BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>002563
MEISERLLVGSDSSRRAKATDVSRKSFKGNVKSLSVQVDRSSSVDSKKTSLGERLYAAFV
TEGTEQTKFGKQDNSDRETSRTVTVKPLRKKLISELPSLDEDSKRRLSSLMKDAASSVRM
EEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAIRTALKKLDVDGSSIEDAKAVCEP
EVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWYVNDGDMIVDFC
CGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKELAPGSRLIMGL
NPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWEDDQFLSGKSFY
LPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKHGHISRPQSRTQMERNCYET
HAVDHPKEEGQGDASMLIDLPLQINVTKELRNEAREDDKAGFPDNATEGGGESSHGHGDN
QSGKTSRKRKRDRKKHGSGMRENSPLDGQNRGRHLASGIHGMSKHSPANIANVSPLLEGH
SSKSIDMPSHVGSGDNDCQHFSNKGMPLSSPTIVIDGTSPLGVHSSKTIEMLSHDDGCQC
DQMPHRSPVNVSSGILEGESSKPIEIPALSGIGDGGYEHFGVGMSHHSAATVIDGASSLQ
GLSSKSIEMPSYTQFDDNVHQHFEDKGVPRCSPAKVIAKSSLEDHSSKSIDIPSQTGFGS
DYQHHEPTRSSSHIGTTYYGTQAGIPNDMGSYGMSSLNNGLSHGANLDERYTGYVRNTDS
LGYRPSMSTDRELTMWPLARIYGQDFPAPTPGYGQMGSVPSNLYGNLGSSAEASYRMSTS
AMDRYAPRLHQLNNTRMNTFRSEPFMPSRFGFYDSRAPQPGFFADMDFGPGFHPPFPQQG
SGGWLDD

High Scoring Gene Products

Symbol, full name Information P value
EDM2
ENHANCED DOWNY MILDEW 2
protein from Arabidopsis thaliana 1.6e-132
ELP1
EDM2-like protein1
protein from Arabidopsis thaliana 1.2e-90

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  002563
        (907 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2173857 - symbol:EDM2 "ENHANCED DOWNY MILDEW 2...  1262  1.6e-132  2
TAIR|locus:2162667 - symbol:ELP1 "EDM2-like protein1" spe...   904  1.2e-90   1


>TAIR|locus:2173857 [details] [associations]
            symbol:EDM2 "ENHANCED DOWNY MILDEW 2" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0007165 "signal transduction" evidence=IMP]
            [GO:0050832 "defense response to fungus" evidence=IMP] [GO:0009911
            "positive regulation of flower development" evidence=IMP]
            [GO:0010228 "vegetative to reproductive phase transition of
            meristem" evidence=IMP] InterPro:IPR001841 InterPro:IPR001965
            SMART:SM00184 SMART:SM00249 GO:GO:0005634 EMBL:CP002688
            GO:GO:0007165 GO:GO:0050832 GO:GO:0008270 GO:GO:0003700
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009911 GO:GO:0010228
            InterPro:IPR022702 Pfam:PF12047 IPI:IPI00538872
            RefSeq:NP_001190545.1 RefSeq:NP_200350.2 UniGene:At.25531
            ProteinModelPortal:F4K3G5 SMR:F4K3G5 PRIDE:F4K3G5
            EnsemblPlants:AT5G55390.1 EnsemblPlants:AT5G55390.2 GeneID:835632
            KEGG:ath:AT5G55390 OMA:RSFHATK Uniprot:F4K3G5
        Length = 1297

 Score = 1262 (449.3 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
 Identities = 245/394 (62%), Positives = 304/394 (77%)

Query:    51 LGERLYAAFVTEGTEQTKFGKQDNSDRETSRTVTVKPLRKKLISELPSLDEDSKRRLSSL 110
             LGERL++   T+     K G+    D + ++T ++    K+  SE+P+LD DS+RRL ++
Sbjct:   554 LGERLFS--YTQEPNPVKPGRVIPVDSKHNKTDSIAS--KEPGSEIPTLDNDSQRRLLAV 609

Query:   111 MKDAASSVRMEEILKRHKIPSTHA-YASKSAVDKAITLGKVEGSVEAIRTALKKLDVDGS 169
             MK A   + M  ILK+ KI ST + +++++ VDK IT+GKVEGSV+AIRTALKKL+ +G 
Sbjct:   610 MKKATEEITMGTILKKFKIQSTMSTHSTRNVVDKTITMGKVEGSVQAIRTALKKLE-EGG 668

Query:   170 SIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVDKLQAIVDKLHWY 229
             +IEDAKAVCEPEVLSQI KWK+KLKVYLAPFLHG RYTSFGRHFT  +KLQ IVD+LHWY
Sbjct:   669 NIEDAKAVCEPEVLSQILKWKDKLKVYLAPFLHGARYTSFGRHFTNPEKLQQIVDRLHWY 728

Query:   230 VNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNFEKRDWMTVEPKE 289
              +DGDMIVDFCCG+NDFSCLM  KL+ETGK CLYKNYD+ PAKN+FNFE++DWMTV   E
Sbjct:   729 ADDGDMIVDFCCGSNDFSCLMNAKLEETGKKCLYKNYDLFPAKNNFNFERKDWMTVSKDE 788

Query:   290 LAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERLDRKESAYELVWE 349
             L PGS+LIMGLNPPFGV A LANKFI KALEF PK+LILIVPPETERLD+K+S+Y L+WE
Sbjct:   789 LEPGSKLIMGLNPPFGVNASLANKFITKALEFRPKILILIVPPETERLDKKKSSYVLIWE 848

Query:   350 DDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKALAEKHGHISRPQS 409
             D  FLSG SFYLPGSV+E DKQ++ WN+  PPL LWSR D+AA HK +AEKH H+SR   
Sbjct:   849 DKTFLSGNSFYLPGSVNEEDKQLEDWNLVPPPLSLWSRSDFAAKHKKIAEKHCHLSRDVG 908

Query:   410 RTQMERNCYETHAVDHPKEEGQGDASMLIDLPLQ 443
              ++++    E +A  HP   G  D  M  D+P++
Sbjct:   909 SSKLKIVEEEANASLHPL--GASDG-MCDDIPME 939

 Score = 58 (25.5 bits), Expect = 1.6e-132, Sum P(2) = 1.6e-132
 Identities = 12/26 (46%), Positives = 16/26 (61%)

Query:   844 RYAPRLHQLNNTRMNTFRSEP-FMPS 868
             RYAP   Q+N  RM++F  +P   PS
Sbjct:  1225 RYAPHFDQMNYQRMSSFPPQPPLQPS 1250


>TAIR|locus:2162667 [details] [associations]
            symbol:ELP1 "EDM2-like protein1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
            SMART:SM00249 EMBL:CP002688 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 IPI:IPI00539418 RefSeq:NP_199620.4
            UniGene:At.51084 ProteinModelPortal:F4K064 SMR:F4K064
            EnsemblPlants:AT5G48090.1 GeneID:834861 KEGG:ath:AT5G48090
            OMA:IETECES Uniprot:F4K064
        Length = 677

 Score = 904 (323.3 bits), Expect = 1.2e-90, P = 1.2e-90
 Identities = 181/347 (52%), Positives = 235/347 (67%)

Query:    98 SLDEDSKRRLSSLMKDAASSVRMEEILKRHKIPSTHAYASKSAVDKAITLGKVEGSVEAI 157
             S DE  ++R+  ++ +  SS   +E +K  +     +Y S +   K IT G V   V A 
Sbjct:   342 SCDE-VEQRVMGIIDEVESSFNFDEFVKSRRPTHIKSYHSGNYFSKNITTGLVRTHVNAA 400

Query:   158 RTALKKLDVDGSSIEDAKAVCEPEVLSQIFKWKNKLKVYLAPFLHGMRYTSFGRHFTKVD 217
             R ALK  + +G    DA+A+ +P+ L Q+ K K KL++  +PFLHGMRYTSFGRHFT  +
Sbjct:   401 RAALKMFE-EGRD-RDARALFDPDSLLQLMKHKKKLEI--SPFLHGMRYTSFGRHFTNPE 456

Query:   218 KLQAIVDKLHWYVNDGDMIVDFCCGANDFSCLMKKKLDETGKNCLYKNYDILPAKNDFNF 277
             KL+ IV++LHWYV +GD +VDFCCG+NDFSCLMK+KL ETGK C YKN D++P KN+FNF
Sbjct:   457 KLKEIVERLHWYVENGDTVVDFCCGSNDFSCLMKEKLMETGKICFYKNLDLIPPKNNFNF 516

Query:   278 EKRDWMTVEPKELAPGSRLIMGLNPPFGVKAGLANKFINKALEFNPKLLILIVPPETERL 337
             E RDW++V+ +EL  GS+LIMGLNPPFG KA LAN FI KALEF PK+LILIVP ET+R+
Sbjct:   517 EMRDWLSVKEEELPDGSQLIMGLNPPFGYKASLANTFIKKALEFKPKILILIVPSETKRV 576

Query:   338 DRKESAYELVWEDDQFLSGKSFYLPGSVDENDKQMDQWNMTAPPLYLWSRHDYAAHHKAL 397
             D  +  YEL+WED   L+G SFYLPGSVD NDK ++QWN   PPLYLWSR D +  HK  
Sbjct:   577 DAIDD-YELIWEDRNLLAGMSFYLPGSVDVNDKTIEQWNNITPPLYLWSRRDLSRSHKTT 635

Query:   398 AEKHGHISRPQSRTQMERNCY--ETHAVDHPKEEGQGDASMLIDLPL 442
             A + GHI      TQM    Y  ++H  + P  +G  D  M+ D+ +
Sbjct:   636 AVQQGHI------TQMHHFTYNGDSHHTEIP--QGDDDTDMVQDMEI 674


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.131   0.388    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      907       852   0.00082  122 3  11 23  0.45    34
                                                     37  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  625 (66 KB)
  Total size of DFA:  436 KB (2208 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  79.38u 0.12s 79.50t   Elapsed:  00:00:03
  Total cpu time:  79.38u 0.12s 79.50t   Elapsed:  00:00:03
  Start:  Tue May 21 14:14:29 2013   End:  Tue May 21 14:14:32 2013

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