (389)
T 4da1_A 192 AFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGK----PMKLTIDHTPERKDEKERIK 267 (389)
T ss_dssp HHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTE----EEECCCCCCTTSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEEECCEEEEEECCE----EEEECCCCCCCCHHHHHHHH
T ss_conf 99998899987764124545689987079999976984999970063899997999----57859898999978999999
Q ss_pred HCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC-CCE
Q ss_conf 8298796302123687988656788778999999010159975764322235843334689105531999990799-779
Q 002560 249 LSGARVLTLDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVWELTND-HPF 327 (908)
Q Consensus 249 ~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd~~~~~~~v~~~Pdv~~~~l~~~-d~f 327 (908)
+.||.+.... .++ .+ .++ .+++||+||+..+|.++++++|++..+++.++ |.|
T Consensus 268 ~~gG~v~~~~-------------------~~~-~~---~~g---~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~ 321 (389)
T 4da1_A 268 KCGGFVAWNS-------------------LGQ-PH---VNG---RLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSF 321 (389)
T ss_dssp HHTCCEECC----------------------C-CE---ETT---TBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEE
T ss_pred HCCCEEECCC-------------------CCC-CC---CCC---EEEEEEEECCHHHCCCCCCCCCCEEEEEECCCCCCE
T ss_conf 8499684466-------------------777-62---888---284675317865444877779945899974799829
Q ss_pred EEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCC
Q ss_conf 9997576311358688999985169989999999999999998209997985999999299887
Q 002560 328 FVLASDGVFEFLSSQAVVDMVAKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLKN 391 (908)
Q Consensus 328 lil~SDGl~d~l~~~ei~~~v~~~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTvivv~~~~~~~ 391 (908)
||||||||||+++++++++++....+++.+|+.|++.|+.+ |+.||||||||++..+..
T Consensus 322 llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv~~A~~~-----g~~DNiTvivv~~~~~~~ 380 (389)
T 4da1_A 322 LVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQY-----GTEDNSTAVVVPFGAWGK 380 (389)
T ss_dssp EEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHHHHHHHH-----TCCSCEEEEEEEECCC--
T ss_pred EEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHC-----CCCCCEEEEEEEECCCCC
T ss_conf 99983995437898999999985699999999999999975-----999984999999658888
No 10
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=1.00 E-value=1 Score=351.89 Aligned_cols=255 Identities=24% Similarity=0.377 Sum_probs=209.8
Q ss_pred EECCCEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 20899028999982466788999988852399855888989838999931999371799999999999999812885035
Q 002560 88 VPSAKYELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSQDDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNNKFHED 167 (908)
Q Consensus 88 ~~~~~~~~~~~~~s~~G~~~~~~r~~neD~~~~~~~~~~~~~~~~~~V~DGhGg~G~~as~~~~~~l~~~l~~~~~~~~~ 167 (908)
+..++..+.++++|++| .|..|||++++...+...++..||+|||||| |+.||++++++|...+.+....
T Consensus 6 ~~~~~~~~~~~~~s~~G-----~R~~nED~~~v~~~~~~~~~~~lf~VfDGHG--G~~as~~a~~~l~~~l~~~~~~--- 75 (364)
T 2isn_A 6 ITVNEWYTTTVAATMLG-----RRPTDEDAILVSAPATSRPNVRIKAVFDGHA--GEATSQYCAKHAAKHLGKLSEF--- 75 (364)
T ss_dssp EEEEETTEEEEEEEECT-----TSSSCCEEEEEECC----CCEEEEEEEEEES--CSHHHHHHHHHHHHHHTTCSSC---
T ss_pred EEECCCCEEEEEEECCC-----CCCCCCCEEEEECCCCCCCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHHHHCC---
T ss_conf 99638816899987378-----9986777259841479999818999997989--8999999999999999875403---
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC-------------------------------------------
Q ss_conf 9999999999997998742389788864089999979-------------------------------------------
Q 002560 168 AVDACHSSYLTTNSQLHADVLDDSMSGTTAVTVLVRG------------------------------------------- 204 (908)
Q Consensus 168 ~~~~l~~~~~~~~~~i~~~~~~~~~~GtT~~~~~i~~------------------------------------------- 204 (908)
...+++++|..+|+.+.........+|||++++++.+
T Consensus 76 ~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~ 155 (364)
T 2isn_A 76 TFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVG 155 (364)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CC
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 58899999999999998741467788763132113314553111123311233333210123444421001013420014
Q ss_pred -----------------CEEEEEEECCCEEEEEE-ECCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCC
Q ss_conf -----------------97999990466299998-719846999678989999955999999829879630212368798
Q 002560 205 -----------------RTIYVANSGDSRAVLAE-RRGKEIVAVDLSIDQTPFREDELERVKLSGARVLTLDQIEGLKNP 266 (908)
Q Consensus 205 -----------------~~l~vanvGDSR~~l~r-~~~~~~~~~~lt~dh~~~~~~E~~Ri~~~gg~v~~~~~~~~~~~~ 266 (908)
+++|+|||||||+|+++ ++. +.+||.||++.++.|+.||.++||.|...
T Consensus 156 ~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~----~~~LT~DH~~~~~~e~~rI~~~gG~v~~~--------- 222 (364)
T 2isn_A 156 RYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGG----LTRLSKDHKPNHPTEASRIEKAGGSVETF--------- 222 (364)
T ss_dssp SSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSC----EEECCCCCCTTSHHHHHHHHHTTCCEEES---------
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCE----EEECCCCCCCCCHHHHHHHHHCCCEEECC---------
T ss_conf 43333323443212576679999872687999940998----89867678898788999999759868427---------
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCEEEEEEECCCCCEEEEECCCCCCC
Q ss_conf 86567887789999990101599757643222358433346--------8910553199999079977999975763113
Q 002560 267 DVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAET--------IGVVANPEIVVWELTNDHPFFVLASDGVFEF 338 (908)
Q Consensus 267 ~~~~~~~~~~~~~~p~r~~~~~~~~~g~~~tra~Gd~~~~~--------~~v~~~Pdv~~~~l~~~d~flil~SDGl~d~ 338 (908)
++ +| .++ .+++||||||..+|. ++++++||+..+++.++| |||||||||||+
T Consensus 223 ------------~~-~r---v~g---~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ 282 (364)
T 2isn_A 223 ------------DV-PR---VDG---VLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEP 282 (364)
T ss_dssp ------------SS-EE---ETT---TBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCS
T ss_pred ------------CC-CC---CCC---CEEEEEEECCHHHCCCCCCCCCCCCEEEEEEEEEEECCCCC-EEEEECCCCCCC
T ss_conf ------------87-63---478---53247872333321464567556845787579999879999-999986887777
Q ss_pred CC--HHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
Q ss_conf 58--68899998-----516998999999999999999820999798599999929988
Q 002560 339 LS--SQAVVDMV-----AKYKDPRDACAAIVAESYRLWLQYETRTDDITVIVVHINGLK 390 (908)
Q Consensus 339 l~--~~ei~~~v-----~~~~~~~~~a~~Lv~~a~~~~~~~~~~~DNiTvivv~~~~~~ 390 (908)
++ ++++.+++ ....+++.+|+.|++.|+.+ |+.||||||||++...+
T Consensus 283 l~~~~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~-----g~~DNiTvivv~~~~~~ 336 (364)
T 2isn_A 283 SGMDWAYVRDLTVAEMQRSKGDLEEVAARVMDYAYDM-----NSQDNISVMLVAFHNQE 336 (364)
T ss_dssp SSCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHT-----TCCSCEEEEEEEECSSC
T ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC-----CCCCCEEEEEEECCCCC
T ss_conf 7777899999999997645799999999999999866-----99999899999907988
Done!