Your job contains 1 sequence.
>002564
MGIFEPYKAIGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR
ALASYRDYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAF
KGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW
GSSISSCVSSPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLL
ASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTT
DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKR
ARKLKMKEEELKLKPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPC
PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGV
ACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIR
LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS
ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEG
CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLINLDIIKARNKP
IEPPKKPEKAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIPVSQFIQLLHS
CAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEI
SCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLEVQSAVWQKIDKMFQSARCVVS
FLSNSQL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002564
(907 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2135393 - symbol:AT4G04940 "AT4G04940" species... 3562 0. 1
POMBASE|SPCC1672.07 - symbol:SPCC1672.07 "U3 snoRNP-assoc... 1297 2.1e-143 2
UNIPROTKB|G3X6I6 - symbol:WDR36 "Uncharacterized protein"... 1351 5.1e-138 1
UNIPROTKB|F1NKR5 - symbol:WDR36 "Uncharacterized protein"... 1347 1.3e-137 1
UNIPROTKB|F1RLI4 - symbol:WDR36 "Uncharacterized protein"... 1332 5.2e-136 1
UNIPROTKB|F1PNT8 - symbol:WDR36 "Uncharacterized protein"... 1320 9.8e-135 1
UNIPROTKB|Q8NI36 - symbol:WDR36 "WD repeat-containing pro... 1312 6.9e-134 1
RGD|1586463 - symbol:Wdr36 "WD repeat domain 36" species:... 1307 2.3e-133 1
ZFIN|ZDB-GENE-030131-464 - symbol:wdr36 "WD repeat domain... 1288 2.4e-131 1
FB|FBgn0038146 - symbol:CG9799 species:7227 "Drosophila m... 1147 2.1e-116 1
SGD|S000004401 - symbol:UTP21 "Subunit of U3-containing 9... 982 6.4e-99 1
CGD|CAL0005566 - symbol:UTP21 species:5476 "Candida albic... 913 1.3e-91 1
UNIPROTKB|Q5ALL2 - symbol:UTP21 "Putative uncharacterized... 913 1.3e-91 1
ASPGD|ASPL0000018270 - symbol:AN8293 species:162425 "Emer... 543 4.3e-86 3
DICTYBASE|DDB_G0277019 - symbol:wdr36 "U3 snoRNP protein"... 711 3.6e-84 2
UNIPROTKB|G4N4W8 - symbol:MGG_16744 "Uncharacterized prot... 484 1.5e-80 4
WB|WBGene00012887 - symbol:Y45F10D.7 species:6239 "Caenor... 544 1.4e-73 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 199 5.7e-18 2
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 170 2.7e-17 3
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 151 4.8e-17 2
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 149 8.6e-17 2
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 151 1.8e-16 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 148 2.2e-16 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 144 7.9e-16 2
UNIPROTKB|E9PFC6 - symbol:POC1A "POC1 centriolar protein ... 141 8.8e-16 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 142 9.4e-16 2
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 143 4.7e-15 2
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 151 5.6e-15 2
SGD|S000004212 - symbol:UTP13 "Nucleolar protein" species... 153 1.2e-14 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 142 1.3e-14 2
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 171 1.8e-14 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 161 2.7e-14 2
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 152 4.2e-14 2
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 135 7.4e-14 2
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 138 1.4e-13 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 154 4.6e-13 2
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 164 4.8e-13 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 133 4.9e-13 2
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 171 6.5e-13 2
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 170 7.6e-13 2
UNIPROTKB|F1N575 - symbol:TAF5L "Uncharacterized protein"... 172 1.2e-12 2
MGI|MGI:1919039 - symbol:Taf5l "TAF5-like RNA polymerase ... 174 1.2e-12 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 126 1.3e-12 2
UNIPROTKB|P62871 - symbol:GNB1 "Guanine nucleotide-bindin... 169 1.3e-12 2
UNIPROTKB|P62872 - symbol:GNB1 "Guanine nucleotide-bindin... 169 1.3e-12 2
UNIPROTKB|P62873 - symbol:GNB1 "Guanine nucleotide-bindin... 169 1.3e-12 2
MGI|MGI:95781 - symbol:Gnb1 "guanine nucleotide binding p... 169 1.3e-12 2
RGD|2718 - symbol:Gnb1 "guanine nucleotide binding protei... 169 1.3e-12 2
ZFIN|ZDB-GENE-030131-823 - symbol:gnb1a "guanine nucleoti... 167 1.4e-12 2
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 131 1.6e-12 2
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 135 1.7e-12 2
UNIPROTKB|E1C4U3 - symbol:E1C4U3 "Uncharacterized protein... 147 1.7e-12 2
MGI|MGI:2442144 - symbol:Taf5 "TAF5 RNA polymerase II, TA... 144 3.9e-12 2
POMBASE|SPCC16A11.02 - symbol:utp13 "U3 snoRNP-associated... 182 3.9e-12 2
DICTYBASE|DDB_G0282623 - symbol:wdr3 "U3 snoRNP protein" ... 140 4.7e-12 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 125 4.8e-12 2
RGD|1311332 - symbol:Taf5 "TAF5 RNA polymerase II, TATA b... 144 5.0e-12 2
UNIPROTKB|Q15542 - symbol:TAF5 "Transcription initiation ... 144 5.0e-12 2
UNIPROTKB|E1BEN8 - symbol:TAF5 "Uncharacterized protein" ... 144 5.0e-12 2
UNIPROTKB|E2RE41 - symbol:TAF5 "Uncharacterized protein" ... 144 5.0e-12 2
ZFIN|ZDB-GENE-040426-2855 - symbol:gnb1b "guanine nucleot... 161 6.9e-12 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 125 7.7e-12 2
UNIPROTKB|E1C9D6 - symbol:GNB3 "Uncharacterized protein" ... 156 7.9e-12 2
UNIPROTKB|F1RG42 - symbol:TAF5L "Uncharacterized protein"... 170 8.2e-12 2
DICTYBASE|DDB_G0293070 - symbol:DDB_G0293070 "TROVE domai... 157 9.5e-12 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 123 1.3e-11 2
DICTYBASE|DDB_G0289115 - symbol:mhkB "myosin heavy chain ... 129 1.4e-11 2
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 123 1.9e-11 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 187 2.2e-11 1
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 125 2.6e-11 2
TAIR|locus:2089855 - symbol:AT3G21540 "AT3G21540" species... 159 2.6e-11 2
RGD|1359321 - symbol:Gnb4 "guanine nucleotide binding pro... 155 3.3e-11 2
UNIPROTKB|Q9HAV0 - symbol:GNB4 "Guanine nucleotide-bindin... 154 3.5e-11 2
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 192 3.5e-11 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 143 3.6e-11 2
SGD|S000004119 - symbol:DIP2 "Nucleolar protein" species:... 131 3.9e-11 3
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 125 4.1e-11 2
UNIPROTKB|E1C8E9 - symbol:TAF5L "Uncharacterized protein"... 168 4.8e-11 2
ZFIN|ZDB-GENE-041114-104 - symbol:tbl3 "transducin (beta)... 145 4.9e-11 2
MGI|MGI:104581 - symbol:Gnb4 "guanine nucleotide binding ... 155 5.4e-11 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 129 6.3e-11 2
POMBASE|SPCC18.05c - symbol:SPCC18.05c "notchless-like pr... 126 1.2e-10 2
UNIPROTKB|Q7YR70 - symbol:AAMP "Angio-associated migrator... 125 1.2e-10 2
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 192 1.3e-10 2
FB|FBgn0027524 - symbol:CG3909 species:7227 "Drosophila m... 179 1.3e-10 1
UNIPROTKB|P16520 - symbol:GNB3 "Guanine nucleotide-bindin... 154 1.4e-10 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 157 1.5e-10 2
UNIPROTKB|F1S845 - symbol:TAF5 "Uncharacterized protein" ... 146 1.5e-10 2
UNIPROTKB|E1BB53 - symbol:TEP1 "Uncharacterized protein" ... 131 1.6e-10 3
WB|WBGene00011051 - symbol:pfs-2 species:6239 "Caenorhabd... 136 1.9e-10 2
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 159 2.1e-10 1
DICTYBASE|DDB_G0276283 - symbol:utp13 "U3 snoRNP protein"... 138 2.1e-10 2
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 125 2.2e-10 2
UNIPROTKB|Q2KJJ5 - symbol:TBL3 "Transducin beta-like prot... 128 2.3e-10 3
SGD|S000000668 - symbol:RSA4 "WD-repeat protein involved ... 117 2.8e-10 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 137 3.0e-10 2
CGD|CAL0000293 - symbol:UTP13 species:5476 "Candida albic... 130 3.1e-10 2
UNIPROTKB|Q5AGB1 - symbol:CaO19.11744 "Putative uncharact... 130 3.1e-10 2
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 182 3.2e-10 1
UNIPROTKB|E1BB14 - symbol:GNB3 "Uncharacterized protein" ... 150 3.2e-10 2
WARNING: Descriptions of 705 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 3562 (1258.9 bits), Expect = 0., P = 0.
Identities = 669/911 (73%), Positives = 784/911 (86%)
Query: 1 MGIFEPYKAIGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
MGIFEP++AIGYITS+VPFSVQRLGTE FVTVSVGKAF IYNCAKLNLV++ PQLPKKIR
Sbjct: 1 MGIFEPFRAIGYITSTVPFSVQRLGTETFVTVSVGKAFQIYNCAKLNLVIISPQLPKKIR 60
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAF 120
ALASYRDYTF A+GN IAV +RAHQVATWS+H AKV+LLL+FGEH+LS+D++GNMFIWAF
Sbjct: 61 ALASYRDYTFVAFGNEIAVFRRAHQVATWSKHVAKVDLLLVFGEHVLSLDVEGNMFIWAF 120
Query: 121 KGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW 180
KGIEE+LAP+G+++L KFTPT I+HPDTYLNKV+VGSQEG LQLWNI+TKK LY+FKGW
Sbjct: 121 KGIEEHLAPIGNLQLTGKFTPTSIVHPDTYLNKVLVGSQEGPLQLWNINTKKMLYQFKGW 180
Query: 181 GXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLL 240
G PALDVVA+GC+DGKIHVHN++ DEE+VTF H+ RGAVTAL+FS+DG+PLL
Sbjct: 181 GSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFSTDGRPLL 240
Query: 241 ASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTT 300
ASG S GVISIWNL K+RLQSVIR+AHD++IISL+F ANEPVLMSASADNS+KMWIFDT
Sbjct: 241 ASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLKMWIFDTN 300
Query: 301 DGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKR 360
DGDPRLLRFRSGHSAPPLCIRFY+NGRHILSAGQDRAFRLFSVIQ+QQSRELSQRH+++R
Sbjct: 301 DGDPRLLRFRSGHSAPPLCIRFYSNGRHILSAGQDRAFRLFSVIQEQQSRELSQRHISRR 360
Query: 361 ARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPC 420
A+ PV++FDCAEIRERDWCNVVTCHMDTA+AYVWRLQNFVLGEHIL+PC
Sbjct: 361 AKKLRLKEEELKLKPVVSFDCAEIRERDWCNVVTCHMDTAEAYVWRLQNFVLGEHILKPC 420
Query: 421 PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGV 480
PENPT +KAC ISACGNFAV+GTAGGWIERFNLQSGISRGSY DMSE+ YAH+GEV+GV
Sbjct: 421 PENPTPIKACAISACGNFAVVGTAGGWIERFNLQSGISRGSYFDMSEKRRYAHDGEVIGV 480
Query: 481 ACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIR 540
ACDSTNTLMISAGYHGD+KVWDFK R+LKS+W+VGCSLVKIVYHRVNGLLATVADD VIR
Sbjct: 481 ACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIR 540
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 600
L+DVV L+MVR+F GHTDRITD CFSEDGKW++SS MDGSLRIWDVILA+QID +HVDV
Sbjct: 541 LYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQIDGVHVDVP 600
Query: 601 ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEG 660
ITALSLSPNMDVLATAH DQNGVYLWVN+ MFSG +++SYASGK++V+VK+PSVS++
Sbjct: 601 ITALSLSPNMDVLATAHSDQNGVYLWVNQSMFSGLPSVESYASGKDVVNVKLPSVSALTS 660
Query: 661 CQ-DENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLINLDIIKARNX 719
+ D++ + + ++ + SF + ++QIP+LVTLSLLPKSQWQSLINLDIIKARN
Sbjct: 661 SEADDDMDRQVLENSEALQASSFSIS--QKQIPELVTLSLLPKSQWQSLINLDIIKARNK 718
Query: 720 XXXXXXXXXXAPFFLPSVPSLSGEILFKP--SESTKEDTESLKVG-NKTKP-DIPVSQFI 775
APFFLPS+PSLSG+ILFK SE+ E+ E+ K N K D S F
Sbjct: 719 PIEPPKKPEKAPFFLPSIPSLSGDILFKANDSEADGENEENNKKDQNSMKNFDALESPFS 778
Query: 776 QLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDY 835
+ L S + K+F FT+Y+KSLSPS LDMELRML+IID D +EL KRPE++ I LLDY
Sbjct: 779 KHLKSSWDSKHFLDFTNYMKSLSPSALDMELRMLEIIDEDVEEELIKRPEFILIGQLLDY 838
Query: 836 LIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLEVQSAVWQKIDKMFQSA 895
I+E+SC+N+FEF+QAV++LFLKIHGET+RCH LQ+KA+KLLE QS VWQK++K+FQS
Sbjct: 839 FINEVSCKNDFEFMQAVVKLFLKIHGETIRCHPSLQEKAKKLLETQSLVWQKMEKLFQST 898
Query: 896 RCVVSFLSNSQ 906
RC+V+FLSNSQ
Sbjct: 899 RCIVTFLSNSQ 909
>POMBASE|SPCC1672.07 [details] [associations]
symbol:SPCC1672.07 "U3 snoRNP-associated protein Utp21
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=NAS] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0032153
"cell division site" evidence=IDA] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPCC1672.07
GO:GO:0005829 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672 GO:GO:0032153
GO:GO:0044732 eggNOG:COG2319 GO:GO:0006364 GO:GO:0032040
GO:GO:0005732 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
OrthoDB:EOG46T68Q PIR:T41051 RefSeq:NP_587878.1
ProteinModelPortal:O14053 STRING:O14053 EnsemblFungi:SPCC1672.07.1
GeneID:2539299 KEGG:spo:SPCC1672.07 NextBio:20800466 Uniprot:O14053
Length = 902
Score = 1297 (461.6 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 288/816 (35%), Positives = 451/816 (55%)
Query: 3 IFEPYKAIGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIRAL 62
I+ P+++IG+++++VPF ++ GT VT SVG F Y+C KLNL+ VG QL K+I L
Sbjct: 23 IYAPFRSIGHVSNAVPFDIEARGTHFLVTTSVGNTFQTYDCEKLNLLFVGKQLDKEITCL 82
Query: 63 ASYRDYTFAAYGNHIAVVKRAHQVATWS----RHSAKVNLLLLFGEHILSIDIDGNMFIW 118
S++D+ A G+ I KR + W + V L FGE I++ ++++W
Sbjct: 83 KSFKDFMLVAAGSKIFAYKRGKII--WDIDVEQEHGTVTHLDAFGEWIIACTSSRHVYVW 140
Query: 119 AFKGIEENLAPVGHVKL--DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
K + P H + T ++HP TYLNK+++G +G+LQ+WN+ K+++E
Sbjct: 141 --KHASKYSVPELHTTFLPNTNADITSLLHPSTYLNKILLGFSDGALQIWNLRVSKRVHE 198
Query: 177 FKGW-GXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD 235
F+ + G P LDV+AVG G+I + N++ L+ F G V + +F +D
Sbjct: 199 FQEFFGDGITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILMEFKQD--GQVLSCSFRTD 256
Query: 236 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
G P+LAS G +S W+L KRR+Q+V AH ++ + F +P+L++A DNS+K W
Sbjct: 257 GTPILASSNPIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILVTAGPDNSLKEW 316
Query: 296 IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL-SAGQDRAFRLFSVIQDQQSRELSQ 354
IFD+ DG PR+LR R+GH PP ++FY H L SA DR+ R S+ QD QS ELSQ
Sbjct: 317 IFDSMDGAPRILRSRNGHYEPPSFVKFYGKSVHFLISAATDRSLRAVSLYQDSQSTELSQ 376
Query: 355 RHVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGE 414
V +A+ + A + RE+ W NV+T H + + A W ++ LG+
Sbjct: 377 GSVISKAKKLNVRPEELKLPEITALSSSNTREKYWDNVLTAHKNDSSARTWNWKSKTLGQ 436
Query: 415 HILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHN 474
H+L P + T+V++ +S CGNF ++G++ G ++ +N+QSGI R S+ S S
Sbjct: 437 HVL-PTSDG-TSVRSVCVSCCGNFGLIGSSKGVVDVYNMQSGIKRKSF-GQSSLSGKP-- 491
Query: 475 GEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVA 534
V V D+ N ++++A G +K WDF +L +VG S+ +Y + L+A
Sbjct: 492 --VTAVMLDNVNRILVTASLDGILKFWDFNKGNLIDSLDVGSSITHAIYQHSSDLVAVAC 549
Query: 535 DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDA 594
DD IR+ DV ++VR+ GH++R+T F FS+ G+WL+++ +DG++R WD+ ID+
Sbjct: 550 DDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLIDS 609
Query: 595 IHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASG-KEIVSVKMP 653
I T+L+ +P D LAT HVDQ G+ LW N MF ++ + A ++V V P
Sbjct: 610 ISTPSVCTSLTFAPTGDYLATTHVDQVGISLWTNLSMFK---HVSTKALRLDDVVEVSAP 666
Query: 654 SVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLINLDI 713
SVS +G ++ +V ++ ++ T Q P+L TLS LP++QWQ+LINL+
Sbjct: 667 SVSGEKGISVVEAAL-NVE-SNAEDEEDISYRTMDQLDPNLQTLSKLPRTQWQTLINLEA 724
Query: 714 IKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIPVSQ 773
IKARN APFFLPS+ S + K +T+ + K + ++
Sbjct: 725 IKARNAPKEVPKVPEKAPFFLPSLKDQSEATVPKQPIATEISKPTAVASIK----VSGTE 780
Query: 774 FIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 809
F LLH + AF +Y+KSL P+ +D+E+R L
Sbjct: 781 FSTLLHG----NDDDAFFEYLKSLGPAKIDLEIRSL 812
Score = 126 (49.4 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 45/168 (26%), Positives = 75/168 (44%)
Query: 730 APFFLPSVPSLSGEILFKPSESTKEDTESLKVGNK-TKP----DIPVS--QFIQLLHSCA 782
AP +P VP + L + ++ + + +KP I VS +F LLH
Sbjct: 730 APKEVPKVPEKAPFFLPSLKDQSEATVPKQPIATEISKPTAVASIKVSGTEFSTLLHG-- 787
Query: 783 EMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISC 842
+ AF +Y+KSL P+ +D+E+R LD P Y L ++ + +S
Sbjct: 788 --NDDDAFFEYLKSLGPAKIDLEIR-----------SLDAYPPYEEFILFINIMTRRLSK 834
Query: 843 RNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLEVQSAVWQKIDK 890
R +FE +QA + +F K H + + H +D + E A W+ + K
Sbjct: 835 RRDFELVQACMSVFTKSHEDVLLMHDTPEDTV-PVFESLKA-WESVHK 880
>UNIPROTKB|G3X6I6 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GeneTree:ENSGT00390000004976 OMA:DGIIACH
EMBL:DAAA02029634 Ensembl:ENSBTAT00000007218 Uniprot:G3X6I6
Length = 948
Score = 1351 (480.6 bits), Expect = 5.1e-138, P = 5.1e-138
Identities = 301/820 (36%), Positives = 455/820 (55%)
Query: 3 IFEPYKAIGYITSSVPFSVQ--RLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
+F ++A+G +S +P +V+ L +VT VGK+FH Y+ KL+LV V LP+ I
Sbjct: 65 LFAGFRALGLFSSDIPHAVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSLPQDIC 124
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVA-TWSRHSAKVNLLLLFGEHILSIDIDGNMFIWA 119
+A+ FAAYGN + R +V T+ H A+++LL FG+H++S+D D + IW
Sbjct: 125 CMAADGRLVFAAYGNVFSAFARNKEVVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWH 184
Query: 120 FKGIEENLAPVGHVKLDDK-FTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFK 178
EE L + D F + I+HP TYLNK+++GS++GSLQLWN+ + K LY F
Sbjct: 185 IYSEEEYL----QLPFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNKLLYTFA 240
Query: 179 GWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAF-SSDGQ 237
GW PA+DVVAVG G++ +HN+++DE L+ F G +T+++F ++DG
Sbjct: 241 GWKVGVTALQQAPAVDVVAVGLMSGQVIIHNIKFDETLMKFRQDW-GPITSISFRTADGH 299
Query: 238 PLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIF 297
P++A+G+ G I +W+LE ++L + +R AH AI L F EP+L++ ADN++++WIF
Sbjct: 300 PVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNGADNALRIWIF 359
Query: 298 DTTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
D G+ RLLRFR GHSAP IR+Y NG+HILSA QD + FS + ++ ++ L
Sbjct: 360 DGPAGEGRLLRFRMGHSAPLTRIRYYGQNGQHILSASQDGTLQSFSTVHEKFNKSLGHGL 419
Query: 357 VAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGE 414
+ K+ R PV F E RE DW +V CH W Q +G
Sbjct: 420 INKKRVKRKGLQNTMSVRLPPVTEFAAEEARESDWDGIVACHQGKLSCSTWNYQRSTIGA 479
Query: 415 HILRPC--PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYA 472
H LRP + T A I++CGNFAV+G + G ++ +N+QSGI RGS+ + A
Sbjct: 480 HFLRPAGLKTDSTTATAVDITSCGNFAVIGLSSGAVDVYNMQSGIHRGSF-----GRDQA 534
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H G V GVA D N L I+AG G +K W+FK + L + S ++ HR +G+L
Sbjct: 535 HKGSVRGVAVDGLNQLTITAGSEGVLKFWNFKNKVLIHSVSLDSSPNLMLLHRDSGILGL 594
Query: 533 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQI 592
DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD S+R WD+ I
Sbjct: 595 ALDDFSISVLDIETRKIVREFSGHQGQINDMTFSPDGRWLISASMDCSIRTWDLPSGCLI 654
Query: 593 DAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKM 652
D+ +D + +++SP D LAT+HVD GVYLW N ++S S + + + +
Sbjct: 655 DSFLLDSAPLNVTMSPTGDFLATSHVDHLGVYLWSNISLYS-------VVSLRPLPTDYV 707
Query: 653 PSVSSVEG-CQ--DENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLI 709
PSV + G CQ D S+ V ++ + + + P +Q LVTLSLLP+S+W++L+
Sbjct: 708 PSVVMLPGTCQTQDVELSEETVEPSEEMIE--YDSP--EQLNEQLVTLSLLPESRWKNLL 763
Query: 710 NLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDI 769
NLD+IK +N APFF+P++P L + + ++ + +G +
Sbjct: 764 NLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNNDPQQSKVVNLGILAQK-- 821
Query: 770 PVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 809
S F L + A + +K L PS ++ ELR L
Sbjct: 822 --SDFCLKLEEGLVNNKYEAAVNLLKELGPSGIETELRSL 859
Score = 221 (82.9 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 73/276 (26%), Positives = 128/276 (46%)
Query: 636 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP 692
SNI Y+ S + + + +PSV + G CQ ++ + T ++ + +Q
Sbjct: 689 SNISLYSVVSLRPLPTDYVPSVVMLPGTCQTQDVELSE--ETVEPSEEMIEYDSPEQLNE 746
Query: 693 DLVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSEST 752
LVTLSLLP+S+W++L+NLD+IK +N APFF+P++P L +
Sbjct: 747 QLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNND 806
Query: 753 KEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQII 812
+ ++ + +G + S F L + A + +K L PS ++ ELR L
Sbjct: 807 PQQSKVVNLGILAQK----SDFCLKLEEGLVNNKYEAAVNLLKELGPSGIETELRSLS-- 860
Query: 813 DHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQ 871
D + +L I +LD + +FE QA + LFLK+H +T+ L
Sbjct: 861 -PDCGGSVGIMKSFLKMIGTMLDR-------KRDFELAQAYLALFLKLHLKTLPSEPVLL 912
Query: 872 DKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 907
++ KL W + +F + CV++++ ++ L
Sbjct: 913 EEMTKLSSQLEENWIHLQLLFNQSLCVLNYIKSALL 948
>UNIPROTKB|F1NKR5 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003824 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
SUPFAM:SSF50952 GeneTree:ENSGT00390000004976 OMA:DGIIACH
EMBL:AADN02056073 EMBL:AADN02056074 EMBL:AADN02056075
EMBL:AADN02056076 EMBL:AADN02056077 EMBL:AADN02056078
IPI:IPI00599626 ProteinModelPortal:F1NKR5
Ensembl:ENSGALT00000000326 Uniprot:F1NKR5
Length = 890
Score = 1347 (479.2 bits), Expect = 1.3e-137, P = 1.3e-137
Identities = 299/821 (36%), Positives = 456/821 (55%)
Query: 3 IFEPYKAIGYITSSVPFSVQRLGT--ENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
+F ++A+G +S VP ++ G E +V +VG++ H YN KL +V V L + I
Sbjct: 8 LFAGFRALGRYSSHVPHVLRYHGRPREFYVATAVGRSVHTYNVKKLGIVAVSNALLQDIT 67
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVA-TWSRHSAKVNLLLLFGEHILSIDIDGNMFIWA 119
LA+ R FA+YGN + R +V T+ H A+++LL FG+HI+S+D+ + +W
Sbjct: 68 CLAADRMLIFASYGNVFHAIARNKEVVHTYEGHKARIHLLQPFGDHIISVDVANVLIVWD 127
Query: 120 FKGIEENLAPVGHVKLDDK-FTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFK 178
+ EE L V D F + I+HP TYLNK+++GS++G LQLWNI + K LY F
Sbjct: 128 IQSEEEYL----QVVFDKATFAVSAILHPSTYLNKILLGSEQGGLQLWNIRSNKLLYSFP 183
Query: 179 GWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQP 238
GWG PA+DV+AVG G I +HN+++DE L+ F G +TA++F +DG P
Sbjct: 184 GWGLGVTTLAQAPAVDVIAVGLVSGHIIIHNIKFDETLMKFQQDW-GPITAISFRTDGHP 242
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
++A+G+ G I++W+LE+++L S +R AH A+ + F EP+L++ ADN+I++WIFD
Sbjct: 243 VMAAGSPVGHIALWDLEEKKLMSQMRNAHSTAVAGMSFVPGEPLLITNGADNAIRVWIFD 302
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
G R+LR R GHSAPP IR++ NG ILSAGQD + FS + ++ ++ L + +
Sbjct: 303 GPGGTGRVLRSRMGHSAPPTKIRYHGQNGEQILSAGQDGTLQSFSTVHERFNKSLGRGSI 362
Query: 358 -AKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHI 416
K+++ P+ AF + DW ++ CH W Q +G H
Sbjct: 363 NKKKSKKKGLQHDTMALPPITAFASEVAHQNDWDGIIACHQGYITCTTWNYQKTSMGAHK 422
Query: 417 LRP---CPENPTAVKACT--ISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNY 471
LRP P + A I+ CGNFAV+G + G ++ +N+QSGI RG Y E+
Sbjct: 423 LRPEEFSKNKPIDIYATAVDITTCGNFAVIGMSTGQVDVYNMQSGIHRGRY--GREK--- 477
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLA 531
AH G + GVA D N L I+AG G IK W FK +DL ++ S I+ HR +G+L
Sbjct: 478 AHEGSIRGVAVDGLNQLTITAGSDGLIKFWKFKAKDLVHSTDLSSSPSGILLHRDSGILG 537
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
DD I + D+ ++VRKF GH RI D FS DG+WL++S MD +++ WD+
Sbjct: 538 IAFDDFSISVLDIETWKIVRKFSGHHGRINDMTFSPDGRWLITSSMDCTIKTWDLPSGCL 597
Query: 592 IDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVK 651
ID +D + +L++SP D LA+AHVD G+YLW NR ++S S + + +
Sbjct: 598 IDCFLLDSAAVSLTMSPTGDFLASAHVDDLGIYLWSNRSIYS-------LVSLRPLPADY 650
Query: 652 MPSVSSVEG-C--QDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSL 708
PSV ++ G C QD + ++ + + + DS P +Q LVTLSLLP+S+W++L
Sbjct: 651 EPSVITLPGTCPLQDVDVAEGEDKCDEMIEYDS---P--EQLGEQLVTLSLLPESRWKNL 705
Query: 709 INLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPD 768
++LD+IK +N APFF+P+VP L P + ++ + +G +
Sbjct: 706 LSLDVIKKKNKPREPPKVPTSAPFFIPTVPGLIPRYA-APEQDNDTQSKVVNIGVLAQK- 763
Query: 769 IPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 809
S F L ++A + +K L PS +++ELR L
Sbjct: 764 ---SDFYVHLEEALSTNEYTAPLNLLKDLGPSNIEIELRSL 801
Score = 216 (81.1 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 57/214 (26%), Positives = 106/214 (49%)
Query: 694 LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTK 753
LVTLSLLP+S+W++L++LD+IK +N APFF+P+VP L P +
Sbjct: 691 LVTLSLLPESRWKNLLSLDVIKKKNKPREPPKVPTSAPFFIPTVPGLIPRYA-APEQDND 749
Query: 754 EDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIID 813
++ + +G + S F L ++A + +K L PS +++ELR L
Sbjct: 750 TQSKVVNIGVLAQK----SDFYVHLEEALSTNEYTAPLNLLKDLGPSNIEIELRSLA--- 802
Query: 814 HDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDK 873
+ L+ +L ++ ++++ + NFE QA + LFLK+H + + L ++
Sbjct: 803 PEGGGSLEVMLSFLR---MIGMMLNK---KYNFEIAQAYLALFLKLHLKIISSEPSLLEE 856
Query: 874 ARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 907
L + W + +F + CV++++ ++ L
Sbjct: 857 ISVLSKQLEETWIHLRSLFNQSLCVLTYMKSALL 890
>UNIPROTKB|F1RLI4 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 OMA:DGIIACH EMBL:CU972447
Ensembl:ENSSSCT00000015514 Uniprot:F1RLI4
Length = 952
Score = 1332 (473.9 bits), Expect = 5.2e-136, P = 5.2e-136
Identities = 301/845 (35%), Positives = 460/845 (54%)
Query: 3 IFEPYKAIGYITSSVPFSVQ--RLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
+F ++A+G ++ +P V+ L FVT VGK+ H Y+ KL+LV V LP+ I
Sbjct: 69 LFAGFRALGLFSNDIPHVVRFSALKRRFFVTTCVGKSLHTYDVQKLSLVAVSNSLPQDIC 128
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVA-TWSRHSAKVNLLLLFGEHILSIDIDGNMFIWA 119
+A+ FAAYGN + R +V T+ H A+++LL FG+H++S+D D + IW
Sbjct: 129 CMAADGRLVFAAYGNVFSAFARNKEVVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWH 188
Query: 120 FKGIEENLAPVGHVKLDDK-FTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFK 178
EE L + D F + I+HP TYLNK+++GS++GSLQLWN+ + K LY F
Sbjct: 189 IYSEEEYL----QLSFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNKLLYTFA 244
Query: 179 GWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQP 238
GW PA+DVVAVG G++ +HN+++DE L+ F G +T+++F +DG P
Sbjct: 245 GWKTGVTALQQAPAVDVVAVGLMSGQVIIHNIKFDETLMKFRQDW-GPITSISFRTDGHP 303
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
++A+G+ G I +W+LE ++L + +R AH AI L F EP+L++ ADN++++WIFD
Sbjct: 304 VMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNGADNALRIWIFD 363
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
G+ RLLRFR GHSAP IR+Y NG+ ILSA QD + FS I ++ ++ L +
Sbjct: 364 GPTGEGRLLRFRMGHSAPLTKIRYYGQNGQQILSASQDGTLQSFSTIHEKFNKSLGHGLI 423
Query: 358 AKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEH 415
K+ R P+ F E RE DW ++ CH W Q +G +
Sbjct: 424 NKKRVKRKGLQNAMTVRLPPITEFAAEEARESDWDGIIACHQGKLSCSTWNYQRSTIGAY 483
Query: 416 ILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAH 473
L+P ++ A I++CGNFAV+G + G I+ +N+QSGI RGS+ + AH
Sbjct: 484 FLKPKELKKDDITATAVDITSCGNFAVIGLSSGTIDVYNMQSGIHRGSF-----GKDQAH 538
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHR-VNGLLAT 532
G + GVA D N L ISAG G +K W+FK + L + S ++ HR +G+L
Sbjct: 539 KGSIRGVAVDGLNQLTISAGSEGLLKFWNFKNKILIHSVSLDSSPNMMLLHRDSSGILGL 598
Query: 533 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQI 592
DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD S+R WD+ I
Sbjct: 599 ALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISASMDCSIRTWDLPSGCLI 658
Query: 593 DAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKM 652
D+ +D + +++SP D LAT+HVD G+YLW N ++S S + + + +
Sbjct: 659 DSFLLDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYS-------VVSLRPLPTDYV 711
Query: 653 PSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPD-LVTLSLLPKSQWQSLIN 710
PSV + G CQ ++ + T+ P D +Q+ + LVTLSLLP+S+W++L+N
Sbjct: 712 PSVVMLPGTCQTQDIELSE-ETTE--PSDEMIAYDSPEQLNEQLVTLSLLPESRWKNLLN 768
Query: 711 LDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIP 770
LD+IK +N APFF+P+VP L + + ++ + +G +
Sbjct: 769 LDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYATPEQNNDPQQSKVVNLGILAQK--- 825
Query: 771 VSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLS-I 829
S F L + A +K L PS ++ ELR L D ++ +L I
Sbjct: 826 -SDFCLKLEEGLVNNKYEAALSLLKELGPSGIETELRSLS---PDCGGSIEVMKSFLKMI 881
Query: 830 ELLLD 834
E++LD
Sbjct: 882 EMMLD 886
Score = 240 (89.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 76/277 (27%), Positives = 131/277 (47%)
Query: 636 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP 692
SNI Y+ S + + + +PSV + G CQ ++ + T+ P D +Q+
Sbjct: 693 SNISLYSVVSLRPLPTDYVPSVVMLPGTCQTQDIELSE-ETTE--PSDEMIAYDSPEQLN 749
Query: 693 D-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSES 751
+ LVTLSLLP+S+W++L+NLD+IK +N APFF+P+VP L +
Sbjct: 750 EQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYATPEQNN 809
Query: 752 TKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQI 811
+ ++ + +G + S F L + A +K L PS ++ ELR L
Sbjct: 810 DPQQSKVVNLGILAQK----SDFCLKLEEGLVNNKYEAALSLLKELGPSGIETELRSLS- 864
Query: 812 IDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKL 870
D ++ +L IE++LD + +FE QA + LFLK+H + + L
Sbjct: 865 --PDCGGSIEVMKSFLKMIEMMLDR-------KRDFELAQAYLALFLKLHLKMLPSEPVL 915
Query: 871 QDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 907
++ KL W + +F + CV++++ ++ L
Sbjct: 916 LEEVTKLSSQLEETWIHLQSLFNQSMCVLNYIKSALL 952
Score = 41 (19.5 bits), Expect = 3.3e-15, Sum P(2) = 3.3e-15
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 394 TCHMDTAQAYVWRLQNFVLGEHILRP 419
+C D+ +++ W+L+ LG LRP
Sbjct: 2 SCTEDSLRSHDWQLEPEALGS--LRP 25
>UNIPROTKB|F1PNT8 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 KO:K14554 OMA:DGIIACH CTD:134430
EMBL:AAEX03001970 RefSeq:XP_545992.2 ProteinModelPortal:F1PNT8
Ensembl:ENSCAFT00000011832 GeneID:488875 KEGG:cfa:488875
Uniprot:F1PNT8
Length = 891
Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
Identities = 293/819 (35%), Positives = 453/819 (55%)
Query: 3 IFEPYKAIGYITSSVPFSVQ--RLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
+F ++A+G ++ V ++ L FVT K+FH Y+ KL+LV V LP+ I
Sbjct: 9 LFAGFRALGLFSTDVAHVLRFSALKPRFFVTTCGAKSFHTYDVQKLSLVAVSNSLPQDIC 68
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVA-TWSRHSAKVNLLLLFGEHILSIDIDGNMFIWA 119
+A+ FAAYGN + R +V T+ H A++ LL FG+H++S+D D + IW
Sbjct: 69 CMAADGRLVFAAYGNVFSAFARNKEVVHTYKGHKAEIRLLQPFGDHVISVDTDSVLIIWH 128
Query: 120 FKGIEENLAPVGHVKLDDK-FTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFK 178
EE L + D F + I+HP TYLNK+++GS++G+LQLWNI + K LY F+
Sbjct: 129 IYSEEEYL----QLTFDKSVFKISAILHPSTYLNKILLGSEQGTLQLWNIKSNKLLYTFQ 184
Query: 179 GWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQP 238
GW PA+DVVAVG + G++ +HN+++DE L+ F G +T+++F +DG P
Sbjct: 185 GWKFGVTALQQAPAVDVVAVGLTSGQVIIHNIKFDETLMKFRQDW-GPITSISFRTDGHP 243
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
++A+G+ G I +W+LE ++L + +R AH AI L F EP+L++ ADN++++WIFD
Sbjct: 244 IMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNGADNALRIWIFD 303
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
G+ RLLRFR GHSAP IR+Y NG+ ILSA QD + FS I ++ ++ L +
Sbjct: 304 GPTGEGRLLRFRMGHSAPLTKIRYYGQNGQQILSASQDGTLQSFSTIHEKFNKSLGHGLI 363
Query: 358 AKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEH 415
K+ R P+ F E RE DW +++ CH W Q +G +
Sbjct: 364 NKKKVKRKGLQNAMSVRLPPITKFAAEEARESDWDSIIACHQGKLSCSTWNYQRSTIGAY 423
Query: 416 ILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAH 473
L+P ++ A I++CGNFAV+G + G ++ +N+QSGI RGS+ + + AH
Sbjct: 424 FLKPKELKKDDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHRGSFGE-----DQAH 478
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATV 533
G V GVA D N L+I+AG G +K W+FK + L + S ++ HR +G+L
Sbjct: 479 KGSVRGVAVDGLNQLIITAGSEGLLKFWNFKNKILIHSMSLSSSPNMMLLHRDSGILGLA 538
Query: 534 ADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 593
DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD S+R WD+ ID
Sbjct: 539 LDDFSICVLDIETRKIVREFSGHQGQINDLAFSPDGRWLISASMDCSVRTWDLPSGCLID 598
Query: 594 AIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 653
+ VD + +++SP D LAT+HVD G+YLW N ++S S + + + +P
Sbjct: 599 SFLVDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYS-------VVSLRPLPTDYVP 651
Query: 654 SVSSVEG-CQDENS--SQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLIN 710
V + G CQ+E+ S+ + +D + + + P +Q LVTLSLLP+S+W++L+N
Sbjct: 652 LVVMLPGTCQNEDVEFSEETIEPSDEMIE--YDSP--EQLNEQLVTLSLLPESRWKNLLN 707
Query: 711 LDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIP 770
LD+IK +N APFF+P+VP L + ++ + +G +
Sbjct: 708 LDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYAVPEQNNDPHQSKVVNLGVLAQK--- 764
Query: 771 VSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 809
S F L + A + +K L PS ++ ELR L
Sbjct: 765 -SDFCLKLEEGLVNNKYEAALNLLKELGPSGIETELRSL 802
Score = 225 (84.3 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 76/279 (27%), Positives = 130/279 (46%)
Query: 636 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRV--PKDSFGLPTFKQQ 690
SNI Y+ S + + + +P V + G CQ+E DV ++ P D +Q
Sbjct: 632 SNISLYSVVSLRPLPTDYVPLVVMLPGTCQNE-----DVEFSEETIEPSDEMIEYDSPEQ 686
Query: 691 IPD-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPS 749
+ + LVTLSLLP+S+W++L+NLD+IK +N APFF+P+VP L
Sbjct: 687 LNEQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTVPGLVPRYAVPEQ 746
Query: 750 ESTKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 809
+ ++ + +G + S F L + A + +K L PS ++ ELR L
Sbjct: 747 NNDPHQSKVVNLGVLAQK----SDFCLKLEEGLVNNKYEAALNLLKELGPSGIETELRSL 802
Query: 810 QIIDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHT 868
D +D +L I ++LD + +FE QA + LFLK+H + +
Sbjct: 803 S---PDCGGSVDIMQSFLKMIGIMLDK-------KRDFELAQAYLALFLKLHLKMLPSEP 852
Query: 869 KLQDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 907
L ++ KL W + +F + C+++++ ++ L
Sbjct: 853 VLLEEITKLSSQVEENWIHLQSLFNQSMCILNYIKSALL 891
>UNIPROTKB|Q8NI36 [details] [associations]
symbol:WDR36 "WD repeat-containing protein 36" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 GO:GO:0050896
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH EMBL:AF385437
EMBL:BC133025 EMBL:BC136517 EMBL:AK095312 IPI:IPI00169325
RefSeq:NP_644810.1 UniGene:Hs.533237 ProteinModelPortal:Q8NI36
SMR:Q8NI36 IntAct:Q8NI36 STRING:Q8NI36 PhosphoSite:Q8NI36
DMDM:46577504 PaxDb:Q8NI36 PeptideAtlas:Q8NI36 PRIDE:Q8NI36
Ensembl:ENST00000506538 Ensembl:ENST00000513710 GeneID:134430
KEGG:hsa:134430 UCSC:uc003kpd.3 CTD:134430 GeneCards:GC05P110427
HGNC:HGNC:30696 HPA:HPA037797 MIM:609669 MIM:609887
neXtProt:NX_Q8NI36 Orphanet:359 PharmGKB:PA134933637
HOVERGEN:HBG059718 InParanoid:Q8NI36 PhylomeDB:Q8NI36
GenomeRNAi:134430 NextBio:83377 ArrayExpress:Q8NI36 Bgee:Q8NI36
CleanEx:HS_WDR36 Genevestigator:Q8NI36 GermOnline:ENSG00000134987
Uniprot:Q8NI36
Length = 951
Score = 1312 (466.9 bits), Expect = 6.9e-134, P = 6.9e-134
Identities = 287/819 (35%), Positives = 448/819 (54%)
Query: 3 IFEPYKAIGYITSSVPFSVQ--RLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
+F ++A+G ++ +P V+ L +VT VGK+FH Y+ KL+LV V +P+ I
Sbjct: 69 LFAGFRALGLFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSVPQDIC 128
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVA-TWSRHSAKVNLLLLFGEHILSIDIDGNMFIWA 119
+A+ FAAYGN + R ++ T+ H A+++ L FG+HI+S+D DG + IW
Sbjct: 129 CMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHFLQPFGDHIISVDTDGILIIWH 188
Query: 120 FKGIEENLAPVGHVKLDDK-FTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFK 178
EE L + D F + I+HP TYLNK+++GS++GSLQLWN+ + K LY F
Sbjct: 189 IYSEEEYL----QLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNKLLYTFP 244
Query: 179 GWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQP 238
GW PA+DVVA+G G++ +HN++++E L+ F G +T+++F +DG P
Sbjct: 245 GWKVGVTALQQAPAVDVVAIGLMSGQVIIHNIKFNETLMKFRQDW-GPITSISFRTDGHP 303
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
++A+G+ G I +W+LE ++L + +R AH AI L F EP+L++ ADN++++WIFD
Sbjct: 304 VMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNGADNALRIWIFD 363
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
G+ RLLRFR GHSAP IR+Y NG+ ILSA QD + FS + ++ ++ L +
Sbjct: 364 GPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQSFSTVHEKFNKSLGHGLI 423
Query: 358 AKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEH 415
K+ R P+ F E RE DW ++ CH W Q +G +
Sbjct: 424 NKKRVKRKGLQNTMSVRLPPITKFAAEEARESDWDGIIACHQGKLSCSTWNYQKSTIGAY 483
Query: 416 ILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAH 473
L+P ++ A I++CGNFAV+G + G ++ +N+QSGI RGS+ + AH
Sbjct: 484 FLKPKELKKDDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHRGSF-----GKDQAH 538
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATV 533
G V GVA D N L ++ G G +K W+FK + L + S ++ HR +G+L
Sbjct: 539 KGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKNKILIHSVSLSSSPNIMLLHRDSGILGLA 598
Query: 534 ADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 593
DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD S+R WD+ ID
Sbjct: 599 LDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCSIRTWDLPSGCLID 658
Query: 594 AIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 653
+D + +S+SP D LAT+HVD G+YLW N ++S S + + + +P
Sbjct: 659 CFLLDSAPLNVSMSPTGDFLATSHVDHLGIYLWSNISLYS-------VVSLRPLPADYVP 711
Query: 654 SVSSVEG-CQ--DENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLIN 710
S+ + G CQ D S+ V +D + + + P +Q LVTLSLLP+S+W++L+N
Sbjct: 712 SIVMLPGTCQTQDVEVSEETVEPSDELIE--YDSP--EQLNEQLVTLSLLPESRWKNLLN 767
Query: 711 LDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIP 770
LD+IK +N APFF+P++P L + + ++ + +G +
Sbjct: 768 LDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNNDPQQSKVVNLGVLAQK--- 824
Query: 771 VSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 809
S F L + + +K PS ++ ELR L
Sbjct: 825 -SDFCLKLEEGLVNNKYDTALNLLKESGPSGIETELRSL 862
Score = 214 (80.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 70/277 (25%), Positives = 127/277 (45%)
Query: 636 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP 692
SNI Y+ S + + + +PS+ + G CQ ++ +V P D +Q+
Sbjct: 692 SNISLYSVVSLRPLPADYVPSIVMLPGTCQTQDV---EVSEETVEPSDELIEYDSPEQLN 748
Query: 693 D-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSES 751
+ LVTLSLLP+S+W++L+NLD+IK +N APFF+P++P L +
Sbjct: 749 EQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPKSAPFFIPTIPGLVPRYAAPEQNN 808
Query: 752 TKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQI 811
+ ++ + +G + S F L + + +K PS ++ ELR L
Sbjct: 809 DPQQSKVVNLGVLAQK----SDFCLKLEEGLVNNKYDTALNLLKESGPSGIETELRSLS- 863
Query: 812 IDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKL 870
D ++ +L I ++LD + +FE QA + LFLK+H + + L
Sbjct: 864 --PDCGGSIEVMQSFLKMIGMMLDR-------KRDFELAQAYLALFLKLHLKMLPSEPVL 914
Query: 871 QDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNSQL 907
++ L W + +F + C++++L ++ L
Sbjct: 915 LEEITNLSSQVEENWTHLQSLFNQSMCILNYLKSALL 951
>RGD|1586463 [details] [associations]
symbol:Wdr36 "WD repeat domain 36" species:10116 "Rattus
norvegicus" [GO:0001895 "retina homeostasis" evidence=ISO]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0030516 "regulation
of axon extension" evidence=ISO] [GO:0032040 "small-subunit
processome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:1586463
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GeneTree:ENSGT00390000004976 IPI:IPI00766595
PRIDE:F1MA04 Ensembl:ENSRNOT00000031530 Uniprot:F1MA04
Length = 882
Score = 1307 (465.1 bits), Expect = 2.3e-133, P = 2.3e-133
Identities = 297/845 (35%), Positives = 460/845 (54%)
Query: 3 IFEPYKAIGYITSSVPFSVQ--RLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
+F ++A+G ++ +P V+ L +VT VGK+FH Y+ KL+LV V +P+ I
Sbjct: 15 LFAGFRALGLFSNDIPHVVRYNALKRRFYVTTCVGKSFHTYDVQKLSLVAVSNSVPQDIC 74
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVA-TWSRHSAKVNLLLLFGEHILSIDIDGNMFIWA 119
+A+ FAAYGN + R ++ T+ H A+++LL FG+H++S+D D + IW
Sbjct: 75 CMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWH 134
Query: 120 FKGIEENLAPVGHVKLDDK-FTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFK 178
EE L + D F + I+HP TYLNKV++GS++GSLQLWNI + K LY F
Sbjct: 135 IYSEEEYL----QLTFDKSVFKISTILHPSTYLNKVLLGSEQGSLQLWNIKSNKLLYTFP 190
Query: 179 GWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQP 238
GW PA+DVVA+G G++ +HN+++DE L+ F H G +T+++F +DG P
Sbjct: 191 GWKVGVTALQQAPAVDVVAIGLVSGQVVIHNIKFDETLMKF-HQDWGPITSISFRTDGHP 249
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
++A+G+ G I +W+LE ++L + +R AH AI L F EP+L++ ADN++++WIFD
Sbjct: 250 IMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAISGLTFLHREPLLVTNGADNALRIWIFD 309
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
G+ RLLR R GHSA IR+Y NG+ ILSA QD + FS + ++ ++ L V
Sbjct: 310 GPTGEGRLLRLRMGHSASLTKIRYYGQNGQQILSASQDGTLQSFSTVHEKFNKSLGHGLV 369
Query: 358 AKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEH 415
K+ R P+ F E R+ DW V+ CH W Q +G +
Sbjct: 370 NKKIVKRKGLQNTMSVRLPPITQFAAEEARQSDWDGVIACHQGKLSCSTWNYQRSTIGAY 429
Query: 416 ILRP--CPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAH 473
L+P N A I++CGNFA++G + G ++ +N+QSGI RGS+ D E+ AH
Sbjct: 430 FLKPKNVKANSATATAVDITSCGNFAIIGLSSGAVDVYNMQSGIHRGSFGD--EK---AH 484
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATV 533
G V GVA D N L I+AG +K W+FK + L + ++ HR +G+L
Sbjct: 485 AGSVRGVAVDGLNQLAITAGSERLLKFWNFKSKVLVHSLSLDSPPNVMLLHRDSGILGLA 544
Query: 534 ADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 593
DD I + D+ ++VR+F GH +I D FS DG+WL+S+ MD S+R WD+ ID
Sbjct: 545 LDDFSITVLDIETRKIVREFSGHQGQINDMTFSPDGRWLISAAMDCSVRTWDLPSGCLID 604
Query: 594 AIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 653
+D + +++SP D LAT+HVD G+YLW N ++S S + + +P
Sbjct: 605 CFLLDSAPLNVTMSPTGDFLATSHVDHLGIYLWSNISLYS-------VVSLRPLPPDYVP 657
Query: 654 SVSSVEG-CQDEN--SSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLIN 710
SV + G CQ + + + + +D + + + P +Q LVTLSLLP+S+W++L+N
Sbjct: 658 SVLMLPGTCQTQGLEALEEQIEPSDEMIE--YESP--EQLNEQLVTLSLLPESRWKNLLN 713
Query: 711 LDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIP 770
LD+IK +N APFF+P+VP L S + ++ + +G +
Sbjct: 714 LDVIKKKNKPKEPPKVPQSAPFFIPTVPGLVPRFAVPEPTSDPQQSKVVNLGILAQK--- 770
Query: 771 VSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLS-I 829
S F L + + + +K L PS ++ ELR L +D ++ +LS I
Sbjct: 771 -SNFYLKLEEGLQNNQYEGALNLLKELGPSGIETELRNLS---PEDGGSIEAMRSFLSMI 826
Query: 830 ELLLD 834
++LD
Sbjct: 827 GVMLD 831
Score = 196 (74.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 67/231 (29%), Positives = 111/231 (48%)
Query: 636 SNIDSYA--SGKEIVSVKMPSVSSVEG-CQDENSSQPDVHRTDRV-PKDSFGLPTFKQQI 691
SNI Y+ S + + +PSV + G CQ + + +++ P D +Q+
Sbjct: 638 SNISLYSVVSLRPLPPDYVPSVLMLPGTCQTQGLEALE----EQIEPSDEMIEYESPEQL 693
Query: 692 PD-LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSE 750
+ LVTLSLLP+S+W++L+NLD+IK +N APFF+P+VP L
Sbjct: 694 NEQLVTLSLLPESRWKNLLNLDVIKKKNKPKEPPKVPQSAPFFIPTVPGLVPRFAVPEPT 753
Query: 751 STKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQ 810
S + ++ + +G + S F L + + + +K L PS ++ ELR L
Sbjct: 754 SDPQQSKVVNLGILAQK----SNFYLKLEEGLQNNQYEGALNLLKELGPSGIETELRNLS 809
Query: 811 IIDHDDHQELDKRPEYLS-IELLLDYLIHEISCRNNFEFIQAVIRLFLKIH 860
+D ++ +LS I ++LD + +FE QA + LFLK+H
Sbjct: 810 ---PEDGGSIEAMRSFLSMIGVMLDR-------KRDFELAQAYLALFLKLH 850
>ZFIN|ZDB-GENE-030131-464 [details] [associations]
symbol:wdr36 "WD repeat domain 36" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA;IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-464
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 HOVERGEN:HBG059718 EMBL:BC164036
IPI:IPI00481400 UniGene:Dr.4799 ProteinModelPortal:B5DDC5
STRING:B5DDC5 ArrayExpress:B5DDC5 Uniprot:B5DDC5
Length = 904
Score = 1288 (458.5 bits), Expect = 2.4e-131, P = 2.4e-131
Identities = 288/817 (35%), Positives = 444/817 (54%)
Query: 3 IFEPYKAIGYITSSVPFSVQ--RLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIR 60
IF ++A+G ++ + V+ + E +V +VG+ FH YN KL +V V LP+ I
Sbjct: 21 IFSGFRALGLYSNHLAHVVRFHKKHREFYVVTAVGQCFHTYNVKKLGIVAVSNALPEDIS 80
Query: 61 ALASYRDYTFAAYGNHIAVVKRAHQVA-TWSRHSAKVNLLLLFGEHILSIDIDGNMFIWA 119
++ + +AAYG I+ R+ +V T++ H A V+LLL FG H++S+D D + IW
Sbjct: 81 SVTADCMLVYAAYGKLISAFARSREVVHTYTGHQADVHLLLPFGNHLISVDKDNVVIIWD 140
Query: 120 FKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKG 179
+ E+ + + K F + +MHP TYLNK++ GS +GSLQLWNI + K L+ F G
Sbjct: 141 VES-EDTYLQISYDKAS--FEVSALMHPSTYLNKILFGSSQGSLQLWNIKSNKLLFTFSG 197
Query: 180 WGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPL 239
W PA+DVV VG + G+I +HN+++DE L+ F G +TAL+F +DG P+
Sbjct: 198 WSAAVTVLQQTPAVDVVGVGLASGQIIIHNIKFDETLMKFQQDW-GPITALSFRTDGHPI 256
Query: 240 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 299
+ASG+ G I +W+LE+++L S +R+AH AI L F NEP+L++ ADN+I++WIFD
Sbjct: 257 MASGSPIGHIGLWDLEEKKLVSQMRDAHTTAIAGLTFLQNEPLLITNGADNAIRVWIFDV 316
Query: 300 TDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
GD RLLR R GHSAPP IR Y +G +ILSAGQD + FS + ++ ++ L +
Sbjct: 317 AGGDGRLLRQRMGHSAPPTKIRHYDQSGLNILSAGQDGTLQSFSTVHERFNKSLGHGTLN 376
Query: 359 K-RARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHIL 417
K +A+ + F R+ DW ++ CH W Q +G H L
Sbjct: 377 KAKAKKKGVKYDTAKLPSITTFASETARQSDWDGIIACHRGFLMTTSWNYQKGSMGAHKL 436
Query: 418 RPCPENPTA-----VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYA 472
P N A IS+CGNFAV+ + G I+ +N+QSG+ RG Y + + A
Sbjct: 437 EPERFNRNRSLNVHATAVDISSCGNFAVIALSSGHIDVYNMQSGLHRGHYGE-----DKA 491
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H G V GVA D+ N L S G +K+W FK ++ + + + HR +G+LA
Sbjct: 492 HEGPVRGVAVDALNQLTFSVGADHLLKIWKFKSKEHLHTHRLPAAPASSLLHRDSGMLAI 551
Query: 533 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQI 592
D I + DV R+VRKF GH +I D FS DG+WL+++ MD ++R WD+ +
Sbjct: 552 ALDVFAIHILDVETRRIVRKFSGHRGQINDMTFSPDGRWLITASMDCTIRTWDLPSGSLV 611
Query: 593 DAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKM 652
D V+ + ++SLSP + LA++HVD GVYLW N + S S + + E + +
Sbjct: 612 DCFLVEAAAVSVSLSPTGNFLASSHVDGLGVYLWSNNTLCSLVS-LRPLPADYEPTVIML 670
Query: 653 PSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLINLD 712
P + C +++ + +V +D + P Q LVTLSLLP S+W++L++LD
Sbjct: 671 PGI-----CPSKDTEEEEVLDSDSSEMAEYISPA--QLDEHLVTLSLLPDSRWKNLLHLD 723
Query: 713 IIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIPVS 772
IIK +N APFF+P++P L + P+ ++ ++ + +G + S
Sbjct: 724 IIKKKNKPKEPPKVPKAAPFFIPTIPGLVPQFSL-PNTPSEAQSKVVNLGVLAQK----S 778
Query: 773 QFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRML 809
F L + E ++ ++ L PS ++ ELR L
Sbjct: 779 NFYIELENAIESNSYEEPVKLLRELGPSAIETELRAL 815
Score = 213 (80.0 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 62/256 (24%), Positives = 121/256 (47%)
Query: 653 PSVSSVEG-CQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSLLPKSQWQSLINL 711
P+V + G C +++ + +V +D + P Q LVTLSLLP S+W++L++L
Sbjct: 665 PTVIMLPGICPSKDTEEEEVLDSDSSEMAEYISPA--QLDEHLVTLSLLPDSRWKNLLHL 722
Query: 712 DIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKVGNKTKPDIPV 771
DIIK +N APFF+P++P L + P+ ++ ++ + +G +
Sbjct: 723 DIIKKKNKPKEPPKVPKAAPFFIPTIPGLVPQFSL-PNTPSEAQSKVVNLGVLAQK---- 777
Query: 772 SQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIEL 831
S F L + E ++ ++ L PS ++ ELR L D ++ +L +
Sbjct: 778 SNFYIELENAIESNSYEEPVKLLRELGPSAIETELRALS---PDMGGDVGVMKSFLKMIS 834
Query: 832 LLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLEVQSAVWQKIDKM 891
+ + + +F+ QA + LFLK+H + +L ++A ++ W I +
Sbjct: 835 CI------LKSKKDFDLAQAYLALFLKLHLRLISDEPELMEEAERVSAQLEETWMCIQTL 888
Query: 892 FQSARCVVSFLSNSQL 907
+ C++S++ ++ L
Sbjct: 889 LNQSICLLSYIKSALL 904
>FB|FBgn0038146 [details] [associations]
symbol:CG9799 species:7227 "Drosophila melanogaster"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040 EMBL:AY052114
ProteinModelPortal:Q960D6 SMR:Q960D6 STRING:Q960D6 PaxDb:Q960D6
PRIDE:Q960D6 FlyBase:FBgn0038146 InParanoid:Q960D6
OrthoDB:EOG4KD521 ArrayExpress:Q960D6 Bgee:Q960D6 Uniprot:Q960D6
Length = 922
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 294/925 (31%), Positives = 472/925 (51%)
Query: 3 IFEPYKAIGYITSSVPFS---VQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKI 59
IF +A+GY+++ VP VQR +T +G++F +Y L+ V P +I
Sbjct: 25 IFRRNRALGYVSNQVPAVTRYVQRRRDTLLITC-IGRSFQVYTANHFRLLHVSGLHPDEI 83
Query: 60 RALASYRDYTFAAYGNHIAVVKRA--HQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFI 117
ALA+ R +T+ A N RA H + H V+LLL FG +++ID + +
Sbjct: 84 TALATDRLHTYTA-SNKCIYAWRAGKHIRHVYRGHQKDVHLLLPFGSSLIAIDRQNVLKV 142
Query: 118 WAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEF 177
W E+ V ++F T + HP TY+NK+++GSQ+G L++ NI +
Sbjct: 143 WNIS-TEDVYLEVPF--RSEEFQITAVTHPPTYINKIVLGSQQGQLKILNIKKNSVVCTL 199
Query: 178 KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQ 237
PALDVVAVG DG I + N+++DE L++F G VT L+F +DG
Sbjct: 200 SHHDSRITCIEPSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQDW-GQVTNLSFRTDGP 258
Query: 238 PLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIF 297
P+L S S+G ++ WNLE+R+L + +AH+ ++ + +EPV+ + S DNS++M++F
Sbjct: 259 PILVSACSNGYMAFWNLEERKLAGQL-QAHEESVTTAICLPSEPVVFTTSPDNSMRMFVF 317
Query: 298 DTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
D DG R LR R GH+ PP CIR++ ++G ILS+G+D R+FS I + ++ + +
Sbjct: 318 DMPDGGARQLRIREGHTKPPFCIRYHGSSGVSILSSGEDSTMRVFSTISESLNKSMGRAT 377
Query: 357 VAKRA--RXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGE 414
+A + P++ F RE++W N+ H QA W +GE
Sbjct: 378 YNPKATKKKNRFEHDKFGMPPILEFTSDTAREKEWDNIAAIHAGVIQATTWSFGKNRMGE 437
Query: 415 HILRPCP---ENPTAVK---ACTI-SACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSE 467
H L P N T + C + + CGNF ++G + G IERFN+QSG+ R +Y
Sbjct: 438 HRLVPKQFQNSNRTNFQNETTCIVLTHCGNFVIIGYSSGDIERFNIQSGLHRATY----- 492
Query: 468 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS----RWEVGCSLVKIVY 523
+ AH V G+A D+ N +IS G +K W FKG+ K R G +L+++
Sbjct: 493 -GSPAHKMAVRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRL-- 549
Query: 524 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
HR + +LA + I + D+ +VRKF GHT ++ D FS D +WL+++ MD ++++
Sbjct: 550 HRESSMLAIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTFSPDSRWLITAAMDSTIKV 609
Query: 584 WDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDS--NIDSY 641
WD+ + +D V+ +LS+SPN D LATAHV G+YLW N+ +F+ S +ID
Sbjct: 610 WDIPSSYMVDHFRVEAPCVSLSMSPNGDFLATAHVGLLGIYLWANKTLFNQISLRSIDPL 669
Query: 642 ASGKEI-VSVKMPSVSSVE-GCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLVTLSL 699
+ + + +E G ++ + D + + + PT Q +L+TLS
Sbjct: 670 ELAPYVGLPTNVCDAMELEDGMKELEIDEEDESKLGELVDTKYETPT--QLSEELITLSG 727
Query: 700 LPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESL 759
L S+WQ+L++L++IK RN APFFLP+V L E+ F KE+ ES
Sbjct: 728 LAASRWQNLLDLELIKQRNKPKAPPKAPKQAPFFLPTVSGL--ELRFDVENGQKEEDES- 784
Query: 760 KVGNKTKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQE 819
++ K ++ F QLL A+ +F++ ++ L PS +D E++ L H E
Sbjct: 785 RI-RKASTLNNLTAFGQLLEETADSLDFASAVAHLTQLGPSMVDFEIKSL-------HPE 836
Query: 820 LDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLLE 879
L++ L + NFE Q+ + +FL+ HG + L + R + +
Sbjct: 837 AGGT--LLAMLQFLKLVKFMFGTNLNFELAQSYLSVFLRSHGLGLTEFPDLVKELRTVSQ 894
Query: 880 VQSAVWQKIDKMFQSARCVVSFLSN 904
VQ WQ++++ VV+ L N
Sbjct: 895 VQQEAWQRVEEKLIYGTGVVAALRN 919
>SGD|S000004401 [details] [associations]
symbol:UTP21 "Subunit of U3-containing 90S preribosome and
SSU processome" species:4932 "Saccharomyces cerevisiae" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA;IGI] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IC] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SGD:S000004401
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 EMBL:BK006945 InterPro:IPR011047 SUPFAM:SSF50998
EMBL:U19729 GO:GO:0006364 GO:GO:0032040 GO:GO:0042274 GO:GO:0034388
PIR:S55965 RefSeq:NP_013513.3 RefSeq:NP_058174.3
ProteinModelPortal:Q06078 SMR:Q06078 DIP:DIP-6416N IntAct:Q06078
MINT:MINT-561636 STRING:Q06078 PaxDb:Q06078 PeptideAtlas:Q06078
EnsemblFungi:YLR409C GeneID:851125 GeneID:851128 KEGG:sce:YLR409C
KEGG:sce:YLR410W-B CYGD:YLR409c GeneTree:ENSGT00390000004976
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH OrthoDB:EOG46T68Q
NextBio:967857 Genevestigator:Q06078 GermOnline:YLR409C
Uniprot:Q06078
Length = 939
Score = 982 (350.7 bits), Expect = 6.4e-99, P = 6.4e-99
Identities = 273/929 (29%), Positives = 451/929 (48%)
Query: 3 IFEPYKAIGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGP-QLPKKIRA 61
IF P++ IG +++ VPF+ LG+ ++ VGK F IY+ L+L+ V + P I A
Sbjct: 23 IFSPFRIIGNVSNGVPFATGTLGSTFYIVTCVGKTFQIYDANTLHLLFVSEKETPSSIVA 82
Query: 62 LASYRDYTFAAYGNHIAVVKRAHQVATWSRHS-AKVNLLLLFGEHILSIDIDGNMFIWAF 120
L+++ Y +AAY N + + KR + + A V L +FG+++ + D ++FI+
Sbjct: 83 LSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEHLCIFGDYLCASTDDNSIFIYKK 142
Query: 121 KGIEENLAPVGHVKLDDKFTP----TCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
++ + KL + H TYLNK+ V ++ L L+N+ T K ++
Sbjct: 143 SDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYLNKLTVVTKSNVL-LFNVRTGKLVFT 201
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDG 236
+ P LD++A+G G++ + N+R + + T + +++L+F +DG
Sbjct: 202 SNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRKGKRIRTIKIP-QSRISSLSFRTDG 260
Query: 237 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNA---IISLHFFANEPVLMSASADNSIK 293
L+ G SSG + ++L++R V++ H + + F +P+++++ DNS+K
Sbjct: 261 SSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDNSLK 320
Query: 294 MWIFDTT----DGD-----PRLLRFRSGHSAPPLCIRFYANGRH-ILSAGQDRAFRLFSV 343
++FD + GD PR LR R GHS PP I F + H +LSA +DR+ FS+
Sbjct: 321 EYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSASKDRSLWSFSL 380
Query: 344 IQDQQSRELSQRHVAKRARXXXXXXXXXXXXP-VIAFDCAEIRERDWCNVVTCHMDTAQA 402
+D QS+E+SQR K+ P ++A R +W N++T H D A
Sbjct: 381 RKDAQSQEMSQRLHKKQDGGRVGGSTIKSKFPEIVALAIENARIGEWENIITAHKDEKFA 440
Query: 403 YVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSY 462
W ++N +G + VK+ +S CGNF +G++ G I +N+QSGI R Y
Sbjct: 441 RTWDMRNKRVGRWTFDTTDDG--FVKSVAMSQCGNFGFIGSSNGSITIYNMQSGILRKKY 498
Query: 463 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV 522
H V G++ D N M+S G G + +DF L + ++ + +V
Sbjct: 499 K--------LHKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKSTLLGKLKLDAPITAMV 550
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
YHR + L A DDL I + D V R+VR+ GH++RIT F FS +G+W++S+ +D ++R
Sbjct: 551 YHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFSPEGRWIVSASLDSTIR 610
Query: 583 IWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSN--IDS 640
WD+ ID I VD T + SPN D+LAT HV NG+ +W NR F S ID
Sbjct: 611 TWDLPTGGCIDGIIVDNVATNVKFSPNGDLLATTHVTGNGICIWTNRAQFKTVSTRTIDE 670
Query: 641 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIP-DLVTLSL 699
E + +PS +SV G S + + + + F T +QI +L+TLS+
Sbjct: 671 ----SEFARMALPS-TSVRGNDSMLSGALESNGGEDLNDIDFNTYTSLEQIDKELLTLSI 725
Query: 700 LPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLP-SVPSLSGEILFK-------PSES 751
P+S+ +L++LD+I+ R+ PFFL S + E + P E
Sbjct: 726 GPRSKMNTLLHLDVIRKRSKPKEAPKKSEKLPFFLQLSGEKVGDEASVREGIAHETPEEI 785
Query: 752 TKEDTESLKV------GNKTKPDIPV---SQFIQLLHSCAEMKNFSAFTDYIKSLSPSTL 802
+ D E+ K NK K + S F + L ++ K++S+ + + SP+ +
Sbjct: 786 HRRDQEAQKKLDAEEQMNKFKVTGRLGFESHFTKQLREGSQSKDYSSLLATLINFSPAAV 845
Query: 803 DMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGE 862
D+E+R L + D I +D L + NFE + + L K HG+
Sbjct: 846 DLEIRSLNSFEPFDE-----------IVWFIDALTQGLKSNKNFELYETFMSLLFKAHGD 894
Query: 863 TVRCHTKLQDKARKLLEVQSAVWQKIDKM 891
+ + K QD A L + V +K D++
Sbjct: 895 VIHANNKNQDIASALQNWED-VHKKEDRL 922
>CGD|CAL0005566 [details] [associations]
symbol:UTP21 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] [GO:0034388 "Pwp2p-containing subcomplex
of 90S preribosome" evidence=IEA] [GO:0005816 "spindle pole body"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 249/850 (29%), Positives = 415/850 (48%)
Query: 93 SAKVNLLLLFGEHILSIDIDGNMFIWA-FKGIEENLAPVGHVKLDDKFTP---TCIMHPD 148
++ VN LL+FGE++++ ++G++F++ +G + +++ + ++HP
Sbjct: 120 NSTVNQLLVFGEYLIATTLEGDIFVFRKTEGKKFPTELYTTIRIINSLVEGEIVGLIHPP 179
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKI 205
TYLNKVIV + + S+ + N+ T K LY E + G P LDV+AVG S+G +
Sbjct: 180 TYLNKVIVATTQ-SVFVINVRTGKLLYKSRELQFEGEKISSIEAAPVLDVIAVGTSNGNV 238
Query: 206 HVHNVR----YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+ N++ ++++T V +++F +DG P L +G ++G + ++L+K+
Sbjct: 239 FLFNIKKGKVLGQKIITSGTESSSKVASISFRTDGAPHLVAGLNNGDLYFYDLDKKSRVH 298
Query: 262 VIREAHDNA---IISLHFFANEPVLMSASADNSIKMWIFD---TTDGD-----PRLLRFR 310
V+R AH + + F +P+++S DN +K ++FD TT PR LR R
Sbjct: 299 VLRNAHKETHGGVANAKFLNGQPIVLSNGGDNHLKEFVFDPNLTTSNSSIVPPPRHLRSR 358
Query: 311 SGHSAPPLCIRFYANGR-H-ILSAGQDRAFRLFSVIQDQQSRELSQRHVAKR--ARXXXX 366
GHSAPP+ I F + H +LSA +D+ F FS+ +D Q++E+SQR + R
Sbjct: 359 GGHSAPPVAIEFPQEDKTHFLLSASRDKTFWTFSLRKDAQAQEMSQRLQKSKDGKRQAGQ 418
Query: 367 XXXXXXXXP-VIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPT 425
P +I+ + RE DW N++T H D A W +N +G H+L
Sbjct: 419 VVSMREKFPEIISISSSYAREGDWENIITAHKDETFARTWDSRNKRVGRHLLNTIDGG-- 476
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 485
VK+ +S CGNF ++G++ G I +NLQSG+ R Y+ H V G+A D
Sbjct: 477 IVKSVCVSQCGNFGLVGSSSGGIGSYNLQSGLLRKKYV--------LHKQAVTGLAIDGM 528
Query: 486 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVV 545
N M+S G G + +DF + ++ + ++YH+ + L+A DDL I + DV
Sbjct: 529 NRKMVSCGLDGIVGFYDFGKSVYLGKLQLEAPITSMIYHKSSDLVACALDDLSIVVIDVT 588
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALS 605
+++R GHT+RI+ FS DG+W++S +D +LR WD+ ID + + + TA+
Sbjct: 589 TQKVIRILYGHTNRISGMDFSPDGRWIVSVALDSTLRTWDLPTGGCIDGVILPIVATAVK 648
Query: 606 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDEN 665
SP D+LAT HV NGV LW NR F S + E ++ +P+ S G +
Sbjct: 649 FSPIGDILATTHVSGNGVSLWTNRAQFKPVST--RHVEEDEFSTILLPNASGDGGSTMLD 706
Query: 666 SSQPDVHRTDRVPKDSFGLPTFKQQIP-DLVTLSLLPKSQWQSLINLDIIKARNXXXXXX 724
+ D + + T QI L+TLS P+S++ +L++LD IK ++
Sbjct: 707 GFLDEDSNEDGTIDEQY---TSAAQIDASLITLSSEPRSKFNTLLHLDTIKQQSKPKEAP 763
Query: 725 XXXXXAPFFLPSVPSLSGEILF----KPSESTK---EDTES-LKVGNKTKPDIPVSQFIQ 776
APFFL G+ K SE T E+T S L+ + S+F +
Sbjct: 764 KKPENAPFFLQLTGQAVGDRASVAEGKTSEQTNNTVEETNSKLRKLDTNGNHAFESEFTK 823
Query: 777 LLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYL 836
LL E F F Y+ +LSP+ LD+E+R L + L + ++ L
Sbjct: 824 LLREAGESGQFERFLTYLLNLSPAVLDLEIRSL-----NSFVPLTEMTNFIQA------L 872
Query: 837 IHEISCRNNFEFIQAVIRLFLKIHGETVRC---HTKLQDKARKLLEVQSAVWQKIDKMFQ 893
+ N+E + + +F IHG+ + T L + + ++ K+D + +
Sbjct: 873 NAGLKSNANYEIWETLYAMFFNIHGDVIHQFENETSLHEALEEYRQLNDEKNNKMDSLVK 932
Query: 894 SARCVVSFLS 903
+VSF+S
Sbjct: 933 YCASIVSFIS 942
Score = 416 (151.5 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 102/346 (29%), Positives = 185/346 (53%)
Query: 3 IFEPYKAIGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGP-QLPKKIRA 61
IF P++ +G +T S PF++ LG+ + SVG++F IY+ A L+L+ V Q P +I
Sbjct: 28 IFSPFRVLGNVTDSTPFAMGTLGSTFYAVTSVGRSFQIYDLATLHLLFVSQTQTPSRITC 87
Query: 62 LASYRDYTFAAYGNHIAVVKRA---HQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIW 118
LA++ + +A+YG+ I + +R H++ ++ VN LL+FGE++++ ++G++F+
Sbjct: 88 LAAHHHFVYASYGDRIGIFRRGRLEHELVC--EGNSTVNQLLVFGEYLIATTLEGDIFV- 144
Query: 119 AFKGIEENLAPVG---HVKLDDKFTP---TCIMHPDTYLNKVIVGSQEGSLQLWNISTKK 172
F+ E P +++ + ++HP TYLNKVIV + + S+ + N+ T K
Sbjct: 145 -FRKTEGKKFPTELYTTIRIINSLVEGEIVGLIHPPTYLNKVIVATTQ-SVFVINVRTGK 202
Query: 173 KLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR----YDEELVTFTHSMRG 225
LY E + G P LDV+AVG S+G + + N++ ++++T
Sbjct: 203 LLYKSRELQFEGEKISSIEAAPVLDVIAVGTSNGNVFLFNIKKGKVLGQKIITSGTESSS 262
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA---IISLHFFANEPV 282
V +++F +DG P L +G ++G + ++L+K+ V+R AH + + F +P+
Sbjct: 263 KVASISFRTDGAPHLVAGLNNGDLYFYDLDKKSRVHVLRNAHKETHGGVANAKFLNGQPI 322
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
++S DN +K ++FD P L S PP +R + G H
Sbjct: 323 VLSNGGDNHLKEFVFD-----PNLTTSNSSIVPPPRHLR--SRGGH 361
>UNIPROTKB|Q5ALL2 [details] [associations]
symbol:UTP21 "Putative uncharacterized protein UTP21"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005566
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACQ01000008
EMBL:AACQ01000007 GO:GO:0006364 GO:GO:0032040 KO:K14554
RefSeq:XP_722467.1 RefSeq:XP_722608.1 ProteinModelPortal:Q5ALL2
STRING:Q5ALL2 GeneID:3635757 GeneID:3635913 KEGG:cal:CaO19.1566
KEGG:cal:CaO19.9139 Uniprot:Q5ALL2
Length = 942
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 249/850 (29%), Positives = 415/850 (48%)
Query: 93 SAKVNLLLLFGEHILSIDIDGNMFIWA-FKGIEENLAPVGHVKLDDKFTP---TCIMHPD 148
++ VN LL+FGE++++ ++G++F++ +G + +++ + ++HP
Sbjct: 120 NSTVNQLLVFGEYLIATTLEGDIFVFRKTEGKKFPTELYTTIRIINSLVEGEIVGLIHPP 179
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKI 205
TYLNKVIV + + S+ + N+ T K LY E + G P LDV+AVG S+G +
Sbjct: 180 TYLNKVIVATTQ-SVFVINVRTGKLLYKSRELQFEGEKISSIEAAPVLDVIAVGTSNGNV 238
Query: 206 HVHNVR----YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+ N++ ++++T V +++F +DG P L +G ++G + ++L+K+
Sbjct: 239 FLFNIKKGKVLGQKIITSGTESSSKVASISFRTDGAPHLVAGLNNGDLYFYDLDKKSRVH 298
Query: 262 VIREAHDNA---IISLHFFANEPVLMSASADNSIKMWIFD---TTDGD-----PRLLRFR 310
V+R AH + + F +P+++S DN +K ++FD TT PR LR R
Sbjct: 299 VLRNAHKETHGGVANAKFLNGQPIVLSNGGDNHLKEFVFDPNLTTSNSSIVPPPRHLRSR 358
Query: 311 SGHSAPPLCIRFYANGR-H-ILSAGQDRAFRLFSVIQDQQSRELSQRHVAKR--ARXXXX 366
GHSAPP+ I F + H +LSA +D+ F FS+ +D Q++E+SQR + R
Sbjct: 359 GGHSAPPVAIEFPQEDKTHFLLSASRDKTFWTFSLRKDAQAQEMSQRLQKSKDGKRQAGQ 418
Query: 367 XXXXXXXXP-VIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPT 425
P +I+ + RE DW N++T H D A W +N +G H+L
Sbjct: 419 VVSMREKFPEIISISSSYAREGDWENIITAHKDETFARTWDSRNKRVGRHLLNTIDGG-- 476
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 485
VK+ +S CGNF ++G++ G I +NLQSG+ R Y+ H V G+A D
Sbjct: 477 IVKSVCVSQCGNFGLVGSSSGGIGSYNLQSGLLRKKYV--------LHKQAVTGLAIDGM 528
Query: 486 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVV 545
N M+S G G + +DF + ++ + ++YH+ + L+A DDL I + DV
Sbjct: 529 NRKMVSCGLDGIVGFYDFGKSVYLGKLQLEAPITSMIYHKSSDLVACALDDLSIVVIDVT 588
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALS 605
+++R GHT+RI+ FS DG+W++S +D +LR WD+ ID + + + TA+
Sbjct: 589 TQKVIRILYGHTNRISGMDFSPDGRWIVSVALDSTLRTWDLPTGGCIDGVILPIVATAVK 648
Query: 606 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDEN 665
SP D+LAT HV NGV LW NR F S + E ++ +P+ S G +
Sbjct: 649 FSPIGDILATTHVSGNGVSLWTNRAQFKPVST--RHVEEDEFSTILLPNASGDGGSTMLD 706
Query: 666 SSQPDVHRTDRVPKDSFGLPTFKQQIP-DLVTLSLLPKSQWQSLINLDIIKARNXXXXXX 724
+ D + + T QI L+TLS P+S++ +L++LD IK ++
Sbjct: 707 GFLDEDSNEDGTIDEQY---TSAAQIDASLITLSSEPRSKFNTLLHLDTIKQQSKPKEAP 763
Query: 725 XXXXXAPFFLPSVPSLSGEILF----KPSESTK---EDTES-LKVGNKTKPDIPVSQFIQ 776
APFFL G+ K SE T E+T S L+ + S+F +
Sbjct: 764 KKPENAPFFLQLTGQAVGDRASVAEGKTSEQTNNTVEETNSKLRKLDTNGNHAFESEFTK 823
Query: 777 LLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYL 836
LL E F F Y+ +LSP+ LD+E+R L + L + ++ L
Sbjct: 824 LLREAGESGQFERFLTYLLNLSPAVLDLEIRSL-----NSFVPLTEMTNFIQA------L 872
Query: 837 IHEISCRNNFEFIQAVIRLFLKIHGETVRC---HTKLQDKARKLLEVQSAVWQKIDKMFQ 893
+ N+E + + +F IHG+ + T L + + ++ K+D + +
Sbjct: 873 NAGLKSNANYEIWETLYAMFFNIHGDVIHQFENETSLHEALEEYRQLNDEKNNKMDSLVK 932
Query: 894 SARCVVSFLS 903
+VSF+S
Sbjct: 933 YCASIVSFIS 942
Score = 416 (151.5 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 102/346 (29%), Positives = 185/346 (53%)
Query: 3 IFEPYKAIGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGP-QLPKKIRA 61
IF P++ +G +T S PF++ LG+ + SVG++F IY+ A L+L+ V Q P +I
Sbjct: 28 IFSPFRVLGNVTDSTPFAMGTLGSTFYAVTSVGRSFQIYDLATLHLLFVSQTQTPSRITC 87
Query: 62 LASYRDYTFAAYGNHIAVVKRA---HQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIW 118
LA++ + +A+YG+ I + +R H++ ++ VN LL+FGE++++ ++G++F+
Sbjct: 88 LAAHHHFVYASYGDRIGIFRRGRLEHELVC--EGNSTVNQLLVFGEYLIATTLEGDIFV- 144
Query: 119 AFKGIEENLAPVG---HVKLDDKFTP---TCIMHPDTYLNKVIVGSQEGSLQLWNISTKK 172
F+ E P +++ + ++HP TYLNKVIV + + S+ + N+ T K
Sbjct: 145 -FRKTEGKKFPTELYTTIRIINSLVEGEIVGLIHPPTYLNKVIVATTQ-SVFVINVRTGK 202
Query: 173 KLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR----YDEELVTFTHSMRG 225
LY E + G P LDV+AVG S+G + + N++ ++++T
Sbjct: 203 LLYKSRELQFEGEKISSIEAAPVLDVIAVGTSNGNVFLFNIKKGKVLGQKIITSGTESSS 262
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA---IISLHFFANEPV 282
V +++F +DG P L +G ++G + ++L+K+ V+R AH + + F +P+
Sbjct: 263 KVASISFRTDGAPHLVAGLNNGDLYFYDLDKKSRVHVLRNAHKETHGGVANAKFLNGQPI 322
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
++S DN +K ++FD P L S PP +R + G H
Sbjct: 323 VLSNGGDNHLKEFVFD-----PNLTTSNSSIVPPPRHLR--SRGGH 361
>ASPGD|ASPL0000018270 [details] [associations]
symbol:AN8293 species:162425 "Emericella nidulans"
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040 HOGENOM:HOG000217777
ProteinModelPortal:C8V3R6 EnsemblFungi:CADANIAT00004354 OMA:SSVECVE
Uniprot:C8V3R6
Length = 938
Score = 543 (196.2 bits), Expect = 4.3e-86, Sum P(3) = 4.3e-86
Identities = 149/445 (33%), Positives = 224/445 (50%)
Query: 380 DCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFA 439
D + W ++VT H A W G + + T VK+ IS CG FA
Sbjct: 498 DTTASNKTGWESIVTGHRGDKYARTWFWGKKKAGRWVFET--GDGTDVKSVAISQCGTFA 555
Query: 440 VLGTAGGWIERFNLQSGISRGSY------LDMSERSNYA-------HNGEVVGVACDSTN 486
V+G+AGG I FN+QSG R SY D+ Y+ H V G+A DS N
Sbjct: 556 VVGSAGGSIRLFNMQSGQYRRSYPCQKTKYDLGGEVRYSNKQIHTQHTKSVTGLAIDSLN 615
Query: 487 TLMISAGYHGDIKVWDFK-GRDLKSR-WEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 544
++S G G +K WDF+ G +K W ++ + Y+ ++ L+A DDL IR+ D+
Sbjct: 616 RTVLSCGLDGKVKFWDFQSGLLIKELDWYPMTAITALRYNSMSELVAFSCDDLSIRVVDM 675
Query: 545 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITAL 604
++VR+ G +I DF FS DG+W++++ MD +R+WD+ ID V + T+L
Sbjct: 676 ETKKIVRELWGCAGQINDFIFSSDGRWIIAASMDSIIRVWDLPTGHLIDLFRVSSTCTSL 735
Query: 605 SLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDE 664
++SP D LATAH D G+ LW NR +F S D ++ +P+ SS EG
Sbjct: 736 AMSPTGDFLATAHADGVGIGLWSNRSLFIPVSTRDLNVDN--LLDTGLPT-SSGEGGVGI 792
Query: 665 NSSQPDVHRTDRVPKDSFGLPTFKQQIP-DLVTLSLLPKSQWQSLINLDIIKARNXXXXX 723
+ + D D G + +Q+ D++TLS++PK++WQ+L+++D+IK RN
Sbjct: 793 IEA---AFQQDNEEHDGDGPISCTEQLDRDMLTLSVVPKNKWQTLVHMDLIKERNMPKEP 849
Query: 724 XXXXXXAPFFLPSVPSLSGEILFKPSESTKED---TESLKVGNK--TKPDIPVSQFIQLL 778
APFFLP+ P+ G + + E+ TES +V TK VS+F LL
Sbjct: 850 PKRPEKAPFFLPA-PASDGAPKHNANATLLEEGKLTESSRVAKLQITKNPNAVSRFTSLL 908
Query: 779 HSCAEMKNFSAFTDYIKSLSPSTLD 803
+ +F F +KSL+PS LD
Sbjct: 909 RTGCISGDFEPFFFEMKSLNPSRLD 933
Score = 276 (102.2 bits), Expect = 4.3e-86, Sum P(3) = 4.3e-86
Identities = 87/298 (29%), Positives = 148/298 (49%)
Query: 3 IFEPYKAIGYIT-SSVPFSVQRLGTENF-VTVSVGKAFHIYNCAK-LNLVLVG-PQLPKK 58
IF P++ +G ++ +SVPF+ RLG F +T SVG+ H Y+ + L LV + PQ P+
Sbjct: 36 IFSPFRTLGLVSPTSVPFTCTRLGKATFQITTSVGRCLHTYDLRQGLKLVFISRPQTPRD 95
Query: 59 IRALASYRDYTFAAYG-------NHIAVVKRAHQVATWS---RHSAKVNLLLLFGEHILS 108
I A ++ D FAA+G + V KR ++A+ A + L +FG I+
Sbjct: 96 ITATFAWHDILFAAWGALGPGGSGGVWVFKRGKKIASLETPIEAYAPIEHLTVFGSWIVG 155
Query: 109 IDIDGNMFIWAFKGIEENLAPV-GHVKLD--DKFTPTCIMHPDTYLNKVIVGSQEGSLQL 165
+ ++ +W E + H + + T I + TYLNKV++G +G++ +
Sbjct: 156 CN-GQSVNVWKNGSYEHYTTLILAHSRDNPGQAAYATQICNMPTYLNKVLIGKSDGTVDI 214
Query: 166 WNISTKKKLYE-FKGWGXXXXXXXX--XPALDVVAVGCSDGKIHVHNVRYDEELVTFT-H 221
WN+ T + ++ F + PAL V+A+ +G I + NV + + +F
Sbjct: 215 WNVKTGRLVHSIFAAFPNAGPVTVLRPSPALSVIAIAYKNGSISIQNVETGQSIFSFQPQ 274
Query: 222 SMR-GAVTALAFSSD----GQPLLASGA------SSGVISIWNLEKR-RLQSVIREAH 267
+ R A+T+L F +D G+ SGA +SG I++W+L + R+ V+R AH
Sbjct: 275 APRVPAITSLTFRNDDAGAGEDGQQSGAMATACLASGDITLWDLNRGGRVVGVLRNAH 332
Score = 157 (60.3 bits), Expect = 4.3e-86, Sum P(3) = 4.3e-86
Identities = 50/149 (33%), Positives = 79/149 (53%)
Query: 235 DGQP--LLASGA-SSGVISIWNLEKR-RLQSVIREAHD-------NAIISLHFFANEPVL 283
DGQ +A+ +SG I++W+L + R+ V+R AH + I + F +PV+
Sbjct: 296 DGQQSGAMATACLASGDITLWDLNRGGRVVGVLRNAHKVSAGDPGSGINHIEFLDGQPVI 355
Query: 284 MSASADNSIKMWIFDTTDGDP--RLLRFRSGHSAPPLCIRF---YANG-----RHILSAG 333
+S DNS++ WI D + P R L RSGHS + F +++G + +LSA
Sbjct: 356 VSTGKDNSLRTWIVDESPFSPIPRPLHSRSGHSDTITTVSFLPSHSDGSETTAKWLLSAS 415
Query: 334 QDRAFRLFSVIQDQQSRELSQRHVAKRAR 362
+D + FS+ +D QS ELSQ V + A+
Sbjct: 416 KDSSLWGFSLRKDSQSTELSQGSVEQGAK 444
Score = 57 (25.1 bits), Expect = 9.0e-51, Sum P(2) = 9.0e-51
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 198 VGCSDGKIHV-HNVRYDE-ELVTFTHSMRG-AVTALAFSSDGQPLLAS----GASSGVIS 250
VGC+ ++V N Y+ + HS A A P + G S G +
Sbjct: 154 VGCNGQSVNVWKNGSYEHYTTLILAHSRDNPGQAAYATQICNMPTYLNKVLIGKSDGTVD 213
Query: 251 IWNLEKRRLQSVIREAHDNA 270
IWN++ RL I A NA
Sbjct: 214 IWNVKTGRLVHSIFAAFPNA 233
Score = 57 (25.1 bits), Expect = 8.7e-21, Sum P(2) = 8.7e-21
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 548 RMVRKFEGHTDRITDFCF---SEDG-----KWLLSSGMDGSLRIWDVILAR 590
R + GH+D IT F DG KWLLS+ D SL W L +
Sbjct: 379 RPLHSRSGHSDTITTVSFLPSHSDGSETTAKWLLSASKDSSL--WGFSLRK 427
Score = 45 (20.9 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 25/110 (22%), Positives = 46/110 (41%)
Query: 74 GNHIAVVKRAHQVATWSRHSAKVNLLLLFGEHIL-SIDIDGNMFIWAFKGIEENLAPVG- 131
G + V++ AH+V+ S ++ L G+ ++ S D ++ W E +P+
Sbjct: 322 GRVVGVLRNAHKVSAGDPGSGINHIEFLDGQPVIVSTGKDNSLRTWIVD--ESPFSPIPR 379
Query: 132 --HVKLDDKFTPTCIM----HPD---TYLNKVIVGSQEGSLQLWNISTKK 172
H + T T + H D T ++ S++ SL W S +K
Sbjct: 380 PLHSRSGHSDTITTVSFLPSHSDGSETTAKWLLSASKDSSL--WGFSLRK 427
Score = 44 (20.5 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 568 DGK-WLLSSGMDGSLRIWDV 586
DG+ ++S+G D SLR W V
Sbjct: 350 DGQPVIVSTGKDNSLRTWIV 369
Score = 44 (20.5 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 10/45 (22%), Positives = 17/45 (37%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 299
E R I H ++ L + ++S D +K W F +
Sbjct: 590 EVRYSNKQIHTQHTKSVTGLAIDSLNRTVLSCGLDGKVKFWDFQS 634
Score = 37 (18.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 295 WIFDTTDG 302
W+F+T DG
Sbjct: 533 WVFETGDG 540
>DICTYBASE|DDB_G0277019 [details] [associations]
symbol:wdr36 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0277019
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974 GO:GO:0030515
eggNOG:COG2319 GenomeReviews:CM000151_GR EMBL:AAFI02000019
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14554
RefSeq:XP_642832.1 ProteinModelPortal:Q550V0 STRING:Q550V0
EnsemblProtists:DDB0237567 GeneID:8620696 KEGG:ddi:DDB_G0277019
InParanoid:Q550V0 OMA:VSANMEN Uniprot:Q550V0
Length = 1026
Score = 711 (255.3 bits), Expect = 3.6e-84, Sum P(2) = 3.6e-84
Identities = 187/659 (28%), Positives = 325/659 (49%)
Query: 3 IFEPYKAIGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIRAL 62
IF PYK++GY++S VPF ++ + +++G +F + N KL +V KIR +
Sbjct: 7 IFLPYKSVGYVSSGVPFKLRAEKLHYSIMLAIGNSFQLLNSIKLFPRMVSNSQEGKIRDM 66
Query: 63 ASYR-DYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFK 121
+ Y+ D+ I + K ++ + HS+KV L++F + S+ + + +W
Sbjct: 67 SFYKKDHFLTTCKKDIILWKGQYEEFRFRGHSSKVIKLMVFDNILFSLAKNNELIMWDVD 126
Query: 122 G---IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEF- 177
+E L P + K + T I+HP Y NK+++G + G Q+WNI TKK ++ F
Sbjct: 127 SRLIFKEQL-PEFNAKTH-RITE--IVHPLGYYNKILIGFESGEAQIWNIKTKKLIFTFN 182
Query: 178 -----KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAF 232
K P D++A+G SDG + +HN++ ++ +++F RG+V++++F
Sbjct: 183 LVKDNKNIKDKITSFQQSPVSDIIAIGFSDGNVIIHNLKLNKTVLSF--QQRGSVSSISF 240
Query: 233 SSDGQPL-LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNS 291
SDGQ +A+ + SG I IW+LEK + ++ AHD+ + F EP++ + DNS
Sbjct: 241 RSDGQKQHVATSSHSGDILIWDLEKNKPFHTLK-AHDSECTKVEFLREEPIICTTGNDNS 299
Query: 292 IKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH--ILSAGQDRAFRLFSVIQDQQS 349
IKMW F+ DG P LLR R+GH PP F+ + + ++S D++ R S++ +
Sbjct: 300 IKMWQFNGVDGVPILLRERTGHLDPPKSSEFFGDEQENSVISIS-DQSIRYVSIVASTFN 358
Query: 350 RELSQRHVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQN 409
+ELS+++ K P F R R W V+ H D+ A+ W +
Sbjct: 359 KELSKKNFKKEM------------TPFSGFSTNFRRNRSWETAVSIHEDSKHAFTWDCSS 406
Query: 410 FVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERS 469
+ + + + P + + IS CGNF GT G + +FN+QSGI R L +++
Sbjct: 407 YSINKKLNIQEP-----ISSTKISTCGNFVFFGTVYGNLLKFNIQSGIKRAKILPNIQKT 461
Query: 470 NYAH------NGEVVGVACDSTNTLM----ISAGYHGDIKVWDFKGRDLKSR-----WEV 514
+ N ++ DS + Y DI + ++ + +
Sbjct: 462 SITSIIVEPTNQFIITSGLDSIINYWDFNDLKYLYSIDINNTNTNNKENQDNNNNDNKKS 521
Query: 515 GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLS 574
+ K++ H +G+ A V++D IRL+D+ ++VR F + + FS DG+W+++
Sbjct: 522 KIRISKMLLHSESGIFAVVSNDDKIRLYDIDTRKLVRYFNVKGN-VNSIVFSHDGRWIIA 580
Query: 575 SG-MDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMF 632
S +D +R+ D+ + ID + +T+LS SP + L T H Q +YLW N+ F
Sbjct: 581 STQVDSVVRVLDIPSGKMIDWFKMPKPVTSLSFSPKGEYLVTTHSGQLPIYLWSNQSHF 639
Score = 156 (60.0 bits), Expect = 3.6e-84, Sum P(2) = 3.6e-84
Identities = 45/166 (27%), Positives = 84/166 (50%)
Query: 743 EILFKPSESTKEDTESLKVGNKTKPDI---PVSQFIQLLHSCAEMKNFSAFTDYIKSLSP 799
E L K +E+ K + E + K D + F L + +N+S +KSL+P
Sbjct: 870 EDLEKTTETFKNEKEIYRSDKVIKTDSLQGTRTNFNLSLENGYITQNYSESLRILKSLTP 929
Query: 800 STLDMELRMLQIIDHDDHQELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKI 859
S +D E+R L D +Y I + D++++++ +++FIQ+++ + LK+
Sbjct: 930 SGIDFEIRTLTTAD-----------DYADIHYMFDFIVYQLLKNGDYDFIQSILSVTLKV 978
Query: 860 HGETVRCHTKLQDKARKLLEVQSAVWQKIDKMFQSARCVVSFLSNS 905
HG + T +D R+LL V + W K+ K+F S C++ + +N+
Sbjct: 979 HGYLLYDTTFKRD-LRQLLLVFNEPWFKMQKLFHSNICMLRYFTNT 1023
Score = 156 (60.0 bits), Expect = 4.8e-18, Sum P(2) = 4.8e-18
Identities = 64/246 (26%), Positives = 110/246 (44%)
Query: 498 IKVWDFKGRDLKSRWEVGCSLVKIVY-HRVNGLLATVADDLVIRLFDVVALRMVRKFEGH 556
I+++D R L + V ++ IV+ H ++A+ D V+R+ D+ + +M+ F+
Sbjct: 546 IRLYDIDTRKLVRYFNVKGNVNSIVFSHDGRWIIASTQVDSVVRVLDIPSGKMIDWFK-M 604
Query: 557 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLAT 615
+T FS G++L+++ G L I+ + + Q H V + PN +L +
Sbjct: 605 PKPVTSLSFSPKGEYLVTTH-SGQLPIY--LWSNQS---HFGSVFLKTPPQIPNTIILPS 658
Query: 616 AHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTD 675
++ + + N S + ++ ++ + DE V D
Sbjct: 659 QVIEISPIQESSNNKQKSSTKKLKEKEQHEQDEEFEIQQDLGLPEEFDEEMEDNQVDNND 718
Query: 676 RVPKDSFGLPTFKQQIPDLVTLSL-LPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFL 734
D+ T KQ I L+TLS + KS+WQSL+NLDIIK RN APFFL
Sbjct: 719 NDADDN-KKSTIKQ-IDQLITLSSDVAKSKWQSLLNLDIIKERNRPIQQNEKPALAPFFL 776
Query: 735 PSVPSL 740
++ L
Sbjct: 777 STIQGL 782
>UNIPROTKB|G4N4W8 [details] [associations]
symbol:MGG_16744 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0000935 "barrier septum"
evidence=ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISS] [GO:0005816 "spindle pole
body" evidence=ISS] [GO:0005819 "spindle" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0006364 "rRNA processing" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005634
GO:GO:0005816 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
EMBL:CM001233 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364
GO:GO:0032040 GO:GO:0000935 GO:GO:0005732 RefSeq:XP_003711887.1
ProteinModelPortal:G4N4W8 EnsemblFungi:MGG_16744T0 GeneID:12984240
KEGG:mgr:MGG_16744 Uniprot:G4N4W8
Length = 1042
Score = 484 (175.4 bits), Expect = 1.5e-80, Sum P(4) = 1.5e-80
Identities = 129/369 (34%), Positives = 190/369 (51%)
Query: 458 SRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR--WEVG 515
S+ ++L S R H V G+ DS +I+ G +K WDF L + W
Sbjct: 613 SKSTFLPGSGR----HKKAVTGIVVDSMLKHVITCSLDGTVKFWDFLTGALLDQIDWAPM 668
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
S++ YH + LLA DD IR+ D+ R +R+F G I DFCFS DG+W++++
Sbjct: 669 TSIIGCRYHSGSNLLAFSCDDNSIRVVDMETKRTIREFWGCQSTINDFCFSPDGRWIVAA 728
Query: 576 GMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGD 635
D +LR+WD+ + IDA+ ++ A+S S + LATA + GV+LW NR +F
Sbjct: 729 SQDSTLRVWDLPTSHLIDAVRLEQPCKAVSFSSTGEFLATATEGELGVHLWTNRTLFKHV 788
Query: 636 SNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDS--FGLPTFKQQIPD 693
+ S KEI + P+ S EG D D P+D+ P+ Q D
Sbjct: 789 AT--KQISEKEIAHISAPTTSG-EG----GFGIVDAAFEDDAPEDNDIITAPSLDQLSAD 841
Query: 694 LVTLSLLPKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTK 753
L+TLSL+PKS+WQ+L++LD+IK RN APFFLP V + ++ T
Sbjct: 842 LMTLSLVPKSKWQTLLHLDLIKNRNKPKEAPKVPEKAPFFLPPVGEQNSIDAVAKTDKTS 901
Query: 754 EDTESLKVGNKTKPDIPVSQ--FIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQI 811
D++S ++ T D+ SQ F L + A N+ F +++KSLSPST D+ELR L
Sbjct: 902 -DSQS-RI---TALDMSRSQEAFTAKLRAGAASGNYDGFIEHLKSLSPSTADLELRSLSS 956
Query: 812 IDHDDHQEL 820
D D ++ L
Sbjct: 957 SDGDFNELL 965
Score = 245 (91.3 bits), Expect = 4.6e-53, Sum P(4) = 4.6e-53
Identities = 84/264 (31%), Positives = 129/264 (48%)
Query: 643 SGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDS--FGLPTFKQQIPDLVTLSLL 700
S KEI + P+ S EG D D P+D+ P+ Q DL+TLSL+
Sbjct: 794 SEKEIAHISAPTTSG-EG----GFGIVDAAFEDDAPEDNDIITAPSLDQLSADLMTLSLV 848
Query: 701 PKSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLK 760
PKS+WQ+L++LD+IK RN APFFLP V + ++ T D++S +
Sbjct: 849 PKSKWQTLLHLDLIKNRNKPKEAPKVPEKAPFFLPPVGEQNSIDAVAKTDKTS-DSQS-R 906
Query: 761 VGNKTKPDIPVSQ--FIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQ 818
+ T D+ SQ F L + A N+ F +++KSLSPST D+ELR L D D ++
Sbjct: 907 I---TALDMSRSQEAFTAKLRAGAASGNYDGFIEHLKSLSPSTADLELRSLSSSDGDFNE 963
Query: 819 ELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLL 878
L I+ L L+ R ++E +QA + +FL++H + V L + R+
Sbjct: 964 LLH------FIKALTARLV----ARRDYELMQAWMTVFLRLHCDQVVLDDVLIEALRQWK 1013
Query: 879 EVQSAVWQKIDKMFQSARCVVSFL 902
+ +++D + VV FL
Sbjct: 1014 VQEEKEKERLDNLVGYCGGVVGFL 1037
Score = 242 (90.2 bits), Expect = 1.5e-80, Sum P(4) = 1.5e-80
Identities = 81/299 (27%), Positives = 144/299 (48%)
Query: 3 IFEPYKAIGYITSS-VPFSVQRLGTENF-VTVSVGKAFHIYNCAK-LNLVLVG-PQLPKK 58
IF P++ IG + S+ VPF+ G F +T VG+ H Y+ + LNL+ V PQ P+
Sbjct: 34 IFSPFRTIGLVNSTRVPFTTIPRGKTTFQITTCVGRCLHTYDLKRGLNLLFVTRPQTPED 93
Query: 59 IRALASYRDYTFAAYGNH---------IAVVKRAHQVATW---SRHSAKVNLLLLFGEHI 106
I A ++ D ++A+G+ I V +R +VA + + ++ +L+FG I
Sbjct: 94 ITATFAHGDQVYSAWGSPRKGAKVAQGIWVFQRGKKVAELELPANLNQPIHQILVFGSWI 153
Query: 107 LSIDIDGNMFIWAFKGIEE--NLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQ 164
+ + +W +E + + ++ T I + TYLNK+ VG ++G ++
Sbjct: 154 IGC-AQTRIEVWKTGTLEHYTTIYTMAAAHGGNEITGG-IRNMPTYLNKIFVGRKDGWVE 211
Query: 165 LWNISTKKKLYEF---KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTH 221
+WN+ST K +Y PAL +A+ S G + + N+ D+ ++
Sbjct: 212 IWNVSTGKLIYTILPPSPKAGAVTCMEPTPALSTMAIAYSSGLLMIQNILTDKPVLAVKA 271
Query: 222 SMRGA-VTALAFSSDGQP---------LLASGAS-SGVISIWNLEKR-RLQSVIREAHD 268
A V+ + F +DG+ ++A+ + SG I+ W+L K R+ SV+R AH+
Sbjct: 272 GTEDAPVSTITFRTDGKGAGQAQDKDGVMATATTGSGDITFWDLNKGGRIMSVLRGAHN 330
Score = 157 (60.3 bits), Expect = 1.5e-80, Sum P(4) = 1.5e-80
Identities = 37/99 (37%), Positives = 57/99 (57%)
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTT--DGDPRLLRFRSGHSAPPLCIRFY-------- 323
+ F + V++++ DNS+K WIFD PR+L RSGH+AP C++F
Sbjct: 346 VEFLPGQHVILTSGLDNSLKSWIFDEAALSPVPRVLHSRSGHAAPVTCLQFLPSDFDGAE 405
Query: 324 ANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRAR 362
A + +LS G DR+ +S+ +D QS ELSQ + K+A+
Sbjct: 406 AGNKWLLSGGLDRSLWGWSLRRDGQSTELSQGSIRKKAK 444
Score = 95 (38.5 bits), Expect = 1.5e-80, Sum P(4) = 1.5e-80
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 389 WCNVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWI 448
W +V+T H + +A W G P + + V IS CG FA++G+ G +
Sbjct: 511 WESVITAHRNDPKARTWFWGRKKAGRWAF-PTGDG-SYVSTVAISPCGTFALVGSMEGGV 568
Query: 449 ERFNLQSGISR 459
+ +NLQSG R
Sbjct: 569 DMYNLQSGQHR 579
Score = 74 (31.1 bits), Expect = 4.6e-19, Sum P(2) = 4.6e-19
Identities = 49/237 (20%), Positives = 90/237 (37%)
Query: 110 DIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHP-DTYLNKVIVGSQEGSLQLWNI 168
D + W K P G D + T + P T+ +VGS EG + ++N+
Sbjct: 521 DPKARTWFWGRKKAGRWAFPTG----DGSYVSTVAISPCGTF---ALVGSMEGGVDMYNL 573
Query: 169 STKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG--A 226
+ + F L V + ++ ++ + Y+ + S R A
Sbjct: 574 QSGQHRQRFPS----KLTPAQARQLKVQQLRQANSELM--QLEYNSKSTFLPGSGRHKKA 627
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
VT + S + ++ G + W+ L I A +II + + +L +
Sbjct: 628 VTGIVVDSMLKHVITCSLD-GTVKFWDFLTGALLDQIDWAPMTSIIGCRYHSGSNLLAFS 686
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
DNSI++ +T R +R G + F +GR I++A QD R++ +
Sbjct: 687 CDDNSIRVVDMETK----RTIREFWGCQSTINDFCFSPDGRWIVAASQDSTLRVWDL 739
Score = 66 (28.3 bits), Expect = 1.9e-38, Sum P(3) = 1.9e-38
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 541 LFDVVAL----RMVRKFEGHTDRIT-------DFCFSEDG-KWLLSSGMDGSLRIWDV 586
+FD AL R++ GH +T DF +E G KWLLS G+D SL W +
Sbjct: 368 IFDEAALSPVPRVLHSRSGHAAPVTCLQFLPSDFDGAEAGNKWLLSGGLDRSLWGWSL 425
Score = 61 (26.5 bits), Expect = 1.8e-49, Sum P(3) = 1.8e-49
Identities = 33/158 (20%), Positives = 60/158 (37%)
Query: 155 IVGSQEGSLQLWNISTKKK---LYEFK---GWGXXXXXXXXXPA-LDVVAVGCSDGKIHV 207
I+G + +++W T + +Y G P L+ + VG DG + +
Sbjct: 153 IIGCAQTRIEVWKTGTLEHYTTIYTMAAAHGGNEITGGIRNMPTYLNKIFVGRKDGWVEI 212
Query: 208 HNVRYDEELVTFT--HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
NV + + T GAVT + + +A SSG++ I N+ + ++
Sbjct: 213 WNVSTGKLIYTILPPSPKAGAVTCME-PTPALSTMAIAYSSGLLMIQNILTDKPVLAVKA 271
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGD 303
++A +S F + + D M T GD
Sbjct: 272 GTEDAPVSTITFRTDGKGAGQAQDKDGVMATATTGSGD 309
Score = 56 (24.8 bits), Expect = 3.4e-17, Sum P(2) = 3.4e-17
Identities = 31/163 (19%), Positives = 65/163 (39%)
Query: 91 RHSAKVNLLLLFG--EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
RH V +++ +H+++ +DG + W F L + + C H
Sbjct: 623 RHKKAVTGIVVDSMLKHVITCSLDGTVKFWDFL-TGALLDQIDWAPMTSIIG--CRYHSG 679
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
+ N + + S+++ ++ TK+ + EF G P + D + V
Sbjct: 680 S--NLLAFSCDDNSIRVVDMETKRTIREFWGCQSTINDFCFSPDGRWIVAASQDSTLRVW 737
Query: 209 NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISI 251
++ L+ + A++FSS G+ LA+ A+ G + +
Sbjct: 738 DLP-TSHLIDAVR-LEQPCKAVSFSSTGE-FLAT-ATEGELGV 776
Score = 49 (22.3 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 236 GQPLLASGASSGVISIWNLEKRRLQSVIRE--AHDNAIISLHFFANEPVLMSASADNSIK 293
G LLA I + ++E +R IRE + I F + +++AS D++++
Sbjct: 679 GSNLLAFSCDDNSIRVVDMETKR---TIREFWGCQSTINDFCFSPDGRWIVAASQDSTLR 735
Query: 294 MWIFDTT 300
+W T+
Sbjct: 736 VWDLPTS 742
Score = 44 (20.5 bits), Expect = 3.6e-36, Sum P(3) = 3.6e-36
Identities = 7/13 (53%), Positives = 11/13 (84%)
Query: 572 LLSSGMDGSLRIW 584
+L+SG+D SL+ W
Sbjct: 355 ILTSGLDNSLKSW 367
Score = 44 (20.5 bits), Expect = 6.3e-18, Sum P(4) = 6.3e-18
Identities = 12/38 (31%), Positives = 17/38 (44%)
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS 510
+G+ G A D + + GDI WD KG + S
Sbjct: 286 DGKGAGQAQDKDGVMATATTGSGDITFWDLNKGGRIMS 323
Score = 42 (19.8 bits), Expect = 4.8e-42, Sum P(2) = 4.8e-42
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 437 NFAVLGTAGGWIERFNLQSG 456
N +G GW+E +N+ +G
Sbjct: 199 NKIFVGRKDGWVEIWNVSTG 218
>WB|WBGene00012887 [details] [associations]
symbol:Y45F10D.7 species:6239 "Caenorhabditis elegans"
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006306 "DNA methylation" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007319 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR018391 SMART:SM00564 GO:GO:0006364 GO:GO:0032040
EMBL:AL021492 GeneTree:ENSGT00390000004976 OMA:DGIIACH
RefSeq:NP_502661.3 ProteinModelPortal:O62477 SMR:O62477
STRING:O62477 PaxDb:O62477 EnsemblMetazoa:Y45F10D.7 GeneID:178346
KEGG:cel:CELE_Y45F10D.7 UCSC:Y45F10D.7 CTD:178346
WormBase:Y45F10D.7 HOGENOM:HOG000175599 InParanoid:O62477
NextBio:900754 Uniprot:O62477
Length = 924
Score = 544 (196.6 bits), Expect = 1.4e-73, Sum P(2) = 1.4e-73
Identities = 139/467 (29%), Positives = 231/467 (49%)
Query: 3 IFEPYKAIGYITSSVPFSVQR--LGTENFVTV--SVGKAFHIYNCAKLNLVLVGPQLPKK 58
+F PY+ +G +T V S++ + ++ ++V + YN KL + + L K
Sbjct: 8 LFAPYRFLGVVTGDVAPSIRSTFVAKKSALSVLCPIDNVIMQYNGKKLRAIGMSEPLSDK 67
Query: 59 IRALASYRDYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFI- 117
+ A+AS FAA+G +I + + AK+ ++ L G ++++DI + +
Sbjct: 68 VSAVASSSTSVFAAHGTNITSLAFCRDIKDSIDLGAKIKIMTLIGTQLIAVDISSGIHVI 127
Query: 118 -WAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
+ G++ +L G D F T I HP TYLNK++VGS G +++ N T K ++E
Sbjct: 128 DTSEGGLQMSLLMEG----SDDFEITAICHPSTYLNKIVVGSSTGRMKIINFRTGKVIHE 183
Query: 177 F-KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD 235
F + + ALDVV VG +G++ + NV+ D+ + +F H + +T +AF D
Sbjct: 184 FQRSFDSRITIIEQTTALDVVVVGLENGEVMLFNVKMDKIITSFRHDAK--ITNVAFRDD 241
Query: 236 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
G+ + + +G +++W+LEK+ L I H + I L+F EP+++SAS DNS+++W
Sbjct: 242 GESTMVTADKNGTMAVWDLEKQELIGKITGIHSDEINCLYFVPGEPIMLSASLDNSLRLW 301
Query: 296 IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQR 355
IFD+ DG PR L GHS P I+F H+LSAG+D + R + V ++L
Sbjct: 302 IFDSADGMPRELVRLEGHSKPCASIKFVGKD-HVLSAGKDGSIRKYDVSSLTMRQKLGT- 359
Query: 356 HVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYVWRLQNFVLG-- 413
V + + +AF RE W NV ++ + W+ +N G
Sbjct: 360 -VGQGVKLNKEVQNVAE----MAFGWQ--REAAWNNVFCRQVNDTKITTWQTRNNTSGAF 412
Query: 414 --EH--ILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSG 456
EH + A +S CGNF +G + G I++FN QSG
Sbjct: 413 TLEHDRFKKKVDFIDANATALCVSPCGNFVFIGYSTGHIDQFNAQSG 459
Score = 272 (100.8 bits), Expect = 1.4e-73, Sum P(2) = 1.4e-73
Identities = 112/449 (24%), Positives = 195/449 (43%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR-WEVGCSLVKIVYHRVNGLL 530
A + + ++ D ++S G I W + + ++ ++ L N L+
Sbjct: 497 AADSPITSLSVDQRGKELMSTDAQGHILFWSLSTKAINAKMFKKDVRLGICAPCPSNSLV 556
Query: 531 ATVA-----DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
A VA + VI L D V R+ R FE +++ FS DGKWLL + D +R++D
Sbjct: 557 ALVAIAENGKESVI-LVDTVCHRVARAFETVGNKVNAMTFSSDGKWLLVADNDSYIRVFD 615
Query: 586 VILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGK 645
V ++ ID + ++S + LAT H + VY W N+ +F NI ++ +
Sbjct: 616 VATSQLIDVLLFSKPCISMSYNETGQYLATVHEGERAVYTWANKVLFVAHINIRAHPADY 675
Query: 646 EIVSVKMPSVSSVEG--CQDENSSQPDVHRTDRVPKDSFGLPTFKQ-QIPD-LVTLSLLP 701
+ S M +S+ EG C D + + D+ T + +D + K+ QI + LVT S LP
Sbjct: 676 -LPSWSM--ISTEEGGTC-DIDDDEDDL--TTLMDQD---IKAMKELQIDENLVTFSGLP 726
Query: 702 KSQWQSLINLDIIKARNXXXXXXXXXXXAPFFLPSVPSLSGEILFKPSESTKEDTESLKV 761
S+W +L +L +IK RN APFFL + +L G + + D +S +
Sbjct: 727 SSRWANLPDLALIKERNKPTDAVKKIKQAPFFLSASATLDGFEFETENIGDEMDGDSRYI 786
Query: 762 GNKTKPDIPVSQFIQLLHSCAEMKNF-SAFTDYIKSLSPSTLDMELRML--QIIDHDDHQ 818
+K S F LL + + AF ++++S S +D ++R L + I
Sbjct: 787 TSKRNLLELESSFTTLLRNAKTRDHLLDAFKT-LQNMSLSAIDFQIRTLNPKTIPIFFRM 845
Query: 819 ELDKRPEYLSIELLLDYLIHEISCRNNFEFIQAVIRLFLKIHGETVRCHTKLQDKARKLL 878
L+ + EL+ Y + R + E H +L + ++
Sbjct: 846 LLEVLKTKTNFELVQAYAATATK----------IHRTIMWNASEGASEHEELTEVLEEMA 895
Query: 879 EVQSAVWQKIDKMFQSARCVVSFLSNSQL 907
+VQ W +++ +F VV ++ N+ L
Sbjct: 896 QVQMESWNEMENLFVENMAVVQWIKNALL 924
Score = 39 (18.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 103 GEHILSIDIDGNMFIWA 119
G+ ++S D G++ W+
Sbjct: 511 GKELMSTDAQGHILFWS 527
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 199 (75.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 72/274 (26%), Positives = 126/274 (45%)
Query: 88 TWSRHSAKVNLLLLF--GEHILSIDIDGNMFIW--AFKGIEENL-APVGHVKLDDKFTPT 142
T HS V + G+ + S +D + +W A ++++L G VK +
Sbjct: 871 TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVK-------S 923
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
PD K+ GS++ +++LWN +T + L +G P +A SD
Sbjct: 924 VAFSPDG--KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSD 981
Query: 203 GKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
I + N E TF H + + A+AFS DG+ L+ SG+ I +W+L LQ
Sbjct: 982 TTIKLWNSTTGELQQTFKGHDLW--IRAVAFSPDGKHLV-SGSDDNTIKLWDLATSELQQ 1038
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ E H ++ ++ F ++ L S+S D++IK+W D+ G+ L R GHS +
Sbjct: 1039 SL-EDHSRSVHAVAFSPDDKQLASSSLDSTIKLW--DSATGE--LQRTLEGHSQGVRSVT 1093
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQR 355
F +G+ + S D +L++ + + + L+ R
Sbjct: 1094 FSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGR 1127
Score = 163 (62.4 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 53/220 (24%), Positives = 103/220 (46%)
Query: 144 IMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+ PD +++ GS + ++++W+ +T + L G P ++A G D
Sbjct: 757 VFSPDG--KQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDN 814
Query: 204 KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
I + + E L TF ++ ++AF+ DG+ L AS + I IW+L LQ +
Sbjct: 815 TIDLWDSATGELLQTFEGHPH-SIWSVAFAPDGKEL-ASASDDSTIKIWDLATGELQQTL 872
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
++H ++ S+ F + +L S+S D++IK+W + G+ L + G S + F
Sbjct: 873 -DSHSQSVRSVAFSPDGKLLASSSLDSTIKVW--NPATGE--LQQSLEGRSGWVKSVAFS 927
Query: 324 ANGRHILSAGQDRAFRLFS-----VIQDQQSRELSQRHVA 358
+G+ + S + +L++ ++Q + S R VA
Sbjct: 928 PDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVA 967
Score = 159 (61.0 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 44/158 (27%), Positives = 79/158 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H G V V ++S Y +K+WD +L + V+ + +G LLA
Sbjct: 749 HLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLA 808
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---L 588
+ + D I L+D +++ FEGH I F+ DGK L S+ D +++IWD+ L
Sbjct: 809 SGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGEL 868
Query: 589 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ +D+ H S+ +++ SP+ +LA++ +D + +W
Sbjct: 869 QQTLDS-HSQ-SVRSVAFSPDGKLLASSSLDST-IKVW 903
Score = 153 (58.9 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 59/251 (23%), Positives = 104/251 (41%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
G+H++S D + +W E + H + PD ++ S + +
Sbjct: 1014 GKHLVSGSDDNTIKLWDLATSELQQSLEDH----SRSVHAVAFSPDD--KQLASSSLDST 1067
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
++LW+ +T + +G P ++A DG I + N E T T
Sbjct: 1068 IKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLT-G 1126
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
V ++AFS DG+ L ASG I +W+ L + E H + I S+ F + +
Sbjct: 1127 RSDWVDSVAFSPDGKQL-ASGYYDSTIKLWDSATGELLQTL-EGHSDRIQSVVFSPDGKL 1184
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
L S S D + K+W D G+ LL+ GHS + F +G+ + S+ +L+
Sbjct: 1185 LASGSYDQTAKLW--DPATGE--LLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
Query: 343 VIQDQQSRELS 353
+ + + L+
Sbjct: 1241 PVTGELLQTLN 1251
Score = 152 (58.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 39/156 (25%), Positives = 74/156 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LA 531
H+G V +A L+ S Y I +WD +L +E + V +G LA
Sbjct: 791 HSGTVESLAFSPDGKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELA 850
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ +DD I+++D+ + + + H+ + FS DGK L SS +D ++++W+
Sbjct: 851 SASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGEL 910
Query: 592 IDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 626
++ + +++ SP+ LA+ ++N V LW
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGS-EKNTVKLW 945
Score = 151 (58.2 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 56/223 (25%), Positives = 102/223 (45%)
Query: 406 RLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDM 465
+L + GE + R + V++ T S G + G I+ +N +G + + +
Sbjct: 1069 KLWDSATGE-LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQT---L 1124
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHR 525
+ RS++ V VA + S Y IK+WD +L E ++ V
Sbjct: 1125 TGRSDW-----VDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFS 1179
Query: 526 VNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+G LLA+ + D +L+D +++ FEGH+ + FS DGK L SS ++++W
Sbjct: 1180 PDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Query: 585 DVILARQIDAIH-VDVSITALSLSPNMDVLATAHVDQNGVYLW 626
D + + ++ D S +++ SP+ + LA+ VD +W
Sbjct: 1240 DPVTGELLQTLNDPDESAGSVAFSPDGNRLAS--VDIFDTKIW 1280
Score = 147 (56.8 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-L 530
+H+ V VA L+ S+ IKVW+ +L+ E VK V +G L
Sbjct: 874 SHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKL 933
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA- 589
A+ ++ ++L++ +++ EGH+ + FS DGK L SS D ++++W+
Sbjct: 934 ASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGE 993
Query: 590 -RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+Q H D+ I A++ SP+ L + D N + LW
Sbjct: 994 LQQTFKGH-DLWIRAVAFSPDGKHLVSGS-DDNTIKLW 1029
Score = 137 (53.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 40/157 (25%), Positives = 74/157 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 531
H+ + VA ++S IK+WD +L+ E S+ + + + LA
Sbjct: 1001 HDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLA 1060
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D + R EGH+ + FS DGK L S+ DG++++W+ L +
Sbjct: 1061 SSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNP-LTGE 1119
Query: 592 IDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLW 626
+ S + +++ SP+ LA+ + D + LW
Sbjct: 1120 LQQTLTGRSDWVDSVAFSPDGKQLASGYYDST-IKLW 1155
Score = 135 (52.6 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 36/137 (26%), Positives = 65/137 (47%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V ++ FS DG+ L+ SG+ + IW+ L + + H + SL F + +L
Sbjct: 751 GPVESVVFSPDGKQLV-SGSYDDTVKIWDPATGELLQTL-DGHSGTVESLAFSPDGKLLA 808
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 344
S S DN+I +W D+ G+ LL+ GH + F +G+ + SA D +++ +
Sbjct: 809 SGSYDNTIDLW--DSATGE--LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLA 864
Query: 345 QDQQSRELSQRHVAKRA 361
+ + L + R+
Sbjct: 865 TGELQQTLDSHSQSVRS 881
Score = 133 (51.9 bits), Expect = 4.1e-13, Sum P(2) = 4.1e-13
Identities = 41/162 (25%), Positives = 76/162 (46%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 526
++S +G V VA + S +K+W+ +L E V+ V
Sbjct: 911 QQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP 970
Query: 527 NGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+G LA+ + D I+L++ + + F+GH I FS DGK L+S D ++++WD
Sbjct: 971 DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Query: 586 VILARQIDAIHVDV-SITALSLSPNMDVLATAHVDQNGVYLW 626
+ + ++ S+ A++ SP+ LA++ +D + LW
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDST-IKLW 1071
Score = 117 (46.2 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H + VA + SA IK+WD +L+ + V+ V +G LLA
Sbjct: 833 HPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLA 892
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I++++ + + EG + + FS DGK L S ++++W+
Sbjct: 893 SSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGEL 952
Query: 592 IDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + S+ +++ SP+ LA++ D + LW
Sbjct: 953 LQTLEGHSQSVRSVAFSPDGKQLASSSSDTT-IKLW 987
Score = 80 (33.2 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 252 WNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 311
W+ E++ L++ H + S+ F + L+S S D+++K+W D G+ LL+
Sbjct: 739 WSAEQQTLEN-----HLGPVESVVFSPDGKQLVSGSYDDTVKIW--DPATGE--LLQTLD 789
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQ 354
GHS + F +G+ + S D L+ D + EL Q
Sbjct: 790 GHSGTVESLAFSPDGKLLASGSYDNTIDLW----DSATGELLQ 828
Score = 43 (20.2 bits), Expect = 8.2e-06, Sum P(3) = 8.2e-06
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 614 ATAHVDQN--GVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQD-ENSSQ 668
AT + Q+ G WV FS D ASG E +VK+ + ++ E Q E SQ
Sbjct: 906 ATGELQQSLEGRSGWVKSVAFSPDGK--KLASGSEKNTVKLWNPATGELLQTLEGHSQ 961
Score = 41 (19.5 bits), Expect = 8.1e-14, Sum P(3) = 8.1e-14
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 768 DIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRM 808
D+ S+ Q L + + AF+ K L+ S+LD +++
Sbjct: 1030 DLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKL 1070
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 170 (64.9 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 47/160 (29%), Positives = 78/160 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H+ V V+ + L+ SA G +K+WD L++ E VK +V+ + LLA
Sbjct: 262 HDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLA 321
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI--LA 589
+ +DD ++++D + R +GH D + FS D + + S D ++RIW+ L
Sbjct: 322 SASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLL 381
Query: 590 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNR 629
R H D S+ A+S + + LA+A D V +W R
Sbjct: 382 RHTFEDHED-SVMAVSFAHDSRRLASAS-DGGNVKIWDTR 419
Score = 164 (62.8 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 43/162 (26%), Positives = 78/162 (48%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHR 525
+R+ HN V V + L+ SA +K+WD L++ E + V+ +V+
Sbjct: 466 QRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSH 525
Query: 526 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ LLA+ +DD+ ++++D + EGH DR+ FS D + L S+ DG+++IW
Sbjct: 526 DSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWY 585
Query: 586 VILARQIDAIHVDVSIT-ALSLSPNMDVLATAHVDQNGVYLW 626
+ +L+ S ++LA+A +D V +W
Sbjct: 586 AATGTVQHTFDGSGRVAISLAFSHTSNLLASA-MDDGTVKIW 626
Score = 157 (60.3 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 58/232 (25%), Positives = 104/232 (44%)
Query: 112 DGNMFIW--AFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNIS 169
DG + IW A ++ L GH +++ + + D+ L + S +G++++W+ +
Sbjct: 284 DGTVKIWDTATSFLQNTLE--GH----NEWVKSVVFSHDSRL--LASASDDGTVKIWDTA 335
Query: 170 TKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTA 229
T KG ++A G +D + + TF +V A
Sbjct: 336 TGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTF-EDHEDSVMA 394
Query: 230 LAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASAD 289
++F+ D + L AS + G + IW+ LQ+V+ E HD+ + S+ F + +L SAS D
Sbjct: 395 VSFAHDSRRL-ASASDGGNVKIWDTRTGSLQNVL-EGHDDCVNSVSFSPDSRLLASASDD 452
Query: 290 NSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
++K+W T G L R GH+ + F + R I SA D +++
Sbjct: 453 RTVKIWHAAT--GS--LQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIW 500
Score = 148 (57.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 95/447 (21%), Positives = 179/447 (40%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S +G++++W+ +T +G ++A DG + + +D
Sbjct: 282 SGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKI----WDTATG 337
Query: 218 TFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
T ++G +V ++ FS D + L+ASG++ + IW L+ E H+++++++
Sbjct: 338 TLQRMLKGHNDSVRSVVFSHDSR-LIASGSNDRTVRIWETTTGLLRHTF-EDHEDSVMAV 395
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F + L SAS ++K+W DT G L GH + F + R + SA
Sbjct: 396 SFAHDSRRLASASDGGNVKIW--DTRTGS--LQNVLEGHDDCVNSVSFSPDSRLLASASD 451
Query: 335 DRAFRLFSVIQDQQSRELSQRHVAKRARXXXXXXXXXXXXPVIAFDCAEIRERDWCNV-V 393
DR +++ R L + R+ A D ++ D V +
Sbjct: 452 DRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIAS----ASDDMTVKIWDTATVPL 507
Query: 394 TCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNL 453
++++ +V R F +L ++ T VK +A G+ T G +R N
Sbjct: 508 QNNLESHDNWV-RSVVFSHDSRLLASASDDMT-VKIWD-TATGSLE--NTLEGHDDRVNS 562
Query: 454 QSGISRGSYLDMSERSN------YAHNGEV-----------VGVACDSTNTLMISAGYHG 496
S S S L S + YA G V + +A T+ L+ SA G
Sbjct: 563 VS-FSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDG 621
Query: 497 DIKVWDFKGRDLKSRWEVGCSLVKIVYHR-VNGLLATVAD---DLVIRLFDVVALRMV-- 550
+K+WD + L+ +++ + +I + + ++ L+ V D + + A V
Sbjct: 622 TVKIWDMEIYSLRHTFDLDHEIQRIQFDKSMSSLITNVGRIQLDARSKATEGFASSQVLD 681
Query: 551 -RKFEGHTDRITDFCFSEDGKWLLSSG 576
+ +GH R + S+D W+ +G
Sbjct: 682 RSQAQGHHPRRQGYGLSDDFSWITWNG 708
Score = 144 (55.7 bits), Expect = 5.7e-16, Sum P(3) = 5.7e-16
Identities = 39/116 (33%), Positives = 61/116 (52%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
AV +++FS D + LLAS + G + IW+ LQ+ + E H+ + S+ F + +L S
Sbjct: 265 AVGSVSFSHDSR-LLASASGDGTVKIWDTATSFLQNTL-EGHNEWVKSVVFSHDSRLLAS 322
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
AS D ++K+W DT G L R GH+ + F + R I S DR R++
Sbjct: 323 ASDDGTVKIW--DTATGT--LQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIW 374
Score = 143 (55.4 bits), Expect = 9.3e-14, Sum P(3) = 9.3e-14
Identities = 42/158 (26%), Positives = 78/158 (49%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 531
H V+ V+ + + SA G++K+WD + L++ E V V + + LLA
Sbjct: 388 HEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLA 447
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD---VIL 588
+ +DD ++++ + R EGH D + FS D + + S+ D +++IWD V L
Sbjct: 448 SASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPL 507
Query: 589 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+++ H D + ++ S + +LA+A D V +W
Sbjct: 508 QNNLES-H-DNWVRSVVFSHDSRLLASASDDMT-VKIW 542
Score = 104 (41.7 bits), Expect = 3.6e-11, Sum P(3) = 3.6e-11
Identities = 34/145 (23%), Positives = 61/145 (42%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLL 530
+H+ V V + L+ SA +K+WD L++ E V V + + LL
Sbjct: 513 SHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLL 572
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
A+ +DD ++++ + F+G FS L S+ DG+++IWD+ +
Sbjct: 573 ASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWDMEIYS 632
Query: 591 QIDAIHVDVSITALSLSPNMDVLAT 615
+D I + +M L T
Sbjct: 633 LRHTFDLDHEIQRIQFDKSMSSLIT 657
Score = 78 (32.5 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 25/97 (25%), Positives = 43/97 (44%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ HD A+ S+ F + +L SAS D ++K+W DT L GH+ + F
Sbjct: 260 KGHDRAVGSVSFSHDSRLLASASGDGTVKIW--DTATSF--LQNTLEGHNEWVKSVVFSH 315
Query: 325 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRA 361
+ R + SA D +++ R L + + R+
Sbjct: 316 DSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRS 352
Score = 44 (20.5 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 19/88 (21%), Positives = 36/88 (40%)
Query: 468 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL-KSRWEVGCSLVKIVYHRV 526
R Y + + + + N L + GY I ++ S +G ++V R+
Sbjct: 692 RQGYGLSDDFSWITWNGDNVLWLPPGYRPCISTVSVPPKESGTSVIGLGTKSGRVVSIRL 751
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFE 554
+GL + L++ + LR +KFE
Sbjct: 752 SGLGPSPDAPLIVAKKCIEYLRCEKKFE 779
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 626 WVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSV 658
WV +FS DS + AS + ++VK+ ++V
Sbjct: 475 WVRSVVFSHDSRL--IASASDDMTVKIWDTATV 505
Score = 43 (20.2 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 626 WVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVE 659
WV +FS DS + + AS V + + S+E
Sbjct: 517 WVRSVVFSHDSRLLASASDDMTVKIWDTATGSLE 550
Score = 40 (19.1 bits), Expect = 2.7e-17, Sum P(3) = 2.7e-17
Identities = 21/96 (21%), Positives = 37/96 (38%)
Query: 694 LVTLSLLPKSQWQSLINLDIIKARNX-----XXXXXXXXXXAPFFLPSVPSLSGEILFKP 748
LVT+ LP S + +DI++ F + V ++ G
Sbjct: 1645 LVTIIFLPLSFMAAFFAIDIVEFPKQPDGLHLNFVSSIMSIMAFNVNKVAAVWGRFAKWI 1704
Query: 749 SESTKEDTESLKVGNKTKPDIPVSQFIQLLHSCAEM 784
+E+T S+KV + D + + + SCAE+
Sbjct: 1705 TENTVHAISSMKVADNMVDD---DKKFEAIGSCAEL 1737
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 337 AFRLFSVIQDQQSRELSQRHVAKRAR 362
AF LF + QS+ L+ +H+ +R R
Sbjct: 1781 AFDLF--LGRWQSKSLATKHLPERLR 1804
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 151 (58.2 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+A G D + V +++ F + AVT + FS G LLASG+ + IW +
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFA-GHKDAVTCVNFSPSGH-LLASGSRDKTVRIW-IP 90
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
+ +S + AH + S+HF ++ L++AS D ++K+W +T L S H
Sbjct: 91 NVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVW---STHRQKFLFSL-SQHIN 146
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
C RF +GR I+SA D+ +L+ D+ SRE
Sbjct: 147 WVRCARFSPDGRLIVSASDDKTVKLW----DKTSRE 178
Score = 140 (54.3 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 32/129 (24%), Positives = 59/129 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 531
H G V V + T + +A +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLL 245
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW----DVI 587
T + D +++ D++ R++ GH T FS G++ S G D + +W DV+
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDVV 305
Query: 588 LARQIDAIH 596
R++ +H
Sbjct: 306 DYREVIKVH 314
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 49/243 (20%), Positives = 99/243 (40%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGS 162
+ + S +D + +W K GH K TC+ P +L + GS++ +
Sbjct: 32 KQLASGSMDSCLMVWHMKPQSRAYRFAGH-----KDAVTCVNFSPSGHL--LASGSRDKT 84
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+++W + K + F+ + D + V + + L + +
Sbjct: 85 VRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQH 144
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+ V FS DG+ L+ S + + +W+ R E H + + F +
Sbjct: 145 INW-VRCARFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYCE-HGGFVTYVDFHPSGTC 201
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ +AS DN++K+W T RLL+ HSA + F+ +G ++L+A D ++
Sbjct: 202 IAAASMDNTVKVWDVRTH----RLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILD 257
Query: 343 VIQ 345
+++
Sbjct: 258 LME 260
Score = 129 (50.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 33/134 (24%), Positives = 73/134 (54%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R A+T++ FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAITSVDFSLNTKQL-ASGSMDSCLMVWHM-KPQSRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S S D ++++WI G+ + R H+A + F ++G+ +++A D+ +++S
Sbjct: 77 ASGSRDKTVRIWI-PNVKGESTVFR---AHTATVRSVHFCSDGQSLVTASDDKTVKVWST 132
Query: 344 IQDQQSRELSQRHV 357
+ + LSQ H+
Sbjct: 133 HRQKFLFSLSQ-HI 145
Score = 128 (50.1 bits), Expect = 8.5e-16, Sum P(2) = 8.5e-16
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L++SA +K+WD R+ + S E G + + +H +A + D ++++DV
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRT 218
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
R+++ ++ H+ + F G +LL++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 606 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 653
S + A+ D+ V +W SN D +E++ V P
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW--------KSNFD-VVDYREVIKVHRP 316
Score = 125 (49.1 bits), Expect = 0.00021, P = 0.00021
Identities = 40/182 (21%), Positives = 77/182 (42%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ S + ++++W+ +K L+ P ++ D + + + +
Sbjct: 118 LVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWD-KTS 176
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
E V G VT + F G +A+ + + +W++ RL + H A+ +
Sbjct: 177 RECVHSYCEHGGFVTYVDFHPSGT-CIAAASMDNTVKVWDVRTHRLLQHY-QLHSAAVNA 234
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
L F + L++AS+D+++K I D +G RLL GH P + F G + S G
Sbjct: 235 LSFHPSGNYLLTASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 334 QD 335
D
Sbjct: 291 SD 292
Score = 90 (36.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 24/78 (30%), Positives = 40/78 (51%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H +AI S+ F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQS---RAYRF-AGHKDAVTCVNFSP 71
Query: 325 NGRHILSAG-QDRAFRLF 341
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 53 (23.7 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 33/141 (23%), Positives = 51/141 (36%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
+ MD VW ++ L +H + AV A + GN+ + ++ ++
Sbjct: 202 IAAASMDNT-VKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLLTASSDSTLKIL 256
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
+L G R Y + + H G VA T S G + VW KS
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW-------KSN 301
Query: 512 WEVGCSLVKIVYHRVNGLLAT 532
++V I HR LAT
Sbjct: 302 FDVVDYREVIKVHRPPAPLAT 322
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 13/48 (27%), Positives = 19/48 (39%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 350
DP L R GH + F N + + S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHM--KPQSR 53
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 149 (57.5 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 48/156 (30%), Positives = 77/156 (49%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+A G D + V +++ FT + AVT + FS G LLASG+ + IW +
Sbjct: 65 LASGSMDSCLMVWHMKPQSRAYRFT-GHKDAVTCVNFSPSGH-LLASGSRDKTVRIW-VP 121
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
+ +S + AH + S+HF ++ ++AS D +IK+W +T L S H
Sbjct: 122 NIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVW---STHRQKFLFSL-SQHIN 177
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
C +F +GR I+SA D+ +L+ D+ SRE
Sbjct: 178 WVRCAKFSPDGRLIVSASDDKTVKLW----DKTSRE 209
Score = 145 (56.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 43/195 (22%), Positives = 89/195 (45%)
Query: 151 LNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG--KIHVH 208
+ ++ GS + L +W++ + + Y F G P+ ++A G D +I V
Sbjct: 62 MKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVP 121
Query: 209 NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
N++ E V H+ V ++ F SDGQ + + + I +W+ +++ + + H
Sbjct: 122 NIK-GESTVFRAHT--ATVRSVHFCSDGQSFVTA-SDDKTIKVWSTHRQKFLFSLSQ-HI 176
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
N + F + +++SAS D ++K+W D T + + H + F+ +G
Sbjct: 177 NWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRE--CVHSYCEHGGFVTYVDFHPSGTC 232
Query: 329 ILSAGQDRAFRLFSV 343
+ +AG D +++ V
Sbjct: 233 VAAAGMDNTVKVWDV 247
Score = 138 (53.6 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 531
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 217 HGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 276
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 41/181 (22%), Positives = 77/181 (42%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ S + ++++W+ +K L+ P ++ D + + + +
Sbjct: 150 VTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSR 208
Query: 215 ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
E V G VT + F G + A+G + + +W++ RL + H A+ +L
Sbjct: 209 ECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNAL 266
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F + L++AS+D+++K I D +G RLL GH P + F G + S G
Sbjct: 267 SFHPSGNYLVTASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGS 322
Query: 335 D 335
D
Sbjct: 323 D 323
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 48/243 (19%), Positives = 97/243 (39%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGS 162
+ + S +D + +W K GH K TC+ P +L + GS++ +
Sbjct: 63 KQLASGSMDSCLMVWHMKPQSRAYRFTGH-----KDAVTCVNFSPSGHL--LASGSRDKT 115
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+++W + K + F+ D I V + + L + +
Sbjct: 116 VRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQH 175
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+ V FS DG+ L+ S + + +W+ R E H + + F +
Sbjct: 176 INW-VRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYCE-HGGFVTYVDFHPSGTC 232
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ +A DN++K+W T RLL+ HSA + F+ +G ++++A D ++
Sbjct: 233 VAAAGMDNTVKVWDVRTH----RLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILD 288
Query: 343 VIQ 345
+++
Sbjct: 289 LME 291
Score = 125 (49.1 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 33/134 (24%), Positives = 71/134 (52%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R AVT + FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 50 RDAVTCVDFSFNMKQL-ASGSMDSCLMVWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLL 107
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S S D ++++W+ G+ + R H+A + F ++G+ ++A D+ +++S
Sbjct: 108 ASGSRDKTVRIWV-PNIKGESTVFR---AHTATVRSVHFCSDGQSFVTASDDKTIKVWST 163
Query: 344 IQDQQSRELSQRHV 357
+ + LSQ H+
Sbjct: 164 HRQKFLFSLSQ-HI 176
Score = 125 (49.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 37/150 (24%), Positives = 65/150 (43%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 530
AH V V S ++A IKVW + + V+ +G L+
Sbjct: 132 AHTATVRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 191
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 192 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHR 251
Query: 591 QIDAIHV-DVSITALSLSPNMDVLATAHVD 619
+ + ++ ALS P+ + L TA D
Sbjct: 252 LLQHYQLHSAAVNALSFHPSGNYLVTASSD 281
Score = 123 (48.4 bits), Expect = 3.1e-15, Sum P(2) = 3.1e-15
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 190 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRT 249
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 250 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 309
Query: 606 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 653
S + A+ D+ V +W SN D G E++ V+ P
Sbjct: 310 FSRTGEYFASGGSDEQ-VMVW--------KSNFDVIDYG-EVLRVQRP 347
Score = 82 (33.9 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H +A+ + F N L S S D+ + +W R RF +GH C+ F
Sbjct: 47 KGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQS---RAYRF-TGHKDAVTCVNFSP 102
Query: 325 NGRHILSAG-QDRAFRLF 341
+G H+L++G +D+ R++
Sbjct: 103 SG-HLLASGSRDKTVRIW 119
Score = 55 (24.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 26/110 (23%), Positives = 40/110 (36%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
V MD VW ++ L +H + AV A + GN+ V ++ ++
Sbjct: 233 VAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLVTASSDSTLKIL 287
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
+L G R Y + + H G VA T S G + VW
Sbjct: 288 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 329
Score = 50 (22.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 350
DP L R GH C+ F N + + S D ++ + QSR
Sbjct: 39 DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHM--KPQSR 84
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 151 (58.2 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 29/99 (29%), Positives = 52/99 (52%)
Query: 487 TLMISAGYHGDIKVWDFKGRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 545
T + SAG +K+WD + L ++V C + + +H + L T + D +++ D++
Sbjct: 199 TCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLI 258
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
R++ +GHT + FS+DG+ L S G D + IW
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 137 (53.3 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 43/171 (25%), Positives = 75/171 (43%)
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDG 236
FKG P +A D + + +++ + + VT+L FS G
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQG 72
Query: 237 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 296
LLAS + + +W L+++ S + AH + S+ F A+ +L++AS D SIK+W
Sbjct: 73 N-LLASASRDRTVRLWVLDRKGKSSEFK-AHTAPVRSVDFSADGQLLVTASEDKSIKVWS 130
Query: 297 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
R L H+ C +F +GR I+S +D+ +++ Q
Sbjct: 131 MFRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 43/183 (23%), Positives = 84/183 (45%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVRY 212
++ S++ S+++W++ ++ LY P ++ V CS+ K I + +
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTIKIWDTTN 175
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ + F+ S+ G + F+ +G +AS S + IW++ +L + H +
Sbjct: 176 KQCVNNFSDSV-GFANFVDFNPNGT-CIASAGSDHAVKIWDIRMNKLLQHY-QVHSCGVN 232
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
L F L++AS+D ++KM D +G RL+ GH+ P + F +G + S
Sbjct: 233 CLSFHPLGNSLVTASSDGTVKM--LDLIEG--RLIYTLQGHTGPVFTVSFSKDGELLTSG 288
Query: 333 GQD 335
G D
Sbjct: 289 GAD 291
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 55/245 (22%), Positives = 101/245 (41%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSL 163
+ I + D + +W+ K VGH D T + P N + S++ ++
Sbjct: 31 KQIATASWDTFLMLWSLKPHARAYRYVGH---KDVVT-SLQFSPQG--NLLASASRDRTV 84
Query: 164 QLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV---RYDEELVTFT 220
+LW + K K EFK ++ D I V ++ R+ L T
Sbjct: 85 RLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHT 144
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
H +R A FS DG+ L+ S + I IW+ ++ + ++ A + F N
Sbjct: 145 HWVRCA----KFSPDGR-LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF-VDFNPNG 198
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
+ SA +D+++K+W +LL+ HS C+ F+ G +++A D ++
Sbjct: 199 TCIASAGSDHAVKIWDIRMN----KLLQHYQVHSCGVNCLSFHPLGNSLVTASSDGTVKM 254
Query: 341 FSVIQ 345
+I+
Sbjct: 255 LDLIE 259
Score = 121 (47.7 bits), Expect = 8.5e-07, Sum P(2) = 8.5e-07
Identities = 41/162 (25%), Positives = 72/162 (44%)
Query: 463 LDMSERSNY--AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLV 519
LD +S+ AH V V + L+++A IKVW F+ R L S + V
Sbjct: 89 LDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYR-HTHWV 147
Query: 520 KIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ +G L+ + ++D I+++D + V F F+ +G + S+G D
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSD 207
Query: 579 GSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVD 619
+++IWD+ + + + V + LS P + L TA D
Sbjct: 208 HAVKIWDIRMNKLLQHYQVHSCGVNCLSFHPLGNSLVTASSD 249
Score = 120 (47.3 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 38/158 (24%), Positives = 72/158 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRVNG-L 529
H V + L+ SA +++W D KG+ S ++ + V+ V +G L
Sbjct: 59 HKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKS--SEFKAHTAPVRSVDFSADGQL 116
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L T ++D I+++ + R + HT + FS DG+ ++S D +++IWD
Sbjct: 117 LVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK 176
Query: 590 RQIDAIHVDVSITA-LSLSPNMDVLATAHVDQNGVYLW 626
+ ++ V + +PN +A+A D + V +W
Sbjct: 177 QCVNNFSDSVGFANFVDFNPNGTCIASAGSD-HAVKIW 213
Score = 75 (31.5 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 26/94 (27%), Positives = 42/94 (44%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H AI S F N + +AS D + +W + R R+ GH ++F
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLW---SLKPHARAYRY-VGHKDVVTSLQFSP 70
Query: 325 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
G + SA +DR RL+ + + +S E + H A
Sbjct: 71 QGNLLASASRDRTVRLWVLDRKGKSSEF-KAHTA 103
Score = 47 (21.6 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 21/99 (21%), Positives = 38/99 (38%)
Query: 404 VWRLQ-NFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSY 462
+W ++ N +L + + C V + GN V ++ G ++ +L G R Y
Sbjct: 212 IWDIRMNKLLQHYQVHSC-----GVNCLSFHPLGNSLVTASSDGTVKMLDLIEG--RLIY 264
Query: 463 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
+ H G V V+ L+ S G + +W
Sbjct: 265 ------TLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
Score = 46 (21.3 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
DP L R GH A F N + I +A D L+S+
Sbjct: 7 DPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSL 47
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 148 (57.2 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 47/156 (30%), Positives = 76/156 (48%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+A G D + V +++ FT + AVT + FS G LLASG+ + IW +
Sbjct: 34 LASGSMDSCLMVWHMKPQSRAYRFT-GHKDAVTCVNFSPSGH-LLASGSRDKTVRIW-VP 90
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
+ +S + AH + S+HF ++ ++AS D ++K+W T L S H
Sbjct: 91 NVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW---ATHRQKFLFSL-SQHIN 146
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
C +F +GR I+SA D+ +L+ D+ SRE
Sbjct: 147 WVRCAKFSPDGRLIVSASDDKTVKLW----DKSSRE 178
Score = 140 (54.3 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 47/206 (22%), Positives = 93/206 (45%)
Query: 142 TCIMHPDTYLN--KVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVG 199
TC+ D +N ++ GS + L +W++ + + Y F G P+ ++A G
Sbjct: 23 TCV---DFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASG 79
Query: 200 CSDG--KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKR 257
D +I V NV+ E V H+ V ++ F SDGQ + + + + +W ++
Sbjct: 80 SRDKTVRIWVPNVK-GESTVFRAHT--ATVRSVHFCSDGQSFVTA-SDDKTVKVWATHRQ 135
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
+ + + H N + F + +++SAS D ++K+W D + + + H
Sbjct: 136 KFLFSLSQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW--DKSSRE--CVHSYCEHGGFV 190
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSV 343
+ F+ +G I +AG D +++ V
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVWDV 216
Score = 137 (53.3 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 245
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 126 (49.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 32/141 (22%), Positives = 69/141 (48%)
Query: 488 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 159 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 606 LSPNMDVLATAHVDQNGVYLW 626
S + A+ D+ V +W
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW 298
Score = 123 (48.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 32/134 (23%), Positives = 71/134 (52%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R AVT + FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAVTCVDFSINTKQL-ASGSMDSCLMVWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLL 76
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S S D ++++W+ G+ + R H+A + F ++G+ ++A D+ ++++
Sbjct: 77 ASGSRDKTVRIWV-PNVKGESTVFR---AHTATVRSVHFCSDGQSFVTASDDKTVKVWAT 132
Query: 344 IQDQQSRELSQRHV 357
+ + LSQ H+
Sbjct: 133 HRQKFLFSLSQ-HI 145
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 47/243 (19%), Positives = 96/243 (39%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGS 162
+ + S +D + +W K GH K TC+ P +L + GS++ +
Sbjct: 32 KQLASGSMDSCLMVWHMKPQSRAYRFTGH-----KDAVTCVNFSPSGHL--LASGSRDKT 84
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+++W + K + F+ D + V + L + +
Sbjct: 85 VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQH 144
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+ V FS DG+ L+ S + + +W+ R E H + + F +
Sbjct: 145 INW-VRCAKFSPDGR-LIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVDFHPSGTC 201
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ +A DN++K+W T RLL+ HSA + F+ +G ++++A D ++
Sbjct: 202 IAAAGMDNTVKVWDVRTH----RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILD 257
Query: 343 VIQ 345
+++
Sbjct: 258 LME 260
Score = 122 (48.0 bits), Expect = 0.00045, P = 0.00045
Identities = 41/181 (22%), Positives = 75/181 (41%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ S + ++++W +K L+ P ++ D + + + +
Sbjct: 119 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSR 177
Query: 215 ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
E V G VT + F G + A+G + + +W++ RL + H A+ L
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNGL 235
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F + L++AS+D+++K I D +G RLL GH P + F G + S G
Sbjct: 236 SFHPSGNYLITASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGS 291
Query: 335 D 335
D
Sbjct: 292 D 292
Score = 116 (45.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 35/150 (23%), Positives = 64/150 (42%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 530
AH V V S ++A +KVW + + V+ +G L+
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 161 VSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR 220
Query: 591 QIDAIHV-DVSITALSLSPNMDVLATAHVD 619
+ + ++ LS P+ + L TA D
Sbjct: 221 LLQHYQLHSAAVNGLSFHPSGNYLITASSD 250
Score = 84 (34.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H +A+ + F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 325 NGRHILSAG-QDRAFRLF 341
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 52 (23.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 14/48 (29%), Positives = 20/48 (41%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 350
DP L R GH C+ F N + + S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHM--KPQSR 53
Score = 49 (22.3 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 23/110 (20%), Positives = 39/110 (35%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
+ MD VW ++ L +H + AV + GN+ + ++ ++
Sbjct: 202 IAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNGLSFHPSGNYLITASSDSTLKIL 256
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
+L G R Y + + H G VA T S G + VW
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 144 (55.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 44/189 (23%), Positives = 86/189 (45%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG--KIHVHNVRYDE 214
GS + L +W++ + + Y F G P+ ++A G D +I V NV+ E
Sbjct: 37 GSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVK-GE 95
Query: 215 ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
V H+ V ++ F SDGQ + + + + +W+ +++ + + H N +
Sbjct: 96 STVFRAHT--ATVRSVHFCSDGQSFVTA-SDDKTVKVWSTHRQKFLFSLSQ-HINWVRCA 151
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F + +++SAS D ++K+W D T + + H + F+ +G I +AG
Sbjct: 152 KFSPDGRLIVSASDDKTVKLW--DKTSRE--CVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 335 DRAFRLFSV 343
D +++ V
Sbjct: 208 DNTVKVWDV 216
Score = 142 (55.0 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 46/156 (29%), Positives = 76/156 (48%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+A G D + V +++ F + AVT + FS G LLASG+ + IW +
Sbjct: 34 LASGSMDSCLMVWHMKPQTRAYRFA-GHKDAVTCVNFSPSGH-LLASGSRDKTVRIW-VP 90
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
+ +S + AH + S+HF ++ ++AS D ++K+W +T L S H
Sbjct: 91 NVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW---STHRQKFLFSL-SQHIN 146
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
C +F +GR I+SA D+ +L+ D+ SRE
Sbjct: 147 WVRCAKFSPDGRLIVSASDDKTVKLW----DKTSRE 178
Score = 138 (53.6 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 531
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLV 245
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 128 (50.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 33/134 (24%), Positives = 72/134 (53%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R AVT++ FS + + L ASG+ + +W++ K + ++ H +A+ ++F + +L
Sbjct: 19 RDAVTSVDFSLNTKQL-ASGSMDSCLMVWHM-KPQTRAYRFAGHKDAVTCVNFSPSGHLL 76
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S S D ++++W+ G+ + R H+A + F ++G+ ++A D+ +++S
Sbjct: 77 ASGSRDKTVRIWV-PNVKGESTVFR---AHTATVRSVHFCSDGQSFVTASDDKTVKVWST 132
Query: 344 IQDQQSRELSQRHV 357
+ + LSQ H+
Sbjct: 133 HRQKFLFSLSQ-HI 145
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 41/181 (22%), Positives = 77/181 (42%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ S + ++++W+ +K L+ P ++ D + + + +
Sbjct: 119 VTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTSR 177
Query: 215 ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
E V G VT + F G + A+G + + +W++ RL + H A+ +L
Sbjct: 178 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNAL 235
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F + L++AS+D+++K I D +G RLL GH P + F G + S G
Sbjct: 236 SFHPSGNYLVTASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGS 291
Query: 335 D 335
D
Sbjct: 292 D 292
Score = 125 (49.1 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 36/150 (24%), Positives = 65/150 (43%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 530
AH V V S ++A +KVW + + V+ +G L+
Sbjct: 101 AHTATVRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLI 160
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
+ +DD ++L+D + V + H +T F G + ++GMD ++++WDV R
Sbjct: 161 VSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHR 220
Query: 591 QIDAIHV-DVSITALSLSPNMDVLATAHVD 619
+ + ++ ALS P+ + L TA D
Sbjct: 221 LLQHYQLHSAAVNALSFHPSGNYLVTASSD 250
Score = 124 (48.7 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 218
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 606 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 653
S + A+ D+ V +W SN D G E++ V+ P
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW--------KSNFDIVDYG-EVLRVQRP 316
Score = 89 (36.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H +A+ S+ F N L S S D+ + +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKP---QTRAYRF-AGHKDAVTCVNFSP 71
Query: 325 NGRHILSAG-QDRAFRLF 341
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 54 (24.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 25/110 (22%), Positives = 40/110 (36%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
+ MD VW ++ L +H + AV A + GN+ V ++ ++
Sbjct: 202 IAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNALSFHPSGNYLVTASSDSTLKIL 256
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
+L G R Y + + H G VA T S G + VW
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 41 (19.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
DP L R GH + F N + + S D
Sbjct: 8 DPSLERHFKGHRDAVTSVDFSLNTKQLASGSMD 40
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 141 (54.7 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 45/150 (30%), Positives = 73/150 (48%)
Query: 202 DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
D + V +++ FT + AVT + FS G LLASG+ + IW + + +S
Sbjct: 2 DSCLMVWHMKPQSRAYRFT-GHKDAVTCVNFSPSGH-LLASGSRDKTVRIW-VPNVKGES 58
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ AH + S+HF ++ ++AS D ++K+W T L S H C +
Sbjct: 59 TVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVW---ATHRQKFLFSL-SQHINWVRCAK 114
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
F +GR I+SA D+ +L+ D+ SRE
Sbjct: 115 FSPDGRLIVSASDDKTVKLW----DKSSRE 140
Score = 137 (53.3 bits), Expect = 8.8e-16, Sum P(2) = 8.8e-16
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 148 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLI 207
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 208 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
Score = 126 (49.4 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 32/141 (22%), Positives = 69/141 (48%)
Query: 488 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L++SA +K+WD R+ + S E G + + +H +A D ++++DV
Sbjct: 121 LIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRT 180
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
R+++ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 181 HRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 240
Query: 606 LSPNMDVLATAHVDQNGVYLW 626
S + A+ D+ V +W
Sbjct: 241 FSRTGEYFASGGSDEQ-VMVW 260
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 41/181 (22%), Positives = 75/181 (41%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ S + ++++W +K L+ P ++ D + + + +
Sbjct: 81 VTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KSSR 139
Query: 215 ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
E V G VT + F G + A+G + + +W++ RL + H A+ L
Sbjct: 140 ECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN-TVKVWDVRTHRLLQHY-QLHSAAVNGL 197
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F + L++AS+D+++K I D +G RLL GH P + F G + S G
Sbjct: 198 SFHPSGNYLITASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGS 253
Query: 335 D 335
D
Sbjct: 254 D 254
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 46/236 (19%), Positives = 93/236 (39%)
Query: 111 IDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGSLQLWNIS 169
+D + +W K GH K TC+ P +L + GS++ ++++W +
Sbjct: 1 MDSCLMVWHMKPQSRAYRFTGH-----KDAVTCVNFSPSGHL--LASGSRDKTVRIWVPN 53
Query: 170 TKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTA 229
K + F+ D + V + L + + + V
Sbjct: 54 VKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINW-VRC 112
Query: 230 LAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASAD 289
FS DG+ L+ S + + +W+ R E H + + F + + +A D
Sbjct: 113 AKFSPDGR-LIVSASDDKTVKLWDKSSRECVHSYCE-HGGFVTYVDFHPSGTCIAAAGMD 170
Query: 290 NSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
N++K+W T RLL+ HSA + F+ +G ++++A D ++ +++
Sbjct: 171 NTVKVWDVRTH----RLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLME 222
Score = 92 (37.4 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 22/109 (20%), Positives = 57/109 (52%)
Query: 249 ISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLR 308
+ +W++ K + ++ H +A+ ++F + +L S S D ++++W+ G+ + R
Sbjct: 5 LMVWHM-KPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWV-PNVKGESTVFR 62
Query: 309 FRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
H+A + F ++G+ ++A D+ ++++ + + LSQ H+
Sbjct: 63 ---AHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQ-HI 107
Score = 49 (22.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 23/110 (20%), Positives = 39/110 (35%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
+ MD VW ++ L +H + AV + GN+ + ++ ++
Sbjct: 164 IAAAGMDNT-VKVWDVRTHRLLQHYQL----HSAAVNGLSFHPSGNYLITASSDSTLKIL 218
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
+L G R Y + + H G VA T S G + VW
Sbjct: 219 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 260
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 142 (55.0 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 35/150 (23%), Positives = 80/150 (53%)
Query: 208 HNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
H+V D L R A+T++ FS + + L ASG+ + IW++ K ++++ H
Sbjct: 4 HSVEEDPSLERHFRGHRDAITSVDFSLNKKQL-ASGSMDSCLKIWSM-KPQMRAYCLVGH 61
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 327
+A++ + F + ++ S S D ++ +W+ + G+ + + H+A + F ++G+
Sbjct: 62 KDAVMCVQFSPSGHLVASGSRDKTVCLWV-PSVKGESTVFK---AHTATVRSVHFSSDGQ 117
Query: 328 HILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
+++A D+ ++++V + + LSQ H+
Sbjct: 118 SLVTASDDKTIKVWTVHRQKFLFSLSQ-HI 146
Score = 136 (52.9 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
Identities = 41/128 (32%), Positives = 66/128 (51%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
+ AV + FS G L+ASG+ + +W + + +S + +AH + S+HF ++ L
Sbjct: 62 KDAVMCVQFSPSGH-LVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSL 119
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
++AS D +IK+W T + L S H C RF +GR I SA D+ +L+
Sbjct: 120 VTASDDKTIKVW----TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLW-- 173
Query: 344 IQDQQSRE 351
D+ SRE
Sbjct: 174 --DKTSRE 179
Score = 133 (51.9 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 38/160 (23%), Positives = 74/160 (46%)
Query: 488 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L+ SA +K+WD R+ + S E G + +H +A D ++++DV
Sbjct: 160 LIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRM 219
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
R+++ ++ HT + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 220 NRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVA 279
Query: 606 LSPNMDVLATAHVDQNGVYLW-VNRCMFSGDSNIDSYASG 644
S D A+ D+ V +W N D + ++ SG
Sbjct: 280 FSRTGDFFASGGSDEQ-VMVWKTNFSAADYDGVLKTHKSG 318
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 42/182 (23%), Positives = 76/182 (41%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ S + ++++W + +K L+ P ++A D + + +
Sbjct: 119 LVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSR 178
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
E + +F G + F G + A+G + +W++ RL + H A+ S
Sbjct: 179 ECIHSFCEH-GGFANHVEFHPSGTCIAAAGTDK-TVKVWDVRMNRLLQHY-QVHTAAVNS 235
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
L F + L++AS D+++K I D +G RLL GH P C+ F G S G
Sbjct: 236 LSFHPSGNYLITASNDSTLK--ILDLLEG--RLLYTLHGHQGPATCVAFSRTGDFFASGG 291
Query: 334 QD 335
D
Sbjct: 292 SD 293
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/243 (21%), Positives = 97/243 (39%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMH-PDTYLNKVIVGSQEGS 162
+ + S +D + IW+ K VGH K C+ P +L V GS++ +
Sbjct: 33 KQLASGSMDSCLKIWSMKPQMRAYCLVGH-----KDAVMCVQFSPSGHL--VASGSRDKT 85
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+ LW S K + FK + D I V V + L + +
Sbjct: 86 VCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQH 145
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+ V FS DG+ L+AS + + +W+ R E H + F +
Sbjct: 146 INW-VRCARFSPDGR-LIASASDDKTVKLWDKTSRECIHSFCE-HGGFANHVEFHPSGTC 202
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ +A D ++K+W D RLL+ H+A + F+ +G ++++A D ++
Sbjct: 203 IAAAGTDKTVKVW--DVRMN--RLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILD 258
Query: 343 VIQ 345
+++
Sbjct: 259 LLE 261
Score = 127 (49.8 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 29/113 (25%), Positives = 51/113 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H G V + T + +AG +KVWD + L ++V + V + +H L
Sbjct: 187 HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLI 246
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T ++D +++ D++ R++ GH T FS G + S G D + +W
Sbjct: 247 TASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVW 299
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 36/150 (24%), Positives = 65/150 (43%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LL 530
AH V V S +++A IKVW + + V+ +G L+
Sbjct: 102 AHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLI 161
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
A+ +DD ++L+D + + F H F G + ++G D ++++WDV + R
Sbjct: 162 ASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNR 221
Query: 591 QIDAIHVDVS-ITALSLSPNMDVLATAHVD 619
+ V + + +LS P+ + L TA D
Sbjct: 222 LLQHYQVHTAAVNSLSFHPSGNYLITASND 251
Score = 44 (20.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 19/84 (22%), Positives = 31/84 (36%)
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 485
AV + + GN+ + + ++ +L G R Y + + H G VA T
Sbjct: 232 AVNSLSFHPSGNYLITASNDSTLKILDLLEG--RLLY------TLHGHQGPATCVAFSRT 283
Query: 486 NTLMISAGYHGDIKVW--DFKGRD 507
S G + VW +F D
Sbjct: 284 GDFFASGGSDEQVMVWKTNFSAAD 307
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 143 (55.4 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 49/208 (23%), Positives = 96/208 (46%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVRY 212
++ S++ S+++W++ ++ LY P ++ V CS+ K I + +
Sbjct: 117 LVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTIKIWDTTS 175
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ + F+ S+ G + FS +G +AS S + IW++ RL + H +
Sbjct: 176 KQCVNNFSDSV-GFANFVDFSPNGT-CIASAGSDHAVRIWDIRMNRLLQHY-QVHSCGVN 232
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
L F + L++AS+D ++K I D +G RL+ GH+ P + F +G S
Sbjct: 233 CLSFHPSGNSLVTASSDGTVK--ILDLVEG--RLIYTLQGHTGPVFTVSFSKDGELFTSG 288
Query: 333 GQDRAFRLFSVIQDQ-QSRELSQRHVAK 359
G D ++ +Q R+ S+R++ +
Sbjct: 289 GADAQVLVWRTSFNQVHYRDPSKRNLKR 316
Score = 140 (54.3 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 27/99 (27%), Positives = 50/99 (50%)
Query: 487 TLMISAGYHGDIKVWDFKGRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 545
T + SAG +++WD + L ++V C + + +H L T + D +++ D+V
Sbjct: 199 TCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLV 258
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
R++ +GHT + FS+DG+ S G D + +W
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Score = 135 (52.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDG 236
FKG P +A D + + +++ + + VT+L FS G
Sbjct: 14 FKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQG 72
Query: 237 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 296
LLAS + + +W L+++ S + AH + S+ F A+ L++AS D SIK+W
Sbjct: 73 N-LLASASRDKTVRLWVLDRKGKSSEFK-AHTAPVRSVDFSADGQFLVTASEDKSIKVWS 130
Query: 297 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
R L H+ C +F +GR I+S +D+ +++ Q
Sbjct: 131 MYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQ 177
Score = 130 (50.8 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 42/162 (25%), Positives = 73/162 (45%)
Query: 463 LDMSERSNY--AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLV 519
LD +S+ AH V V + +++A IKVW ++ R L S + V
Sbjct: 89 LDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYR-HTHWV 147
Query: 520 KIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ +G L+ + ++D I+++D + + V F FS +G + S+G D
Sbjct: 148 RCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSD 207
Query: 579 GSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVD 619
++RIWD+ + R + V + LS P+ + L TA D
Sbjct: 208 HAVRIWDIRMNRLLQHYQVHSCGVNCLSFHPSGNSLVTASSD 249
Score = 127 (49.8 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 31/135 (22%), Positives = 72/135 (53%)
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
D L + + A+T+ FS + + + A+ + + +W+L K ++ H + +
Sbjct: 7 DPILERYFKGHKAAITSADFSPNCKQI-ATASWDTFLMLWSL-KPHARAYRYVGHKDVVT 64
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
SL F +L SAS D ++++W+ D + F++ H+AP + F A+G+ +++A
Sbjct: 65 SLQFSPQGNLLASASRDKTVRLWVLDRKG---KSSEFKA-HTAPVRSVDFSADGQFLVTA 120
Query: 333 GQDRAFRLFSVIQDQ 347
+D++ +++S+ + +
Sbjct: 121 SEDKSIKVWSMYRQR 135
Score = 127 (49.8 bits), Expect = 0.00016, P = 0.00016
Identities = 54/245 (22%), Positives = 101/245 (41%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSL 163
+ I + D + +W+ K VGH D T + P N + S++ ++
Sbjct: 31 KQIATASWDTFLMLWSLKPHARAYRYVGH---KDVVT-SLQFSPQG--NLLASASRDKTV 84
Query: 164 QLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV---RYDEELVTFT 220
+LW + K K EFK + D I V ++ R+ L T
Sbjct: 85 RLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHT 144
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
H +R A FS DG+ L+ S + I IW+ ++ + ++ A + F N
Sbjct: 145 HWVRCA----KFSPDGR-LIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANF-VDFSPNG 198
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
+ SA +D+++++W RLL+ HS C+ F+ +G +++A D ++
Sbjct: 199 TCIASAGSDHAVRIWDIRMN----RLLQHYQVHSCGVNCLSFHPSGNSLVTASSDGTVKI 254
Query: 341 FSVIQ 345
+++
Sbjct: 255 LDLVE 259
Score = 72 (30.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H AI S F N + +AS D + +W + R R+ GH ++F
Sbjct: 15 KGHKAAITSADFSPNCKQIATASWDTFLMLW---SLKPHARAYRY-VGHKDVVTSLQFSP 70
Query: 325 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
G + SA +D+ RL+ + + +S E + H A
Sbjct: 71 QGNLLASASRDKTVRLWVLDRKGKSSEF-KAHTA 103
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 151 (58.2 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ +H + + T + D R++DV VR F GHT+ + S DG+WL S G DG
Sbjct: 607 VEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLGHTNSVNCLAVSPDGRWLASGGEDGI 666
Query: 581 LRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ +WD+ R++ ++ H S+ +L+ S + VL + D N V +W
Sbjct: 667 ICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCAD-NSVRVW 713
Score = 148 (57.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 59/208 (28%), Positives = 94/208 (45%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVK--LDDKFTPTCIMHPDTYLNKVIVGSQEG 161
+++LS D + +W+ ++ GH + D KF+P + H Y + S +
Sbjct: 530 KYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSP--LGH---YF---VTASHDQ 581
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFT- 220
+ +LW L F G P + V G SD + +V + F
Sbjct: 582 TARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVRVFLG 641
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNA-IISLHFFA 278
H+ +V LA S DG+ LASG G+I +W++ RRL+S+ H A + SL F
Sbjct: 642 HT--NSVNCLAVSPDGR-WLASGGEDGIICVWDIGSGRRLKSM--RGHARASLYSLAFSR 696
Query: 279 NEPVLMSASADNSIKMWIF--DTTDGDP 304
+ VL+S ADNS+++W +T D P
Sbjct: 697 DGTVLVSGCADNSVRVWDVKKNTNDAGP 724
Score = 129 (50.5 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 34/140 (24%), Positives = 68/140 (48%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE---------- 265
+ TF H+ +T + F+ D L+A+G I +W+L+ + L+SV++
Sbjct: 454 MYTF-HNTNNNMTCIEFNDDST-LVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTR 511
Query: 266 ---AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 322
H + + F + L+S S D ++++W DT L+ ++ GH+ P ++F
Sbjct: 512 KLIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTA---LVSYK-GHTQPVWDVKF 567
Query: 323 YANGRHILSAGQDRAFRLFS 342
G + ++A D+ RL++
Sbjct: 568 SPLGHYFVTASHDQTARLWA 587
Score = 100 (40.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 31/123 (25%), Positives = 56/123 (45%)
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
HS G V ++FS D + LL S + + +W+L+ V + H + + F
Sbjct: 516 HS--GPVYGVSFSPDNKYLL-SCSEDKTVRLWSLDTYTAL-VSYKGHTQPVWDVKFSPLG 571
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
++AS D + ++W D P LR +GH C+ F+ N ++ + D+ R+
Sbjct: 572 HYFVTASHDQTARLWATDHIY--P--LRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRM 627
Query: 341 FSV 343
+ V
Sbjct: 628 WDV 630
Score = 91 (37.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDR-ITDFCFSEDGKWLLSSGMDGSLRIWDV 586
LA+ +D +I ++D+ + R ++ GH + FS DG L+S D S+R+WDV
Sbjct: 658 LASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVLVSGCADNSVRVWDV 715
Score = 76 (31.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 24/74 (32%), Positives = 33/74 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H V +A + S G G I VWD GR LKS R SL + + R +L
Sbjct: 642 HTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLYSLAFSRDGTVL 701
Query: 531 ATVADDLVIRLFDV 544
+ D +R++DV
Sbjct: 702 VSGCADNSVRVWDV 715
Score = 68 (29.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 22/78 (28%), Positives = 37/78 (47%)
Query: 277 FANEPVLMSAS-ADNSIKMWIFDTTDGDPRLLRFRS----------GHSAPPLCIRFYAN 325
F ++ L++A D+ IK+W D L R R GHS P + F +
Sbjct: 469 FNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPD 528
Query: 326 GRHILSAGQDRAFRLFSV 343
+++LS +D+ RL+S+
Sbjct: 529 NKYLLSCSEDKTVRLWSL 546
Score = 43 (20.2 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 142 TCI-MHPDTYLNKVIVGSQEGSLQLWNISTK 171
TCI + D+ L V G Q+ ++LW++ K
Sbjct: 465 TCIEFNDDSTL--VAAGFQDSYIKLWSLDGK 493
>SGD|S000004212 [details] [associations]
symbol:UTP13 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030686 "90S preribosome"
evidence=IDA] [GO:0030515 "snoRNA binding" evidence=IPI]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0032040 "small-subunit processome"
evidence=IEA;IDA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS
of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004212 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945
EMBL:U19027 GO:GO:0032040 GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GO:GO:0034388 HOGENOM:HOG000188765 KO:K14555
GeneTree:ENSGT00690000102183 OrthoDB:EOG4DZ53K PIR:S51445
RefSeq:NP_013323.1 ProteinModelPortal:Q05946 SMR:Q05946
DIP:DIP-4790N IntAct:Q05946 MINT:MINT-501291 STRING:Q05946
PaxDb:Q05946 PeptideAtlas:Q05946 EnsemblFungi:YLR222C GeneID:850919
KEGG:sce:YLR222C CYGD:YLR222c OMA:ADSKLIR NextBio:967338
Genevestigator:Q05946 GermOnline:YLR222C Uniprot:Q05946
Length = 817
Score = 153 (58.9 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 39/171 (22%), Positives = 86/171 (50%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW-EVGCSLVKI 521
+ +SE + +AH ++ ++ +++ +A Y K+W+ + +L++ L +
Sbjct: 480 IKVSEYTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDV 539
Query: 522 VYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSL 581
+ + + LLAT + D ++++ + +++ EGHT+ + F K L+S G DG +
Sbjct: 540 SFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLI 599
Query: 582 RIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRC 630
+IWD + + H + + ALS + D++ +A D +GV+ + C
Sbjct: 600 KIWDCSSGECLKTLDGHNN-RLWALSTMNDGDMIVSA--DADGVFQFWKDC 647
Score = 124 (48.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 60/210 (28%), Positives = 95/210 (45%)
Query: 147 PD-TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKI 205
PD YL V SQ L+++++ T K + K ++AVG +DG I
Sbjct: 71 PDGQYLTYV---SQAQLLKIFHLKTGKVVRSMK-ISSPSYILDADSTSTLLAVGGTDGSI 126
Query: 206 HVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQP---LLASGASSGVISIWNLEKRRL 259
V D E THS +G +++L F LLASG ++G++ +W+L KR+
Sbjct: 127 IV----VDIENGYITHSFKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVKRKC 182
Query: 260 QSVIREAHDNAIISLHFFA----NEPVL--MSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
++E H +A+ L +EP L +S D+ I +W F+ +LL+ +
Sbjct: 183 LHTLQE-HTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINLWDFNMKK-KCKLLKTLPVN 240
Query: 314 SAPPLCIRFYANG---RHILSAGQDRAFRL 340
C F +G R I +AG D F+L
Sbjct: 241 QQVESC-GFLKDGDGKRIIYTAGGDAIFQL 269
Score = 124 (48.7 bits), Expect = 0.00073, P = 0.00073
Identities = 72/351 (20%), Positives = 134/351 (38%)
Query: 13 ITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLV----LVGPQ--LPKKIRALASYR 66
+TSS+ + + +V + K N L ++ L GP+ LP + +
Sbjct: 329 VTSSIAGNHGIIADMRYVGPELNKLALATNSPSLRIIPVPDLSGPEASLPLDVEIYEGHE 388
Query: 67 DYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEEN 126
D N + + +AT S+ + + + + E+ DI +I G
Sbjct: 389 DLL-----NSLDATEDGLWIATASKDNTAI--VWRYNENSCKFDIYAK-YI----GHSAA 436
Query: 127 LAPVGHVKLDDKFTPTCIMHP--DTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXX 184
+ VG + K P ++ D + K I+ S+ + I + Y
Sbjct: 437 VTAVGLPNIVSKGYPEFLLTASNDLTIKKWIIPKPTASMDVQIIKVSE--YTRHAHEKDI 494
Query: 185 XXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGA 244
P + A D + N+ E T + RG + ++F + LLA+ +
Sbjct: 495 NALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRG-LWDVSFCQYDK-LLATSS 552
Query: 245 SSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDP 304
+ IW+L+ + + E H NA+ F + L+S AD IK+W D + G+
Sbjct: 553 GDKTVKIWSLDTFSVMKTL-EGHTNAVQRCSFINKQKQLISCGADGLIKIW--DCSSGE- 608
Query: 305 RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQR 355
L+ GH+ + +G I+SA D F+ + +Q+ E ++
Sbjct: 609 -CLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCTEQEIEEEQEK 658
Score = 79 (32.9 bits), Expect = 6.7e-07, Sum P(2) = 6.7e-07
Identities = 24/114 (21%), Positives = 50/114 (43%)
Query: 482 CDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK--IVYHRVNGLLATVADDLVI 539
C L S+G +K+W + E + V+ ++ L++ AD L I
Sbjct: 542 CQYDKLLATSSG-DKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGL-I 599
Query: 540 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 593
+++D + ++ +GH +R+ DG ++S+ DG + W ++I+
Sbjct: 600 KIWDCSSGECLKTLDGHNNRLWALSTMNDGDMIVSADADGVFQFWKDCTEQEIE 653
Score = 73 (30.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 140 TPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALD----V 195
+P+ I+ D+ + VG +GS+ + +I + FKG G L+ +
Sbjct: 103 SPSYILDADSTSTLLAVGGTDGSIIVVDIENGYITHSFKGHGGTISSLKFYGQLNSKIWL 162
Query: 196 VAVGCSDGKIHVHNVRYDEELVTF---THSMRGAVTALAFSSDGQPL-LASGASSGVISI 251
+A G ++G + V ++ + L T T ++RG +D L L SG +I++
Sbjct: 163 LASGDTNGMVKVWDLVKRKCLHTLQEHTSAVRGLDIIEVPDNDEPSLNLLSGGRDDIINL 222
Query: 252 W--NLEKR 257
W N++K+
Sbjct: 223 WDFNMKKK 230
Score = 69 (29.3 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 550 VRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
V +EGH D + +EDG W+ ++ D + +W
Sbjct: 381 VEIYEGHEDLLNSLDATEDGLWIATASKDNTAIVW 415
Score = 44 (20.5 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 24/111 (21%), Positives = 48/111 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+TAL + DGQ L + + ++ I++L+ ++ ++ + + I+ + +L
Sbjct: 64 ITALKLTPDGQ-YLTYVSQAQLLKIFHLKTGKVVRSMKISSPSYILDAD--STSTLLAVG 120
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA--NGRHILSAGQD 335
D SI + D +G + GH ++FY N + L A D
Sbjct: 121 GTDGSII--VVDIENG--YITHSFKGHGGTISSLKFYGQLNSKIWLLASGD 167
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 142 (55.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 47/204 (23%), Positives = 95/204 (46%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVRYDEEL 216
S++ S+++WN+ ++ LY P ++ V CS+ K I + + + +
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTIKIWDTTNKQCV 179
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
F+ + G +AF+ +G +AS S + IW++ +L + H + + F
Sbjct: 180 NNFSDFV-GFANFVAFNPNGT-CIASAGSDHTVKIWDIRVNKLLQHY-QVHSGGVNCVSF 236
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ L++AS+D ++K I D +G RL+ GH+ P + F G S G D
Sbjct: 237 HPSGNYLITASSDGTLK--ILDLLEG--RLIYTLQGHTGPVFTVSFSKGGELFTSGGADA 292
Query: 337 AFRLFSVIQDQQS-RELSQRHVAK 359
L+ D+ + +++S+R++ +
Sbjct: 293 QVLLWRTNFDELNYKDVSKRNLKR 316
Score = 136 (52.9 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 35/135 (25%), Positives = 75/135 (55%)
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
D L + + A+T++ FS +G+ L A+G+ + +W+L + + ++ H + I
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPNGKQL-ATGSWDTFLMLWSL-RPQARAFRYVGHKDVIT 64
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
S+ F +L SAS D +I++WI D + F++ H+AP + F A+G+ + SA
Sbjct: 65 SVQFSPLGNLLASASRDRTIRLWIPDKRG---KSSEFKA-HTAPVRSVDFSADGQFLASA 120
Query: 333 GQDRAFRLFSVIQDQ 347
+D++ +++++ + +
Sbjct: 121 SEDKSIKVWNMYRQR 135
Score = 135 (52.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 29/106 (27%), Positives = 51/106 (48%)
Query: 480 VACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLV 538
VA + T + SAG +K+WD + L ++V V V +H L T + D
Sbjct: 192 VAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251
Query: 539 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+++ D++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 252 LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
Score = 131 (51.2 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 46/171 (26%), Positives = 73/171 (42%)
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDG 236
FKG P +A G D + + ++R + + +T++ FS G
Sbjct: 14 FKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYV-GHKDVITSVQFSPLG 72
Query: 237 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 296
LLAS + I +W +KR S + AH + S+ F A+ L SAS D SIK+W
Sbjct: 73 N-LLASASRDRTIRLWIPDKRGKSSEFK-AHTAPVRSVDFSADGQFLASASEDKSIKVWN 130
Query: 297 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
R L H+ C +F +GR I+S +D+ +++ Q
Sbjct: 131 MYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 54/248 (21%), Positives = 103/248 (41%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
G+ + + D + +W+ + VGH V +F+P N + S++
Sbjct: 30 GKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFSPLG--------NLLASASRD 81
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV---RYDEELV 217
+++LW + K EFK +A D I V N+ R+ L
Sbjct: 82 RTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLY 141
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
TH +R A FS DG+ L+ S + I IW+ ++ + + A + F
Sbjct: 142 RHTHWVRCA----KFSPDGR-LIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANF-VAFN 195
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRA 337
N + SA +D+++K+W +LL+ HS C+ F+ +G ++++A D
Sbjct: 196 PNGTCIASAGSDHTVKIWDIRVN----KLLQHYQVHSGGVNCVSFHPSGNYLITASSDGT 251
Query: 338 FRLFSVIQ 345
++ +++
Sbjct: 252 LKILDLLE 259
Score = 42 (19.8 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 506
H+G V V+ + +I+A G +K+ D +GR
Sbjct: 227 HSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGR 261
Score = 41 (19.5 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V + GN+ + ++ G ++ +L G R Y + H G V V+
Sbjct: 231 VNCVSFHPSGNYLITASSDGTLKILDLLEG--RLIY------TLQGHTGPVFTVSFSKGG 282
Query: 487 TLMISAGYHGDIKVW 501
L S G + +W
Sbjct: 283 ELFTSGGADAQVLLW 297
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 171 (65.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 49/200 (24%), Positives = 92/200 (46%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PD + + G +G++++W ST K +Y F+G P +A G D I
Sbjct: 186 PDASM--IASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSDDKTIR 243
Query: 207 VHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA 266
+ NV + T V A+AFS G +L SG+ + +W++ R+ + A
Sbjct: 244 LWNVLTGKAHPTPFIGHHNYVYAIAFSPKGN-MLVSGSYDEAVFLWDVRSARVMKSL-PA 301
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC-IRFYAN 325
H + + + + ++ S + D +++W DT+ G + LR PP+ ++F N
Sbjct: 302 HSDPVSGIDVVWDGTLIASCATDGLVRIW--DTSTG--QCLRTLVHEDNPPVSSVKFSPN 357
Query: 326 GRHILSAGQDRAFRLFSVIQ 345
G+++L+ D RL+ ++
Sbjct: 358 GKYVLAWTLDDCVRLWDYVE 377
Score = 125 (49.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 40/162 (24%), Positives = 71/162 (43%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVIS 250
P ++A G +DG + V + + TF + G ++ +++S DG + ASG+ I
Sbjct: 186 PDASMIASGGADGAVKVWAASTGKLIYTFEGHLAG-ISTISWSPDGATI-ASGSDDKTIR 243
Query: 251 IWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFR 310
+WN+ + H N + ++ F +L+S S D ++ +W D R+++
Sbjct: 244 LWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLW--DVRSA--RVMKSL 299
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
HS P I +G I S D R++ Q R L
Sbjct: 300 PAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTL 341
Score = 99 (39.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 51/205 (24%), Positives = 87/205 (42%)
Query: 406 RLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDM 465
RL N + G+ P + V A S GN V G+ + ++++S
Sbjct: 243 RLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSA--------R 294
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYH 524
+S AH+ V G+ TL+ S G +++WD G+ L++ V V
Sbjct: 295 VMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHEDNPPVSSVKF 354
Query: 525 RVNG--LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF--CFSEDGK---------- 570
NG +LA DD V RL+D V R ++ ++GH+++ F G+
Sbjct: 355 SPNGKYVLAWTLDDCV-RLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYA 413
Query: 571 WLLSSGMDGSLRIWDVILARQIDAI 595
+ +S DG++ WDV+ + + I
Sbjct: 414 FAVSGSEDGAILCWDVVTKKVLQRI 438
Score = 98 (39.6 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 29/105 (27%), Positives = 56/105 (53%)
Query: 498 IKVWDF-KGRDLK-----SRWEVGCSLVKIVYH-----RVNGLLATVA--DDLVIRLFDV 544
+++WD+ +GR LK S + S VY R G V+ +D I +DV
Sbjct: 370 VRLWDYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDV 429
Query: 545 VALRMVRKFEGHTDRI--TDFCFSEDGKWLLSSGMDGSLRIWDVI 587
V +++++ E H + D C + +G++++S G+DG++R+W+ +
Sbjct: 430 VTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWEEV 474
Score = 82 (33.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 22/85 (25%), Positives = 40/85 (47%)
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 319
Q + H + ++ F + ++ S AD ++K+W T G +L+ GH A
Sbjct: 168 QKFLLRGHLRGVSAVRFSPDASMIASGGADGAVKVWAAST--G--KLIYTFEGHLAGIST 223
Query: 320 IRFYANGRHILSAGQDRAFRLFSVI 344
I + +G I S D+ RL++V+
Sbjct: 224 ISWSPDGATIASGSDDKTIRLWNVL 248
Score = 67 (28.6 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 472 AHNGEVVGVACDSTNT--LMISAGYHGDIKVWDFKG 505
AH+G V+GV ST M+S G G ++VW+ G
Sbjct: 440 AHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWEEVG 475
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 161 (61.7 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 53/181 (29%), Positives = 81/181 (44%)
Query: 164 QLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSM 223
QLWN + + +G P ++A G ++ I + +D H++
Sbjct: 138 QLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKL----WDSATCGLKHTL 193
Query: 224 RGA---VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
G V L FS DG+ LLASG++ I +W+ L+ + E H N I SL F N
Sbjct: 194 GGHSNWVLPLVFSPDGR-LLASGSNDATIKLWDPPSGSLKHTL-EGHSNKIESLAFSPNG 251
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
+L S S+D +IK+W DT G R GHS L + F + + + S D +L
Sbjct: 252 QLLASGSSDATIKLW--DTATGSFR--HTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKL 307
Query: 341 F 341
+
Sbjct: 308 W 308
Score = 146 (56.5 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 44/158 (27%), Positives = 76/158 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLL 530
H+ V+ VA L+ S IK+WD LK G S ++ +V+ LL
Sbjct: 154 HSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLG-GHSNWVLPLVFSPDGRLL 212
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA- 589
A+ ++D I+L+D + + EGH+++I FS +G+ L S D ++++WD
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGS 272
Query: 590 -RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
R H D+ ++ + SP+ +L + D N + LW
Sbjct: 273 FRHTLKGHSDMVLSVV-FSPDSQLLESGSGD-NTIKLW 308
Score = 124 (48.7 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 31/114 (27%), Positives = 52/114 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H+ V+ + L+ S IK+WD LK E + ++ + NG LLA
Sbjct: 196 HSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLA 255
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ + D I+L+D +GH+D + FS D + L S D ++++WD
Sbjct: 256 SGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
Score = 120 (47.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ + FS DG+ LLASG++ I +W+ L+ + E H +++ S+ F N +L S
Sbjct: 44 IETVTFSPDGR-LLASGSNDTTIKLWDPASGGLKQTL-EGHSSSVQSVAFSPNGQLLASG 101
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 327
S+D +IK+W L GHS + F NG+
Sbjct: 102 SSDTTIKLW----NSASDSLKHTMEGHSDRVESVAFSPNGQ 138
Score = 109 (43.4 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 44/177 (24%), Positives = 78/177 (44%)
Query: 123 IEENLAP-VGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWG 181
+E+N P + ++ + T PD L + GS + +++LW+ ++ +G
Sbjct: 26 VEDNWGPELQTLEGHSDWIETVTFSPDGRL--LASGSNDTTIKLWDPASGGLKQTLEGHS 83
Query: 182 XXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQP 238
P ++A G SD I + N D + H+M G V ++AFS +GQ
Sbjct: 84 SSVQSVAFSPNGQLLASGSSDTTIKLWNSASD----SLKHTMEGHSDRVESVAFSPNGQ- 138
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+WN L+ I E H + ++S+ F + +L S SA+ +IK+W
Sbjct: 139 ------------LWNPAIGSLKHTI-EGHSDWVLSVAFSPDGQLLASGSAEKTIKLW 182
Score = 87 (35.7 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 24/82 (29%), Positives = 39/82 (47%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H + I ++ F + +L S S D +IK+W D G L + GHS+ + F
Sbjct: 38 EGHSDWIETVTFSPDGRLLASGSNDTTIKLW--DPASGG--LKQTLEGHSSSVQSVAFSP 93
Query: 325 NGRHILSAGQDRAFRLFSVIQD 346
NG+ + S D +L++ D
Sbjct: 94 NGQLLASGSSDTTIKLWNSASD 115
Score = 37 (18.1 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 307 LRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
L+ GHS + F +GR + S D +L+
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLW 68
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 152 (58.6 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 47/194 (24%), Positives = 91/194 (46%)
Query: 150 YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHN 209
Y +K+ GS + + +LW+ T K + F+G P VVA G D + +
Sbjct: 146 YGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Query: 210 VRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHD 268
++ EE+VT T + + +L+F + G ++ +G+ + +W+ R++ ++I H
Sbjct: 206 IQSGEEVVTLTGHL-AEIISLSFDTSGDRII-TGSFDHTVVVWDASTGRKVHTLI--GHC 261
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
I S F + ++++ S D + +W D T G + + +GH L F G+
Sbjct: 262 AEISSALFSWDCSLILTGSMDKTCMLW--DATSG--KCVATLTGHDDEILDSCFDYTGKL 317
Query: 329 ILSAGQDRAFRLFS 342
I +A D R+++
Sbjct: 318 IATASADGTARVYN 331
Score = 141 (54.7 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 56/269 (20%), Positives = 113/269 (42%)
Query: 31 TVSVGKAFHIYNCAKLNLVLVGPQLPKKIRALASYRDYTFAAYGNHIAVVKRAHQVATWS 90
+ GK +H + +V + + A S D T + ++ +V T +
Sbjct: 163 SAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSM-DTTAKLWD-----IQSGEEVVTLT 216
Query: 91 RHSAKVNLLLLF---GEHILSIDIDGNMFIW-AFKGIEENLAPVGHVKLDDKFTPTCIMH 146
H A++ + L F G+ I++ D + +W A G + + +GH + +
Sbjct: 217 GHLAEI-ISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL-IGHCAE----ISSALFS 270
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
D L ++ GS + + LW+ ++ K + G ++A +DG
Sbjct: 271 WDCSL--ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTAR 328
Query: 207 VHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA 266
V+N + +T G ++ ++F+ G LL +G+S IW+++ + V+ E
Sbjct: 329 VYNAT-TRKCITKLEGHEGEISKISFNPQGNRLL-TGSSDKTARIWDVQTGQCLQVL-EG 385
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMW 295
H + I S F ++++ S DNS ++W
Sbjct: 386 HTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 132 (51.5 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 37/158 (23%), Positives = 74/158 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVG-CSLVKIVYHRVN-GL 529
H E++ ++ D++ +I+ + + VWD GR + + +G C+ + + L
Sbjct: 218 HLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTL--IGHCAEISSALFSWDCSL 275
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
+ T + D L+D + + V GH D I D CF GK + ++ DG+ R+++
Sbjct: 276 ILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTR 335
Query: 590 RQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ I + + I+ +S +P + L T D+ +W
Sbjct: 336 KCITKLEGHEGEISKISFNPQGNRLLTGSSDKTA-RIW 372
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 50/258 (19%), Positives = 109/258 (42%)
Query: 88 TWSRHSAKVNLLLLFGEH---ILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
T+ H+A++ + L F + + +D +W + EE + GH+
Sbjct: 172 TFRGHTAEI-VCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHL------AEIIS 224
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
+ DT +++I GS + ++ +W+ ST +K++ G ++ G D
Sbjct: 225 LSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKT 284
Query: 205 IHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
+ + + + T T H + F G+ L+A+ ++ G ++N R+ + +
Sbjct: 285 CMLWDATSGKCVATLTGHD--DEILDSCFDYTGK-LIATASADGTARVYNATTRKCITKL 341
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
E H+ I + F L++ S+D + ++W D G + L+ GH+ F
Sbjct: 342 -EGHEGEISKISFNPQGNRLLTGSSDKTARIW--DVQTG--QCLQVLEGHTDEIFSCAFN 396
Query: 324 ANGRHILSAGQDRAFRLF 341
G +++ +D + R++
Sbjct: 397 YKGNIVITGSKDNSCRIW 414
Score = 119 (46.9 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 32/114 (28%), Positives = 55/114 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWE--VGCSLVKIVYHRVNGLL 530
H+ E++ D T L+ +A G +V++ R ++ E G + KI ++ L
Sbjct: 302 HDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEG-EISKISFNPQGNRL 360
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T + D R++DV + ++ EGHTD I F+ G +++ D S RIW
Sbjct: 361 LTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGSKDNSCRIW 414
Score = 111 (44.1 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
L+AT + D R+++ + + K EGH I+ F+ G LL+ D + RIWDV
Sbjct: 317 LIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + + H D I + + + +++ T D N +W
Sbjct: 377 GQCLQVLEGHTD-EIFSCAFNYKGNIVITGSKD-NSCRIW 414
Score = 107 (42.7 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 56/269 (20%), Positives = 115/269 (42%)
Query: 77 IAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLD 136
+ +++ + T SR + +V LL+ + L D N ++ FK + ++ P+ +V L+
Sbjct: 45 VGEIQKVEPLITASR-TKQVRLLVQRLQEKLRQHCDHNFYL--FKVLRAHILPLTNVALN 101
Query: 137 DKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXXXPALDV 195
+C I GS + + ++W+ ++ ++L+ +G P D
Sbjct: 102 K--AGSCF----------ITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFNNPYGDK 149
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIW 252
+A G D + + E H+ RG + L+F+ ++A+G+ +W
Sbjct: 150 IATGSFDKTCKL----WSAETGKCYHTFRGHTAEIVCLSFNPQST-VVATGSMDTTAKLW 204
Query: 253 NLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG 312
+++ + V H IISL F + +++ S D+++ +W D + G R + G
Sbjct: 205 DIQSGE-EVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVW--DASTG--RKVHTLIG 259
Query: 313 HSAPPLCIRFYANGRHILSAGQDRAFRLF 341
H A F + IL+ D+ L+
Sbjct: 260 HCAEISSALFSWDCSLILTGSMDKTCMLW 288
Score = 73 (30.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 29/137 (21%), Positives = 60/137 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV--- 282
+T +A + G + +G+ +W+ L ++ E H N + ++ F N P
Sbjct: 95 LTNVALNKAGSCFI-TGSYDRTCKVWDTASGEELHTL--EGHRNVVYAIAF--NNPYGDK 149
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ + S D + K+W +T FR GH+A +C+ F + + D +L+
Sbjct: 150 IATGSFDKTCKLWSAET---GKCYHTFR-GHTAEIVCLSFNPQSTVVATGSMDTTAKLWD 205
Query: 343 VIQDQQSRELSQRHVAK 359
+ ++ L+ H+A+
Sbjct: 206 IQSGEEVVTLTG-HLAE 221
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 45/204 (22%), Positives = 93/204 (45%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVRYDEEL 216
S++ S+++W++ ++ LY P ++ V CS+ K I + + + +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTIKIWDTTNKQCV 179
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
F+ S+ G + F+ G +AS S + +W++ +L + H + + F
Sbjct: 180 NNFSDSV-GFANFVDFNPSGT-CIASAGSDQTVKVWDVRVNKLLQHY-QVHSGGVNCISF 236
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
++ L++AS+D ++K I D +G RL+ GH+ P + F G S G D
Sbjct: 237 HPSDNYLVTASSDGTLK--ILDLLEG--RLIYTLQGHTGPVFTVSFSKGGELFASGGADT 292
Query: 337 AFRLFSVIQDQ-QSRELSQRHVAK 359
L+ D+ + L++R++ +
Sbjct: 293 QVLLWRTNFDELHCKGLNKRNLKR 316
Score = 134 (52.2 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 33/135 (24%), Positives = 72/135 (53%)
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
D L + + A+T+L S +G+ L A+ + + +WN K ++ H + +
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQL-ATASWDTFLMLWNF-KPHARAYRYVGHKDVVT 64
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
S+ F + +L SAS D ++++WI D + F++ H+AP + F A+G+ + +A
Sbjct: 65 SVQFSPHGNLLASASRDRTVRLWIPDKRG---KFSEFKA-HTAPVRSVDFSADGQFLATA 120
Query: 333 GQDRAFRLFSVIQDQ 347
+D++ +++S+ + +
Sbjct: 121 SEDKSIKVWSMYRQR 135
Score = 130 (50.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 60/261 (22%), Positives = 109/261 (41%)
Query: 92 HSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHP 147
H A + L L G+ + + D + +W FK VGH V +F+P H
Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP----HG 72
Query: 148 DTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHV 207
N + S++ +++LW + K EFK +A D I V
Sbjct: 73 ----NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 208 HNV---RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
++ R+ L TH +R A FS DG+ L+ S + I IW+ ++ +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCA----KFSPDGR-LIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
++ A + F + + SA +D ++K+W D +LL+ HS CI F+
Sbjct: 184 DSVGFANF-VDFNPSGTCIASAGSDQTVKVW--DVRVN--KLLQHYQVHSGGVNCISFHP 238
Query: 325 NGRHILSAGQDRAFRLFSVIQ 345
+ ++++A D ++ +++
Sbjct: 239 SDNYLVTASSDGTLKILDLLE 259
Score = 129 (50.5 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 27/101 (26%), Positives = 50/101 (49%)
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFD 543
+ T + SAG +KVWD + L ++V V + +H + L T + D +++ D
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKILD 256
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 123 (48.4 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
+ VT++ FS G LLAS + + +W +KR S + AH + S+ F A+ L
Sbjct: 60 KDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFK-AHTAPVRSVDFSADGQFL 117
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 ATASEDKSIKVWSMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 344 IQDQ 347
Q
Sbjct: 174 TNKQ 177
Score = 41 (19.5 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 506
H+G V ++ ++ +++A G +K+ D +GR
Sbjct: 227 HSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGR 261
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 138 (53.6 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 61/261 (23%), Positives = 110/261 (42%)
Query: 92 HSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHP 147
H A + L L G+ + + D + +W FK VGH V +F+P H
Sbjct: 17 HKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSP----HG 72
Query: 148 DTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHV 207
N + S++ +++LW + K EFK +A D I V
Sbjct: 73 ----NLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 208 HNV---RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
++ R+ L TH +R A FS DG+ L+ S + I IW+ ++ +
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCA----KFSPDGR-LIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
++ A + F + + SA +D ++K+W D +LL+ HS CI F+
Sbjct: 184 DSVGFANF-VDFNPSGTCIASAGSDQTVKVW--DVRVN--KLLQHYQVHSGGVNCISFHP 238
Query: 325 NGRHILSAGQDRAFRLFSVIQ 345
+G ++++A D ++ +++
Sbjct: 239 SGNYLITASSDGTLKILDLLE 259
Score = 134 (52.2 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 33/135 (24%), Positives = 72/135 (53%)
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
D L + + A+T+L S +G+ L A+ + + +WN K ++ H + +
Sbjct: 7 DPVLERYFKGHKAAITSLDLSPNGKQL-ATASWDTFLMLWNF-KPHARAYRYVGHKDVVT 64
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
S+ F + +L SAS D ++++WI D + F++ H+AP + F A+G+ + +A
Sbjct: 65 SVQFSPHGNLLASASRDRTVRLWIPDKRG---KFSEFKA-HTAPVRSVDFSADGQFLATA 120
Query: 333 GQDRAFRLFSVIQDQ 347
+D++ +++S+ + +
Sbjct: 121 SEDKSIKVWSMYRQR 135
Score = 131 (51.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 45/204 (22%), Positives = 92/204 (45%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVRYDEEL 216
S++ S+++W++ ++ LY P ++ V CS+ K I + + + +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTIKIWDTTNKQCV 179
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
F+ S+ G + F+ G +AS S + +W++ +L + H + + F
Sbjct: 180 NNFSDSV-GFANFVDFNPSGT-CIASAGSDQTVKVWDVRVNKLLQHY-QVHSGGVNCISF 236
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ L++AS+D ++K I D +G RL+ GH+ P + F G S G D
Sbjct: 237 HPSGNYLITASSDGTLK--ILDLLEG--RLIYTLQGHTGPVFTVSFSKGGELFASGGADT 292
Query: 337 AFRLFSVIQDQ-QSRELSQRHVAK 359
L+ D+ + L++R++ +
Sbjct: 293 QVLLWRTNFDELHCKGLTKRNLKR 316
Score = 127 (49.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFD 543
+ T + SAG +KVWD + L ++V V + +H L T + D +++ D
Sbjct: 197 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 256
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 257 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
Score = 123 (48.4 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
+ VT++ FS G LLAS + + +W +KR S + AH + S+ F A+ L
Sbjct: 60 KDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFK-AHTAPVRSVDFSADGQFL 117
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 118 ATASEDKSIKVWSMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 173
Query: 344 IQDQ 347
Q
Sbjct: 174 TNKQ 177
Score = 41 (19.5 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 506
H+G V ++ + +I+A G +K+ D +GR
Sbjct: 227 HSGGVNCISFHPSGNYLITASSDGTLKILDLLEGR 261
Score = 39 (18.8 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 16/75 (21%), Positives = 28/75 (37%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V + GN+ + ++ G ++ +L G R Y + H G V V+
Sbjct: 231 VNCISFHPSGNYLITASSDGTLKILDLLEG--RLIY------TLQGHTGPVFTVSFSKGG 282
Query: 487 TLMISAGYHGDIKVW 501
L S G + +W
Sbjct: 283 ELFASGGADTQVLLW 297
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 154 (59.3 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 43/156 (27%), Positives = 73/156 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H V V + L+ SA +K+WD L+ E V+ +++ + LLA
Sbjct: 378 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 437
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ +DD ++++D + EGH D + FS D + L S+ D ++RIWD
Sbjct: 438 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSH 497
Query: 592 IDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 626
+ S +T++S S + +LA+A DQ V +W
Sbjct: 498 KHTLEGHSSLVTSVSFSHDSRLLASASNDQT-VRIW 532
Score = 145 (56.1 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 39/134 (29%), Positives = 64/134 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H V V + L+ SA +K+WD L+ E V+ +++ + LLA
Sbjct: 420 HRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLA 479
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ +DD +R++D EGH+ +T FS D + L S+ D ++RIWD I AR
Sbjct: 480 SASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWD-IEARS 538
Query: 592 ID-AIHVDVSITAL 604
+ +D +I A+
Sbjct: 539 LQHTFDLDATIEAM 552
Score = 145 (56.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 42/158 (26%), Positives = 77/158 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H V+ V+ + L+ SA +K+WD + L+ E LV+ +++ + LLA
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---IL 588
+ A D ++++D + EGH D + FS D + L S+ D +++IWD L
Sbjct: 355 S-ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 413
Query: 589 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
++ H D + ++ S + +LA+A D + V +W
Sbjct: 414 QHTLEG-HRDW-VRSVIFSHDSQLLASAS-DDSTVKIW 448
Score = 144 (55.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 43/195 (22%), Positives = 88/195 (45%)
Query: 152 NKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR 211
++++ + + ++++W+ T + +G ++A D + +
Sbjct: 350 SRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKI---- 405
Query: 212 YDEELVTFTHSMRGA---VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
+D + H++ G V ++ FS D Q LLAS + + IW+ LQ + E H
Sbjct: 406 WDTGTGSLQHTLEGHRDWVRSVIFSHDSQ-LLASASDDSTVKIWDTGTGSLQHTL-EGHR 463
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
+ + S+ F + +L SAS D ++++W DT G + GHS+ + F + R
Sbjct: 464 DWVRSVIFSHDSRLLASASDDRTVRIW--DTEKGSHK--HTLEGHSSLVTSVSFSHDSRL 519
Query: 329 ILSAGQDRAFRLFSV 343
+ SA D+ R++ +
Sbjct: 520 LASASNDQTVRIWDI 534
Score = 131 (51.2 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 41/158 (25%), Positives = 75/158 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLA 531
H+ V V + L+ SA +K+WD L+ E V+ +++ + LLA
Sbjct: 337 HSDLVRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLA 395
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---IL 588
+ +DD ++++D + EGH D + FS D + L S+ D +++IWD L
Sbjct: 396 SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 455
Query: 589 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
++ H D + ++ S + +LA+A D+ V +W
Sbjct: 456 QHTLEG-HRDW-VRSVIFSHDSRLLASASDDRT-VRIW 490
Score = 116 (45.9 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 39/133 (29%), Positives = 65/133 (48%)
Query: 212 YDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
+D E + H++ G V ++ FS D + LLAS AS + IW+ LQ + E H
Sbjct: 323 WDTETGSLQHTLEGHSDLVRSVIFSHDSR-LLAS-ASDSTVKIWDTGTGSLQHTL-EGHR 379
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
+ + S+ F + +L SAS D+++K+W DT G L GH + F + +
Sbjct: 380 DWVRSVIFSHDSQLLASASDDSTVKIW--DTGTGS--LQHTLEGHRDWVRSVIFSHDSQL 435
Query: 329 ILSAGQDRAFRLF 341
+ SA D +++
Sbjct: 436 LASASDDSTVKIW 448
Score = 113 (44.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 31/116 (26%), Positives = 62/116 (53%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
AV ++++S D + LLAS + + IW+ E LQ + E H + + S+ F+++ L++
Sbjct: 298 AVLSVSYSHDSR-LLASASDDRTVKIWDTETGSLQHTL-EGHSDLVRSV-IFSHDSRLLA 354
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
+++D+++K+W DT G L GH + F + + + SA D +++
Sbjct: 355 SASDSTVKIW--DTGTGS--LQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Score = 80 (33.2 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H+ A++S+ + + +L SAS D ++K+W DT G L GHS + F
Sbjct: 293 EGHEAAVLSVSYSHDSRLLASASDDRTVKIW--DTETGS--LQHTLEGHSDLVRSVIFSH 348
Query: 325 NGRHILSAGQDRAFRLF 341
+ R +L++ D +++
Sbjct: 349 DSR-LLASASDSTVKIW 364
Score = 63 (27.2 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 14/68 (20%), Positives = 31/68 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H+ V V+ + L+ SA +++WD + R L+ +++ ++ + + + L
Sbjct: 504 HSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARSLQHTFDLDATIEAMRFDKATSLWIQ 563
Query: 533 VADDLVIR 540
V IR
Sbjct: 564 VTVKASIR 571
Score = 47 (21.6 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 307 LRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
L+ GH A L + + + R + SA DR +++
Sbjct: 289 LQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIW 323
Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 626 WVNRCMFSGDSNIDSYASGKEIVSV 650
WV +FS DS + + AS V +
Sbjct: 465 WVRSVIFSHDSRLLASASDDRTVRI 489
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 54/210 (25%), Positives = 96/210 (45%)
Query: 153 KVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVR 211
+++ S + S+++W + KK LY P ++A C D + + + +
Sbjct: 116 RLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIA-SCGDDRTVRLWDTS 174
Query: 212 YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAI 271
+ + FT G+ T + F+S G + +SGA + I IW++ +L + H+ +
Sbjct: 175 SHQCINIFT-DYGGSATFVDFNSSGTCIASSGADN-TIKIWDIRTNKLIQHYK-VHNAGV 231
Query: 272 ISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILS 331
F + L+S S+D++IK I D +G RL+ GH P L + F +G S
Sbjct: 232 NCFSFHPSGNYLISGSSDSTIK--ILDLLEG--RLIYTLHGHKGPVLTVTFSRDGDLFAS 287
Query: 332 AGQDRAFRLFSVIQDQQS-RELSQRHVAKR 360
G D ++ D + REL +H +KR
Sbjct: 288 GGADSQVLMWKTNFDSLNYRELLSKH-SKR 316
Score = 150 (57.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 45/195 (23%), Positives = 89/195 (45%)
Query: 152 NKVIV-GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV 210
NK + GS + SL +WN++ K + + F G P+ +VA D + +
Sbjct: 30 NKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTVRLWTP 89
Query: 211 RYDEELVTF-THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHD 268
E F H+ +V ++ FS DGQ L+ + V +W +E+++ L S+ R H
Sbjct: 90 SIKGESTVFKAHT--ASVRSVHFSRDGQRLVTASDDKSV-KVWGVERKKFLYSLNR--HT 144
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
N + F + ++ S D ++++W DT+ + + + + + F ++G
Sbjct: 145 NWVRCARFSPDGRLIASCGDDRTVRLW--DTSSH--QCINIFTDYGGSATFVDFNSSGTC 200
Query: 329 ILSAGQDRAFRLFSV 343
I S+G D +++ +
Sbjct: 201 IASSGADNTIKIWDI 215
Score = 139 (54.0 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 45/172 (26%), Positives = 75/172 (43%)
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSD 235
FKG P +A G D + + N+ F H+ +T + F+
Sbjct: 14 FKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHT--DVITGVNFAPS 71
Query: 236 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
G L+AS + + +W + +S + +AH ++ S+HF + L++AS D S+K+W
Sbjct: 72 GS-LVASSSRDQTVRLWTPSIKG-ESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 296 IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
+ + L + H+ C RF +GR I S G DR RL+ Q
Sbjct: 130 GVERK----KFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQ 177
Score = 127 (49.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 49/234 (20%), Positives = 92/234 (39%)
Query: 112 DGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTK 171
D ++ IW VGH D T P L V S++ +++LW S K
Sbjct: 39 DKSLMIWNLAPKARAFRFVGHT---DVITGVNFA-PSGSL--VASSSRDQTVRLWTPSIK 92
Query: 172 KKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA 231
+ FK + D + V V + L + V
Sbjct: 93 GESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNW-VRCAR 151
Query: 232 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNS 291
FS DG+ L+AS + +W+ + ++ + +A + F ++ + S+ ADN+
Sbjct: 152 FSPDGR-LIASCGDDRTVRLWDTSSHQCINIFTDYGGSATF-VDFNSSGTCIASSGADNT 209
Query: 292 IKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
IK+W T +L++ H+A C F+ +G +++S D ++ +++
Sbjct: 210 IKIWDIRTN----KLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE 259
Score = 117 (46.2 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 29/141 (20%), Positives = 67/141 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRW-EVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L+ S G +++WD + + + G S + ++ +A+ D I+++D+
Sbjct: 158 LIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRT 217
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
++++ ++ H + F F G +L+S D +++I D++ R I +H + ++
Sbjct: 218 NKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVT 277
Query: 606 LSPNMDVLATAHVDQNGVYLW 626
S + D+ A+ D V +W
Sbjct: 278 FSRDGDLFASGGADSQ-VLMW 297
Score = 45 (20.9 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 16/66 (24%), Positives = 27/66 (40%)
Query: 436 GNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYH 495
GN+ + G++ I+ +L G R Y + + H G V+ V L S G
Sbjct: 240 GNYLISGSSDSTIKILDLLEG--RLIY------TLHGHKGPVLTVTFSRDGDLFASGGAD 291
Query: 496 GDIKVW 501
+ +W
Sbjct: 292 SQVLMW 297
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 133 (51.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/206 (21%), Positives = 90/206 (43%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ S + +L+LW++ T + G P +++ G D + + +V
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Query: 214 EEL-VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ L V HS VTA+ F+ DG L+ S + G+ IW+ + + + +
Sbjct: 146 KCLKVLPAHS--DPVTAVDFNRDGS-LIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVS 202
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR--F-YANGRHI 329
+ F N ++ + DN++++W + + L+ +GH CI F NG+ I
Sbjct: 203 FVRFSPNGKFILVGTLDNTLRLWNISSA----KFLKTYTGHVNAQYCISSAFSVTNGKRI 258
Query: 330 LSAGQDRAFRLFSVIQDQQSRELSQR 355
+S +D ++ + S++L Q+
Sbjct: 259 VSGSEDNCVHMWEL----NSKKLLQK 280
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 37/157 (23%), Positives = 73/157 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 531
H + VA S ++SA +K+WD + G +K+ + ++ + ++
Sbjct: 70 HENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIV 129
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D +R++DV + ++ H+D +T F+ DG ++SS DG RIWD
Sbjct: 130 SGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHC 189
Query: 592 IDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLW 626
+ + D + ++ + SPN + +D N + LW
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLD-NTLRLW 225
Score = 128 (50.1 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 38/130 (29%), Positives = 65/130 (50%)
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR--LQSVIRE--AHDNAIIS 273
T T R AV+++ FSSDG+ LLAS ++ I + + + ++E H+N I
Sbjct: 19 TLTSHNR-AVSSVKFSSDGR-LLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISD 76
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
+ F ++ ++SAS D ++K+W D G L++ GH+ C+ F I+S
Sbjct: 77 VAFSSDARFIVSASDDKTLKLW--DVETGS--LIKTLIGHTNYAFCVNFNPQSNMIVSGS 132
Query: 334 QDRAFRLFSV 343
D R++ V
Sbjct: 133 FDETVRIWDV 142
Score = 122 (48.0 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 35/167 (20%), Positives = 80/167 (47%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLL 530
AH+ V V + +L++S+ Y G ++WD G +K+ + V V NG
Sbjct: 153 AHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKF 212
Query: 531 ATVAD-DLVIRLFDVVALRMVRKFEGHTDRITDFCFSE-----DGKWLLSSGMDGSLRIW 584
V D +RL+++ + + ++ + GH + +C S +GK ++S D + +W
Sbjct: 213 ILVGTLDNTLRLWNISSAKFLKTYTGHVN--AQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Query: 585 DVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNR 629
++ + + + H + ++ ++ P +++A+ +D+ V +W +
Sbjct: 271 ELNSKKLLQKLEGHTE-TVMNVACHPTENLIASGSLDKT-VRIWTQK 315
Score = 62 (26.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 26/123 (21%), Positives = 50/123 (40%)
Query: 422 ENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVA 481
ENP V S G F ++GT + +N+ S +Y + + + + A
Sbjct: 197 ENPP-VSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTY------TGHVNAQYCISSA 249
Query: 482 CDSTNTLMISAGYHGD-IKVWDFKGRDLKSRWEVGCSLV-KIVYHRVNGLLATVADDLVI 539
TN I +G + + +W+ + L + E V + H L+A+ + D +
Sbjct: 250 FSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTV 309
Query: 540 RLF 542
R++
Sbjct: 310 RIW 312
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 171 (65.3 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 56/185 (30%), Positives = 93/185 (50%)
Query: 484 STNTLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIR 540
S +L ++G H ++W F R R G + + +H + LAT + D +R
Sbjct: 411 SPYSLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 469
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHV 597
L+ VR F GH + FS +GK+L S+G D L++WD+ L +++ H
Sbjct: 470 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HT 528
Query: 598 DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSS 657
D +IT+L+ SP+ ++A+A +D N V +W R + + D +SG E+V V +S+
Sbjct: 529 D-NITSLTFSPDSSLIASASMD-NSVRVWDIRNTYCS-TPADG-SSG-ELVGVYTGQMSN 583
Query: 658 VEGCQ 662
V Q
Sbjct: 584 VLSVQ 588
Score = 147 (56.8 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + + +LW+ L + G P + +A G +D + + + + +
Sbjct: 420 GSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 479
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
FT RG V +LAFS +G+ LAS + +W+L L +R DN I SL F
Sbjct: 480 RLFT-GHRGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDN-ITSLTF 536
Query: 277 FANEPVLMSASADNSIKMWIFDTT------DGDP-RLLRFRSGHSAPPLCIRFYA 324
+ ++ SAS DNS+++W T DG L+ +G + L ++F A
Sbjct: 537 SPDSSLIASASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMA 591
Score = 113 (44.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V + F +D LL+ I W+L +V+ + H + L
Sbjct: 361 GPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFT-NTVLYQGHAYPVWDLDISPYSLYFA 418
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 344
S S D + ++W FD T P LR +GH A C++F+ N ++ + D+ RL+S
Sbjct: 419 SGSHDRTARLWSFDRTY--P--LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 474
Query: 345 QDQQSR 350
Q R
Sbjct: 475 QGNSVR 480
Score = 92 (37.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 584
+GLL+ ++D+ IR +D+ + ++GH + D S + S D + R+W
Sbjct: 373 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSF 431
Query: 585 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 432 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 471
Score = 85 (35.0 bits), Expect = 6.5e-13, Sum P(2) = 6.5e-13
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
S LLA+G + I +W+L ++L+S E H + +H + ++ D
Sbjct: 295 SPDSKLLAAGFDNSCIKLWSLRSKKLKS---EPHQVDVSRIHLACD---ILEEEDDED-- 346
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
D + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 347 ----DNAGTEMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 389
Score = 66 (28.3 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 322
I H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 355 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDLDI 410
Query: 323 YANGRHILSAGQDRAFRLFS 342
+ S DR RL+S
Sbjct: 411 SPYSLYFASGSHDRTARLWS 430
Score = 64 (27.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 531
H G V+ +A + SAG +K+WD L ++ + + + L+A
Sbjct: 485 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 544
Query: 532 TVADDLVIRLFDV 544
+ + D +R++D+
Sbjct: 545 SASMDNSVRVWDI 557
Score = 41 (19.5 bits), Expect = 9.9e-11, Sum P(3) = 9.9e-11
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKK 172
T + PD+ L + G ++LW++ +KK
Sbjct: 291 TAEISPDSKL--LAAGFDNSCIKLWSLRSKK 319
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 170 (64.9 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 55/185 (29%), Positives = 91/185 (49%)
Query: 484 STNTLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIR 540
S +L ++G H ++W F R R G + + +H + LAT + D +R
Sbjct: 393 SPYSLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHV 597
L+ VR F GH + FS +GK+L S+G D L++WD+ L +++ H
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HT 510
Query: 598 DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSS 657
D +IT+L+ SP+ ++A+A +D N V +W R + + D S E+V V +S+
Sbjct: 511 D-NITSLTFSPDSGLIASASMD-NSVRVWDIRNTYCS-APADG--SSSELVGVYTGQMSN 565
Query: 658 VEGCQ 662
V Q
Sbjct: 566 VLSVQ 570
Score = 146 (56.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 48/175 (27%), Positives = 79/175 (45%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + + +LW+ L + G P + +A G +D + + + + +
Sbjct: 402 GSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
FT RG V +LAFS +G+ LAS + +W+L L +R DN I SL F
Sbjct: 462 RLFT-GHRGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDN-ITSLTF 518
Query: 277 FANEPVLMSASADNSIKMWIFDTT------DGDP-RLLRFRSGHSAPPLCIRFYA 324
+ ++ SAS DNS+++W T DG L+ +G + L ++F A
Sbjct: 519 SPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQMSNVLSVQFMA 573
Score = 113 (44.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 34/126 (26%), Positives = 54/126 (42%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V + F +D LL+ I W+L +V+ + H + L
Sbjct: 343 GPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFT-NTVLYQGHAYPVWDLDISPYSLYFA 400
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 344
S S D + ++W FD T P LR +GH A C++F+ N ++ + D+ RL+S
Sbjct: 401 SGSHDRTARLWSFDRTY--P--LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
Query: 345 QDQQSR 350
Q R
Sbjct: 457 QGNSVR 462
Score = 92 (37.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 584
+GLL+ ++D+ IR +D+ + ++GH + D S + S D + R+W
Sbjct: 355 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSF 413
Query: 585 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 414 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 453
Score = 85 (35.0 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
S LLA+G + I +W+L ++L+S E H + +H + ++ D
Sbjct: 277 SPDSKLLAAGFDNSCIKLWSLRSKKLKS---EPHQVDVSRIHLACD---ILEEEDDED-- 328
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
D + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 329 ----DNAGTEMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
Score = 70 (29.7 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 17/73 (23%), Positives = 34/73 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 531
H G V+ +A + SAG +K+WD L ++ + + +GL+A
Sbjct: 467 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIA 526
Query: 532 TVADDLVIRLFDV 544
+ + D +R++D+
Sbjct: 527 SASMDNSVRVWDI 539
Score = 66 (28.3 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 322
I H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDLDI 392
Query: 323 YANGRHILSAGQDRAFRLFS 342
+ S DR RL+S
Sbjct: 393 SPYSLYFASGSHDRTARLWS 412
Score = 41 (19.5 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKK 172
T + PD+ L + G ++LW++ +KK
Sbjct: 273 TAEISPDSKL--LAAGFDNSCIKLWSLRSKK 301
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 172 (65.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 53/177 (29%), Positives = 87/177 (49%)
Query: 491 SAGYHGDIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIRLFDVVALR 548
SA + ++W F R R G + + +H + LAT + D +RL+
Sbjct: 397 SASHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 455
Query: 549 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSITALS 605
VR F GH + FS +GK+L S+G D L++WD+ L +++ H D +IT+L+
Sbjct: 456 SVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HTD-NITSLT 513
Query: 606 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQ 662
SP+ ++A+A +D N V +W R S + + S E+V V +S+V Q
Sbjct: 514 FSPDSSLVASASMD-NSVRVWDIR---SSHCSTPADGSSSELVGVYTGQMSNVLSVQ 566
Score = 138 (53.6 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 39/138 (28%), Positives = 65/138 (47%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + + +LW+ L + G P + +A G +D + + + + +
Sbjct: 399 SHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVR 458
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
FT RG V +LAFS +G+ LAS + +W+L L +R DN I SL F
Sbjct: 459 LFT-GHRGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDN-ITSLTFS 515
Query: 278 ANEPVLMSASADNSIKMW 295
+ ++ SAS DNS+++W
Sbjct: 516 PDSSLVASASMDNSVRVW 533
Score = 121 (47.7 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 39/141 (27%), Positives = 62/141 (43%)
Query: 213 DEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDN 269
D+ L T +RG V + F +D LL+ I W+L +V+ + H
Sbjct: 324 DDNLGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMS-IRYWDLGSFT-NTVLYQGHAY 381
Query: 270 AIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHI 329
+ L + SAS D + ++W FD T P LR +GH A C++F+ N ++
Sbjct: 382 PVWDLDISPHSLYFASASHDRTARLWSFDRTY--P--LRIYAGHLADVDCVKFHPNSNYL 437
Query: 330 LSAGQDRAFRLFSVIQDQQSR 350
+ D+ RL+S Q R
Sbjct: 438 ATGSTDKTVRLWSTQQGNSVR 458
Score = 95 (38.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 584
+GLL+ ++D+ IR +D+ + ++GH + D S + S+ D + R+W
Sbjct: 351 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASASHDRTARLWSF 409
Query: 585 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 410 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 449
Score = 81 (33.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 27/110 (24%), Positives = 47/110 (42%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
S LLA+G + I +W+L ++L+S E H + +H + + D
Sbjct: 273 SPDSKLLAAGFDNSCIKLWSLRSKKLKS---EPHQVDVSRIHLACD---FLEEEDDED-- 324
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
D + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 325 ----DNLGTEMKVLR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 367
Score = 63 (27.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 531
H G V+ +A + SAG +K+WD L ++ + + + L+A
Sbjct: 463 HRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVA 522
Query: 532 TVADDLVIRLFDV 544
+ + D +R++D+
Sbjct: 523 SASMDNSVRVWDI 535
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKK 172
T + PD+ L + G ++LW++ +KK
Sbjct: 269 TAEVSPDSKL--LAAGFDNSCIKLWSLRSKK 297
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 174 (66.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 55/181 (30%), Positives = 87/181 (48%)
Query: 487 TLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIRLFD 543
+L ++G H ++W F R R G + + +H + LAT + D +RL+
Sbjct: 396 SLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWS 454
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSI 601
VR F GH + FS +GK+L S+G D L++WD+ + H D SI
Sbjct: 455 AQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD-SI 513
Query: 602 TALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGC 661
T+L+ SP+ ++A+A +D N V +W R S N + S E+V V +S+V
Sbjct: 514 TSLAFSPDSGLIASASMD-NSVRVWDIR---STCCNTPADGSSGELVGVYTGQMSNVLSV 569
Query: 662 Q 662
Q
Sbjct: 570 Q 570
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + + +LW+ L + G P + +A G +D + + + + +
Sbjct: 402 GSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
FT RG V +L+FS +G+ LAS + +W+L L +R H ++I SL F
Sbjct: 462 RLFT-GHRGPVLSLSFSPNGK-YLASAGEDQRLKLWDLASGTLFKELR-GHTDSITSLAF 518
Query: 277 FANEPVLMSASADNSIKMWIFDTT------DGDP-RLLRFRSGHSAPPLCIRFYA 324
+ ++ SAS DNS+++W +T DG L+ +G + L ++F A
Sbjct: 519 SPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMA 573
Score = 91 (37.1 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 28/102 (27%), Positives = 48/102 (47%)
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 584
+GLL+ ++D+ IR +D+ + ++GH + D S + S D + R+W
Sbjct: 355 SGLLSC-SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSF 413
Query: 585 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
D +I A H+ + + PN + LAT D+ V LW
Sbjct: 414 DRTYPLRIYAGHL-ADVDCVKFHPNSNYLATGSTDKT-VRLW 453
Score = 79 (32.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/113 (29%), Positives = 52/113 (46%)
Query: 233 SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH--DNAIISLHFFANEPVLMSASADN 290
SSD + LLA+G + I +W+L ++L+S E H D + I L E +N
Sbjct: 277 SSDSK-LLAAGFDNSCIKLWSLRSKKLKS---EPHHVDTSRIRLACDTLE------EEEN 326
Query: 291 SIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
D T + ++LR GH P RF A+ +LS +D + R + +
Sbjct: 327 EE-----DNTGTEMKILR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
Score = 66 (28.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 23/80 (28%), Positives = 32/80 (40%)
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 322
I H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDVDI 392
Query: 323 YANGRHILSAGQDRAFRLFS 342
+ S DR RL+S
Sbjct: 393 SPFSLYFASGSHDRTARLWS 412
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 126 (49.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 45/157 (28%), Positives = 74/157 (47%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVI 249
P +A G D + ++ E FT R V ++++S DG+ L ASG +G I
Sbjct: 75 PTGKYLASGSGDTTVRFWDL--STETPHFTCQGHRHWVLSISWSPDGKTL-ASGCKNGQI 131
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV--LMSASADNSIKMWIFDTTDGDP 304
+W+ + + H I L + AN + S+S D S+++W DTT G
Sbjct: 132 LLWDPSTGKQVGRVLAGHSKWITGLSWEPLHANPECRYMASSSKDGSVRVW--DTTAG-- 187
Query: 305 RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 188 RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 223
Score = 125 (49.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 322 HQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 380
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 381 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 107 (42.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 39/163 (23%), Positives = 74/163 (45%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + +++ W++ST+ + +G P +A GC +G+I + + +++
Sbjct: 83 GSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLASGCKNGQILLWDPSTGKQV 142
Query: 217 --VTFTHSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNA 270
V HS +T L++ P +AS + G + +W+ R + ++ H +
Sbjct: 143 GRVLAGHSKW--ITGLSWEPLHANPECRYMASSSKDGSVRVWDTTAGRCERILT-GHTQS 199
Query: 271 IISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
+ L + + +L SAS D +IK+W DG L R GH
Sbjct: 200 VTCLRW-GGDGLLYSASQDRTIKVW--RAHDGV--LCRTLQGH 237
Score = 92 (37.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 520 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 328 QVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 387
Query: 580 SLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 620
+L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 388 TLKVWDVKAQKLAADLPG-HAD-EVYAVDWSPDGQRVASGGKDK 429
Score = 69 (29.3 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 20/100 (20%), Positives = 47/100 (47%)
Query: 530 LATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
L + +DD + ++ + + + GH I FS D + + S+ D S+++WD
Sbjct: 295 LVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 354
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + ++ HV ++ ++ S + +L + D + +W
Sbjct: 355 GKYLASLRGHV-AAVYQIAWSADSRLLVSGSSDST-LKVW 392
Score = 64 (27.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 62 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--QGHRHWVLSISWSP 117
Query: 325 NGRHILS 331
+G+ + S
Sbjct: 118 DGKTLAS 124
Score = 60 (26.2 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 27/128 (21%), Positives = 53/128 (41%)
Query: 240 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW---- 295
+AS + G + +W+ R + ++ H ++ L + + +L SAS D +IK+W
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILT-GHTQSVTCLRW-GGDGLLYSASQDRTIKVWRAHD 227
Query: 296 --IFDTTDGDPRLLR---------FRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 344
+ T G + R+G P + + L +DRA R ++++
Sbjct: 228 GVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLV 287
Query: 345 QDQQSREL 352
+ Q L
Sbjct: 288 RGQGPERL 295
Score = 44 (20.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
GHS + + F G+++ S D R + +
Sbjct: 63 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 94
Score = 39 (18.8 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 21/80 (26%), Positives = 37/80 (46%)
Query: 566 SEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGV 623
++D + L D +LR ++++ + + + V S T SP D A + G
Sbjct: 266 AQDLQGSLQELKDRALRRYNLVRGQGPERL-VSGSDDFTLFMWSPAEDKKPLARM--TGH 322
Query: 624 YLWVNRCMFSGDSNIDSYAS 643
+N+ +FS DS I + AS
Sbjct: 323 QALINQVLFSPDSRIIASAS 342
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 169 (64.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 59/244 (24%), Positives = 106/244 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D ++N++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
+W D +G R F +GH + I F+ NG + D RLF + DQ+ S
Sbjct: 210 LW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 354 QRHV 357
++
Sbjct: 266 HDNI 269
Score = 137 (53.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW++ F G P + A G D
Sbjct: 194 PDTRL--FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+T++H ++ +T+++FS G+ LLA G ++W+ K V+
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GYDDFNCNVWDALKADRAGVLA- 309
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 74 (31.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 169 (64.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 59/244 (24%), Positives = 106/244 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D ++N++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
+W D +G R F +GH + I F+ NG + D RLF + DQ+ S
Sbjct: 210 LW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 354 QRHV 357
++
Sbjct: 266 HDNI 269
Score = 137 (53.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW++ F G P + A G D
Sbjct: 194 PDTRL--FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+T++H ++ +T+++FS G+ LLA G ++W+ K V+
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GYDDFNCNVWDALKADRAGVLA- 309
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 74 (31.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 169 (64.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 59/244 (24%), Positives = 106/244 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D ++N++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
+W D +G R F +GH + I F+ NG + D RLF + DQ+ S
Sbjct: 210 LW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 354 QRHV 357
++
Sbjct: 266 HDNI 269
Score = 137 (53.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW++ F G P + A G D
Sbjct: 194 PDTRL--FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+T++H ++ +T+++FS G+ LLA G ++W+ K V+
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GYDDFNCNVWDALKADRAGVLA- 309
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 74 (31.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 169 (64.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 59/244 (24%), Positives = 106/244 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D ++N++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
+W D +G R F +GH + I F+ NG + D RLF + DQ+ S
Sbjct: 210 LW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 354 QRHV 357
++
Sbjct: 266 HDNI 269
Score = 137 (53.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW++ F G P + A G D
Sbjct: 194 PDTRL--FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+T++H ++ +T+++FS G+ LLA G ++W+ K V+
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GYDDFNCNVWDALKADRAGVLA- 309
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 74 (31.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 169 (64.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 59/244 (24%), Positives = 106/244 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D ++N++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
+W D +G R F +GH + I F+ NG + D RLF + DQ+ S
Sbjct: 210 LW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
Query: 354 QRHV 357
++
Sbjct: 266 HDNI 269
Score = 137 (53.3 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW++ F G P + A G D
Sbjct: 194 PDTRL--FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+T++H ++ +T+++FS G+ LLA G ++W+ K V+
Sbjct: 252 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GYDDFNCNVWDALKADRAGVLA- 309
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 74 (31.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 167 (63.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 58/235 (24%), Positives = 103/235 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D ++N++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D +G R F +GH + I F+ NG + D RLF + DQ+
Sbjct: 210 LW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/150 (26%), Positives = 70/150 (46%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW++ F G P + A G D
Sbjct: 194 PDTRL--FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+ ++H ++ +T++AFS G+ LLA G ++W+ K V+
Sbjct: 252 LFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLA-GYDDFNCNVWDALKADRAGVLA- 309
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 76 (31.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 131 (51.2 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 45/204 (22%), Positives = 92/204 (45%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVRYDEEL 216
S++ S+++W++ ++ LY P ++ V CS+ K I + + + +
Sbjct: 79 SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTIKIWDTTNKQCV 137
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
F+ S+ G + F+ G +AS S + +W++ +L + H + + F
Sbjct: 138 NNFSDSV-GFANFVDFNPSGT-CIASAGSDQTVKVWDVRVNKLLQHY-QVHSGGVNCISF 194
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ L++AS+D ++K I D +G RL+ GH+ P + F G S G D
Sbjct: 195 HPSGNYLITASSDGTLK--ILDLLEG--RLIYTLQGHTGPVFTVSFSKGGELFASGGADT 250
Query: 337 AFRLFSVIQDQ-QSRELSQRHVAK 359
L+ D+ + L++R++ +
Sbjct: 251 QVLLWRTNFDELHCKGLTKRNLKR 274
Score = 127 (49.8 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFD 543
+ T + SAG +KVWD + L ++V V + +H L T + D +++ D
Sbjct: 155 SGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILD 214
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
++ R++ +GHT + FS+ G+ S G D + +W
Sbjct: 215 LLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 55/234 (23%), Positives = 99/234 (42%)
Query: 117 IWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKL 174
+W FK VGH V +F+P H N + S++ +++LW + K
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSP----HG----NLLASASRDRTVRLWIPDKRGKF 53
Query: 175 YEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV---RYDEELVTFTHSMRGAVTALA 231
EFK +A D I V ++ R+ L TH +R A
Sbjct: 54 SEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCA----K 109
Query: 232 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNS 291
FS DG+ L+ S + I IW+ ++ + ++ A + F + + SA +D +
Sbjct: 110 FSPDGR-LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF-VDFNPSGTCIASAGSDQT 167
Query: 292 IKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
+K+W D +LL+ HS CI F+ +G ++++A D ++ +++
Sbjct: 168 VKVW--DVRVN--KLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLE 217
Score = 123 (48.4 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
+ VT++ FS G LLAS + + +W +KR S + AH + S+ F A+ L
Sbjct: 18 KDVVTSVQFSPHGN-LLASASRDRTVRLWIPDKRGKFSEFK-AHTAPVRSVDFSADGQFL 75
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+AS D SIK+W R L H+ C +F +GR I+S +D+ +++
Sbjct: 76 ATASEDKSIKVWSMYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDT 131
Query: 344 IQDQ 347
Q
Sbjct: 132 TNKQ 135
Score = 109 (43.4 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 24/97 (24%), Positives = 54/97 (55%)
Query: 251 IWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFR 310
+WN K ++ H + + S+ F + +L SAS D ++++WI D + F+
Sbjct: 2 LWNF-KPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRG---KFSEFK 57
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
+ H+AP + F A+G+ + +A +D++ +++S+ + +
Sbjct: 58 A-HTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQR 93
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 56/248 (22%), Positives = 103/248 (41%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
G+ + + D + +W K VGH V +F+P N + S++
Sbjct: 30 GKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLG--------NLLASASRD 81
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV---RYDEELV 217
+++LW + K EFK +A D I V N+ R+ L
Sbjct: 82 RTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLY 141
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
TH +R A FS DG+ L+ S + I IW+ ++ + ++ A + F
Sbjct: 142 RHTHWVRCA----KFSPDGR-LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANF-VDFN 195
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRA 337
N + SA +D+++K+W +LL+ HS C+ F+ +G +I++A D
Sbjct: 196 PNGTCIASAGSDHTVKIWDIRVN----KLLQHYQVHSGGVNCVSFHPSGNYIITASSDGT 251
Query: 338 FRLFSVIQ 345
++ +++
Sbjct: 252 LKILDLLE 259
Score = 131 (51.2 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 45/204 (22%), Positives = 93/204 (45%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK-IHVHNVRYDEEL 216
S++ S+++WN+ ++ LY P ++ V CS+ K I + + + +
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLI-VSCSEDKTIKIWDTTNKQCV 179
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
F+ S+ G + F+ +G +AS S + IW++ +L + H + + F
Sbjct: 180 NNFSDSV-GFANFVDFNPNGT-CIASAGSDHTVKIWDIRVNKLLQHY-QVHSGGVNCVSF 236
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ +++AS+D ++K I D +G RL+ GH+ P + F G S G D
Sbjct: 237 HPSGNYIITASSDGTLK--ILDLLEG--RLIYTLQGHTGPVFTVSFSKGGELFSSGGADT 292
Query: 337 AFRLFSVIQDQQS-RELSQRHVAK 359
L+ D + +++ +R++ +
Sbjct: 293 QVLLWRTNFDYLNCKDMIKRNLKR 316
Score = 127 (49.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 32/135 (23%), Positives = 72/135 (53%)
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
D L + + A+T++ FS G+ L A+ + + +WN K + ++ H + +
Sbjct: 7 DPVLERYFKGHKAAITSVDFSPSGKQL-ATASWDTFLMLWNC-KPQARAFRYVGHKDVVT 64
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
S+ F +L SAS D ++++WI D + F++ H+AP + F A+G+ + +A
Sbjct: 65 SVQFSPLGNLLASASRDRTVRLWIPDKRG---KSSEFKA-HTAPVRSVDFSADGQFLATA 120
Query: 333 GQDRAFRLFSVIQDQ 347
+D++ +++++ + +
Sbjct: 121 SEDKSIKVWNMYRQR 135
Score = 125 (49.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 44/171 (25%), Positives = 72/171 (42%)
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDG 236
FKG P+ +A D + + N + + + VT++ FS G
Sbjct: 14 FKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYV-GHKDVVTSVQFSPLG 72
Query: 237 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 296
LLAS + + +W +KR S + AH + S+ F A+ L +AS D SIK+W
Sbjct: 73 N-LLASASRDRTVRLWIPDKRGKSSEFK-AHTAPVRSVDFSADGQFLATASEDKSIKVWN 130
Query: 297 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
R L H+ C +F +GR I+S +D+ +++ Q
Sbjct: 131 MYRQ----RFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQ 177
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 46/188 (24%), Positives = 83/188 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H V V L+ SA +++W R S ++ + V+ V +G LA
Sbjct: 59 HKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLA 118
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
T ++D I+++++ R + HT + FS DG+ ++S D +++IWD +
Sbjct: 119 TASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQC 178
Query: 592 IDAIHVDVSITA-LSLSPNMDVLATAHVDQNGVYLW---VNRCM-----FSGDSNIDSY- 641
++ V + +PN +A+A D V +W VN+ + SG N S+
Sbjct: 179 VNNFSDSVGFANFVDFNPNGTCIASAGSDHT-VKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 642 ASGKEIVS 649
SG I++
Sbjct: 238 PSGNYIIT 245
Score = 124 (48.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 487 TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFDVV 545
T + SAG +K+WD + L ++V V V +H + T + D +++ D++
Sbjct: 199 TCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKILDLL 258
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
R++ +GHT + FS+ G+ S G D + +W
Sbjct: 259 EGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
Score = 41 (19.5 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR 506
H+G V V+ + +I+A G +K+ D +GR
Sbjct: 227 HSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGR 261
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 147 (56.8 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 46/193 (23%), Positives = 88/193 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 537 YLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP--------YGYYFVSGGHDRV 588
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + +A G +D + + +V + FT
Sbjct: 589 ARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFT-G 647
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +LAFS +G+ LA+GA+ G + +W++ + ++ H + I +L F + +
Sbjct: 648 HKGPIHSLAFSPNGR-FLATGATDGRVLLWDIGHGLMVGELK-GHTDTIYALRFSRDGEI 705
Query: 283 LMSASADNSIKMW 295
L S S DN++++W
Sbjct: 706 LASGSMDNTVRLW 718
Score = 143 (55.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 44/152 (28%), Positives = 73/152 (48%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 615 FHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVL 674
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 640
+WD+ + + H D +I AL S + ++LA+ +D N V LW F D D
Sbjct: 675 LWDIGHGLMVGELKGHTD-TIYALRFSRDGEILASGSMD-NTVRLWDAVKAFE-DLETDD 731
Query: 641 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 672
+ + +++ S + G S+ P VH
Sbjct: 732 FTTATGHINLPENSQDLLLGTYMTKST-PVVH 762
Score = 113 (44.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 36/128 (28%), Positives = 56/128 (43%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
+ + HS G V +FS D LL S + G + +W+L+ V + H+ + F
Sbjct: 518 ILYGHS--GPVYGTSFSPDRNYLL-SCSEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQF 573
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D ++W D P LR +GH A C RF+ N +I + DR
Sbjct: 574 SPYGYYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVTCTRFHPNSNYIATGSADR 629
Query: 337 AFRLFSVI 344
RL+ V+
Sbjct: 630 TVRLWDVL 637
Score = 86 (35.3 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 27/104 (25%), Positives = 46/104 (44%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK + I H + F + L+S S D ++++W T L+ ++ GH+
Sbjct: 510 EKTASELKILYGHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTC---LVGYK-GHN 565
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 566 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 608
Score = 69 (29.3 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 23/110 (20%), Positives = 52/110 (47%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
+D ++ G + + +W++ ++L+SV + A D ++I +D+ ++
Sbjct: 459 TDDSSMIVGGFADSTVRVWSVTPKKLRSV-KAAADLSLID------------KESDDVLE 505
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + T + ++L GHS P F + ++LS +D RL+S+
Sbjct: 506 RIMDEKTASELKILY---GHSGPVYGTSFSPDRNYLLSCSEDGTVRLWSL 552
Score = 61 (26.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 31/146 (21%), Positives = 59/146 (40%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ G + ++++W++ T KKL K L ++ D + + +
Sbjct: 465 IVGGFADSTVRVWSV-TPKKLRSVKA----------AADLSLIDKESDDVLERIMDEKTA 513
Query: 214 EEL-VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
EL + + HS G V +FS D LL S + G + +W+L+ V + H+ +
Sbjct: 514 SELKILYGHS--GPVYGTSFSPDRNYLL-SCSEDGTVRLWSLQTFTCL-VGYKGHNYPVW 569
Query: 273 SLHFFANEPVLMSASADNSIKMWIFD 298
F +S D ++W D
Sbjct: 570 DTQFSPYGYYFVSGGHDRVARLWATD 595
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 558 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP--------YGYYFVSGGHDRV 609
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + VA G +D + + +V + FT
Sbjct: 610 ARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFT-G 668
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +L FS +G+ LA+GA+ G + +W++ + ++ H + + SL F + +
Sbjct: 669 HKGPIHSLTFSPNGR-FLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGEI 726
Query: 283 LMSASADNSIKMW 295
L S S DN++++W
Sbjct: 727 LASGSMDNTVRLW 739
Score = 142 (55.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 43/152 (28%), Positives = 73/152 (48%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
YH + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 636 YHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 640
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 696 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAVKAFE-DLETDD 752
Query: 641 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 672
+ + +++ S + G S+ P VH
Sbjct: 753 FTTATGHINLPENSQELLLGTYMTKST-PVVH 783
Score = 111 (44.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 34/128 (26%), Positives = 57/128 (44%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ + F
Sbjct: 539 ILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQF 594
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D ++W D P LR +GH A C R++ N ++ + DR
Sbjct: 595 SPYGYYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRYHPNSNYVATGSADR 650
Query: 337 AFRLFSVI 344
RL+ V+
Sbjct: 651 TVRLWDVL 658
Score = 87 (35.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 531 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 586
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 629
Score = 80 (33.2 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 480 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLID------------KESDDVLE 526
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 527 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
Score = 61 (26.5 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + ++++W++ T KKL K L ++ D + + + EL
Sbjct: 489 GFADSTVRVWSV-TPKKLRSVK----------QASDLSLIDKESDDVLERIMDEKTASEL 537
Query: 217 -VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ +
Sbjct: 538 KILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQ 593
Query: 276 FFANEPVLMSASADNSIKMWIFD 298
F +S D ++W D
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATD 616
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 182 (69.1 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 52/190 (27%), Positives = 91/190 (47%)
Query: 468 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVY---H 524
+S AH V+ + D TNTL+ + G G +KVWD G + + ++ + H
Sbjct: 97 KSMKAHETPVITMTIDPTNTLLATGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKH 156
Query: 525 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ +LA+ ADD +RL+D+ + R + FEGH+ I F G +LLS D ++++W
Sbjct: 157 QNTWVLASGADDSRVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Query: 585 DVILARQIDAIHVDVSITALSL---SPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS- 640
++ + I V S+ A+ P +L TA + N + W + D +D+
Sbjct: 217 NIKKRSAVRTIPVFHSVEAIGWVNGQPEEKILYTAG-EGNLILAWDWKSGSRLDPGVDTT 275
Query: 641 YASGKEIVSV 650
++ I+ V
Sbjct: 276 HSETNAIIQV 285
Score = 132 (51.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 40/155 (25%), Positives = 73/155 (47%)
Query: 477 VVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD 535
V +A S + +I+A + +++ GR +KS ++ + N LLAT
Sbjct: 64 VTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTNTLLATGGA 123
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSE-DGKWLLSSGMDGS-LRIWDVILARQID 593
+ +++++D+ + F GH I+ CF + W+L+SG D S +R+WD+ +R +
Sbjct: 124 EGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLWDLNSSRSMA 183
Query: 594 AI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
H V I L+ P L + D+ V +W
Sbjct: 184 VFEGHSSV-IRGLTFEPTGSFLLSGSRDKT-VQVW 216
Score = 130 (50.8 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 41/166 (24%), Positives = 72/166 (43%)
Query: 134 KLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPAL 193
K +D + + D+ K+I + L ++ I + +++ K P
Sbjct: 58 KDEDDYVTALAITSDS--KKLIAAFRSRLLTIYEIPSGRRIKSMKAHETPVITMTIDPTN 115
Query: 194 DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQP-LLASGASSGVI 249
++A G ++G + V +D THS RG ++AL F +LASGA +
Sbjct: 116 TLLATGGAEGLVKV----WDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRV 171
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+W+L R +V E H + I L F L+S S D ++++W
Sbjct: 172 RLWDLNSSRSMAVF-EGHSSVIRGLTFEPTGSFLLSGSRDKTVQVW 216
Score = 123 (48.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 40/180 (22%), Positives = 79/180 (43%)
Query: 415 HILRPCPENPTAVKACTISACG--NFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYA 472
H+ + TAV + G F + ++RFNL S +++ + + + + A
Sbjct: 404 HVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSNRAVWTIKA 463
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS------RWEVGCSLVKIVYHRV 526
H+ +V + ++ SA IK+WD ++ R CS ++
Sbjct: 464 HDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACS-----FNPF 518
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ LA+ + D IR+++V + V+ EGHT I + G ++S+ DG +++W +
Sbjct: 519 SRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL 578
Score = 123 (48.4 bits), Expect = 0.00088, P = 0.00088
Identities = 76/352 (21%), Positives = 143/352 (40%)
Query: 22 QRLGTENFVTVSV--GKAFHIYNCAKL-NLVLVGPQLPKKIRALASYRDYTFAAYGNHIA 78
+R+ E F+T+ G + +CA + + L + I +++ F H
Sbjct: 306 KRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQVFGVLEGHTD 365
Query: 79 VVKR--AHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMF--IWAFKGIEENLAPVGHVK 134
+V + + W AK N + L+ +++I+ N++ I F G ++ V
Sbjct: 366 IVLTLDSSEDGVWLATGAKDNTVRLW-----NLNIEDNVYKCIHVFTGHTASVTAVALGP 420
Query: 135 LDDKFTPTCIMHP--DTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPA 192
LD PT + D L + +GSQ N + ++ K
Sbjct: 421 LDVNGYPTFLASSSQDRTLKRFNLGSQLNKSDFSN----RAVWTIKAHDRDVNAIQVSKD 476
Query: 193 LDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
++A D I + + E + RG V A +F+ + L ASG+ I IW
Sbjct: 477 GRIIASASQDKTIKLWDSSTGEVVGVLRGHRRG-VWACSFNPFSRQL-ASGSGDRTIRIW 534
Query: 253 NLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG 312
N++ ++ + E H AI+ L + + ++SA+AD +K+W + + L
Sbjct: 535 NVDTQQCVQTL-EGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDR 593
Query: 313 HSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ----QSRELSQRHVAKR 360
A L RF +G ++S G D ++ + ++ Q+ EL +R A++
Sbjct: 594 VWA--LASRF--DGSLLVSGGADAVVSVWKDVTEEYIAKQAEELERRVEAEQ 641
Score = 112 (44.5 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 48/172 (27%), Positives = 78/172 (45%)
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV 519
GS LD + ++ ++ V S NTL+ H D+ + L+ R G +
Sbjct: 265 GSRLDPGVDTTHSETNAIIQVVPFSENTLL---SVHSDLSLL------LRKRVP-GEGFI 314
Query: 520 KIVYHRVNGLL------ATVADD-LVI----RLFDVVALRMVRKF---EGHTDRITDFCF 565
I ++NG A + DD L + DV++ + F EGHTD +
Sbjct: 315 TI--KKLNGSFDEVIDCAWIGDDHLAVCSNTEFIDVISTDGTQVFGVLEGHTDIVLTLDS 372
Query: 566 SEDGKWLLSSGMDGSLRIWDVILARQI-DAIHV----DVSITALSLSPNMDV 612
SEDG WL + D ++R+W++ + + IHV S+TA++L P +DV
Sbjct: 373 SEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGP-LDV 423
Score = 101 (40.6 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 28/120 (23%), Positives = 58/120 (48%)
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF--FANEPVLMSASADNSIKMWI 296
LLA+G + G++ +W++ + R H I +L F N VL S + D+ +++W
Sbjct: 117 LLATGGAEGLVKVWDIAGAYVTHSFR-GHGGVISALCFGKHQNTWVLASGADDSRVRLWD 175
Query: 297 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
+++ R + GHS+ + F G +LS +D+ +++++ + R + H
Sbjct: 176 LNSS----RSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIPVFH 231
Score = 97 (39.2 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 52/244 (21%), Positives = 101/244 (41%)
Query: 60 RALASYRDYTFAAY----GNHIAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNM 115
+ +A++R Y G I +K AH+ + N LL G +G +
Sbjct: 75 KLIAAFRSRLLTIYEIPSGRRIKSMK-AHETPVITMTIDPTNTLLATG------GAEGLV 127
Query: 116 FIWAFKGIEENLAPVGHVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGSLQLWNISTKKKL 174
+W G + GH + + C H +T++ + G+ + ++LW++++ + +
Sbjct: 128 KVWDIAGAYVTHSFRGHGGV---ISALCFGKHQNTWV--LASGADDSRVRLWDLNSSRSM 182
Query: 175 YEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSS 234
F+G P + G D + V N++ + T + +V A+ + +
Sbjct: 183 AVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQVWNIKKRSAVRTIP--VFHSVEAIGWVN 240
Query: 235 DGQP---LLASGASSGVISIWNLEK-RRLQSVIREAHD--NAIISLHFFANEPVLMSASA 288
GQP +L + +I W+ + RL + H NAII + F+ E L+S +
Sbjct: 241 -GQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFS-ENTLLSVHS 298
Query: 289 DNSI 292
D S+
Sbjct: 299 DLSL 302
Score = 87 (35.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 34/139 (24%), Positives = 66/139 (47%)
Query: 475 GEVVGV---------ACD-STNTLMISAGYHGD--IKVWDFKGRDLKSRWE--VGCSLVK 520
GEVVGV AC + + +++G GD I++W+ + E G +++K
Sbjct: 497 GEVVGVLRGHRRGVWACSFNPFSRQLASG-SGDRTIRIWNVDTQQCVQTLEGHTG-AILK 554
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
++Y + + A D +++++ + + V + H DR+ DG L+S G D
Sbjct: 555 LIYISQGTQVVSAAADGLVKVWSLSSGECVATLDNHEDRVWALASRFDGSLLVSGGADAV 614
Query: 581 LRIW-DVI---LARQIDAI 595
+ +W DV +A+Q + +
Sbjct: 615 VSVWKDVTEEYIAKQAEEL 633
Score = 56 (24.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 45/209 (21%), Positives = 85/209 (40%)
Query: 425 TAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVG-VACD 483
+ ++ T G+F + G+ ++ +N++ R + + H+ E +G V
Sbjct: 190 SVIRGLTFEPTGSFLLSGSRDKTVQVWNIKK---RSAVRTIP----VFHSVEAIGWVNGQ 242
Query: 484 STNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCS----LVKIVYHRVNGLLATVAD-DL 537
++ +AG I WD+K G L + S ++++V N LL+ +D L
Sbjct: 243 PEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSENTLLSVHSDLSL 302
Query: 538 VIRL-FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIH 596
++R ++K G D + D C W+ G D L + ID I
Sbjct: 303 LLRKRVPGEGFITIKKLNGSFDEVID-C-----AWI---G-DDHLAVCSN--TEFIDVIS 350
Query: 597 VDVSITALSLSPNMDVLATAHVDQNGVYL 625
D + L + D++ T ++GV+L
Sbjct: 351 TDGTQVFGVLEGHTDIVLTLDSSEDGVWL 379
Score = 37 (18.1 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 16/91 (17%), Positives = 39/91 (42%)
Query: 255 EKRR--LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG 312
EK+R L+ I + ++ F +NE +L++A D I ++ RL +
Sbjct: 6 EKKRFELEKSIEPIYTGGPVA--FDSNEKILVTALTDRIIGT----RSETGERLFSIKKD 59
Query: 313 HSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ ++ + +++A + R ++ +
Sbjct: 60 EDDYVTALAITSDSKKLIAAFRSRLLTIYEI 90
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 140 (54.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/209 (23%), Positives = 96/209 (45%)
Query: 476 EVVGVACDSTNTLMISAGYH-GDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATV 533
EV V C S + ++++GY G I++W L++ + S+ + ++R+ +L +
Sbjct: 61 EVTNV-CLSKDGALLASGYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSG 119
Query: 534 ADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID 593
+ D + ++D++ + + GH D+IT E L++S DG ++IWD I
Sbjct: 120 SKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQHCIQ 179
Query: 594 AI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW---VNRCMFSGDSNID-SYASGKEI 647
I H + I + ++P+ L + D N + W N S I+ + I
Sbjct: 180 TIVGHRN-PIWGIDVNPDETRLCSCTSD-NQIRFWRIPSNERQREDGSGIEPKFIVNTPI 237
Query: 648 VS-VKMPSVSSVEGCQDENSSQPDVHRTD 675
S V +P + +G + ENS+ + + D
Sbjct: 238 NSAVIIPDEINEDGSKKENSNNSNNNDID 266
Score = 138 (53.6 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 44/163 (26%), Positives = 75/163 (46%)
Query: 199 GCSDGKIHVHNVRYDE-ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKR 257
GC + +I + ++R + ++ VT + S DG LLASG S G I IW++
Sbjct: 34 GCGE-RISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGA-LLASGYSDGSIRIWSMSDY 91
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
+LQ+V H ++ ++ F +L+S S D + +W T G L R R GH
Sbjct: 92 QLQAVFN-GHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESG---LFRLR-GHRDQI 146
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKR 360
++ H++++ +D F I D +++ Q V R
Sbjct: 147 TSVKLLERSNHLITSSKDG----FIKIWDTETQHCIQTIVGHR 185
Score = 116 (45.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 40/190 (21%), Positives = 80/190 (42%)
Query: 437 NFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYA-HNGEVVGVACDSTNTLMISAGYH 495
N V+ AG +E + ++ G ++S + A H ++ ++ S + +++S
Sbjct: 358 NKFVITLAGNSLEAYEIKEKEQGGGAFEVSSTLDQAGHRSDIRSLSLSSNDQMLVSTSSE 417
Query: 496 GDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL-VIRLFDVVALRMVRKFE 554
+KVW+ K L + C L V I +F++ + V +
Sbjct: 418 S-VKVWNMKS--LSCIRSIACDYGLCTVFAPGNLHVIVGTKTGTIEVFELASAARVASIK 474
Query: 555 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH--VDVSITALSLSPNMD 611
H + + D + + S G D ++ WD ++A Q ++ H +++S+T +L D
Sbjct: 475 AHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQENSKHKVLNLSLTK-TLKVESD 533
Query: 612 VLATAHVDQN 621
VLA + N
Sbjct: 534 VLALKYSADN 543
Score = 116 (45.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
++A G SDG I + ++ D +L + RG+VT + F+ G +L SG+ + +W++
Sbjct: 73 LLASGYSDGSIRIWSMS-DYQLQAVFNGHRGSVTTMTFNRLGN-ILVSGSKDTEVIVWDI 130
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+R H + I S+ L+++S D IK+W +T ++ GH
Sbjct: 131 ITESGLFRLR-GHRDQITSVKLLERSNHLITSSKDGFIKIWDTETQ----HCIQTIVGHR 185
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
P I + + S D R + + +++ RE
Sbjct: 186 NPIWGIDVNPDETRLCSCTSDNQIRFWRIPSNERQRE 222
Score = 108 (43.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 31/140 (22%), Positives = 62/140 (44%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G +GS+++W++S + F G +++ G D ++ V ++ + L
Sbjct: 77 GYSDGSIRIWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGL 136
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLH 275
R +T++ L+ S + G I IW+ E + +Q+++ H N I +
Sbjct: 137 FRL-RGHRDQITSVKLLERSNHLITS-SKDGFIKIWDTETQHCIQTIV--GHRNPIWGID 192
Query: 276 FFANEPVLMSASADNSIKMW 295
+E L S ++DN I+ W
Sbjct: 193 VNPDETRLCSCTSDNQIRFW 212
Score = 102 (41.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 61/253 (24%), Positives = 97/253 (38%)
Query: 430 CTISACGNFAVL-GTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTL 488
CT+ A GN V+ GT G IE F L S S AH G V +
Sbjct: 440 CTVFAPGNLHVIVGTKTGTIEVFELASAARVASIK--------AHEGSVWSLVLTPDLRG 491
Query: 489 MISAGYHGDIKVWDFK--GRDLKSRWEV-GCSLVKIV----------YHRVNGLLATVAD 535
+ S G +K WDF+ S+ +V SL K + Y N LA
Sbjct: 492 VTSGGADKLVKFWDFELIASQENSKHKVLNLSLTKTLKVESDVLALKYSADNKFLAVSLL 551
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 595
D +++F ++ GH + S+D +++ D +++IW + +
Sbjct: 552 DNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSF 611
Query: 596 HV-DVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPS 654
D SI +S P+ +A D+ Y W + F I+++ E+ S+ M S
Sbjct: 612 FAHDDSIMQVSFIPSTHHFISASKDKRIKY-W-DADKFEHIQTIEAHHG--EVWSLAMGS 667
Query: 655 VSS--VEGCQDEN 665
V + G D +
Sbjct: 668 VGDFFISGSHDRS 680
Score = 82 (33.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 25/118 (21%), Positives = 50/118 (42%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL-KSRWEVGCSLVKIVYHRVN 527
S Y H V+ + +TL+I+ +IK+W D KS + S++++ +
Sbjct: 568 SLYGHKLPVMCLDISDDSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPST 627
Query: 528 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ + D I+ +D ++ E H + G + +S D S+RI++
Sbjct: 628 HHFISASKDKRIKYWDADKFEHIQTIEAHHGEVWSLAMGSVGDFFISGSHDRSIRIFN 685
Score = 82 (33.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 29/113 (25%), Positives = 50/113 (44%)
Query: 235 DGQPLLASGASSGVISIWNLEKRRL-QSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
DG LA ISIW+L K+ L QS+ E + ++ + +L S +D SI+
Sbjct: 25 DGSGKLAITGCGERISIWDLRKQVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIR 84
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
+W D +L +GH + F G ++S +D ++ +I +
Sbjct: 85 IWSMS----DYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITE 133
Score = 70 (29.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 27/131 (20%), Positives = 50/131 (38%)
Query: 152 NKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR 211
N ++ GS++ + +W+I T+ L+ +G + + DG I + +
Sbjct: 114 NILVSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLERSNHLITSSKDGFIKIWDTE 173
Query: 212 YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAI 271
+ T R + + + D + L S S I W R+ S R+ D +
Sbjct: 174 TQHCIQTIV-GHRNPIWGIDVNPD-ETRLCSCTSDNQIRFW-----RIPSNERQREDGSG 226
Query: 272 ISLHFFANEPV 282
I F N P+
Sbjct: 227 IEPKFIVNTPI 237
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 125 (49.1 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 371 HQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 429
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 122 (48.0 bits), Expect = 4.8e-12, Sum P(2) = 4.8e-12
Identities = 45/157 (28%), Positives = 74/157 (47%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVI 249
P +A G D + ++ E FT R V ++++S DG+ L ASG +G I
Sbjct: 124 PTGKYLASGSGDTTVRFWDL--STETPHFTCQGHRHWVLSISWSPDGKKL-ASGCKNGQI 180
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV--LMSASADNSIKMWIFDTTDGDP 304
+W+ + H I +L + AN + S+S D S+++W DTT G
Sbjct: 181 LLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW--DTTAG-- 236
Query: 305 RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 237 RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 106 (42.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 37/161 (22%), Positives = 72/161 (44%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + +++ W++ST+ + +G P +A GC +G+I + + +++
Sbjct: 132 GSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQV 191
Query: 217 VTFTHSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+TAL++ P +AS + G + +W+ R + ++ H ++
Sbjct: 192 GRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERILT-GHTQSVT 250
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
L + + +L SAS D +IK+W DG L R GH
Sbjct: 251 CLRW-GGDGLLYSASQDRTIKVW--RAHDGV--LCRTLQGH 286
Score = 93 (37.8 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 39/168 (23%), Positives = 78/168 (46%)
Query: 459 RGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLK--SRWEVGC 516
RGS ++ ER+ +N V G + ++S + +W D K +R
Sbjct: 319 RGSLQELKERALSRYN-LVRGRGLER----LVSGSDDFTLFLWS-PAEDKKPLARMTGHQ 372
Query: 517 SLV-KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
+L+ ++++ + ++A+ + D I+L+D + + GH + +S D + L+S
Sbjct: 373 ALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSG 432
Query: 576 GMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 620
D +L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 433 SSDSTLKVWDVKAQKLAADLPG-HAD-EVYAVDWSPDGQRVASGGKDK 478
Score = 67 (28.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/107 (26%), Positives = 41/107 (38%)
Query: 153 KVIVGSQEGSLQLWNISTKKK----LYEFKGW--GXXXXXXXXXPALDVVAVGCSDGKIH 206
K+ G + G + LW+ ST K+ L W P VA DG +
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKDGSVR 229
Query: 207 VHNVRYDE-ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
V + E + H+ +VT L + DG LL S + I +W
Sbjct: 230 VWDTTAGRCERILTGHTQ--SVTCLRWGGDG--LLYSASQDRTIKVW 272
Score = 65 (27.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--QGHRHWVLSISWSP 166
Query: 325 NGRHILS 331
+G+ + S
Sbjct: 167 DGKKLAS 173
Score = 44 (20.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
GHS + + F G+++ S D R + +
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 555 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP--------YGYYFVSGGHDRV 606
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + VA G +D + + +V + FT
Sbjct: 607 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT-G 665
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +L FS +G+ LA+GA+ G + +W++ + ++ H + + SL F + +
Sbjct: 666 HKGPIHSLTFSPNGR-FLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGEI 723
Query: 283 LMSASADNSIKMW 295
L S S DN++++W
Sbjct: 724 LASGSMDNTVRLW 736
Score = 138 (53.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 633 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 692
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 640
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 693 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAIKAFE-DLETDD 749
Query: 641 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 672
+ + +++ S + G S+ P VH
Sbjct: 750 FTTATGHINLPENSQELLLGTYMTKST-PVVH 780
Score = 114 (45.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ + F
Sbjct: 536 ILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQF 591
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D ++W D P LR +GH A C RF+ N ++ + DR
Sbjct: 592 SPYGYYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADR 647
Query: 337 AFRLFSVI 344
RL+ V+
Sbjct: 648 TVRLWDVL 655
Score = 87 (35.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 528 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 583
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 584 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 626
Score = 80 (33.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 477 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLID------------KESDDVLE 523
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 524 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 570
Score = 61 (26.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + ++++W++ T KKL K L ++ D + + + EL
Sbjct: 486 GFADSTVRVWSV-TPKKLRSVK----------QASDLSLIDKESDDVLERIMDEKTASEL 534
Query: 217 -VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ +
Sbjct: 535 KILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQ 590
Query: 276 FFANEPVLMSASADNSIKMWIFD 298
F +S D ++W D
Sbjct: 591 FSPYGYYFVSGGHDRVARLWATD 613
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 557 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP--------YGYYFVSGGHDRV 608
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + VA G +D + + +V + FT
Sbjct: 609 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT-G 667
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +L FS +G+ LA+GA+ G + +W++ + ++ H + + SL F + +
Sbjct: 668 HKGPIHSLTFSPNGR-FLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGEI 725
Query: 283 LMSASADNSIKMW 295
L S S DN++++W
Sbjct: 726 LASGSMDNTVRLW 738
Score = 138 (53.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 640
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 695 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAIKAFE-DLETDD 751
Query: 641 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 672
+ + +++ S + G S+ P VH
Sbjct: 752 FTTATGHINLPENSQELLLGTYMTKST-PVVH 782
Score = 114 (45.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ + F
Sbjct: 538 ILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQF 593
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D ++W D P LR +GH A C RF+ N ++ + DR
Sbjct: 594 SPYGYYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADR 649
Query: 337 AFRLFSVI 344
RL+ V+
Sbjct: 650 TVRLWDVL 657
Score = 87 (35.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 530 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 585
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 628
Score = 80 (33.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 479 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQASDLSLID------------KESDDVLE 525
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 526 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + ++++W++ T KKL K L ++ D + + + EL
Sbjct: 488 GFADSTVRVWSV-TPKKLRSVK----------QASDLSLIDKESDDVLERIMDEKTASEL 536
Query: 217 -VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ +
Sbjct: 537 KILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQ 592
Query: 276 FFANEPVLMSASADNSIKMWIFD 298
F +S D ++W D
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATD 615
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 557 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP--------YGYYFVSGGHDRV 608
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + VA G +D + + +V + FT
Sbjct: 609 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT-G 667
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +L FS +G+ LA+GA+ G + +W++ + ++ H + + SL F + +
Sbjct: 668 HKGPIHSLTFSPNGR-FLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGEI 725
Query: 283 LMSASADNSIKMW 295
L S S DN++++W
Sbjct: 726 LASGSMDNTVRLW 738
Score = 138 (53.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 640
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 695 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAVKAFE-DVETDD 751
Query: 641 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 672
+ + +++ S + G S+ P VH
Sbjct: 752 FTTATGHINLPENSQELLLGTYMTKST-PVVH 782
Score = 114 (45.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ + F
Sbjct: 538 ILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQF 593
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D ++W D P LR +GH A C RF+ N ++ + DR
Sbjct: 594 SPYGYYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADR 649
Query: 337 AFRLFSVI 344
RL+ V+
Sbjct: 650 TVRLWDVL 657
Score = 87 (35.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 530 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 585
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 586 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 628
Score = 79 (32.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 479 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLID------------KESDDVLE 525
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 526 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 572
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + ++++W++ T KKL K L ++ D + + + EL
Sbjct: 488 GFADSTVRVWSV-TPKKLRSVK----------QAADLSLIDKESDDVLERIMDEKTASEL 536
Query: 217 -VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ +
Sbjct: 537 KILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQ 592
Query: 276 FFANEPVLMSASADNSIKMWIFD 298
F +S D ++W D
Sbjct: 593 FSPYGYYFVSGGHDRVARLWATD 615
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 144 (55.7 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 46/193 (23%), Positives = 87/193 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 558 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP--------YGYYFVSGGHDRV 609
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + VA G +D + + +V + FT
Sbjct: 610 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT-G 668
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +L FS +G+ LA+GA+ G + +W++ + ++ H + + SL F + +
Sbjct: 669 HKGPIHSLTFSPNGR-FLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGEI 726
Query: 283 LMSASADNSIKMW 295
L S S DN++++W
Sbjct: 727 LASGSMDNTVRLW 739
Score = 138 (53.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 42/152 (27%), Positives = 73/152 (48%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 636 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDS 640
+WD+ + + H D ++ +L S + ++LA+ +D N V LW F D D
Sbjct: 696 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLWDAVKAFE-DLETDD 752
Query: 641 YASGKEIVSVKMPSVSSVEGCQDENSSQPDVH 672
+ + +++ S + G S+ P VH
Sbjct: 753 FTTATGHINLPENSQELLLGTYMTKST-PVVH 783
Score = 114 (45.2 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ + F
Sbjct: 539 ILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQF 594
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D ++W D P LR +GH A C RF+ N ++ + DR
Sbjct: 595 SPYGYYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADR 650
Query: 337 AFRLFSVI 344
RL+ V+
Sbjct: 651 TVRLWDVL 658
Score = 87 (35.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 531 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 586
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 587 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 629
Score = 79 (32.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 480 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLID------------KESDDVLE 526
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 527 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 573
Score = 61 (26.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + ++++W++ T KKL K L ++ D + + + EL
Sbjct: 489 GFADSTVRVWSV-TPKKLRSVK----------QAADLSLIDKESDDVLERIMDEKTASEL 537
Query: 217 -VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ +
Sbjct: 538 KILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQ 593
Query: 276 FFANEPVLMSASADNSIKMWIFD 298
F +S D ++W D
Sbjct: 594 FSPYGYYFVSGGHDRVARLWATD 616
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 161 (61.7 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 57/235 (24%), Positives = 103/235 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D +++++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D +G R F +GH + I F+ NG + D RLF + DQ+
Sbjct: 210 LW--DIREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260
Score = 136 (52.9 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 40/150 (26%), Positives = 70/150 (46%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW+I F G P + A G D
Sbjct: 194 PDTRL--FVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+ ++H ++ +T++AFS G+ LLA G ++W+ K V+
Sbjct: 252 LFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLA-GYDDFNCNVWDTLKADRAGVLA- 309
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 310 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 118 (46.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 40/159 (25%), Positives = 72/159 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H G+V+ ++ L +S K+WD + + + S + + NG A
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFA 242
Query: 532 TVADDLVIRLFDVVALR--MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
T +DD RLFD+ A + MV + IT FS+ G+ LL+ D + +WD + A
Sbjct: 243 TGSDDATCRLFDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKA 302
Query: 590 RQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 303 DRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 81 (33.6 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 26/123 (21%), Positives = 55/123 (44%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R +GH+ C RF + + + S+G D L+ +
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
Score = 76 (31.8 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 125 (49.1 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 429
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 430 VSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 120 (47.3 bits), Expect = 7.7e-12, Sum P(2) = 7.7e-12
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVI 249
P +A G D + ++ E FT R V ++++S DG+ L ASG +G I
Sbjct: 124 PTGKYLASGSGDTTVRFWDL--STETPHFTCKGHRHWVLSISWSPDGRKL-ASGCKNGQI 180
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV--LMSASADNSIKMWIFDTTDGDP 304
+W+ + H I L + AN + S+S D S+++W DTT G
Sbjct: 181 LLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIW--DTTAG-- 236
Query: 305 RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 237 RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 106 (42.4 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 38/161 (23%), Positives = 71/161 (44%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + +++ W++ST+ + KG P +A GC +G+I + + +++
Sbjct: 132 GSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWDPSTGKQV 191
Query: 217 VTFTHSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+T L++ P +AS + G + IW+ R + ++ H ++
Sbjct: 192 GRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERILT-GHTQSVT 250
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
L + + +L SAS D +IK+W DG L R GH
Sbjct: 251 CLRW-GGDGLLYSASQDRTIKVW--RAHDGV--LCRTLQGH 286
Score = 91 (37.1 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 520 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436
Query: 580 SLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 620
+L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 437 TLKVWDVKAQKLAMDLPG-HAD-EVYAVDWSPDGQRVASGGKDK 478
Score = 72 (30.4 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 28/107 (26%), Positives = 42/107 (39%)
Query: 153 KVIVGSQEGSLQLWNISTKKK----LYEFKGW--GXXXXXXXXXPALDVVAVGCSDGKIH 206
K+ G + G + LW+ ST K+ L W G P VA DG +
Sbjct: 170 KLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVR 229
Query: 207 VHNVRYDE-ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
+ + E + H+ +VT L + DG LL S + I +W
Sbjct: 230 IWDTTAGRCERILTGHTQ--SVTCLRWGGDG--LLYSASQDRTIKVW 272
Score = 70 (29.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 21/100 (21%), Positives = 47/100 (47%)
Query: 530 LATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
L + +DD + L+ + + + GH I FS D + + S+ D S+++WD
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRT 403
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + ++ HV ++ ++ S + +L + D + +W
Sbjct: 404 GKYLASLRGHV-AAVYQIAWSADSRLLVSGSSDST-LKVW 441
Score = 68 (29.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--KGHRHWVLSISWSP 166
Query: 325 NGRHILS 331
+GR + S
Sbjct: 167 DGRKLAS 173
Score = 44 (20.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
GHS + + F G+++ S D R + +
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 156 (60.0 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 51/207 (24%), Positives = 92/207 (44%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
MH T ++ SQ+G L +W+ T K++ P+ + VA G D
Sbjct: 61 MHWSTDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 205 IHVHNVRYDEELVTFTHSMR---GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
++N++ E V + + G ++ F D + +SG ++ ++W++E + ++
Sbjct: 121 CSIYNLKTREGNVKVSRELSAHTGYLSCCRFLDDNSIVTSSGDTT--CALWDIETGQQKT 178
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
V H +SL + + +S + D + K+W D +G R F SGH + I
Sbjct: 179 VFL-GHTGDCMSLAVSPDFKLFISGACDATAKLW--DVREGTCRQT-F-SGHESDINAIC 233
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQ 348
F+ NG I + D RLF + DQ+
Sbjct: 234 FFPNGEAICTGSDDATCRLFDLRADQE 260
Score = 140 (54.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 47/208 (22%), Positives = 92/208 (44%)
Query: 90 SRHSAKVNLLLLFGEH-ILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S H+ ++ ++ I++ D +W + ++ +GH D + + PD
Sbjct: 140 SAHTGYLSCCRFLDDNSIVTSSGDTTCALWDIETGQQKTVFLGHT--GDCMS--LAVSPD 195
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
L I G+ + + +LW++ F G P + + G D +
Sbjct: 196 FKL--FISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAICTGSDDATCRLF 253
Query: 209 NVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
++R D+EL+ ++H S+ +T++AFS G+ LLA G +IW+ K ++ H
Sbjct: 254 DLRADQELIVYSHESIICGITSVAFSRSGRLLLA-GYDDFNCNIWDSLKAERVGIL-SGH 311
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
DN + L A+ + + S D+ +K+W
Sbjct: 312 DNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 117 (46.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 41/159 (25%), Positives = 71/159 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H G+ + +A L IS K+WD + + + S + + NG +
Sbjct: 183 HTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGEAIC 242
Query: 532 TVADDLVIRLFDVVALR--MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
T +DD RLFD+ A + +V E IT FS G+ LL+ D + IWD + A
Sbjct: 243 TGSDDATCRLFDLRADQELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNCNIWDSLKA 302
Query: 590 RQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
++ + H D ++ L ++ + +AT D + + +W
Sbjct: 303 ERVGILSGH-DNRVSCLGVTADGMAVATGSWD-SFLKIW 339
Score = 81 (33.6 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + R LL DD ++D + V GH +R++ + DG + +
Sbjct: 271 CGITSVAFSRSGRLLLAGYDDFNCNIWDSLKAERVGILSGHDNRVSCLGVTADGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
Score = 60 (26.2 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 30/114 (26%), Positives = 52/114 (45%)
Query: 246 SGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT-TDGDP 304
SGV + ++ R +++ H I ++H+ + +L+SAS D + +W DT T
Sbjct: 35 SGVEVVGRIQMRTRRTL--RGHLAKIYAMHWSTDSKLLVSASQDGKLIVW--DTYTTNKV 90
Query: 305 RLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSVIQDQQ----SRELS 353
+ RS S C YA +G + G D ++++ + SRELS
Sbjct: 91 HAIPLRS--SWVMTCA--YAPSGNFVACGGLDNMCSIYNLKTREGNVKVSRELS 140
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 170 (64.9 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 53/184 (28%), Positives = 88/184 (47%)
Query: 484 STNTLMISAGYHG-DIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLLATVADDLVIR 540
S +L ++G H ++W F R R G + + +H + LAT + D +R
Sbjct: 393 SPYSLYFASGSHDRTARLWSFD-RTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVD 598
L+ VR F GH + FS +GK+L S+G D L++WD+ + H D
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTD 511
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSV 658
+IT+L+ SP+ ++A+A +D N V +W R + + + S E+V V +S+V
Sbjct: 512 -NITSLTFSPDSSLIASASMD-NSVRVWDIR---NTHCSAPTDGSSSELVGVYTGQMSNV 566
Query: 659 EGCQ 662
Q
Sbjct: 567 LSVQ 570
Score = 150 (57.9 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 50/175 (28%), Positives = 82/175 (46%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + + +LW+ L + G P + +A G +D + + + + +
Sbjct: 402 GSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSV 461
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
FT RG V +LAFS +G+ LAS + +W+L L +R DN I SL F
Sbjct: 462 RLFT-GHRGPVLSLAFSPNGK-YLASAGEDQRLKLWDLASGTLFKELRGHTDN-ITSLTF 518
Query: 277 FANEPVLMSASADNSIKMW-IFDT-----TDGDP-RLLRFRSGHSAPPLCIRFYA 324
+ ++ SAS DNS+++W I +T TDG L+ +G + L ++F A
Sbjct: 519 SPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVGVYTGQMSNVLSVQFMA 573
Score = 75 (31.5 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 25/105 (23%), Positives = 46/105 (43%)
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
LLA+G + I +W+L ++L+ E H + +H + ++ D D
Sbjct: 282 LLAAGFDNSCIKLWSLRSKKLKP---EPHRVDVSRIHLACD---ILEEEDDED------D 329
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ ++LR GH P RF A+ +LS +D + R + +
Sbjct: 330 DVGTEMKVLR---GHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL 371
Score = 67 (28.6 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 24/81 (29%), Positives = 34/81 (41%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
V+R H + S F A+ L+S S D SI+ W D +L GH+ P +
Sbjct: 337 VLR-GHCGPVYSTRFLADSSGLLSCSEDMSIRYW--DLGSFTNTVLY--QGHAYPVWDVD 391
Query: 322 FYANGRHILSAGQDRAFRLFS 342
+ S DR RL+S
Sbjct: 392 ISPYSLYFASGSHDRTARLWS 412
Score = 37 (18.1 bits), Expect = 2.2e-10, Sum P(3) = 2.2e-10
Identities = 8/31 (25%), Positives = 17/31 (54%)
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKK 172
T + P++ L + G ++LW++ +KK
Sbjct: 273 TAEISPESKL--LAAGFDNSCIKLWSLRSKK 301
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 157 (60.3 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 51/196 (26%), Positives = 89/196 (45%)
Query: 152 NKVIVGSQEGSLQLWNISTKKKLYEF--KG--WGXXXXXXXXXPALDVVAVGCSDGKIHV 207
N ++ GS + + ++W+ + +L F G W P L V A C+ V
Sbjct: 1753 NYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRLFDV 1812
Query: 208 H-NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA 266
N Y E V H A+T++ FS G L+AS + +I +WN++ + + I +A
Sbjct: 1813 SSNTIYRE--VAKLHGHTRAITSITFSPSGN-LIASTSEDLLIKVWNVQTHKAEYTIEKA 1869
Query: 267 HDNAIISLHFF-ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
H++ I + F NE L+S S D S K+W TT L + C+ + +
Sbjct: 1870 HNDPINCISFNPTNECELISCSDDYSTKVWSRFTTS---TTLSTEGSTNTIKHCV-YSPD 1925
Query: 326 GRHILSAGQDRAFRLF 341
G++I + +D + ++
Sbjct: 1926 GKYIATVSRDCSIAVY 1941
Score = 136 (52.9 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 53/206 (25%), Positives = 95/206 (46%)
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 485
A+ + T S GN + I+ +N+Q+ + Y E+ AHN + ++ + T
Sbjct: 1830 AITSITFSPSGNLIASTSEDLLIKVWNVQT--HKAEYT--IEK---AHNDPINCISFNPT 1882
Query: 486 NTL-MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVADDLVIRLFD 543
N +IS KVW E + +K VY +ATV+ D I ++
Sbjct: 1883 NECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRDCSIAVYL 1942
Query: 544 VVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVS 600
+ +++ + +GHTD + +FC FS D K L+S G D +LR+W++ +++ + H S
Sbjct: 1943 CSSKKLLFRLKGHTDWV-NFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGHSS-S 2000
Query: 601 ITALSLSPNMDVLATAHVDQNGVYLW 626
I + + + +A D V +W
Sbjct: 2001 IEKAFFTKDQKYIISASFD-GSVKVW 2025
Score = 126 (49.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 46/211 (21%), Positives = 85/211 (40%)
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
C PD+ K++ G + +L++WNI T+K+L KG + D
Sbjct: 1962 CTFSPDS--KKLVSGGWDFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFD 2019
Query: 203 GKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV 262
G + V + ++ E+ + H R ++ + SSD + S + G+I W +
Sbjct: 2020 GSVKVWDAQFGSEITSLRHQTR--ISDVVSSSDASGRIFSSSDDGIIKSWYPVAGSCLAT 2077
Query: 263 IREAHDNAIISLHFFANEP----------VLMSASADNSIKMWIFDTTD-GDPRLLRFRS 311
+ H I + F N S+S+D + + I ++D G +L F S
Sbjct: 2078 LT-GHSGPIKQVQFNPNSGGGGSSSFSSFSSFSSSSDAPVTLSIASSSDDGTVKLWEFNS 2136
Query: 312 GHSAPPL-------CIRFYANGRHILSAGQD 335
+ C+ F +G+++ + GQD
Sbjct: 2137 ATATTSAHKGSINQCV-FSKDGKYVATCGQD 2166
Score = 124 (48.7 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 55/247 (22%), Positives = 98/247 (39%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQ-EG 161
G I S D + I+ E L VGH +C D K + S +
Sbjct: 1534 GSMIASAGKDSIIHIFKASNGSELLTLVGHSNWI-----SCFSFSDD--GKTLASSSWDN 1586
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVHNVRYDEELVTFT 220
++ +W++ ++++FK P + + + C+ D I + N F
Sbjct: 1587 TVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFR 1646
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWN----LEKRRLQSVIREAHD-NAIISLH 275
+ V + +S DG L+AS + G I IWN + K RL+ VI + +I S
Sbjct: 1647 SAHSKPVNSCCWSPDGT-LIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCK 1705
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F AN +++ + N + + FD +L+ HS +G +I++ D
Sbjct: 1706 FSANSKQILATTMKNDVLL--FDVNS--QKLISVMGNHSKSVNHCSLSNDGNYIVTGSDD 1761
Query: 336 RAFRLFS 342
+++S
Sbjct: 1762 ATAKVWS 1768
Score = 120 (47.3 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 42/162 (25%), Positives = 66/162 (40%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVG-CSLVKIVYHRVNGLL 530
H+ V + + +++ KVW G L + G C + + LL
Sbjct: 1739 HSKSVNHCSLSNDGNYIVTGSDDATAKVWSSTLGTQLTNFLIPGDCWANCLAFSPTQPLL 1798
Query: 531 ATVADDLVIRLFDVVA---LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
A A D +RLFDV + R V K GHT IT FS G + S+ D +++W+V
Sbjct: 1799 AVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQ 1858
Query: 588 LARQ---IDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ I+ H D I +S +P + + D +W
Sbjct: 1859 THKAEYTIEKAHND-PINCISFNPTNECELISCSDDYSTKVW 1899
Score = 109 (43.4 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 48/203 (23%), Positives = 85/203 (41%)
Query: 143 CIMHPD-TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS 201
C+ PD Y+ V S++ S+ ++ S+KK L+ KG P + G
Sbjct: 1920 CVYSPDGKYIATV---SRDCSIAVYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGW 1976
Query: 202 DGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE-KRRL 259
D + V N++ +EL+ HS ++ F+ D Q + S + G + +W+ + +
Sbjct: 1977 DFNLRVWNIKTQKELLCLKGHS--SSIEKAFFTKD-QKYIISASFDGSVKVWDAQFGSEI 2033
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 319
S+ + + ++S + + S+S D IK W G L +GHS P
Sbjct: 2034 TSLRHQTRISDVVSSSDASGR--IFSSSDDGIIKSWY--PVAGS--CLATLTGHSGPIKQ 2087
Query: 320 IRFYANGRHILSAGQDRAFRLFS 342
++F N G +F FS
Sbjct: 2088 VQFNPNS----GGGGSSSFSSFS 2106
Score = 95 (38.5 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 38/145 (26%), Positives = 61/145 (42%)
Query: 202 DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
D + V ++ ++ F R AV FS LL S A I I+N + +
Sbjct: 1585 DNTVIVWDLIVGNQIHQFKDHSR-AVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFR 1643
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWI-FDTTDGD--PRLLRFRSGHSAPPL 318
R AH + S + + ++ S+S D +IK+W FDT D ++ + +
Sbjct: 1644 NFRSAHSKPVNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKS 1703
Query: 319 CIRFYANGRHILSAGQDRAFRLFSV 343
C +F AN + IL+ LF V
Sbjct: 1704 C-KFSANSKQILATTMKNDVLLFDV 1727
Score = 93 (37.8 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
Identities = 16/67 (23%), Positives = 38/67 (56%)
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 595
D +R++++ + + +GH+ I F++D K+++S+ DGS+++WD +I ++
Sbjct: 1977 DFNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISASFDGSVKVWDAQFGSEITSL 2036
Query: 596 HVDVSIT 602
I+
Sbjct: 2037 RHQTRIS 2043
Score = 84 (34.6 bits), Expect = 7.9e-10, Sum P(2) = 7.9e-10
Identities = 37/158 (23%), Positives = 70/158 (44%)
Query: 483 DSTNTLMI-SAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRL 541
D+ TL I S+ G +K+W+F + G S+ + V+ + +AT D V+ +
Sbjct: 2113 DAPVTLSIASSSDDGTVKLWEFNSATATTSAHKG-SINQCVFSKDGKYVATCGQDCVLNI 2171
Query: 542 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM-DGSLRI----WDVILARQIDAIH 596
+D + K +T F+ G +L G+ DG+L + W +L ++
Sbjct: 2172 WDAKT-HINLKTMIFESPVTTCSFNRSG--VLFIGLQDGTLEVYSKDWKTVLHKE----K 2224
Query: 597 VDVSITALSLSPNMDVLATA---HVDQNGVYLWVNRCM 631
+ IT S P++++ +T ++D W N C+
Sbjct: 2225 TNGKITRSSAHPSLNIQSTESPDYIDLFAFSTWTN-CV 2261
Score = 83 (34.3 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 36/141 (25%), Positives = 59/141 (41%)
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHF 276
T T GA TA +S DG ++AS +I I+ L +++ H N I F
Sbjct: 1517 TITGLEDGA-TACCYSRDGS-MIASAGKDSIIHIFKASNGSELLTLV--GHSNWISCFSF 1572
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL-SAGQD 335
+ L S+S DN++ +W D G+ ++ +F+ A C F ++L S D
Sbjct: 1573 SDDGKTLASSSWDNTVIVW--DLIVGN-QIHQFKDHSRAVNYC-EFSPTANNLLMSCAWD 1628
Query: 336 RAFRLFSVIQDQQSRELSQRH 356
+ +F+ R H
Sbjct: 1629 SSIIIFNTSDKNIFRNFRSAH 1649
Score = 72 (30.4 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 37/143 (25%), Positives = 60/143 (41%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQS-GISRGSYLDMSERSNYAHNGEVVGVACDST 485
V CT S V +GGW FNL+ I L + H+ +
Sbjct: 1959 VNFCTFSPDSKKLV---SGGW--DFNLRVWNIKTQKELLCLK----GHSSSIEKAFFTKD 2009
Query: 486 NTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 543
+ISA + G +KVWD + G ++ S R + S V + +G + + +DD +I+ +
Sbjct: 2010 QKYIISASFDGSVKVWDAQFGSEITSLRHQTRISDV-VSSSDASGRIFSSSDDGIIKSWY 2068
Query: 544 VVALRMVRKFEGHTDRITDFCFS 566
VA + GH+ I F+
Sbjct: 2069 PVAGSCLATLTGHSGPIKQVQFN 2091
Score = 67 (28.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 44/241 (18%), Positives = 89/241 (36%)
Query: 391 NVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIER 450
N + D A A VW + LG + S +G +
Sbjct: 1753 NYIVTGSDDATAKVW---SSTLGTQLTNFLIPGDCWANCLAFSPTQPLLAVGATDCTVRL 1809
Query: 451 FNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS 510
F++ S Y ++++ + H + + + L+ S IKVW+ + +
Sbjct: 1810 FDVSSNTI---YREVAKL--HGHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEY 1864
Query: 511 RWEVGCS--LVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSE 567
E + + I ++ N L + +DD +++ EG T+ I +S
Sbjct: 1865 TIEKAHNDPINCISFNPTNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSP 1924
Query: 568 DGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
DGK++ + D S+ ++ + + + H D + + SP+ L + D N + +
Sbjct: 1925 DGKYIATVSRDCSIAVYLCSSKKLLFRLKGHTDW-VNFCTFSPDSKKLVSGGWDFN-LRV 1982
Query: 626 W 626
W
Sbjct: 1983 W 1983
Score = 61 (26.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
LA D + L D+ + ++ R IT F + + L+S D SL +W+ +
Sbjct: 2334 LAIGTFDGTVELLDIASGKLRRILTTQVSSITSLKFLDSTR-LVSVSNDRSLIVWNFSTS 2392
Query: 590 R-QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVN 628
+ + IH IT++ + N + A D+NG ++N
Sbjct: 2393 SIENEFIHQS-PITSMDIHQNQIITA----DKNGNIYFLN 2427
Score = 52 (23.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 23/110 (20%), Positives = 53/110 (48%)
Query: 519 VKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
V+ V +G LLA + +++F + + V + + +T FS + K+L
Sbjct: 2281 VESVEFSTSGDLLAAGSRTKQVKIFSPLNDKPVTH-QTSSSYVTSLSFSPNDKYLAIGTF 2339
Query: 578 DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 626
DG++ + D+ + + VS IT+L + +++ ++ D++ + +W
Sbjct: 2340 DGTVELLDIASGKLRRILTTQVSSITSLKFLDSTRLVSVSN-DRS-LIVW 2387
Score = 44 (20.5 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 626 WVNRCMFSGDS 636
WVN C FS DS
Sbjct: 1958 WVNFCTFSPDS 1968
Score = 37 (18.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSG 456
V + + S + +GT G +E ++ SG
Sbjct: 2322 VTSLSFSPNDKYLAIGTFDGTVELLDIASG 2351
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 123 (48.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 372 HQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 430
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 431 VSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 120 (47.3 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 45/157 (28%), Positives = 74/157 (47%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVI 249
P +A G D + ++ E FT R V ++++S DG+ L ASG +G I
Sbjct: 125 PTGKYLASGSGDTTVRFWDL--STETPHFTCQGHRHWVLSISWSPDGKKL-ASGCKNGQI 181
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHF---FANEPV--LMSASADNSIKMWIFDTTDGDP 304
+W+ + H I +L + AN + S+S D S+++W DTT G
Sbjct: 182 LLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVW--DTTAG-- 237
Query: 305 RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 238 RCERTLTGHAQSVTCLRWGGDGL-LYSASQDRTIKVW 273
Score = 102 (41.0 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 37/161 (22%), Positives = 71/161 (44%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + +++ W++ST+ + +G P +A GC +G+I + + +++
Sbjct: 133 GSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGKQV 192
Query: 217 VTFTHSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+TAL++ P +AS + G + +W+ R + + H ++
Sbjct: 193 GRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVRVWDTTAGRCERTLT-GHAQSVT 251
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
L + + +L SAS D +IK+W DG L R GH
Sbjct: 252 CLRW-GGDGLLYSASQDRTIKVW--RAHDGV--LCRTLQGH 287
Score = 92 (37.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 24/103 (23%), Positives = 51/103 (49%)
Query: 520 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
++V+ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 378 QVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 437
Query: 580 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQ 620
+L++WDV + + H D + A+ SP+ +A+ D+
Sbjct: 438 TLKVWDVKAQKLSTDLPGHAD-EVYAVDWSPDGQRVASGGKDK 479
Score = 87 (35.7 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 35/142 (24%), Positives = 67/142 (47%)
Query: 220 THSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
T S+ G AV ++AFS G+ LASG+ + W+L + H + ++S+ +
Sbjct: 108 TSSLEGHSEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPHFTC-QGHRHWVLSISW 165
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF---YANG--RHILS 331
+ L S + I +W D + G ++ R +GHS + + +AN R++ S
Sbjct: 166 SPDGKKLASGCKNGQILLW--DPSTGK-QVGRALTGHSKWITALSWEPLHANPECRYVAS 222
Query: 332 AGQDRAFRLFSVIQDQQSRELS 353
+ +D + R++ + R L+
Sbjct: 223 SSKDGSVRVWDTTAGRCERTLT 244
Score = 73 (30.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 27/132 (20%), Positives = 58/132 (43%)
Query: 498 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA-LRMVRKFEGH 556
+ D +G L+ E S +V + L + +DD + L+ + + + GH
Sbjct: 314 VNAQDLRG-SLQELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 372
Query: 557 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLA 614
I FS D + + S+ D S+++WD + + ++ HV ++ ++ S + +L
Sbjct: 373 QALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHV-AAVYQIAWSADSRLLV 431
Query: 615 TAHVDQNGVYLW 626
+ D + +W
Sbjct: 432 SGSSDST-LKVW 442
Score = 66 (28.3 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 29/107 (27%), Positives = 41/107 (38%)
Query: 153 KVIVGSQEGSLQLWNISTKKK----LYEFKGW--GXXXXXXXXXPALDVVAVGCSDGKIH 206
K+ G + G + LW+ ST K+ L W P VA DG +
Sbjct: 171 KLASGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHANPECRYVASSSKDGSVR 230
Query: 207 VHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
V + T T H+ +VT L + DG LL S + I +W
Sbjct: 231 VWDTTAGRCERTLTGHAQ--SVTCLRWGGDG--LLYSASQDRTIKVW 273
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 129 (50.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 43/178 (24%), Positives = 79/178 (44%)
Query: 167 NISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE-ELVTFTHSMRG 225
N+ T K + KG+ +++ GCSD I V++ + E V G
Sbjct: 447 NLETIKLIETIKGYHVTSHLCICD---NLLFTGCSDNSIRVYDYKSQNMECVQTLKGHEG 503
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
V ++ ++ L SG+S I +W+L+K R + E HD + ++ N+ L S
Sbjct: 504 PVESICYNDQ---YLFSGSSDHSIKVWDLKKLRCIFTL-EGHDKPVHTV--LLNDKYLFS 557
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S+D +IK+W T + L + LCI +G+++ S D+ +++ +
Sbjct: 558 GSSDKTIKVWDLKTLECKYTLESH--ARAVKTLCI----SGQYLFSGSNDKTIKVWDL 609
Score = 127 (49.8 bits), Expect = 0.00030, P = 0.00030
Identities = 56/235 (23%), Positives = 99/235 (42%)
Query: 65 YRD-YTFAAYGNH-IAV--VKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAF 120
Y D Y F+ +H I V +K+ + T H V+ +LL +++ S D + +W
Sbjct: 510 YNDQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVHTVLLNDKYLFSGSSDKTIKVWDL 569
Query: 121 KGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW 180
K +E H + CI YL GS + ++++W++ T + Y KG
Sbjct: 570 KTLECKYTLESHARA---VKTLCIS--GQYL---FSGSNDKTIKVWDLKTFRCNYTLKGH 621
Query: 181 GXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLL 240
++ + G D I V N++ E T +RG + LL
Sbjct: 622 TKWVTTICIL-GTNLYS-GSYDKTIRVWNLKSLECSAT----LRGHDRWVEHMVICDKLL 675
Query: 241 ASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+ + I IW+LE R + + E H+ + L + ++ ++S S D SI++W
Sbjct: 676 FTASDDNTIKIWDLETLRCNTTL-EGHNATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 125 (49.1 bits), Expect = 0.00050, P = 0.00050
Identities = 47/208 (22%), Positives = 92/208 (44%)
Query: 137 DKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVV 196
DK T +++ D YL GS + ++++W++ T + Y + +
Sbjct: 542 DKPVHTVLLN-DKYL---FSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCISG--QYL 595
Query: 197 AVGCSDGKIHVHNVRYDEELVTFTHSMRGA---VTALAFSSDGQPLLASGASSGVISIWN 253
G +D I V +D + ++++G VT + L SG+ I +WN
Sbjct: 596 FSGSNDKTIKV----WDLKTFRCNYTLKGHTKWVTTICILGTN---LYSGSYDKTIRVWN 648
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
L+ + +R HD + H + +L +AS DN+IK+W +T + L GH
Sbjct: 649 LKSLECSATLR-GHDRWVE--HMVICDKLLFTASDDNTIKIWDLETLRCNTTL----EGH 701
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLF 341
+A C+ + + + ++S D++ R++
Sbjct: 702 NATVQCLAVWEDKKCVISCSHDQSIRVW 729
Score = 118 (46.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 37/121 (30%), Positives = 54/121 (44%)
Query: 468 RSNYAHNGEV--VGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHR 525
R NY G V C T + S Y I+VW+ K + + G + V H
Sbjct: 613 RCNYTLKGHTKWVTTIC-ILGTNLYSGSYDKTIRVWNLKSLECSATLR-GHD--RWVEHM 668
Query: 526 V--NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
V + LL T +DD I+++D+ LR EGH + ED K ++S D S+R+
Sbjct: 669 VICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQCLAVWEDKKCVISCSHDQSIRV 728
Query: 584 W 584
W
Sbjct: 729 W 729
Score = 62 (26.9 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 36/152 (23%), Positives = 69/152 (45%)
Query: 484 STNTLMISAGY--HGD----IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LATVADD 536
+ TL IS Y G IKVWD K + + + + + G L + + D
Sbjct: 584 AVKTLCISGQYLFSGSNDKTIKVWDLK--TFRCNYTLKGHTKWVTTICILGTNLYSGSYD 641
Query: 537 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIH 596
IR++++ +L GH DR + D K L ++ D +++IWD+ R +
Sbjct: 642 KTIRVWNLKSLECSATLRGH-DRWVEHMVICD-KLLFTASDDNTIKIWDLETLRCNTTLE 699
Query: 597 V-DVSITALSLSPNMD-VLATAHVDQNGVYLW 626
+ ++ L++ + V++ +H DQ+ + +W
Sbjct: 700 GHNATVQCLAVWEDKKCVISCSH-DQS-IRVW 729
Score = 42 (19.8 bits), Expect = 0.00091, Sum P(2) = 0.00090
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 862 ETVRCHTKLQDKARKLLEVQS-AVWQKIDKMFQSARCVVS 900
ET+RC+T L+ VQ AVW+ DK +CV+S
Sbjct: 690 ETLRCNTTLEGHNAT---VQCLAVWE--DK-----KCVIS 719
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 123 (48.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 34/146 (23%), Positives = 68/146 (46%)
Query: 485 TNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 543
T T +I G ++ +D + GR++ + + I + N +LA D +RL D
Sbjct: 155 TKTEIIGGSVDGTVRTFDMRIGREMSDNLGQPVNCISIS-NDGNCVLAGCLDS-TLRLLD 212
Query: 544 VVALRMVRKFEGHTDRI--TDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVS 600
+++ ++GH + TD C + ++ DG + WD++ A+ + D+
Sbjct: 213 RTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLV 272
Query: 601 ITALSLSPNMDVLATAHVDQNGVYLW 626
+T++S P D + T+ VD + +W
Sbjct: 273 VTSVSYHPKEDCMLTSSVDGT-IRVW 297
Score = 119 (46.9 bits), Expect = 0.00053, P = 0.00053
Identities = 28/114 (24%), Positives = 52/114 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNGLLA 531
H G V+ + ++ G I++W+ +G +K+ G + + N
Sbjct: 17 HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFC 76
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ D + +DV R++RKF GH + F++ ++S+G D SLR+WD
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 111 (44.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 31/117 (26%), Positives = 52/117 (44%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
GAV A F+ DG L G I +WN + L + +H + +H ++
Sbjct: 19 GAVLAARFNGDGNYALTCGKDR-TIRLWNPHRGILIKTYK-SHGREVRDVHVTSDNAKFC 76
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
S D + W D + G R++R GH ++F + ++SAG DR+ R++
Sbjct: 77 SCGGDRQVYYW--DVSTG--RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVW 129
Score = 103 (41.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 34/145 (23%), Positives = 68/145 (46%)
Query: 442 GTAGGWIERFNLQSGISRGSYLDMSERS-NYAHNGEVVGVAC-DSTNTLMISAGYHGDIK 499
G+ G + F+++ G L + +++G V C DST L+ G++
Sbjct: 162 GSVDGTVRTFDMRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTT--GEL- 218
Query: 500 VWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDR 559
+ +KG KS ++ C L H + G ++D ++ +D+V +++ KF H
Sbjct: 219 LQVYKGHISKS-FKTDCCLTNSDAHVIGG-----SEDGLVFFWDLVDAKVLSKFRAHDLV 272
Query: 560 ITDFCFSEDGKWLLSSGMDGSLRIW 584
+T + +L+S +DG++R+W
Sbjct: 273 VTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 103 (41.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 35/160 (21%), Positives = 71/160 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSL---VKIVYHRVNGL 529
H+GEV V + ++++++SAG+ ++VWD + ++ + L + +V + +
Sbjct: 101 HDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTEII 160
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDR-ITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
+V D +R FD +R+ R+ + + + S DG +L+ +D +LR+ D
Sbjct: 161 GGSV--DGTVRTFD---MRIGREMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTT 215
Query: 589 AR--QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
Q+ H+ S N D + V+ W
Sbjct: 216 GELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFW 255
Score = 65 (27.9 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
GH L RF +G + L+ G+DR RL++
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
Score = 48 (22.0 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
I + H+ A+++ F + ++ D +I++W
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLW 45
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 187 (70.9 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 73/263 (27%), Positives = 130/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ L ++ GS +
Sbjct: 84 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDSRL--LVSGSDD 135
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W +ST K L KG P +++ G D + + +VR + L T
Sbjct: 136 KTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLP 195
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 196 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 250
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S
Sbjct: 251 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSG 304
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ QS+E+ Q+
Sbjct: 305 SEDNMVYIWNL----QSKEVVQK 323
Score = 153 (58.9 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 59/249 (23%), Positives = 109/249 (43%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++S +KVW+
Sbjct: 84 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWEL 143
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 144 STGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSA 203
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 204 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 262
Query: 621 NGVYLW---VNRCM--FSGDSNID-------SYASGKEIVSVKMPSVSSVEGCQDENSSQ 668
N + LW +C+ ++G N S GK IVS ++ + Q + Q
Sbjct: 263 NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQ 322
Query: 669 PDVHRTDRV 677
TD V
Sbjct: 323 KLQGHTDTV 331
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 125 (49.1 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 373 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 431
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 432 VSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 115 (45.5 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVI 249
P +A G D + ++ E FT R V ++++S DG+ L ASG +G I
Sbjct: 126 PTGKYLASGSGDTTVRFWDL--STETPHFTCKGHRHWVLSISWSPDGKKL-ASGCKNGQI 182
Query: 250 SIWNLEKRRLQSVIREAHDNAIISL-----HFFANEPVLMSASADNSIKMWIFDTTDGDP 304
+W+ H I L H + S+S D S+++W DTT G
Sbjct: 183 LLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW--DTTAG-- 238
Query: 305 RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 239 RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 274
Score = 104 (41.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 41/163 (25%), Positives = 74/163 (45%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + +++ W++ST+ + KG P +A GC +G+I + + ++
Sbjct: 134 GSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWDPSTGTQV 193
Query: 217 V-TFT-HSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNA 270
T T HS +T L++ P +AS + G + +W+ R + ++ H +
Sbjct: 194 GRTLTGHSKW--ITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILT-GHTQS 250
Query: 271 IISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
+ L + + +L SAS D +IK+W DG L R GH
Sbjct: 251 VTCLRW-GGDGLLYSASQDRTIKVW--RAHDGV--LCRTLQGH 288
Score = 90 (36.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 23/103 (22%), Positives = 51/103 (49%)
Query: 520 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 379 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 438
Query: 580 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQ 620
+L++WDV + + H D + A+ SP+ +A+ D+
Sbjct: 439 TLKVWDVKAQKLTTDLPGHAD-EVYAVDWSPDGQRVASGGKDK 480
Score = 75 (31.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 28/132 (21%), Positives = 58/132 (43%)
Query: 498 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA-LRMVRKFEGH 556
+ D +G LK E S +V + L + +DD + L+ + + + GH
Sbjct: 315 VNAQDLQG-SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 373
Query: 557 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLA 614
I FS D + + S+ D S+++WD + + ++ HV ++ ++ S + +L
Sbjct: 374 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV-AAVYQIAWSADSRLLV 432
Query: 615 TAHVDQNGVYLW 626
+ D + +W
Sbjct: 433 SGSSDST-LKVW 443
Score = 67 (28.6 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 28/107 (26%), Positives = 41/107 (38%)
Query: 153 KVIVGSQEGSLQLWNISTK----KKLYEFKGW--GXXXXXXXXXPALDVVAVGCSDGKIH 206
K+ G + G + LW+ ST + L W G P VA DG +
Sbjct: 172 KLASGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 231
Query: 207 VHNVRYDE-ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
V + E + H+ +VT L + DG LL S + I +W
Sbjct: 232 VWDTTAGRCERILTGHTQ--SVTCLRWGGDG--LLYSASQDRTIKVW 274
Score = 65 (27.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 113 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--KGHRHWVLSISWSP 168
Query: 325 NGRHILS 331
+G+ + S
Sbjct: 169 DGKKLAS 175
Score = 44 (20.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
GHS + + F G+++ S D R + +
Sbjct: 114 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 145
>TAIR|locus:2089855 [details] [associations]
symbol:AT3G21540 "AT3G21540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686 GO:GO:0005730
EMBL:AB019232 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD IPI:IPI00523426 RefSeq:NP_188791.3 UniGene:At.28071
ProteinModelPortal:Q9LVF2 SMR:Q9LVF2 STRING:Q9LVF2 PRIDE:Q9LVF2
EnsemblPlants:AT3G21540.1 GeneID:821708 KEGG:ath:AT3G21540
TAIR:At3g21540 InParanoid:Q9LVF2 PhylomeDB:Q9LVF2
ProtClustDB:CLSN2680855 ArrayExpress:Q9LVF2 Genevestigator:Q9LVF2
Uniprot:Q9LVF2
Length = 955
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/169 (28%), Positives = 86/169 (50%)
Query: 484 STNTLMISAGY-HGDIKVWDF-KGR-DLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIR 540
S+ + +++ GY G I++WD KG ++ G ++ + Y++V +LA+ + D I
Sbjct: 73 SSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKG-AVTALRYNKVGSMLASGSKDNDII 131
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR--QIDAIHVD 598
L+DVV + + GH D++TD F + GK L+SS D LR+WD+ QI + H
Sbjct: 132 LWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHS 191
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEI 647
+ ++ P + T DQ + V +S + ++ S ++ EI
Sbjct: 192 -EVWSVDTDPEERYVVTGSADQELRFYAVKE--YSSNGSLVSDSNANEI 237
Score = 137 (53.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 41/152 (26%), Positives = 74/152 (48%)
Query: 192 ALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISI 251
A +VAVG +DG I + + V F +S +GAVTAL ++ G +LASG+ I +
Sbjct: 75 ASSLVAVGYADGSIRIWDTEKGTCEVNF-NSHKGAVTALRYNKVGS-MLASGSKDNDIIL 132
Query: 252 WNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 311
W++ +R H + + L F L+S+S D +++W +T ++ S
Sbjct: 133 WDVVGESGLFRLR-GHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQ----HCMQIVS 187
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
GH + + R++++ D+ R ++V
Sbjct: 188 GHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
Score = 132 (51.5 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 47/158 (29%), Positives = 77/158 (48%)
Query: 204 KIHVHNVRYDEELVTFT-HSMRG----AVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
K+ + +VR T T S RG AVT++A S+ L+A G + G I IW+ EK
Sbjct: 40 KVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASS--LVAVGYADGSIRIWDTEKGT 97
Query: 259 LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
+ V +H A+ +L + +L S S DN I +W D G+ L R R GH
Sbjct: 98 CE-VNFNSHKGAVTALRYNKVGSMLASGSKDNDIILW--DVV-GESGLFRLR-GHRDQVT 152
Query: 319 CIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
+ F G+ ++S+ +D+ R++ ++ Q ++ H
Sbjct: 153 DLVFLDGGKKLVSSSKDKFLRVWD-LETQHCMQIVSGH 189
Score = 110 (43.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRV 526
S Y H V+ + S L+++ ++K+W DF G KS + G S++ + + R
Sbjct: 577 SLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDF-GDCHKSIFAHGDSVMGVKFVRN 635
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
L ++ D +++ +D + EGH I S G +L++ D S+R WD
Sbjct: 636 THYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 96 (38.9 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 33/144 (22%), Positives = 62/144 (43%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYE--FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR 211
V VG +GS+++W+ T+K E F ++A G D I + +V
Sbjct: 79 VAVGYADGSIRIWD--TEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVV 136
Query: 212 YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAI 271
+ L R VT L F G+ L++S + +W+LE + ++ H + +
Sbjct: 137 GESGLFRL-RGHRDQVTDLVFLDGGKKLVSSSKDK-FLRVWDLETQHCMQIV-SGHHSEV 193
Query: 272 ISLHFFANEPVLMSASADNSIKMW 295
S+ E +++ SAD ++ +
Sbjct: 194 WSVDTDPEERYVVTGSADQELRFY 217
Score = 92 (37.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 34/149 (22%), Positives = 68/149 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKG---RDLKSRWEVGCSLVKIVYHRVNG 528
H +V V NTL++S H ++K+W+ G R + S + + CSL IV G
Sbjct: 405 HRSDVRSVTLSEDNTLLMSTS-HSEVKIWNPSTGSCLRTIDSGYGL-CSL--IVPQNKYG 460
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
++ T + V+ + D+ + V + + H I + ++ D ++ W+ +
Sbjct: 461 IVGTKSG--VLEIIDIGSATKVEEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQV 518
Query: 589 ARQIDAIHVDVSITAL-SLSPNMDVLATA 616
++ ++++ + S+ N DVLA A
Sbjct: 519 KQKSGKATKKLTVSNVKSMKMNDDVLAVA 547
Score = 75 (31.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 32/168 (19%), Positives = 72/168 (42%)
Query: 430 CTISACGN-FAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTL 488
C++ N + ++GT G +E ++ GS + E AH G + + ++
Sbjct: 450 CSLIVPQNKYGIVGTKSGVLEIIDI------GSATKVEEVK--AHGGTIWSITPIPNDSG 501
Query: 489 MISAGYHGDIKVWDF--KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL--------- 537
++ ++K W++ K + K+ ++ S VK + + L ++ D
Sbjct: 502 FVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLD 561
Query: 538 -VIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+++F + +L+ GH + S DG+ +++ D +L+IW
Sbjct: 562 STVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIW 609
Score = 49 (22.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 463 LDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWD 502
LD + +S +AH V+GV + S G +K WD
Sbjct: 611 LDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWD 652
Score = 45 (20.9 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 6/43 (13%), Positives = 24/43 (55%)
Query: 320 IRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRAR 362
+RF +G+ + + +F V+ + ++++ ++R + ++ +
Sbjct: 269 VRFNVSGKLLACQMAGKTIEIFRVLDEAEAKQKAKRRLRRKEK 311
Score = 45 (20.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/32 (28%), Positives = 16/32 (50%)
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+GH + SED L+S+ ++IW+
Sbjct: 403 QGHRSDVRSVTLSEDNTLLMSTS-HSEVKIWN 433
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 155 (59.6 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 51/203 (25%), Positives = 93/203 (45%)
Query: 150 YLNKVIVG-SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
Y ++++V SQ+G L +W+ T K++ P+ + VA G D ++
Sbjct: 65 YDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 209 NVRYDEELVTFTHSMRGAVTALA---FSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
N++ E V + + G L+ F DGQ + +SG ++ ++W++E + Q+
Sbjct: 125 NLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT--CALWDIETGQ-QTTTFT 181
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
H ++SL + +S + D S K+W D DG R F +GH + + F+ +
Sbjct: 182 GHSGDVMSLSLSPDLKTFVSGACDASSKLW--DIRDGMCRQ-SF-TGHISDINAVSFFPS 237
Query: 326 GRHILSAGQDRAFRLFSVIQDQQ 348
G + D RLF + DQ+
Sbjct: 238 GYAFATGSDDATCRLFDLRADQE 260
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 39/152 (25%), Positives = 70/152 (46%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
+ PD L + G+ + S +LW+I F G P+ A G D
Sbjct: 192 LSPD--LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDAT 249
Query: 205 IHVHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
+ ++R D+EL+ ++H ++ +T++AFS G+ LLA G S+W+ K V+
Sbjct: 250 CRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLA-GYDDFNCSVWDALKGGRAGVL 308
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +++W
Sbjct: 309 A-GHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 101 (40.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LA 531
H+G+V+ ++ +S K+WD + + + S + V +G A
Sbjct: 183 HSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA 242
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELLLYS-HDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GGRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLRIW 339
Score = 84 (34.6 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGYDSR-LLVSASQDGKLIIWDSYTTNKMHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF +G+ I S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
Score = 76 (31.8 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 508 LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSE 567
L S + C + + + + LL DD ++D + GH +R++ ++
Sbjct: 263 LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRAGVLAGHDNRVSCLGVTD 322
Query: 568 DGKWLLSSGMDGSLRIWD 585
DG + + D LRIW+
Sbjct: 323 DGMAVATGSWDSFLRIWN 340
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 154 (59.3 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 51/203 (25%), Positives = 92/203 (45%)
Query: 150 YLNKVIVG-SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
Y ++++V SQ+G L +W+ T K++ P+ + VA G D ++
Sbjct: 65 YDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 209 NVRYDEELVTFTHSMRGAVTALA---FSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
N++ E V + + G L+ F D Q + +SG ++ ++W++E + Q+
Sbjct: 125 NLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTT--CALWDIETAQ-QTTTFT 181
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
H ++SL + +S + D S K+W D DG R F +GH + + F+ N
Sbjct: 182 GHSGDVMSLSLSPDMRTFVSGACDASSKLW--DIRDGMCRQ-SF-TGHVSDINAVSFFPN 237
Query: 326 GRHILSAGQDRAFRLFSVIQDQQ 348
G + D RLF + DQ+
Sbjct: 238 GYAFATGSDDATCRLFDLRADQE 260
Score = 124 (48.7 bits), Expect = 0.00019, P = 0.00019
Identities = 42/185 (22%), Positives = 80/185 (43%)
Query: 112 DGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTK 171
D +W + ++ GH D + + + PD + + G+ + S +LW+I
Sbjct: 163 DTTCALWDIETAQQTTTFTGHS--GDVMSLS--LSPD--MRTFVSGACDASSKLWDIRDG 216
Query: 172 KKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTH-SMRGAVTAL 230
F G P A G D + ++R D+EL+ ++H ++ +T++
Sbjct: 217 MCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDLRADQELLLYSHDNIICGITSV 276
Query: 231 AFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADN 290
AFS G+ LLA G ++W+ K V+ HDN + L + + + S D+
Sbjct: 277 AFSKSGRLLLA-GYDDFNCNVWDTLKGDRAGVLA-GHDNRVSCLGVTDDGMAVATGSWDS 334
Query: 291 SIKMW 295
+++W
Sbjct: 335 FLRIW 339
Score = 108 (43.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 38/160 (23%), Positives = 72/160 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LA 531
H+G+V+ ++ +S K+WD + + + S + V NG A
Sbjct: 183 HSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFA 242
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELLLYS-HDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GDRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLRIW 339
Score = 77 (32.2 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 508 LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSE 567
L S + C + + + + LL DD ++D + GH +R++ ++
Sbjct: 263 LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNRVSCLGVTD 322
Query: 568 DGKWLLSSGMDGSLRIWD 585
DG + + D LRIW+
Sbjct: 323 DGMAVATGSWDSFLRIWN 340
Score = 55 (24.4 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 23/100 (23%), Positives = 48/100 (48%)
Query: 245 SSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDP 304
+S + S+ ++ R +++ H I ++H+ + +L+SAS D + +W TT+
Sbjct: 34 TSNMDSVGRIQMRTRRTL--RGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTN-KM 90
Query: 305 RLLRFRSGHSAPPLCIRFYA-NGRHILSAGQDRAFRLFSV 343
+ RS S C YA +G ++ G D ++++
Sbjct: 91 HAIPLRS--SWVMTCA--YAPSGNYVACGGLDNICSIYNL 126
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 192 (72.6 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 66/266 (24%), Positives = 118/266 (44%)
Query: 81 KRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGN----MFIWAFKGIEENLAPVGHVKLD 136
KRA+++ + HSA VN L + G + + G + +WA L+ GH
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKI-GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 62
Query: 137 DKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVV 196
D T L V G+ G+++LW++ K + G P +
Sbjct: 63 DSVT----FDASEVL--VAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 197 AVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
A G D + + ++R + T+ RG V L F+ DG+ + SG ++ +W+L
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRG-VNVLRFTPDGR-WVVSGGEDNIVKVWDLTA 174
Query: 257 RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAP 316
+L + + +H+ I SL F +E +L + SAD ++K W +T + L+ +A
Sbjct: 175 GKLLTEFK-SHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFE----LIGSGGPETAG 229
Query: 317 PLCIRFYANGRHILSAGQDRAFRLFS 342
C+ F +G+ +L G + ++FS
Sbjct: 230 VRCLSFNPDGKTVL-CGLQESLKIFS 254
Score = 165 (63.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 36/160 (22%), Positives = 78/160 (48%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVN 527
S Y H+ + V D++ L+ + G IK+WD + + +++ + + + +H
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 528 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
A+ + D ++++D+ + ++GHT + F+ DG+W++S G D +++WD+
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLT 173
Query: 588 LARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + + I +L P+ +LAT D+ V W
Sbjct: 174 AGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRT-VKFW 212
Score = 132 (51.5 bits), Expect = 0.00010, P = 0.00010
Identities = 36/150 (24%), Positives = 75/150 (50%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVT-FTHSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
V+ G D K+++ + +++ + HS + ++ F + + L+A+GA+SG I +W+
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHS--SGIDSVTFDAS-EVLVAAGAASGTIKLWD 87
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE+ ++ + H + IS+ F S S D ++K+W G + GH
Sbjct: 88 LEEAKIVRTLT-GHRSNCISVDFHPFGEFFASGSLDTNLKIWDI-RKKG---CIHTYKGH 142
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ +RF +GR ++S G+D +++ +
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 143 (55.4 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 40/125 (32%), Positives = 66/125 (52%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + +AT + D +RL+DV+ VR F GH I FS +GK+L S DG +
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL 650
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW-VNRCMFSGDSNID 639
+WD+ I + H +I AL S + +++A+ +D N V LW V R + +++
Sbjct: 651 LWDIGHGLMIAELKGHTG-TIYALKFSRDGEIIASGSID-NTVRLWDVMRAIDDVETDDF 708
Query: 640 SYASG 644
+ A+G
Sbjct: 709 TAATG 713
Score = 143 (55.4 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 47/193 (24%), Positives = 88/193 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 513 YLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPF-----GYYF---VSGGHDRV 564
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + VA G SD + + +V + FT
Sbjct: 565 ARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFT-G 623
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +LAFS +G+ LASG++ G + +W++ + + ++ H I +L F + +
Sbjct: 624 HKGPIHSLAFSPNGK-FLASGSTDGRVLLWDIGHGLMIAELK-GHTGTIYALKFSRDGEI 681
Query: 283 LMSASADNSIKMW 295
+ S S DN++++W
Sbjct: 682 IASGSIDNTVRLW 694
Score = 124 (48.7 bits), Expect = 0.00066, P = 0.00066
Identities = 46/199 (23%), Positives = 80/199 (40%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PD N ++ S++G+++LW++ T L +KG P G D
Sbjct: 509 PDR--NYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVAR 566
Query: 207 VHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA 266
+ + + L F + VT F + +A+G+S + +W++ +
Sbjct: 567 LWATDHYQPLRIFAGHLAD-VTCTRFHPNSN-YVATGSSDRTVRLWDVLNGNCVRIFT-G 623
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H I SL F N L S S D + +W D G ++ GH+ ++F +G
Sbjct: 624 HKGPIHSLAFSPNGKFLASGSTDGRVLLW--DIGHG--LMIAELKGHTGTIYALKFSRDG 679
Query: 327 RHILSAGQDRAFRLFSVIQ 345
I S D RL+ V++
Sbjct: 680 EIIASGSIDNTVRLWDVMR 698
Score = 120 (47.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 35/124 (28%), Positives = 55/124 (44%)
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
H G V ++FS D LL+S + G I +W+L+ V + H+ + F
Sbjct: 496 HGHSGPVYGVSFSPDRNYLLSS-SEDGTIRLWSLQTFTCL-VGYKGHNYPVWDTQFSPFG 553
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
+S D ++W D P LR +GH A C RF+ N ++ + DR RL
Sbjct: 554 YYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRL 609
Query: 341 FSVI 344
+ V+
Sbjct: 610 WDVL 613
Score = 100 (40.3 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 31/126 (24%), Positives = 65/126 (51%)
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
TF ++ +G +TA+ F+ D L+A G + + +W++ ++L+ V + A D
Sbjct: 421 TFLNAYQG-LTAVDFTDDSS-LIAGGFADSTVRVWSVTPKKLRKV-KSAAD--------- 468
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRA 337
N L+ +D+ ++ + + T + ++L GHS P + F + ++LS+ +D
Sbjct: 469 LN---LIDKESDDVLERIMDEKTSSESKILH---GHSGPVYGVSFSPDRNYLLSSSEDGT 522
Query: 338 FRLFSV 343
RL+S+
Sbjct: 523 IRLWSL 528
Score = 99 (39.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 41/134 (30%), Positives = 65/134 (48%)
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW-- 584
N LL++ ++D IRL+ + + ++GH + D FS G + +S G D R+W
Sbjct: 512 NYLLSS-SEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWAT 570
Query: 585 DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW--VN-RCM--FSGDSN-I 638
D +I A H+ +T PN + +AT D+ V LW +N C+ F+G I
Sbjct: 571 DHYQPLRIFAGHL-ADVTCTRFHPNSNYVATGSSDRT-VRLWDVLNGNCVRIFTGHKGPI 628
Query: 639 DSYA---SGKEIVS 649
S A +GK + S
Sbjct: 629 HSLAFSPNGKFLAS 642
Score = 97 (39.2 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 29/104 (27%), Positives = 49/104 (47%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK +S I H + + F + L+S+S D +I++W T L+ ++ GH+
Sbjct: 486 EKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTC---LVGYK-GHN 541
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 542 YPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 584
Score = 57 (25.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL---KSRWEVGCSLVKIVYHRVNGL 529
H G + +A + S G + +WD G L + + G ++ + + R +
Sbjct: 624 HKGPIHSLAFSPNGKFLASGSTDGRVLLWDI-GHGLMIAELKGHTG-TIYALKFSRDGEI 681
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRIT 561
+A+ + D +RL+DV +R + E TD T
Sbjct: 682 IASGSIDNTVRLWDV--MRAIDDVE--TDDFT 709
>SGD|S000004119 [details] [associations]
symbol:DIP2 "Nucleolar protein" species:4932 "Saccharomyces
cerevisiae" [GO:0030515 "snoRNA binding" evidence=IPI] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000480 "endonucleolytic cleavage in 5'-ETS of tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0032040 "small-subunit processome" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000004119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006945 EMBL:X91258
EMBL:U53881 EMBL:X89514 EMBL:U53877 GO:GO:0032040 GO:GO:0000447
GO:GO:0000472 GO:GO:0000480 InterPro:IPR007148 Pfam:PF04003
GO:GO:0034388 EMBL:Z73301 EMBL:Z73302 PIR:S59317 RefSeq:NP_013230.1
ProteinModelPortal:Q12220 SMR:Q12220 DIP:DIP-6494N IntAct:Q12220
MINT:MINT-620162 STRING:Q12220 PaxDb:Q12220 PeptideAtlas:Q12220
EnsemblFungi:YLR129W GeneID:850820 KEGG:sce:YLR129W CYGD:YLR129w
GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD OrthoDB:EOG4N07P3 NextBio:967067 Genevestigator:Q12220
GermOnline:YLR129W Uniprot:Q12220
Length = 943
Score = 131 (51.2 bits), Expect = 0.00015, P = 0.00015
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 486 NTLMISAGY-HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LATVADDLVIRLFD 543
+T +++ GY G IKVWD + + + + + ++ G L + + D I ++D
Sbjct: 90 DTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWD 149
Query: 544 VVALRMVRKFEGHTDRITDF-CFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSIT 602
+V + K H D IT F C ED WL+S+ DG +++WD+ + I+ H+ +
Sbjct: 150 LVGEVGLYKLRSHKDSITGFWCQGED--WLISTSKDGMIKLWDLKTHQCIET-HIAHTGE 206
Query: 603 ALSLSPNMDVLATAHVDQNGVYLW 626
L+ D+L T D V +W
Sbjct: 207 CWGLAVKDDLLITTGTDSQ-VKIW 229
Score = 125 (49.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 43/207 (20%), Positives = 94/207 (45%)
Query: 152 NKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR 211
NK++ + GSL++WNI T K + F+ G L +V +G +G++ + ++
Sbjct: 403 NKLLATASNGSLKIWNIKTHKCIRTFE-CGYALTCKFLPGGL-LVILGTRNGELQLFDLA 460
Query: 212 YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE---------KRRLQSV 262
L T + A+ +L +SDG+ L+ +G++ + W+ + K + V
Sbjct: 461 SSSLLDTIEDAHDAAIWSLDLTSDGKRLV-TGSADKTVKFWDFKVENSLVPGTKNKFLPV 519
Query: 263 IREAHDNA------IISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAP 316
++ HD I+ + ++ L + DN++K++ D+ + GH P
Sbjct: 520 LKLHHDTTLELTDDILCVRVSPDDRYLAISLLDNTVKVFFLDSM----KFYLSLYGHKLP 575
Query: 317 PLCIRFYANGRHILSAGQDRAFRLFSV 343
L I + + I+++ D+ +++ +
Sbjct: 576 VLSIDISFDSKMIITSSADKNIKIWGL 602
Score = 108 (43.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 43/208 (20%), Positives = 90/208 (43%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRV 526
S Y H V+ + + ++I++ +IK+W DF G KS + S++ + +
Sbjct: 568 SLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDF-GDCHKSLFAHQDSIMNVKFLPQ 626
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD- 585
+ + + D V++ +D ++K H + + DG +++SS D S+RIW+
Sbjct: 627 SHNFFSCSKDAVVKYWDGEKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWEE 686
Query: 586 ----VILA----RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSN 637
V L ++++ + D +T+L N D A GV +
Sbjct: 687 TEDQVFLEEEKEKELEEQYEDTLLTSLE-EGNGDDAFKADASGEGVE---DEASGVHKQT 742
Query: 638 IDSYASGKEIVSVKMPSVSSVEGCQDEN 665
++S +G+ ++ ++ +EG + N
Sbjct: 743 LESLKAGERLMEALDLGIAEIEGLEAYN 770
Score = 100 (40.3 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 36/154 (23%), Positives = 68/154 (44%)
Query: 146 HPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKI 205
H DT L + VG +G +++W++ +K L F G + G D I
Sbjct: 88 HKDTDL--LAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNI 145
Query: 206 HVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIR 264
V ++ + L S + ++T F G+ L S + G+I +W+L+ + +++ I
Sbjct: 146 IVWDLVGEVGLYKL-RSHKDSITG--FWCQGEDWLISTSKDGMIKLWDLKTHQCIETHI- 201
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
AH L + +L++ D+ +K+W D
Sbjct: 202 -AHTGECWGLA--VKDDLLITTGTDSQVKIWKLD 232
Score = 92 (37.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 28/112 (25%), Positives = 53/112 (47%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV-KIVYHRVNGLLATVA 534
+V + N L+ +A +G +K+W+ K +E G +L K + + +L T
Sbjct: 393 DVRSIDISDDNKLLATAS-NGSLKIWNIKTHKCIRTFECGYALTCKFLPGGLLVILGTRN 451
Query: 535 DDLVIRLFDVVALRMVRKFE-GHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+L +LFD+ + ++ E H I + DGK L++ D +++ WD
Sbjct: 452 GEL--QLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSADKTVKFWD 501
Score = 89 (36.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 33/121 (27%), Positives = 56/121 (46%)
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
LLA G + GVI +W+L + + H AI L F L+S S D++I +W D
Sbjct: 93 LLAVGYADGVIKVWDLMSKTVLLNFN-GHKAAITLLQFDGTGTRLISGSKDSNIIVW--D 149
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYANGRH-ILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
G+ L + RS + F+ G ++S +D +L+ D ++ + + H+
Sbjct: 150 LV-GEVGLYKLRSHKDS---ITGFWCQGEDWLISTSKDGMIKLW----DLKTHQCIETHI 201
Query: 358 A 358
A
Sbjct: 202 A 202
Score = 70 (29.7 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 21/75 (28%), Positives = 32/75 (42%)
Query: 430 CTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLM 489
C G +LGT G ++ F+L S S LD E AH+ + + S +
Sbjct: 436 CKFLPGGLLVILGTRNGELQLFDLASS----SLLDTIED---AHDAAIWSLDLTSDGKRL 488
Query: 490 ISAGYHGDIKVWDFK 504
++ +K WDFK
Sbjct: 489 VTGSADKTVKFWDFK 503
Score = 59 (25.8 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
Identities = 28/122 (22%), Positives = 50/122 (40%)
Query: 56 PKKIRALASYRDYTFAAYGNHIAVVK-----RAHQVATWSRHSAKVNLLLL--FGEHILS 108
P + L +++D A G V+K + ++ H A + LL G ++S
Sbjct: 79 PAECTYLEAHKDTDLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLIS 138
Query: 109 IDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNI 168
D N+ +W G E L + K D T D ++ S++G ++LW++
Sbjct: 139 GSKDSNIIVWDLVG-EVGLYKLRSHK--DSITGFWCQGEDWLIST----SKDGMIKLWDL 191
Query: 169 ST 170
T
Sbjct: 192 KT 193
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
D +++F + +++ GH + S D K +++S D +++IW
Sbjct: 552 DNTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIW 600
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 125 (49.1 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H + V + ++ SA + IK+WD + G+ L S R V ++ +I + + LL
Sbjct: 371 HQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVA-AVYQIAWSADSRLL 429
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ + D ++++DV A ++ GH D + +S DG+ + S G D LRIW
Sbjct: 430 VSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 113 (44.8 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 43/157 (27%), Positives = 70/157 (44%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVI 249
P +A G D + ++ E FT R V ++++S DG+ L ASG +G +
Sbjct: 124 PTGKYLASGSGDTTVRFWDL--STETPHFTCKGHRHWVLSISWSPDGKKL-ASGCKNGQV 180
Query: 250 SIWNLEKRRLQSVIREAHDNAIISL-----HFFANEPVLMSASADNSIKMWIFDTTDGDP 304
+W+ H I L H + S+S D S+++W DTT G
Sbjct: 181 LLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVRVW--DTTAG-- 236
Query: 305 RLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
R R +GH+ C+R+ +G + SA QDR +++
Sbjct: 237 RCERILTGHTQSVTCLRWGGDGL-LYSASQDRTIKVW 272
Score = 101 (40.6 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 40/163 (24%), Positives = 74/163 (45%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + +++ W++ST+ + KG P +A GC +G++ + + ++
Sbjct: 132 GSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQVLLWDPSTGLQV 191
Query: 217 V-TFT-HSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNA 270
T T HS +T L++ P +AS + G + +W+ R + ++ H +
Sbjct: 192 GRTLTGHSKW--ITGLSWEPLHMNPECRYVASSSKDGSVRVWDTTAGRCERILT-GHTQS 248
Query: 271 IISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
+ L + + +L SAS D +IK+W DG L R GH
Sbjct: 249 VTCLRW-GGDGLLYSASQDRTIKVW--RAHDGV--LCRTLQGH 286
Score = 91 (37.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 25/104 (24%), Positives = 52/104 (50%)
Query: 520 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
++++ + ++A+ + D I+L+D + + GH + +S D + L+S D
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436
Query: 580 SLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQ 620
+L++WDV LA + H D + A+ SP+ +A+ D+
Sbjct: 437 TLKVWDVKAQKLATDLPG-HAD-EVYAVDWSPDGQRVASGGKDK 478
Score = 75 (31.5 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 28/132 (21%), Positives = 58/132 (43%)
Query: 498 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA-LRMVRKFEGH 556
+ D +G LK E S +V + L + +DD + L+ + + + GH
Sbjct: 313 VNAQDLQG-SLKELKERASSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLARMTGH 371
Query: 557 TDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLA 614
I FS D + + S+ D S+++WD + + ++ HV ++ ++ S + +L
Sbjct: 372 QALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHV-AAVYQIAWSADSRLLV 430
Query: 615 TAHVDQNGVYLW 626
+ D + +W
Sbjct: 431 SGSSDST-LKVW 441
Score = 66 (28.3 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 28/107 (26%), Positives = 41/107 (38%)
Query: 153 KVIVGSQEGSLQLWNISTK----KKLYEFKGW--GXXXXXXXXXPALDVVAVGCSDGKIH 206
K+ G + G + LW+ ST + L W G P VA DG +
Sbjct: 170 KLASGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMNPECRYVASSSKDGSVR 229
Query: 207 VHNVRYDE-ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
V + E + H+ +VT L + DG LL S + I +W
Sbjct: 230 VWDTTAGRCERILTGHTQ--SVTCLRWGGDG--LLYSASQDRTIKVW 272
Score = 65 (27.9 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 19/67 (28%), Positives = 29/67 (43%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H A+IS+ F L S S D +++ W D + P GH L I +
Sbjct: 111 EGHSEAVISVAFSPTGKYLASGSGDTTVRFW--DLSTETPHFTC--KGHRHWVLSISWSP 166
Query: 325 NGRHILS 331
+G+ + S
Sbjct: 167 DGKKLAS 173
Score = 44 (20.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 8/32 (25%), Positives = 15/32 (46%)
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
GHS + + F G+++ S D R + +
Sbjct: 112 GHSEAVISVAFSPTGKYLASGSGDTTVRFWDL 143
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 168 (64.2 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 53/165 (32%), Positives = 83/165 (50%)
Query: 491 SAGYHGDIKVWDFKGRDLKSRWEVGCSL-VKIV-YHRVNGLLATVADDLVIRLFDVVALR 548
SA + ++W F R R G L V V +H + LAT + D +RL+
Sbjct: 401 SASHDRTARLWSFD-RTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGN 459
Query: 549 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSITALS 605
VR F GH + FS +GK+L S+G D L++WD+ L +++ H D +IT+L+
Sbjct: 460 SVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG-HTD-NITSLT 517
Query: 606 LSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 650
SP+ ++A+A +D N V +W R + N + S E+V V
Sbjct: 518 FSPDSSLIASASMD-NSVRVWDIRNTYC---NAPADGSSSELVGV 558
Score = 141 (54.7 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 40/138 (28%), Positives = 65/138 (47%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + + +LW+ L + G P + +A G +D + + + + +
Sbjct: 403 SHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVR 462
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
FT RG V ALAFS +G+ LAS + +W+L L +R DN I SL F
Sbjct: 463 LFT-GHRGPVLALAFSPNGK-YLASAGEDQRLKLWDLASGTLYKELRGHTDN-ITSLTFS 519
Query: 278 ANEPVLMSASADNSIKMW 295
+ ++ SAS DNS+++W
Sbjct: 520 PDSSLIASASMDNSVRVW 537
Score = 117 (46.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 35/126 (27%), Positives = 55/126 (43%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V + F SD LL+ I W+L + +V+ + H + L
Sbjct: 343 GPVYSTRFLSDSSGLLSCSEDMS-IRYWDL-RSFTNTVLYQGHAYPVWDLDISPCSLYFA 400
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 344
SAS D + ++W FD T P LR +GH C++F+ N ++ + D+ RL+S
Sbjct: 401 SASHDRTARLWSFDRTY--P--LRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQ 456
Query: 345 QDQQSR 350
Q R
Sbjct: 457 QGNSVR 462
Score = 69 (29.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
Identities = 24/110 (21%), Positives = 49/110 (44%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
S LLA+G + + +W+L ++L+S E H + + + +L ++
Sbjct: 277 SPNSKLLAAGFDNSCVKLWSLRSKKLKS---EPHLVDVSRIRLACD--ILDEEEEED--- 328
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
D+ + ++LR GH P RF ++ +LS +D + R + +
Sbjct: 329 ----DSAGTEMKILR---GHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDL 371
Score = 64 (27.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLA 531
H G V+ +A + SAG +K+WD L ++ + + + L+A
Sbjct: 467 HRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIA 526
Query: 532 TVADDLVIRLFDV 544
+ + D +R++D+
Sbjct: 527 SASMDNSVRVWDI 539
>ZFIN|ZDB-GENE-041114-104 [details] [associations]
symbol:tbl3 "transducin (beta)-like 3" species:7955
"Danio rerio" [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0010564 "regulation of cell
cycle process" evidence=IMP] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0048538 "thymus development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-041114-104 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0048538 GO:GO:0006364 GO:GO:0032040
GO:GO:0010564 GO:GO:0030098 GeneTree:ENSGT00690000102183
EMBL:CABZ01040209 EMBL:CABZ01040210 EMBL:CABZ01079585
EMBL:CABZ01079586 IPI:IPI00489593 Ensembl:ENSDART00000074174
ArrayExpress:F1QYF0 Bgee:F1QYF0 Uniprot:F1QYF0
Length = 898
Score = 145 (56.1 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 37/117 (31%), Positives = 61/117 (52%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR-VNGL- 529
H+ V ++ D T+TL+ + G G IK+WD + + +V +V +H ++ L
Sbjct: 105 HSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 164
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
L + + D IR++D+ + R V E H +T FS DG L+SSG D +WD+
Sbjct: 165 LFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICSVWDL 221
Score = 140 (54.3 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 38/119 (31%), Positives = 58/119 (48%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
S LLASG+ +W L RL V R H + S+ F + +L SASAD S++
Sbjct: 493 SPNDKLLASGSQDRTAKLWALSDLRLLGVCR-GHRRGVWSVQFSPVDQILGSASADGSVR 551
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
+W D L+ GH A L I F + G ++S+G D +L+++ ++ R L
Sbjct: 552 IWSIQ----DFSCLKTFEGHDASVLKIIFVSRGTQLVSSGSDGLVKLWTIKTNECVRTL 606
Score = 138 (53.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 34/140 (24%), Positives = 70/140 (50%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GSQ+ + +LW +S + L +G P ++ +DG + + +++ L
Sbjct: 502 GSQDRTAKLWALSDLRLLGVCRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCL 561
Query: 217 VTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
TF H +V + F S G L++SG S G++ +W ++ + +AH + + +LH
Sbjct: 562 KTFEGHD--ASVLKIIFVSRGTQLVSSG-SDGLVKLWTIKTNECVRTL-DAHQDKVWALH 617
Query: 276 FFANEPVLMSASADNSIKMW 295
+ ++++ SAD++I +W
Sbjct: 618 GGCRDELMVTGSADSTITVW 637
Score = 129 (50.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 54/242 (22%), Positives = 96/242 (39%)
Query: 394 TCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGN-FAVLGTAGGWIERFN 452
TC D + VWR+ H + + AV + S F V G+ ++ ++
Sbjct: 403 TCAKDKS-VRVWRMDVSSGRVHCVAQGTGHSNAVGSIACSRMKQQFVVSGSQDCTVKVWD 461
Query: 453 LQSGISRGSYLDMSERSNY-AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
L + M RS AH +V V + L+ S K+W L
Sbjct: 462 LPETTGAEGVMMMKARSTERAHEKDVNSVCVSPNDKLLASGSQDRTAKLWALSDLRLLGV 521
Query: 512 WEVGCSLV-KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
V + + V+ +L + + D +R++ + ++ FEGH + F G
Sbjct: 522 CRGHRRGVWSVQFSPVDQILGSASADGSVRIWSIQDFSCLKTFEGHDASVLKIIFVSRGT 581
Query: 571 WLLSSGMDGSLRIWDVIL---ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWV 627
L+SSG DG +++W + R +DA H D + AL +++ T D + +W
Sbjct: 582 QLVSSGSDGLVKLWTIKTNECVRTLDA-HQD-KVWALHGGCRDELMVTGSADST-ITVWT 638
Query: 628 NR 629
++
Sbjct: 639 DK 640
Score = 115 (45.5 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 32/125 (25%), Positives = 58/125 (46%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAV-- 198
P M D + G +G+++LW++ + + KG P + + +
Sbjct: 108 PVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFS 167
Query: 199 GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
SD I + ++R V S VTALAFS DG L++SG + S+W+L++++
Sbjct: 168 SSSDCAIRIWDLR-SSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDK-ICSVWDLQEQK 225
Query: 259 LQSVI 263
++ I
Sbjct: 226 VKRTI 230
Score = 95 (38.5 bits), Expect = 5.6e-09, Sum P(2) = 5.6e-09
Identities = 29/129 (22%), Positives = 65/129 (50%)
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFAN 279
HS+ V +++F LLA+G G I +W++ K+ ++ + ++ H +
Sbjct: 105 HSV--PVASMSFDCTST-LLATGGCDGTIKLWDVIKQYCTHNLKGSSGVVHLVEFHPDIS 161
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 339
L S+S+D +I++W ++ R + H +P + F +G ++S+G+D+
Sbjct: 162 RLQLFSSSSDCAIRIWDLRSS----RCVCVLESHYSPVTALAFSPDGHTLVSSGRDKICS 217
Query: 340 LFSVIQDQQ 348
++ +Q+Q+
Sbjct: 218 VWD-LQEQK 225
Score = 86 (35.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 21/97 (21%), Positives = 48/97 (49%)
Query: 200 CSDG-KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
C+ G KI++ + + + + + +TA A S D + +L S + + ++ W+ ++++
Sbjct: 38 CTYGPKINILQISTGKIIHSIEQEDQEDITAFALSPDDE-MLVSASRALLLRQWDWKQQQ 96
Query: 259 LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+ R H + S+ F +L + D +IK+W
Sbjct: 97 CRRSWRAVHSVPVASMSFDCTSTLLATGGCDGTIKLW 133
Score = 56 (24.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 22/104 (21%), Positives = 43/104 (41%)
Query: 249 ISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLR 308
I+I + ++ I + I + ++ +L+SAS ++ W D R
Sbjct: 44 INILQISTGKIIHSIEQEDQEDITAFALSPDDEMLVSASRALLLRQW--DWKQQQCRR-S 100
Query: 309 FRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
+R+ HS P + F + + G D +L+ VI+ + L
Sbjct: 101 WRAVHSVPVASMSFDCTSTLLATGGCDGTIKLWDVIKQYCTHNL 144
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 76 HIAVVKRAHQVATWSRHSAKVNLLLLFGEHILSIDI--DGNMF 116
HIAV + Q+ + + +L + ILSID+ G+MF
Sbjct: 359 HIAVATNSSQLKVFELSTNSCQILHGHTDTILSIDVFRKGSMF 401
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYHR 525
AH +V + + LM++ I VW K R +KS +V SL K + R
Sbjct: 608 AHQDKVWALHGGCRDELMVTGSADSTITVWTDKLRKTVIIKSTKKVDQSLFKFTHFR 664
Score = 45 (20.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 23/123 (18%), Positives = 49/123 (39%)
Query: 146 HPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXP-ALDVVAVG----C 200
HPD ++ S + ++++W++ + + + + P +V+ G C
Sbjct: 157 HPDISRLQLFSSSSDCAIRIWDLRSSRCVCVLESHYSPVTALAFSPDGHTLVSSGRDKIC 216
Query: 201 SDGKIHVHNVRYD---EELVTFTHSMRGAV--TALAFSSDGQPLLASGASSGVISIWNLE 255
S + V+ E V + G+ + + SD L+ +G S GV+ +W+
Sbjct: 217 SVWDLQEQKVKRTIPVYEAVEGVVLLSGSADYSEMGVKSDALHLVTAG-SKGVLRVWDSS 275
Query: 256 KRR 258
R
Sbjct: 276 SSR 278
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 155 (59.6 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 51/203 (25%), Positives = 93/203 (45%)
Query: 150 YLNKVIVG-SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
Y ++++V SQ+G L +W+ T K++ P+ + VA G D ++
Sbjct: 65 YDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124
Query: 209 NVRYDEELVTFTHSMRGAVTALA---FSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
N++ E V + + G L+ F DGQ + +SG ++ ++W++E + Q+
Sbjct: 125 NLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSGDTT--CALWDIETGQ-QTTTFT 181
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
H ++SL + +S + D S K+W D DG R F +GH + + F+ +
Sbjct: 182 GHSGDVMSLSLSPDLKTFVSGACDASSKLW--DIRDGMCRQ-SF-TGHISDINAVSFFPS 237
Query: 326 GRHILSAGQDRAFRLFSVIQDQQ 348
G + D RLF + DQ+
Sbjct: 238 GYAFATGSDDATCRLFDLRADQE 260
Score = 131 (51.2 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 39/152 (25%), Positives = 70/152 (46%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
+ PD L + G+ + S +LW+I F G P+ A G D
Sbjct: 192 LSPD--LKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDAT 249
Query: 205 IHVHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
+ ++R D+EL+ ++H ++ +T++AFS G+ LLA G S+W+ K V+
Sbjct: 250 CRLFDLRADQELLLYSHDNIICGITSVAFSKSGRLLLA-GYDDFNCSVWDALKGGRSGVL 308
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +++W
Sbjct: 309 A-GHDNRVSCLGVTDDGMAVATGSWDSFLRIW 339
Score = 100 (40.3 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LA 531
H+G+V+ ++ +S K+WD + + + S + V +G A
Sbjct: 183 HSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFA 242
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
T +DD RLFD+ A + + + H + IT FS+ G+ LL+ D + +WD +
Sbjct: 243 TGSDDATCRLFDLRADQELLLYS-HDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GGRSGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLRIW 339
Score = 84 (34.6 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGYDSR-LLVSASQDGKLIIWDSYTTNKMHAI-PLRSSWVMTCAYAPSGNYVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF +G+ I S+G D L+ +
Sbjct: 116 GLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
Score = 74 (31.1 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 508 LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSE 567
L S + C + + + + LL DD ++D + GH +R++ ++
Sbjct: 263 LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCSVWDALKGGRSGVLAGHDNRVSCLGVTD 322
Query: 568 DGKWLLSSGMDGSLRIWD 585
DG + + D LRIW+
Sbjct: 323 DGMAVATGSWDSFLRIWN 340
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 129 (50.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 49/203 (24%), Positives = 96/203 (47%)
Query: 469 SNYAHNGEVVGVACDSTN-TLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRV 526
S++A V A S N L+ +A ++++D G +++ E + ++ +H
Sbjct: 138 SSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPW 197
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+LA I++FDV ++++ + H+ + D F G +LLS D ++RI D+
Sbjct: 198 GNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILDL 257
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASG 644
+ R I + H D ++ A++ S + D AT D+ + +W + + + D++ + +
Sbjct: 258 LEGRPIYTLTGHTD-AVNAVAFSRDGDKFATGGSDRQ-LLVWQSN-LHTYDAS--QFEAK 312
Query: 645 KEIVSVKMPSVSSVEGCQDENSS 667
+ S S S V Q E SS
Sbjct: 313 SALASSSCES-SGVSSKQSEGSS 334
Score = 127 (49.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLL 530
+H+ V GVA L+ SAG+ +K+W+ K R + + V+ V + L+
Sbjct: 58 SHSAPVNGVAWSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLM 117
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
T +DD +++ V + V F + + FS +GK + ++ D S+RI+DV
Sbjct: 118 LTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDV 173
Score = 104 (41.7 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 38/143 (26%), Positives = 68/143 (47%)
Query: 219 FT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
FT HS G +T L F DG + S S VI +WNL + + + +H + + +
Sbjct: 14 FTGHS--GGITQLRFGPDGAQIATSSTDSTVI-LWNLNQAA-RCIRFASHSAPVNGVAWS 69
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG----HSAPPLCIRFYANGRHILSAG 333
++ SA D ++K+W +P+L R SG HS + F + G +L+A
Sbjct: 70 PKGNLVASAGHDRTVKIW-------EPKL-RGVSGEFVAHSKAVRSVDFDSTGHLMLTAS 121
Query: 334 QDRAFRLFSVIQDQQSRELSQRH 356
D++ +++ V + Q +Q++
Sbjct: 122 DDKSAKIWRVARRQFVSSFAQQN 144
Score = 53 (23.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
DP L R +GHS +RF +G I ++ D L+++ Q
Sbjct: 7 DPALERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQ 49
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 126 (49.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 42/175 (24%), Positives = 75/175 (42%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
P T ++++ GS + + +LW+ T+ + KG P ++A G D I
Sbjct: 144 PSTS-SRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIR 202
Query: 207 VHNVRYDEELVTFTHSMRGAVTALAF-----SSDGQP-LLASGASSGVISIWNLEKRRLQ 260
+ + + + AL + + D P LLASG+ + IWN++ R L
Sbjct: 203 FWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLL 262
Query: 261 SVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
+ H I + + + + S+S D +I++W D DG + L GH+A
Sbjct: 263 FTL-SGHTAPITCVRW-GGQNWIYSSSYDKTIRIW--DAKDG--KCLHILKGHAA 311
Score = 108 (43.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 32/117 (27%), Positives = 62/117 (52%)
Query: 471 YAHNGEVVGVACDSTNTLMIS-AGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVN 527
+ H +VV A S + I+ A + +++WD K G+ L + R V ++ + + +
Sbjct: 386 HGHQ-KVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVA-AVYQCAWSTDS 443
Query: 528 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
LL + + D ++++DV + +M GH D++ +S DG+ + S G D ++RIW
Sbjct: 444 RLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 103 (41.3 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 484 STNTLMISAGY-HGDIKVWDFKG--RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIR 540
ST ++ S Y H D K F R K R+E C +K R L + +DDL +
Sbjct: 319 STEHVLRSGAYDHTDFKPKSFSDERRKAKERYEA-C--LKQSGER----LVSASDDLQLI 371
Query: 541 LFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
L+D + + + K GH + FS DG+ + ++ D S+R+WD
Sbjct: 372 LWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWD 417
Score = 101 (40.6 bits), Expect = 6.1e-10, Sum P(2) = 6.1e-10
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
+AT + D +RL+D + + GH + +S D + L+SS D +L++WDV
Sbjct: 404 IATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK 463
Query: 590 R-QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + D + + A+ SP+ +A+ D+ V +W
Sbjct: 464 KMKFDLPGHEDQVFAVDWSPDGQRVASGGADK-AVRIW 500
Score = 101 (40.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK-WLLSSGMDGSLRIWDVI 587
LLA+ + D +R+++V ++ GHT IT C G+ W+ SS D ++RIWD
Sbjct: 241 LLASGSKDNTVRIWNVKLRTLLFTLSGHTAPIT--CVRWGGQNWIYSSSYDKTIRIWD-- 296
Query: 588 LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 624
A+ +H+ + + N L+T HV ++G Y
Sbjct: 297 -AKDGKCLHI---LKGHAARVNHLSLSTEHVLRSGAY 329
Score = 78 (32.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 28/126 (22%), Positives = 59/126 (46%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G + + FS L +G+ +W+ + + + ++ H N + + + + ++
Sbjct: 135 GTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMK-GHTNWVSCVAWAPDASIIA 193
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAP--PLCIR--FYA--NGRHILSAG-QDRA 337
+ S DN+I+ W D G P R H+ P LC + A +G ++L++G +D
Sbjct: 194 TGSMDNTIRFW--DPKKGSPIGDALRR-HTKPIMALCWQPLHLAPDSGPYLLASGSKDNT 250
Query: 338 FRLFSV 343
R+++V
Sbjct: 251 VRIWNV 256
>UNIPROTKB|Q7YR70 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9615 "Canis lupus familiaris" [GO:0014909 "smooth muscle
cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 CTD:14
GeneTree:ENSGT00690000102167 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OMA:VWSFEVG OrthoDB:EOG4D26PX GO:GO:0001525
GO:GO:0010595 GO:GO:0014909 EMBL:AY197355 RefSeq:NP_001013872.1
UniGene:Cfa.8616 ProteinModelPortal:Q7YR70 STRING:Q7YR70
Ensembl:ENSCAFT00000023220 GeneID:478908 KEGG:cfa:478908
InParanoid:Q7YR70 NextBio:20854176 Uniprot:Q7YR70
Length = 435
Score = 125 (49.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 44/157 (28%), Positives = 74/157 (47%)
Query: 191 PALDVVAV-GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVI 249
P + +AV G D K V + D EL+ + +VT FS D L+A+G SG++
Sbjct: 102 PKTNTLAVTGGEDDKAFVWRLS-DGELLFECAGHKDSVTCAGFSHDST-LVATGDMSGLL 159
Query: 250 SIWNLE-KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLR 308
+W ++ K + S EA D + H PVL++ +AD + MW +GD + +
Sbjct: 160 KVWQVDTKEEVWSF--EAGDLEWMEWH--PRAPVLLAGTADGNTWMW--KVPNGDCKTFQ 213
Query: 309 FRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
G + P C R +G+ + +D R++ + Q
Sbjct: 214 ---GPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQ 247
Score = 107 (42.7 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 22/99 (22%), Positives = 53/99 (53%)
Query: 489 MISAGY-HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
+ + GY G + ++D + L+ + + +V++++ ++ T + D ++RL+D
Sbjct: 332 LAAVGYLDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTG 391
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
R++ + GHT I DF S+D ++++ D +++ V
Sbjct: 392 RLLTDYRGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 430
Score = 99 (39.9 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 48/207 (23%), Positives = 83/207 (40%)
Query: 88 TWSRHSAKVNLLLLFGE-HILSID--IDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
T++ HSA V + L + + L++ D F+W E GH D T
Sbjct: 87 TFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGH---KDSVTCAGF 143
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
H T V G G L++W + TK++++ F+ G P V+ G +DG
Sbjct: 144 SHDSTL---VATGDMSGLLKVWQVDTKEEVWSFEA-GDLEWMEWH-PRAPVLLAGTADGN 198
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ V + + TF T DG+ + G G I IW+L++ V++
Sbjct: 199 TWMWKVP-NGDCKTF-QGPNCPATCGRVLPDGKRAVV-GYEDGTIRIWDLKQGSPIHVLK 255
Query: 265 --EAHDNAIISLHFFANEPVLMSASAD 289
E H + + + ++++ S D
Sbjct: 256 GTEGHQGPLTCVATNQDGSLILTGSVD 282
Score = 43 (20.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 14/78 (17%), Positives = 32/78 (41%)
Query: 468 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRV 526
R H +V + ++ ++ + G +++WD + GR L ++ +
Sbjct: 353 RHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDYRGHTAEILDFALSKD 412
Query: 527 NGLLATVADDLVIRLFDV 544
L+ T + D ++F V
Sbjct: 413 ASLVVTTSGDHKAKVFCV 430
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 192 (72.6 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 66/266 (24%), Positives = 116/266 (43%)
Query: 81 KRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGN----MFIWAFKGIEENLAPVGHVKLD 136
KRA+++ + HSA VN L + G + + G + +WA L+ GH
Sbjct: 4 KRAYKLQEFVAHSAAVNCLKI-GRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 62
Query: 137 DKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVV 196
D T D V G+ G+++LW++ K + G P +
Sbjct: 63 DSVTF------DASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFF 116
Query: 197 AVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
A G D + + ++R + T+ RG V L F+ DG+ + SG V+ +W+L
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRG-VNVLRFTPDGR-WIVSGGEDNVVKVWDLTA 174
Query: 257 RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAP 316
+L + +H+ I SL F +E +L + SAD ++K W +T + L+ +
Sbjct: 175 GKLLHEFK-SHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFE----LIGSGGTETTG 229
Query: 317 PLCIRFYANGRHILSAGQDRAFRLFS 342
C+ F +G+ +L G + ++FS
Sbjct: 230 VRCLTFNPDGKSVL-CGLQESLKIFS 254
Score = 165 (63.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 37/160 (23%), Positives = 78/160 (48%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVN 527
S Y H+ + V D++ L+ + G IK+WD + + +++ + V + +H
Sbjct: 54 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 113
Query: 528 GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
A+ + D ++++D+ + ++GHT + F+ DG+W++S G D +++WD+
Sbjct: 114 EFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLT 173
Query: 588 LARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + + I +L P+ +LAT D+ V W
Sbjct: 174 AGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKT-VKFW 212
Score = 136 (52.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 41/167 (24%), Positives = 82/167 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVT-FTHSMRGAVTALAF-SSDGQPLLASGASSGVISIW 252
V+ G D K+++ + +++ + HS + ++ F +S+G L+A+GA+SG I +W
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHS--SGIDSVTFDASEG--LVAAGAASGTIKLW 86
Query: 253 NLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG 312
+LE+ ++ + H + +S++F S S D ++K+W G + G
Sbjct: 87 DLEEAKVVRTLT-GHRSNCVSVNFHPFGEFFASGSLDTNLKIWDI-RKKG---CIHTYKG 141
Query: 313 HSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 359
H+ +RF +GR I+S G+D +++ + + E H K
Sbjct: 142 HTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS-HEGK 187
Score = 45 (20.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 680 DSFGLPTFKQQIPDLVTLSLLPKSQWQSL 708
DS L + + + PDL T SLL +SQ Q +
Sbjct: 507 DSRRLSSSRNE-PDLPTSSLLERSQSQPI 534
Score = 38 (18.4 bits), Expect = 6.8e-10, Sum P(2) = 6.8e-10
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 750 ESTKEDTESLKVGNKTKPDIPVSQFIQ 776
+S D+ L ++ +PD+P S ++
Sbjct: 502 QSKAADSRRLS-SSRNEPDLPTSSLLE 527
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/187 (28%), Positives = 97/187 (51%)
Query: 158 SQEGSLQLWNIST--KKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEE 215
S + ++ LW+ + KK L F G P V G +DGKI +++V +
Sbjct: 104 SLDSTMCLWDARSGDKKHLLSF-G-PVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKA 161
Query: 216 LVTFTHSMRGAVT-ALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
T + G T ++A+S DG+ +ASGA G+I+I+++ ++ + E H + SL
Sbjct: 162 EQTLD-AQNGKYTLSIAYSPDGK-YIASGAIDGIITIFDVAAGKVVQTL-EGHAMPVRSL 218
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F N +L++AS D +K+ +D T D ++ SGH++ LC+ F +G+H S+
Sbjct: 219 CFSPNSQLLLTASDDGHMKL--YDVTHSD--VVGTLSGHASWVLCVAFSEDGKHFASSSS 274
Query: 335 DRAFRLF 341
D + +++
Sbjct: 275 DNSVKIW 281
Score = 159 (61.0 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 53/206 (25%), Positives = 90/206 (43%)
Query: 424 PTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGE-VVGVAC 482
P + S C + + G G I +++++G +E++ A NG+ + +A
Sbjct: 127 PVDLWTVQFSPCNKYVISGLNDGKISMYSVETG--------KAEQTLDAQNGKYTLSIAY 178
Query: 483 DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRL 541
+ S G I ++D + E V+ + N LL T +DD ++L
Sbjct: 179 SPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKL 238
Query: 542 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQID--AIHVDV 599
+DV +V GH + FSEDGK SS D S++IWD + + A H D
Sbjct: 239 YDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDTSERKCLHTFAEHTD- 297
Query: 600 SITALSLSPNMDVLATAHVDQN-GVY 624
+ + SP D +A+A D++ +Y
Sbjct: 298 QVWGVRYSPGNDKVASASEDKSLNIY 323
Score = 120 (47.3 bits), Expect = 0.00051, P = 0.00051
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 477 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVG-CSLVKIVYHRVNGLLATVAD 535
VV VA S + S+ + +WD + D K G L + + N + + +
Sbjct: 88 VVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLN 147
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRIT-DFCFSEDGKWLLSSGMDGSLRIWDVILARQIDA 594
D I ++ V + + + + T +S DGK++ S +DG + I+DV + +
Sbjct: 148 DGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQT 207
Query: 595 I--HVDVSITALSLSPNMDVLATAHVD 619
+ H + + +L SPN +L TA D
Sbjct: 208 LEGHA-MPVRSLCFSPNSQLLLTASDD 233
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 154 (59.3 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 51/207 (24%), Positives = 92/207 (44%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
MH T ++ SQ+G L +W+ T K++ P+ + VA G D
Sbjct: 61 MHWATDSKLLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 205 IHVHNVRYDEELVTFTHSMR---GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
++N++ E V + + G ++ F D + +SG ++ ++W++E + Q
Sbjct: 121 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT--CALWDIETGQ-QK 177
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H +SL + + +S + D S K+W D +G R F +GH + I
Sbjct: 178 TVFVGHTGDCMSLAVSPDFNLFISGACDASAKLW--DVREGTCRQT-F-TGHESDINAIC 233
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQ 348
F+ NG I + D + RLF + DQ+
Sbjct: 234 FFPNGEAICTGSDDASCRLFDLRADQE 260
Score = 150 (57.9 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 49/208 (23%), Positives = 92/208 (44%)
Query: 90 SRHSAKVNLL-LLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S H+ ++ L +I++ D +W + ++ VGH D + + PD
Sbjct: 140 SAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT--GDCMS--LAVSPD 195
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
N I G+ + S +LW++ F G P + + G D +
Sbjct: 196 --FNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLF 253
Query: 209 NVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
++R D+EL+ F+H S+ +T++AFS G+ LL +G ++W+ K ++ H
Sbjct: 254 DLRADQELICFSHESIICGITSVAFSLSGR-LLFAGYDDFNCNVWDSMKSERVGIL-SGH 311
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
DN + L A+ + + S D+ +K+W
Sbjct: 312 DNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 71 (30.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + LL DD ++D + V GH +R++ + DG + +
Sbjct: 271 CGITSVAFSLSGRLLFAGYDDFNCNVWDSMKSERVGILSGHDNRVSCLGVTADGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 157 (60.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 57/260 (21%), Positives = 118/260 (45%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVK-LDDKFTPTCIMHPDTYLNKVIVGSQ 159
G+ + S D + IW A+ G E L GH + + D D+ L + S
Sbjct: 58 GKWLASASADKTIKIWGAYDGKFERTLE--GHKEGISD-----IAWSQDSKL--ICSASD 108
Query: 160 EGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE--ELV 217
+ ++++W++ + K + KG P +++ G D + + +V E +++
Sbjct: 109 DKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMI 168
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
+ HS VT + F+ DG L+ SG+ G + IW+ +L + I + + F
Sbjct: 169 S-AHS--DPVTGVHFNRDGT-LVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFS 224
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI--RFYAN-GRHILSAGQ 334
N +++ + DN++++W ++ + + L+ +GH CI F G+ I++ +
Sbjct: 225 PNGKFVLAGTLDNTLRLWSYNN---NKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSE 281
Query: 335 DRAFRLFSVIQDQQSRELSQ 354
D ++++ Q+RE+ Q
Sbjct: 282 DNLIYIYNL----QTREIVQ 297
Score = 156 (60.0 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 44/186 (23%), Positives = 86/186 (46%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y ER+ H + +A + L+ SA IK+WD
Sbjct: 58 GKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDV 117
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
+ G+ +K+ + + ++ + L+ + + D +R++DV + H+D +T
Sbjct: 118 ESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTG 177
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD--VSITALSLSPNMDVLATAHVDQ 620
F+ DG ++S DG++RIWD + ++ I + ++ + SPN + +D
Sbjct: 178 VHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLD- 236
Query: 621 NGVYLW 626
N + LW
Sbjct: 237 NTLRLW 242
Score = 122 (48.0 bits), Expect = 0.00031, P = 0.00031
Identities = 44/170 (25%), Positives = 81/170 (47%)
Query: 489 MISAGYHGDIKVWD-FKG---RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 544
+ SA IK+W + G R L+ E G S I + + + L+ + +DD I+++DV
Sbjct: 61 LASASADKTIKIWGAYDGKFERTLEGHKE-GIS--DIAWSQDSKLICSASDDKTIKIWDV 117
Query: 545 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR--QIDAIHVDVSIT 602
+ +MV+ +GH + + F+ ++S D ++RIWDV ++ + H D +T
Sbjct: 118 ESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSD-PVT 176
Query: 603 ALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDS-NIDSYASGKEIVSVK 651
+ + + ++ + D V +W +G N S GKE+ VK
Sbjct: 177 GVHFNRDGTLVVSGSYDGT-VRIWDTT---TGQLLNTISTEDGKEVSFVK 222
Score = 117 (46.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 41/165 (24%), Positives = 81/165 (49%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V GV + TL++S Y G +++WD G+ L + V V NG
Sbjct: 170 AHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKF 229
Query: 529 LLATVADDLVIRLFDVVA-LRMVRKFEGH-TDRITDFC-FSED-GKWLLSSGMDGSLRIW 584
+LA D+ +RL+ + ++ + GH ++ F FS GKW+++ D + I+
Sbjct: 230 VLAGTLDN-TLRLWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIY 288
Query: 585 DVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQN-GVYLW 626
++ + + H DV +T ++ P +++A+ ++++ V +W
Sbjct: 289 NLQTREIVQTLAGHEDVVLT-VACHPTENIIASGALEKDRSVKIW 332
Score = 111 (44.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 31/128 (24%), Positives = 61/128 (47%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
+++++ FS DG+ LAS ++ I IW + + + E H I + + + ++ S
Sbjct: 48 SISSVKFSPDGK-WLASASADKTIKIWGAYDGKFERTL-EGHKEGISDIAWSQDSKLICS 105
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
AS D +IK+W D G ++++ GH + F I+S D R++ V
Sbjct: 106 ASDDKTIKIW--DVESG--KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNT 161
Query: 346 DQQSRELS 353
+ ++ +S
Sbjct: 162 GECTKMIS 169
Score = 76 (31.8 bits), Expect = 5.8e-07, Sum P(2) = 5.8e-07
Identities = 24/79 (30%), Positives = 38/79 (48%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H +I S+ F + L SASAD +IK+W DG + R GH I +
Sbjct: 43 KGHLKSISSVKFSPDGKWLASASADKTIKIW--GAYDG--KFERTLEGHKEGISDIAWSQ 98
Query: 325 NGRHILSAGQDRAFRLFSV 343
+ + I SA D+ +++ V
Sbjct: 99 DSKLICSASDDKTIKIWDV 117
Score = 57 (25.1 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 19/69 (27%), Positives = 30/69 (43%)
Query: 435 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 494
CG + V G+ I +NLQ+ R ++ H V+ VAC T ++ S
Sbjct: 272 CGKWIVTGSEDNLIYIYNLQT---REIVQTLA-----GHEDVVLTVACHPTENIIASGAL 323
Query: 495 HGD--IKVW 501
D +K+W
Sbjct: 324 EKDRSVKIW 332
Score = 45 (20.9 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 10/48 (20%), Positives = 23/48 (47%)
Query: 306 LLRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
+L++ GH ++F +G+ + SA D+ +++ + R L
Sbjct: 37 ILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTL 84
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 146 (56.5 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 55/237 (23%), Positives = 102/237 (43%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQEGS 162
++LS DG + +W+ + + GH D +F+P Y + G +
Sbjct: 317 YLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP--------YGYYFVSGGHDRV 368
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+LW + L F G P + VA G +D + + +V + FT
Sbjct: 369 ARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFT-G 427
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+G + +L FS +G+ LA+GA+ G + +W++ + ++ H + + SL F + +
Sbjct: 428 HKGPIHSLTFSPNGR-FLATGATDGRVLLWDIGHGLMVGELK-GHTDTVCSLRFSRDGEI 485
Query: 283 LMSASADNSIKMW----IFDT--TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
L S S DN++++W F+ TD LL + P+ + +L+AG
Sbjct: 486 LASGSMDNTVRLWDAVKAFEDLETDNSQELLLGTYMTKSTPVVHLHFTRRNLVLAAG 542
Score = 136 (52.9 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 33/106 (31%), Positives = 57/106 (53%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + +AT + D +RL+DV+ VR F GH I FS +G++L + DG +
Sbjct: 395 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 454
Query: 583 IWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+WD+ + + H D ++ +L S + ++LA+ +D N V LW
Sbjct: 455 LWDIGHGLMVGELKGHTD-TVCSLRFSRDGEILASGSMD-NTVRLW 498
Score = 120 (47.3 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 27/64 (42%), Positives = 38/64 (59%)
Query: 527 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
NG LAT A D + L+D+ MV + +GHTD + FS DG+ L S MD ++R+WD
Sbjct: 440 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 499
Query: 586 VILA 589
+ A
Sbjct: 500 AVKA 503
Score = 114 (45.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ + F
Sbjct: 298 ILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQF 353
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D ++W D P LR +GH A C RF+ N ++ + DR
Sbjct: 354 SPYGYYFVSGGHDRVARLWATDHYQ--P--LRIFAGHLADVNCTRFHPNSNYVATGSADR 409
Query: 337 AFRLFSVI 344
RL+ V+
Sbjct: 410 TVRLWDVL 417
Score = 87 (35.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 27/104 (25%), Positives = 47/104 (45%)
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EK + I H + F + L+S+S D ++++W T L+ ++ GH+
Sbjct: 290 EKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTC---LVGYK-GHN 345
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
P +F G + +S G DR RL++ Q R + H+A
Sbjct: 346 YPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLR-IFAGHLA 388
Score = 79 (32.9 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 25/110 (22%), Positives = 55/110 (50%)
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
+D L+A G + + +W++ ++L+SV ++A D ++I +D+ ++
Sbjct: 239 TDDSSLIAGGFADSTVRVWSVTPKKLRSV-KQAADLSLID------------KESDDVLE 285
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + T + ++L GHS P F + ++LS+ +D RL+S+
Sbjct: 286 RIMDEKTASELKILY---GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL 332
Score = 61 (26.5 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 31/143 (21%), Positives = 58/143 (40%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + ++++W++ T KKL K L ++ D + + + EL
Sbjct: 248 GFADSTVRVWSV-TPKKLRSVK----------QAADLSLIDKESDDVLERIMDEKTASEL 296
Query: 217 -VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+ + HS G V +FS D LL+S + G + +W+L+ V + H+ +
Sbjct: 297 KILYGHS--GPVYGASFSPDRNYLLSS-SEDGTVRLWSLQTFTCL-VGYKGHNYPVWDTQ 352
Query: 276 FFANEPVLMSASADNSIKMWIFD 298
F +S D ++W D
Sbjct: 353 FSPYGYYFVSGGHDRVARLWATD 375
Score = 56 (24.8 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGR---DLKSRWEVGCSLVKIVYHRVNG 528
H G + + + + G + +WD G +LK + CSL + R
Sbjct: 428 HKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLR---FSRDGE 484
Query: 529 LLATVADDLVIRLFDVV 545
+LA+ + D +RL+D V
Sbjct: 485 ILASGSMDNTVRLWDAV 501
>UNIPROTKB|E1BB53 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005697 "telomerase holoenzyme
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003720 "telomerase activity" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003723 GO:GO:0016363 GO:GO:0000722
InterPro:IPR007111 PROSITE:PS50837 GO:GO:0005697 GO:GO:0003720
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:DAAA02028332 IPI:IPI00689872 Ensembl:ENSBTAT00000001564
Uniprot:E1BB53
Length = 2627
Score = 131 (51.2 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 86/312 (27%), Positives = 130/312 (41%)
Query: 421 PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL--DMSERSNYAHN-GEV 477
P+ P + C+ SAC V G A W + L S S GS D R H G
Sbjct: 2102 PKAPVLI--CSFSACHRDWVTGCA--WTKDSLLVSCSSDGSVALWDPESRQQLGHFLGHQ 2157
Query: 478 VGV-ACDSTNTLMISAGYHGDIKVWDFKGRDLKS-RWEVG--CSLVKIVYHRVNG----- 528
V A + ++S G G +KVWD +G ++ S G V + R G
Sbjct: 2158 HAVSAVVAVEEHVVSVGRDGTLKVWDHQGVEMTSIPAHSGPISHCVAALEPRAAGQPGSE 2217
Query: 529 -LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
L+ TV D RL+ + + GH+ ++ SE LL++ DGSLR+W V
Sbjct: 2218 LLVVTVGLDGATRLWHPLLVFQTHTLLGHSGPVSAAAVSETSGLLLTTSEDGSLRLWQV- 2276
Query: 588 LARQIDAIH---VDVSITALSLSPNMDVLATAHVDQNG-VYLW-----VNRCMFSGD-SN 637
++ D + +ITA++ +P D A +Q G + LW V G S
Sbjct: 2277 -PKEADDTYRPRSPAAITAVAWAP--DGSAAVSGNQAGELTLWQEAKAVVTVQAPGCISA 2333
Query: 638 IDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVH-RTDRVPKDSFGLPTFKQQIPDLVT 696
+ Y++ IV VS + + S+ +V R +RV ++ G T PD +
Sbjct: 2334 LLWYSAHTLIVVSANEKVSEWQVELQKGSTPRNVSLRLNRVLQEDLGFLTSVGLAPDAHS 2393
Query: 697 LSLLPKSQWQSL 708
L +L K+ Q L
Sbjct: 2394 L-ILAKADLQLL 2404
Score = 122 (48.0 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 52/204 (25%), Positives = 92/204 (45%)
Query: 153 KVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXXXPAL----DVVAVGC-SDGKIH 206
+++ ++G +Q+W+ S + +G G AL D VAVG +DG I
Sbjct: 1907 QLLTAGEDGKVQVWSGSLGRP----RGCLGSPHLSPALSVALSPDGDQVAVGYRADG-IR 1961
Query: 207 VHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV-IRE 265
+ + + ++ AV+AL + S +L SGA G + W L+ LQS+ +
Sbjct: 1962 ICRISSASQGAQ-GQALDVAVSALTWLSP--KVLVSGAEDGALQGWLLQGGTLQSLWLLS 2018
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW------IFDTTDGDPRLLRFRSGHSAPPLC 319
H ++ L ++ +L AS D ++++W + T+ PR R GH P C
Sbjct: 2019 RHRKPVLGLA--TSQELLAIASEDFTVRLWPRQLLMLPQKTEDFPRSTELR-GHEGPVSC 2075
Query: 320 IRFYANGRHILSAGQDRAFRLFSV 343
F +G + + G+DR+ + V
Sbjct: 2076 CSFSTDGCRLATGGRDRSLLCWDV 2099
Score = 103 (41.3 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
Identities = 64/255 (25%), Positives = 108/255 (42%)
Query: 112 DGNMFIWAFKGIEENLAPVGH----VKLD-DKFTPT-CIMHPDT-YLNKVIVGSQEGSLQ 164
D +F+ AF G+ E L + H +++ ++ T C + PD L V +G G L+
Sbjct: 1738 DNALFLTAFDGLLE-LWDLQHGCRVLQIQAHQYQITGCCLSPDRRLLATVCLG---GGLK 1793
Query: 165 LWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKI---HVHNVRYDEELVTFTH 221
LW++ + +L P V+AVG G HV +R +EL
Sbjct: 1794 LWDV-VRGQLASQHTCPKPLNCVAFHPEGQVIAVGGWAGSFSFFHVDGLRVTKELGAPGA 1852
Query: 222 SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANE 280
S+R LAF G+ ++A G ++ +W ++ RL + AH + + F +
Sbjct: 1853 SVR----TLAFGVPGR-VVAVGRLDRMVELWAWQEGARLAAF--PAHQGFVATALFLRSG 1905
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL---SAGQDRA 337
L++A D +++W + G PR S H +P L + +G + A R
Sbjct: 1906 CQLLTAGEDGKVQVW--SGSLGRPRGC-LGSPHLSPALSVALSPDGDQVAVGYRADGIRI 1962
Query: 338 FRLFSVIQDQQSREL 352
R+ S Q Q + L
Sbjct: 1963 CRISSASQGAQGQAL 1977
Score = 99 (39.9 bits), Expect = 3.3e-08, Sum P(3) = 3.3e-08
Identities = 39/159 (24%), Positives = 74/159 (46%)
Query: 197 AVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
AVG ++G +++ ++R ++ + G V++ +F SD L A G++ +W+L+
Sbjct: 1701 AVGTANGTVYLLDLRTWQDERSMVSGGDG-VSSCSFLSDNALFLT--AFDGLLELWDLQH 1757
Query: 257 R-RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
R+ + +AH I + +L + +K+W D G + S H+
Sbjct: 1758 GCRVLQI--QAHQYQITGCCLSPDRRLLATVCLGGGLKLW--DVVRG-----QLASQHTC 1808
Query: 316 P-PL-CIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
P PL C+ F+ G+ I G +F F V + ++EL
Sbjct: 1809 PKPLNCVAFHPEGQVIAVGGWAGSFSFFHVDGLRVTKEL 1847
Score = 93 (37.8 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 44/172 (25%), Positives = 73/172 (42%)
Query: 475 GEVVGVACDSTNTL----MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-L 529
G+ + VA + L ++S G ++ W +G L+S W + ++ + L
Sbjct: 1974 GQALDVAVSALTWLSPKVLVSGAEDGALQGWLLQGGTLQSLWLLSRHRKPVLGLATSQEL 2033
Query: 530 LATVADDLVIRLFDVVALRMVRKFE---------GHTDRITDFCFSEDGKWLLSSGMDGS 580
LA ++D +RL+ L + +K E GH ++ FS DG L + G D S
Sbjct: 2034 LAIASEDFTVRLWPRQLLMLPQKTEDFPRSTELRGHEGPVSCCSFSTDGCRLATGGRDRS 2093
Query: 581 LRIWDV------ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L WDV +L A H D +T + + + +L + D V LW
Sbjct: 2094 LLCWDVRTPKAPVLICSFSACHRDW-VTGCAWTKD-SLLVSCSSD-GSVALW 2142
Score = 57 (25.1 bits), Expect = 0.00049, Sum P(3) = 0.00049
Identities = 17/68 (25%), Positives = 36/68 (52%)
Query: 228 TALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSAS 287
TA+AFS +GQ A G ++G + + +L + + + D + S F ++ + ++A
Sbjct: 1689 TAVAFSPNGQRA-AVGTANGTVYLLDLRTWQDERSMVSGGDG-VSSCSFLSDNALFLTAF 1746
Query: 288 ADNSIKMW 295
D +++W
Sbjct: 1747 -DGLLELW 1753
Score = 47 (21.6 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 20 SVQRLGTEN-FVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIRALASYR 66
SV TE F + + HI+ A+L L+G + P ++A + R
Sbjct: 436 SVSEKKTEQRFTLKKLVRRLHIHEPAQLVQALLGCRYPSNLQAFSRSR 483
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 136 (52.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 53/226 (23%), Positives = 99/226 (43%)
Query: 472 AHNGEVV-GVACDSTNTLMISAGYHGDIKVWDF----KGRDLKSRW-EVGCSLVKIVYHR 525
AH E + G+A T+ +A G +VWDF + R L+ EV C I +H
Sbjct: 214 AHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAEVRC----IDWHP 269
Query: 526 VNGLLATVADDLV--IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
GL+AT + D ++++D + + + H + F+++G WLL+ G D +++
Sbjct: 270 TKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKM 329
Query: 584 WDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID--S 640
+D+ + +++ + +L+ P + L + + W M G+ I
Sbjct: 330 YDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYW----MVDGEKEIGLLE 385
Query: 641 YASGKEIVSVKMPSVSSV--EGCQDENSSQPDVHRTDRVPKDSFGL 684
+A + I S+K + + G D N+ +R +D FGL
Sbjct: 386 HAHDQAIWSMKWHPLGHILATGSNDNNTKFWARNRPGDTVEDIFGL 431
Score = 101 (40.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
T + ++ V ++ +S +G+ L+ +G +G ++WN ++++ +AHD+AI +L +
Sbjct: 127 TAMNKVKCPVYSVCWSPEGKRLI-TGCQTGEFTLWNGTAFNFETIL-QAHDSAIRALKWA 184
Query: 278 ANEPVLMSASADNSIKMW 295
+NE L+SA +K W
Sbjct: 185 SNEQWLLSADQGGYVKYW 202
Score = 42 (19.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 153 KVIVGSQEGSLQLWN 167
++I G Q G LWN
Sbjct: 147 RLITGCQTGEFTLWN 161
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 159 (61.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 36/150 (24%), Positives = 72/150 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVD 619
+ H + + PN +LA+ D
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSD 210
Score = 144 (55.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 54/215 (25%), Positives = 93/215 (43%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKL 135
V K A ++ H++ V+ L+L G + + D + +W+ ++ GH
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT-- 63
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
+P + +T ++ GSQ GS+++W++ K L G P +
Sbjct: 64 ----SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
VA G D I + ++R + + HS AV L FS DG+ LAS A + +W+L
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDL 176
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASAD 289
++ S H + + F NE +L S S+D
Sbjct: 177 TAGKMMSEF-PGHTGPVNVVEFHPNEYLLASGSSD 210
Score = 138 (53.6 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 92 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Score = 134 (52.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 43/178 (24%), Positives = 80/178 (44%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 99 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N ++L++G
Sbjct: 155 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPN-EYLLASG 207
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 138 (53.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H G + + S+ ++ SA +KVWD + ++ + + +H L T
Sbjct: 128 HEGPINEIDIHSSGNIVASASSDKTVKVWDLEKGYCTHNFQHDDVVTMLKFHPTLLKLVT 187
Query: 533 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
V DL IR++D+V V H +I+ FS GK L+SSG D L +WD++
Sbjct: 188 VCLDLNIRVYDLVTKECVI-LTNHLSQISGITFSNSGKELISSGRDKVLNVWDML 241
Score = 122 (48.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 34/162 (20%), Positives = 76/162 (46%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVIS 250
P + + +GCS+ +I + + D+ LV G + + S G ++AS +S +
Sbjct: 97 PNNEEILIGCSNLQIKQYRIE-DQSLVKIWKGHEGPINEIDIHSSGN-IVASASSDKTVK 154
Query: 251 IWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFR 310
+W+LEK + HD+ + L F L++ D +I+ ++D + +L
Sbjct: 155 VWDLEKGYCTHNFQ--HDDVVTMLKFHPTLLKLVTVCLDLNIR--VYDLVTKECVIL--- 207
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
+ H + I F +G+ ++S+G+D+ ++ ++ + +
Sbjct: 208 TNHLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPKKTI 249
Score = 116 (45.9 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 46/171 (26%), Positives = 77/171 (45%)
Query: 503 FKGRDLKSRWEV-GCS--LVKIVY-HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTD 558
+ G+ L+ + E+ G + ++ I Y + N ++AT +++ I+ +D+ R + GH D
Sbjct: 369 YNGKTLERQGEIIGYNDEIIDIKYINDDNIIVATNSNE--IKTYDLNTKR-AQVLRGHED 425
Query: 559 RITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDV-SITALSLSPNMDVLAT 615
+ S DGK ++S D S IWD+ I + H V S AL P+ + A
Sbjct: 426 LVMSVDVSADGKHIISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAI 485
Query: 616 AHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENS 666
D + LW S DS K+I + SV+ + +D NS
Sbjct: 486 TASDDRTIKLWKGFSTTSSSGGDDSKKKDKKISA----SVTKIAHEKDINS 532
Score = 88 (36.0 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 26/114 (22%), Positives = 49/114 (42%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLL 530
AH V V + ++ G IK+W LK+ S++K + +
Sbjct: 567 AHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKASFISFGMQI 626
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+VA + +I+L+++ + FEGH +I ++D + ++ G D L W
Sbjct: 627 VSVASEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 83 (34.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 36/161 (22%), Positives = 72/161 (44%)
Query: 505 GRDLKSR-WEVGCSLVKIVYHR-VNGL--------LATVADDLVIRLFDVVALRMVRKFE 554
G D K + ++ S+ KI + + +N + AT + D ++L++V L + +
Sbjct: 507 GDDSKKKDKKISASVTKIAHEKDINSISIAPNDKIFATASQDSYVKLWNVNNLEPITSIK 566
Query: 555 GHTDRITDFCFSEDGKWLLSSGMDGSLRIW---DVILARQIDAIHVDVSITALSLSPNMD 611
H + FS + L+ DG+++IW D + ++ H + A +S M
Sbjct: 567 AHRRGVWHVEFSPIDQCFLTCSADGTIKIWSLSDYTCLKTLEG-HKGSVLKASFISFGMQ 625
Query: 612 VLATAHVDQNGVYLW---VNRCM--FSG-DSNIDSYASGKE 646
+++ A + + LW N C+ F G +S I + + K+
Sbjct: 626 IVSVA--SEGLIKLWNIKTNECLNTFEGHESKIWALSVAKD 664
Score = 69 (29.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 16/69 (23%), Positives = 37/69 (53%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
++ A S + + +L G S+ I + +E + L + + H+ I + ++ ++ SA
Sbjct: 90 ISTFALSPNNEEILI-GCSNLQIKQYRIEDQSLVKIWK-GHEGPINEIDIHSSGNIVASA 147
Query: 287 SADNSIKMW 295
S+D ++K+W
Sbjct: 148 SSDKTVKVW 156
Score = 48 (22.0 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLK 509
H ++ G+ ++ +IS+G + VWD ++ K
Sbjct: 210 HLSQISGITFSNSGKELISSGRDKVLNVWDMLSKNPK 246
Score = 46 (21.3 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 600 SITALSLSPNMDVLATAHVDQN 621
SI + + +MD + T+H+DQN
Sbjct: 839 SINPAASTLSMDRVETSHIDQN 860
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 125 (49.1 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 472 AHNGEVVGVACDSTN--TLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL 529
A + V C + L+IS G K+WD + R + + + +
Sbjct: 135 AEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADK 194
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ T D ++++D+ EGH D IT S DG +LL++GMD L +WD+
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 44/176 (25%), Positives = 76/176 (43%)
Query: 455 SGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV 514
+G +R S L+ H V + + TL+ S + +I +W G D K+ +
Sbjct: 34 NGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHG-DCKNFMVL 92
Query: 515 -GCSLVKIVYHRVN--GLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKW 571
G + H + + + + D +R +DV + ++K H+ + C + G
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPP 152
Query: 572 LLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ SG D G+ ++WD+ I ITA+S S D + T VD N V +W
Sbjct: 153 LIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVD-NDVKVW 207
Score = 101 (40.6 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
AV + F+ G L+ASG+ I +W + ++ + H NAI+ LH+ ++ ++S
Sbjct: 55 AVYTMKFNPAGT-LIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVS 113
Query: 286 ASADNSIKMWIFDT 299
AS D +++ W +T
Sbjct: 114 ASPDKTVRAWDVET 127
Score = 83 (34.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
++ H +A+ ++ F ++ S S D I +W GD + GH L +
Sbjct: 47 MLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW---RVHGDCKNFMVLKGHKNAILDLH 103
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQ 354
+ ++G I+SA D+ R + V +Q +++++
Sbjct: 104 WTSDGSQIVSASPDKTVRAWDVETGKQIKKMAE 136
Score = 80 (33.2 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 39/176 (22%), Positives = 68/176 (38%)
Query: 464 DMSERS---NYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK 520
DM +R + ++ V+ + + G D+KVWD + + E +
Sbjct: 167 DMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTIT 226
Query: 521 IVYHRVNG-LLATVADDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKW 571
+ +G L T D + ++D+ R V+ FEGH C +S DG
Sbjct: 227 GMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTK 286
Query: 572 LLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
+ + D + IWD R I + H S+ P ++ + D+N +YL
Sbjct: 287 VTAGSSDRMVHIWDTTSRRTIYKLPGHTG-SVNECVFHPTEPIIGSCSSDKN-IYL 340
>UNIPROTKB|Q2KJJ5 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 EMBL:BC105313
IPI:IPI00711976 RefSeq:NP_001040084.2 UniGene:Bt.20483
ProteinModelPortal:Q2KJJ5 STRING:Q2KJJ5 PRIDE:Q2KJJ5 GeneID:618429
KEGG:bta:618429 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
InParanoid:Q2KJJ5 KO:K14555 OrthoDB:EOG42JNQR NextBio:20901180
Uniprot:Q2KJJ5
Length = 800
Score = 128 (50.1 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 40/139 (28%), Positives = 61/139 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 529
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSL 227
Query: 590 RQIDAIHVDVSITALSLSP 608
+ + V S+ A L P
Sbjct: 228 QATRTVPVFESVEAAVLLP 246
Score = 124 (48.7 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 43/176 (24%), Positives = 75/176 (42%)
Query: 455 SGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV 514
+G G ++ + + H+ ++ VA + L+ + K+W L +
Sbjct: 460 TGHEGGPVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSG 519
Query: 515 GC-SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 573
L + + ++ +LAT + D I+L+ + ++ FEGH + F G LL
Sbjct: 520 HRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLL 579
Query: 574 SSGMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
SSG DG L++W + R +DA H D + L S +D A + V LW
Sbjct: 580 SSGSDGLLKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDRALTGASDSRVVLW 632
Score = 120 (47.3 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGA---VTALAFSSD-GQPLLASGASS 246
P ++A G DG + V +D TH RG+ V +AF D + LL S A+
Sbjct: 119 PTSTLLATGGCDGAVRV----WDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAAD 174
Query: 247 GVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRL 306
I +W+L++R +V+ AH +A+ SL F A+ ++S+ D +W + +
Sbjct: 175 TSIRVWSLQERSCLAVLT-AHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTV 233
Query: 307 LRFRSGHSA--------PPLCIRFYANGRHILSAGQDRAFRLF 341
F S +A P L ++ + G H L+AG A R++
Sbjct: 234 PVFESVEAAVLLPEEPAPELGVK--SAGLHFLTAGDQGALRVW 274
Score = 112 (44.5 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 490 ISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 545
++AG G ++VW+ GR + ++ + G L GLL +V D + L+D
Sbjct: 263 LTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAR 322
Query: 546 ALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSIT 602
+LR+ ++F G+++ + D F ED +++S L+++D+ A QI H D+ +
Sbjct: 323 SLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFDLQTSACQILHGHTDI-VL 380
Query: 603 ALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSVKMPSVS 656
AL + + A+ DQ+ + +W +N+ C+ G + S + I ++
Sbjct: 381 ALDVFRKGRLFASCAKDQS-IRVWRMNKSGEVACVAQGSGHTHSVGT---ICCSRLKETF 436
Query: 657 SVEGCQD 663
V G QD
Sbjct: 437 LVTGSQD 443
Score = 94 (38.1 bits), Expect = 9.3e-08, Sum P(3) = 9.3e-08
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 283
V +AF LLA+G G + +W++ R ++ L F +P +L
Sbjct: 112 VATMAFDPTST-LLATGGCDGAVRVWDVV--RCYGTHHFRGSPGVVHLVAFHPDPARLLL 168
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S++AD SI++W + L + H + + F A+G +LS+G+D+ ++ +
Sbjct: 169 FSSAADTSIRVWSLQ----ERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 224
Query: 344 IQDQQSR 350
Q +R
Sbjct: 225 RSLQATR 231
Score = 92 (37.4 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXX-XPALDVVAV 198
P M D + G +G++++W++ + F+G G PA ++
Sbjct: 111 PVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFS 170
Query: 199 GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
+D I V +++ L T + AVT+L FS+DG +L+SG + IW+L R
Sbjct: 171 SAADTSIRVWSLQERSCLAVLT-AHYSAVTSLTFSADGHTMLSSGRDK-ICVIWDL--RS 226
Query: 259 LQS 261
LQ+
Sbjct: 227 LQA 229
Score = 70 (29.7 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 54/283 (19%), Positives = 113/283 (39%)
Query: 46 LNLVLVGPQLPKKIRALASYRDYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEH 105
++LV P P ++ +S D + + ++ +R+ + +SA +L H
Sbjct: 154 VHLVAFHPD-PARLLLFSSAADTSIRVW----SLQERSCLAVLTAHYSAVTSLTFSADGH 208
Query: 106 -ILSIDIDGNMFIWAFKGIEEN-LAPV-----GHVKLDDKFTPTCIMHPDTYLNKVIVGS 158
+LS D IW + ++ PV V L ++ P + L+ + G
Sbjct: 209 TMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVK-SAGLHFLTAGD 267
Query: 159 QEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR-YDE 214
Q G+L++W ++ + ++ +G G A ++ +D HN+ YD
Sbjct: 268 Q-GALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTAD-----HNLLLYDA 321
Query: 215 ELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAI 271
+ G V + F + ++S + +++L+ Q I H + +
Sbjct: 322 RSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKVFDLQTSACQ--ILHGHTDIV 379
Query: 272 ISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
++L F + S + D SI++W + + G+ + SGH+
Sbjct: 380 LALDVFRKGRLFASCAKDQSIRVWRMNKS-GEVACVAQGSGHT 421
Score = 58 (25.5 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 23/132 (17%), Positives = 58/132 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+TA S D + +L + + + +++ W ++ + + + H + ++ F +L +
Sbjct: 69 ITAFDLSPDDK-VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATG 127
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 344
D ++++W G FR L + F+ + +L S+ D + R++S +
Sbjct: 128 GCDGAVRVWDVVRCYGTHH---FRGSPGVVHL-VAFHPDPARLLLFSSAADTSIRVWS-L 182
Query: 345 QDQQSRELSQRH 356
Q++ + H
Sbjct: 183 QERSCLAVLTAH 194
Score = 57 (25.1 bits), Expect = 0.00043, Sum P(3) = 0.00043
Identities = 25/107 (23%), Positives = 45/107 (42%)
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA--HDNAIISLHFFA 278
H V AL G+ L AS A I +W + K + + + H +++ ++
Sbjct: 373 HGHTDIVLALDVFRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSR 431
Query: 279 -NEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E L++ S D ++K+W LL +GH P+ ++ A
Sbjct: 432 LKETFLVTGSQDCTVKLWPLPEA-----LLSKGTGHEGGPVFLQAQA 473
Score = 52 (23.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 598 DVSITALSLSPNMDVLATAHVDQNGVYLW-VNRCMFSG 634
D I +++++PN +LAT D+ LW + RC G
Sbjct: 479 DKDINSVAVAPNDKLLATGSQDRTAK-LWALPRCQLLG 515
Score = 38 (18.4 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 811 IIDHDDHQELDKRPEYLSIELLLDYLIHE 839
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVVKQQELDNLLHE 663
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 117 (46.2 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 34/116 (29%), Positives = 55/116 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS----RWEVGCSLVKIVYHRVNG 528
H V VA ++SA + IK+WD GRD K R V S+ ++ +
Sbjct: 401 HQKLVNHVAFSPDGRYIVSASFDNSIKLWD--GRDGKFISTFRGHVA-SVYQVAWSSDCR 457
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
LL + + D ++++DV ++ GH D + +S DGK + S G D +R+W
Sbjct: 458 LLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 114 (45.2 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 31/150 (20%), Positives = 68/150 (45%)
Query: 152 NKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR 211
++++ G+ + + ++W+ T+ ++ KG P +V+A G D I + + +
Sbjct: 157 SRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPK 216
Query: 212 YDEELVTFTHSMRGAVTALAFSS------DGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ L +T+L++ +P LAS + G I IW+ R Q +
Sbjct: 217 SGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTM-S 275
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
H N++ + + + +L S S D ++++W
Sbjct: 276 GHTNSVSCVKW-GGQGLLYSGSHDRTVRVW 304
Score = 98 (39.6 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 26/108 (24%), Positives = 54/108 (50%)
Query: 486 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV---NG----LLATVADDLV 538
N L +S Y I +D G+ + E ++ Y ++ NG ++ T +DD
Sbjct: 324 NHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALEN-YEKICKKNGNSEEMMVTASDDYT 382
Query: 539 IRLFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ L++ + + + + + GH + FS DG++++S+ D S+++WD
Sbjct: 383 MFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWD 430
Score = 80 (33.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/105 (23%), Positives = 49/105 (46%)
Query: 484 STNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVIRL 541
++ +M++A + +W+ K +R LV V +G + + + D I+L
Sbjct: 369 NSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKL 428
Query: 542 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+D + + F GH + +S D + L+S D +L++WDV
Sbjct: 429 WDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDV 473
Score = 60 (26.2 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 23/85 (27%), Positives = 35/85 (41%)
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASA-DNSIKMWIFDTTDGDPRLLRFRSGHSAP 316
R S I H + I+ F + M A DN+ ++W DT P + GH
Sbjct: 134 RSSSAIA-GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQT--P--MHTLKGHYNW 188
Query: 317 PLCIRFYANGRHILSAGQDRAFRLF 341
LC+ + +G I + D RL+
Sbjct: 189 VLCVSWSPDGEVIATGSMDNTIRLW 213
Score = 53 (23.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 33/160 (20%), Positives = 65/160 (40%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYE-FKGWGXXXXXXXXXPALDV-------VAVGCSDGKI 205
+ GS + +++LW+ + + L + +G P V +A DG I
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 206 HVHNVRYDEELVTFTHSMRGAVTALAFSS-DGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ +D ++M G +++ GQ LL SG+ + +W++ + I
Sbjct: 261 KI----WDTVSRVCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINIL 316
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDP 304
++H H+ N +S S D ++++ FD T P
Sbjct: 317 KSH------AHW-VNH---LSLSTDYALRIGAFDHTGKKP 346
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 137 (53.3 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 66/268 (24%), Positives = 117/268 (43%)
Query: 87 ATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
AT HS V L G + S D + +W + E GH F +C
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS----FVNSC- 158
Query: 145 MHPDTYLNKVI-VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+P +++ GS +G+++LW+I K + F+ + +++ G D
Sbjct: 159 -YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGI-DN 216
Query: 204 KIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLE----K 256
I V ++R ++ T++MRG +VT L+ SS+G LL S A + +W++ K
Sbjct: 217 DIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVWDVRPFAPK 271
Query: 257 RRLQSVIR-EAH--DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
R + + H + ++ + + + + SAD + +W DTT R+L GH
Sbjct: 272 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR--RVLYKLPGH 327
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLF 341
+ + F+ + ILSA D+ RL+
Sbjct: 328 AGSINEVAFHPDEPIILSASSDK--RLY 353
Score = 130 (50.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 39/178 (21%), Positives = 80/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ + + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 100 (40.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRVLYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 523
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 524 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 584 WDV 586
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 320
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 321 RFYANGRHILSAGQDR 336
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>CGD|CAL0000293 [details] [associations]
symbol:UTP13 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0034388
"Pwp2p-containing subcomplex of 90S preribosome" evidence=IEA]
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0000472
"endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA
from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000293 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555
RefSeq:XP_720576.1 RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1
STRING:Q5AGB1 GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 130 (50.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 56/238 (23%), Positives = 105/238 (44%)
Query: 392 VVTCHMDTAQAYVWR----LQNFVLGEHILRPCPENPTAVKACTISACGN---FAVLGTA 444
+ T D +A +WR LQ+F E R + A+ A ++S N F V G+
Sbjct: 396 IATASKDN-EARLWRWNGELQDF---EPFAR-FQGHAGAITAISLSKSQNEPKFLVTGST 450
Query: 445 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF- 503
I+++ + + + S + SE + AH+ ++ + + +A Y KVW
Sbjct: 451 DLTIKKWKIPN--TPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTD 508
Query: 504 KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 563
G + L I +++ + L+ T + D I+++ ++ + EGHT+ +
Sbjct: 509 SGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 564 -CFSEDGKWLLSSGMDGSLRIWDVILARQIDAI-HVDVSITALSLSPNMDVLATAHVD 619
F+ + LLS G DG +++WD I ++ + D I A+ L + + TA D
Sbjct: 569 KFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADAD 626
Score = 105 (42.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 147 PD-TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKI 205
PD +YL + SQ L++++++ + FK + A G SDG I
Sbjct: 70 PDGSYLAMI---SQSQLLRIFDLNKGSVIKNFK-LPSPVYISSVDSTSSLFAFGGSDGVI 125
Query: 206 HVHNVRYDEELVTFTHSMRG---AVTALAFSSD--GQPL-LASGASSGVISIWNLEKRRL 259
V +D E THS++G + +L F + Q LASG + G + IW+L KRR
Sbjct: 126 TV----WDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRC 181
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSI 292
+++ H+ A+ + F + + +S DN +
Sbjct: 182 IHTLKD-HNTAVRGVGFDQDGDLFISGGRDNVV 213
Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+K V N LLA + +R+ D+ +R +EGHTD + S DGKW+ ++ D
Sbjct: 344 IKYVGPEFN-LLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKD 402
Query: 579 GSLRIW 584
R+W
Sbjct: 403 NEARLW 408
Score = 92 (37.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE-PVLMSASADNSIKMWIF 297
L+ +G+ I +W+L + + E H N++ + FF E P L+S AD IK+W
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTL-EGHTNSVQRVKFFNREHPQLLSCGADGLIKLW-- 590
Query: 298 DTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
D G+ +++ H + +G + +A D
Sbjct: 591 DYKQGE--IIKSLDNHDQRIWAMDLKNDGEYFTTADAD 626
Score = 88 (36.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV--YHRVNGLLATVADDLVIRLFDVV 545
L+++ IKVW K E + V+ V ++R + L + D +I+L+D
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYK 593
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+++ + H RI DG++ ++ DG L W
Sbjct: 594 QGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 81 (33.6 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 40/202 (19%), Positives = 85/202 (42%)
Query: 69 TFAAYGNHIAVVKRAHQVATWSRHSAKV--NLLLLFGEHILSIDIDGNMFIWAFKGIEEN 126
T G+++A++ ++ + + + V N L +I S+D ++F AF G +
Sbjct: 67 TITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLF--AFGG-SDG 123
Query: 127 LAPV-----GHV--KLDDKFTPTCIMHPDTYLN----KVIVGSQEGSLQLWNISTKKKLY 175
+ V G+V L T C + LN ++ G G++++W++ ++ ++
Sbjct: 124 VITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIH 183
Query: 176 EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSS- 234
K D+ G D + ++N + + + TF + + A F S
Sbjct: 184 TLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFP--INEQIEAAGFVSL 241
Query: 235 -DGQPLLASGASSGVISIWNLE 255
D + +G S V+ IW+++
Sbjct: 242 IDDRQYFYTGGSENVLKIWDIK 263
Score = 78 (32.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 206 HVHNVRYDEELVTFTHSMR-----GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ 260
H H D+E+V F R G + + + LLA +S + I ++EK L+
Sbjct: 315 HGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKP-LE 373
Query: 261 SVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIF--DTTDGDPRLLRFRSGHS 314
+ E H + + ++ + + +AS DN ++W + + D +P RF+ GH+
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEP-FARFQ-GHA 427
Score = 69 (29.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 530 LATVADDLVIRLF----DVVALRMVRKFEGHTDRITDFCFSE---DGKWLLSSGMDGSLR 582
+AT + D RL+ ++ +F+GH IT S+ + K+L++ D +++
Sbjct: 396 IATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIK 455
Query: 583 IW-------DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
W ++ + D I ++ +SPN + ATA D+ G +W
Sbjct: 456 KWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGK-VW 505
Score = 47 (21.6 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
V R A + II+ + + A A NS + I D P LR GH+ +
Sbjct: 331 VKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEK--PLELRVYEGHTDILNAVD 388
Query: 322 FYANGRHILSAGQDRAFRLF 341
+G+ I +A +D RL+
Sbjct: 389 VSTDGKWIATASKDNEARLW 408
Score = 43 (20.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS-LHFFANEPVL 283
G +A +S+G+ LLA+ + VI I NL+ + + + D +I+ L + L
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVI-ITNLDTNEI--IYKIPGDGEVITNLTITPDGSYL 75
Query: 284 MSASADNSIKMWIFDTTDG 302
S ++ IFD G
Sbjct: 76 AMISQSQLLR--IFDLNKG 92
>UNIPROTKB|Q5AGB1 [details] [associations]
symbol:CaO19.11744 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000293
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
EMBL:AACQ01000021 EMBL:AACQ01000022 KO:K14555 RefSeq:XP_720576.1
RefSeq:XP_720704.1 ProteinModelPortal:Q5AGB1 STRING:Q5AGB1
GeneID:3637636 GeneID:3637718 KEGG:cal:CaO19.11744
KEGG:cal:CaO19.4268 Uniprot:Q5AGB1
Length = 799
Score = 130 (50.8 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 56/238 (23%), Positives = 105/238 (44%)
Query: 392 VVTCHMDTAQAYVWR----LQNFVLGEHILRPCPENPTAVKACTISACGN---FAVLGTA 444
+ T D +A +WR LQ+F E R + A+ A ++S N F V G+
Sbjct: 396 IATASKDN-EARLWRWNGELQDF---EPFAR-FQGHAGAITAISLSKSQNEPKFLVTGST 450
Query: 445 GGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF- 503
I+++ + + + S + SE + AH+ ++ + + +A Y KVW
Sbjct: 451 DLTIKKWKIPN--TPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGKVWQTD 508
Query: 504 KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 563
G + L I +++ + L+ T + D I+++ ++ + EGHT+ +
Sbjct: 509 SGETIGVLKGHKRGLWDINFYKFDKLIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRV 568
Query: 564 -CFSEDGKWLLSSGMDGSLRIWDVILARQIDAI-HVDVSITALSLSPNMDVLATAHVD 619
F+ + LLS G DG +++WD I ++ + D I A+ L + + TA D
Sbjct: 569 KFFNREHPQLLSCGADGLIKLWDYKQGEIIKSLDNHDQRIWAMDLKNDGEYFTTADAD 626
Score = 105 (42.0 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 147 PD-TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKI 205
PD +YL + SQ L++++++ + FK + A G SDG I
Sbjct: 70 PDGSYLAMI---SQSQLLRIFDLNKGSVIKNFK-LPSPVYISSVDSTSSLFAFGGSDGVI 125
Query: 206 HVHNVRYDEELVTFTHSMRG---AVTALAFSSD--GQPL-LASGASSGVISIWNLEKRRL 259
V +D E THS++G + +L F + Q LASG + G + IW+L KRR
Sbjct: 126 TV----WDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRC 181
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSI 292
+++ H+ A+ + F + + +S DN +
Sbjct: 182 IHTLKD-HNTAVRGVGFDQDGDLFISGGRDNVV 213
Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+K V N LLA + +R+ D+ +R +EGHTD + S DGKW+ ++ D
Sbjct: 344 IKYVGPEFN-LLAMATNSPALRIVDIEKPLELRVYEGHTDILNAVDVSTDGKWIATASKD 402
Query: 579 GSLRIW 584
R+W
Sbjct: 403 NEARLW 408
Score = 92 (37.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 239 LLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE-PVLMSASADNSIKMWIF 297
L+ +G+ I +W+L + + E H N++ + FF E P L+S AD IK+W
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTL-EGHTNSVQRVKFFNREHPQLLSCGADGLIKLW-- 590
Query: 298 DTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
D G+ +++ H + +G + +A D
Sbjct: 591 DYKQGE--IIKSLDNHDQRIWAMDLKNDGEYFTTADAD 626
Score = 88 (36.0 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV--YHRVNGLLATVADDLVIRLFDVV 545
L+++ IKVW K E + V+ V ++R + L + D +I+L+D
Sbjct: 534 LIVTGSGDKTIKVWSLLDFSCKKTLEGHTNSVQRVKFFNREHPQLLSCGADGLIKLWDYK 593
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+++ + H RI DG++ ++ DG L W
Sbjct: 594 QGEIIKSLDNHDQRIWAMDLKNDGEYFTTADADGKLSFW 632
Score = 81 (33.6 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 40/202 (19%), Positives = 85/202 (42%)
Query: 69 TFAAYGNHIAVVKRAHQVATWSRHSAKV--NLLLLFGEHILSIDIDGNMFIWAFKGIEEN 126
T G+++A++ ++ + + + V N L +I S+D ++F AF G +
Sbjct: 67 TITPDGSYLAMISQSQLLRIFDLNKGSVIKNFKLPSPVYISSVDSTSSLF--AFGG-SDG 123
Query: 127 LAPV-----GHV--KLDDKFTPTCIMHPDTYLN----KVIVGSQEGSLQLWNISTKKKLY 175
+ V G+V L T C + LN ++ G G++++W++ ++ ++
Sbjct: 124 VITVWDIENGYVTHSLKGHGTTICSLTFHGELNSQDWRLASGDTMGTVKIWDLVKRRCIH 183
Query: 176 EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSS- 234
K D+ G D + ++N + + + TF + + A F S
Sbjct: 184 TLKDHNTAVRGVGFDQDGDLFISGGRDNVVIIYNTKNFKTINTFP--INEQIEAAGFVSL 241
Query: 235 -DGQPLLASGASSGVISIWNLE 255
D + +G S V+ IW+++
Sbjct: 242 IDDRQYFYTGGSENVLKIWDIK 263
Score = 78 (32.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 29/116 (25%), Positives = 54/116 (46%)
Query: 206 HVHNVRYDEELVTFTHSMR-----GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ 260
H H D+E+V F R G + + + LLA +S + I ++EK L+
Sbjct: 315 HGHGHGQDDEIVEFPIVKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEKP-LE 373
Query: 261 SVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIF--DTTDGDPRLLRFRSGHS 314
+ E H + + ++ + + +AS DN ++W + + D +P RF+ GH+
Sbjct: 374 LRVYEGHTDILNAVDVSTDGKWIATASKDNEARLWRWNGELQDFEP-FARFQ-GHA 427
Score = 69 (29.3 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 26/111 (23%), Positives = 50/111 (45%)
Query: 530 LATVADDLVIRLF----DVVALRMVRKFEGHTDRITDFCFSE---DGKWLLSSGMDGSLR 582
+AT + D RL+ ++ +F+GH IT S+ + K+L++ D +++
Sbjct: 396 IATASKDNEARLWRWNGELQDFEPFARFQGHAGAITAISLSKSQNEPKFLVTGSTDLTIK 455
Query: 583 IW-------DVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
W ++ + D I ++ +SPN + ATA D+ G +W
Sbjct: 456 KWKIPNTPNSIVKTSEYTRRAHDKDINSIDVSPNDEYFATASYDKLGK-VW 505
Score = 47 (21.6 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
Identities = 22/80 (27%), Positives = 34/80 (42%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
V R A + II+ + + A A NS + I D P LR GH+ +
Sbjct: 331 VKRIAGNQGIIADIKYVGPEFNLLAMATNSPALRIVDIEK--PLELRVYEGHTDILNAVD 388
Query: 322 FYANGRHILSAGQDRAFRLF 341
+G+ I +A +D RL+
Sbjct: 389 VSTDGKWIATASKDNEARLW 408
Score = 43 (20.2 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS-LHFFANEPVL 283
G +A +S+G+ LLA+ + VI I NL+ + + + D +I+ L + L
Sbjct: 19 GGTSASISTSNGELLLATPLNEDVI-ITNLDTNEI--IYKIPGDGEVITNLTITPDGSYL 75
Query: 284 MSASADNSIKMWIFDTTDG 302
S ++ IFD G
Sbjct: 76 AMISQSQLLR--IFDLNKG 92
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 182 (69.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 42/156 (26%), Positives = 79/156 (50%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V + +S+ +++ G +++WD + + L++ S+ + +H + LA
Sbjct: 62 HTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+DV V +++GHT + FS DGKWL S+ D ++++WD+I +
Sbjct: 122 SGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKM 181
Query: 592 IDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 626
I S + + PN +LA+ D+ V LW
Sbjct: 182 ITEFTSHTSAVNVVQFHPNEYLLASGSADRT-VKLW 216
Score = 176 (67.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 64/254 (25%), Positives = 112/254 (44%)
Query: 92 HSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
HS+ V+ L+L G + + D + IWA ++ GH CI
Sbjct: 19 HSSNVSSLVLGKSSGRLLATGGEDCRVNIWAVSKPNCIMSLTGHTS-----AVGCIQFNS 73
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
+ +V+ GS GSL+LW++ K L G P + +A G D I +
Sbjct: 74 SE-ERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLW 132
Query: 209 NVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
+VR + + H+ AV LAFS DG+ LAS + + +W+L ++ + +H
Sbjct: 133 DVRRKGCVFRYKGHTQ--AVRCLAFSPDGK-WLASASDDSTVKLWDLIAGKMITEFT-SH 188
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 327
+A+ + F NE +L S SAD ++K+W + + ++ G + + F +G
Sbjct: 189 TSAVNVVQFHPNEYLLASGSADRTVKLWDLEKFN----MIGSSEGETGVVRSVLFNPDGS 244
Query: 328 HILSAGQDRAFRLF 341
+ S G + R++
Sbjct: 245 CLYS-GSENTLRVY 257
Score = 141 (54.7 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 42/160 (26%), Positives = 81/160 (50%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ V +++ T H+ AV + F+S + ++A G+ SG + +W+
Sbjct: 35 LLATGGEDCRVNIWAVSKPNCIMSLTGHT--SAVGCIQFNSSEERVVA-GSLSGSLRLWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H +I SL F L S S D++IK+W D + R++ GH
Sbjct: 92 LEAAKILRTLM-GHKASISSLDFHPMGEYLASGSVDSNIKLW--DVRRKGC-VFRYK-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
+ C+ F +G+ + SA D +L+ +I + E +
Sbjct: 147 TQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFT 186
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 56/218 (25%), Positives = 94/218 (43%)
Query: 471 YAHNGEVVGVAC---DSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRV 526
+ + G V C + SA +K+WD + + + S V +V +H
Sbjct: 141 FRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSAVNVVQFHPN 200
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
LLA+ + D ++L+D+ M+ EG T + F+ DG L S G + +LR++
Sbjct: 201 EYLLASGSADRTVKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSCLYS-GSENTLRVYGW 259
Query: 587 ILARQIDAIHVDVS-ITALSLSPN-MDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASG 644
R D +HV ++ L++S N M ++ +H + + + +NR SG S I
Sbjct: 260 EPDRCFDVVHVGWGKVSDLAISNNQMIAVSYSHTNVSWYVVDLNRVKKSG-SVIQGLIQD 318
Query: 645 KEIVSVKMPSVSSVEGCQ-DENSSQPDVHRTDRVPKDS 681
K I P+ SS G N +P T + K S
Sbjct: 319 KPI-----PAPSSALGTTLRRNYERPTTSCTGQEMKQS 351
Score = 126 (49.4 bits), Expect = 0.00036, P = 0.00036
Identities = 45/189 (23%), Positives = 88/189 (46%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G ++ + +W +S + G + + V G G + + ++ + L
Sbjct: 39 GGEDCRVNIWAVSKPNCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + ++++L F G+ LASG+ I +W++ RR V R + H A+ L
Sbjct: 99 RTLM-GHKASISSLDFHPMGE-YLASGSVDSNIKLWDV--RRKGCVFRYKGHTQAVRCLA 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ- 334
F + L SAS D+++K+W D G + F S H++ ++F+ N ++L++G
Sbjct: 155 FSPDGKWLASASDDSTVKLW--DLIAGK-MITEFTS-HTSAVNVVQFHPN-EYLLASGSA 209
Query: 335 DRAFRLFSV 343
DR +L+ +
Sbjct: 210 DRTVKLWDL 218
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 150 (57.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 50/207 (24%), Positives = 92/207 (44%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
MH T ++ SQ+G L +W+ T K++ P+ + VA G D
Sbjct: 61 MHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 205 IHVHNVRYDEELVTFTHSMR---GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+++++ E V + + G ++ F D + +SG ++ ++W++E + Q
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT--CALWDIETGQ-QK 177
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H +SL + + +S + D S K+W D +G R F +GH + I
Sbjct: 178 TVFVGHTGDCMSLAVSPDFRLFISGACDASAKLW--DVREGTCRQT-F-TGHESDINAIC 233
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQ 348
F+ NG I + D + RLF + DQ+
Sbjct: 234 FFPNGEAICTGSDDASCRLFDLRADQE 260
Score = 143 (55.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 49/208 (23%), Positives = 91/208 (43%)
Query: 90 SRHSAKVNLL-LLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S H+ ++ L +I++ D +W + ++ VGH D + + PD
Sbjct: 140 SAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT--GDCMS--LAVSPD 195
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
L I G+ + S +LW++ F G P + + G D +
Sbjct: 196 FRL--FISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLF 253
Query: 209 NVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
++R D+EL T+ H S+ +T++AFS G+ LL +G ++W+ K ++ H
Sbjct: 254 DLRADQELTTYAHESIICGITSVAFSLSGR-LLFAGYDDFNCNVWDSMKCERVGIL-SGH 311
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
DN + L A+ + + S D+ +K+W
Sbjct: 312 DNRVSCLGVTADGMAVATGSWDSFLKIW 339
Score = 72 (30.4 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + LL DD ++D + V GH +R++ + DG + +
Sbjct: 271 CGITSVAFSLSGRLLFAGYDDFNCNVWDSMKCERVGILSGHDNRVSCLGVTADGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 331 SWDSFLKIWN 340
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 135 (52.6 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKI-VYH 524
+E+ H G V+ A + S K+W F+ + + + V+ +
Sbjct: 1079 TEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFS 1138
Query: 525 RVNGLLATVADDLVIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSS 575
N LLAT D IR++D++ ++ H +TD FS D K L+SS
Sbjct: 1139 PSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS 1198
Query: 576 GMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGVYLWVNR 629
G G L+ WDV + + + ++ ++ +SPN DV T VD G+ L+V R
Sbjct: 1199 G--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVT--VDNLGI-LYVLR 1248
Score = 104 (41.7 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISL 274
LV H R AV FS D Q + + GA + ++ E RL + AHD+ I+
Sbjct: 608 LVVRPH--RDAVYHACFSRDRQRIASCGADK-TLQVFKAESGERLLEI--SAHDDEILCC 662
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAG 333
F A++ + + SAD +K+W ++ G + L H+ C +F G+++L+
Sbjct: 663 TFSADDKYVATCSADKKVKIW--NSRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATC 718
Query: 334 QDRAFRLFSVIQDQQSRELSQRHV 357
D + ++D+ R HV
Sbjct: 719 SDDTYIKLWDLKDKYCRNTMFGHV 742
Score = 102 (41.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 486 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN---GLLATVADDLVIRLF 542
N+ ++S + G +KVW+ K+ + C ++ V+ ++ + D +++
Sbjct: 1057 NSKLLSWSFDGTVKVWNITTG--KTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1114
Query: 543 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVILARQI---DAIHVD 598
+ ++ + +GH + FS K LL++G D G +RIWD++ + ++ VD
Sbjct: 1115 SFESSSVLHELKGHEACVRCSAFSPSNK-LLATGDDKGDIRIWDILTGELLHFCSSVTVD 1173
Query: 599 VS-------ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 650
+T LS SP+ +L V G W + + +G+S Y +G + S+
Sbjct: 1174 EEEPTHGGWVTDLSFSPDSKML----VSSGGYLKWWD--VTTGESLQTFYTNGTNLKSI 1226
Score = 100 (40.3 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD-GQPLLASGASSGVISIWNL 254
VA +D K+ + N R + L + V F++ GQ LLA+ + I +W+L
Sbjct: 671 VATCSADKKVKIWNSRTGKCLYVYEEHTE-QVNCCQFNNRRGQYLLATCSDDTYIKLWDL 729
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+ + ++ + H NA+ F N+ + S S D ++K+W
Sbjct: 730 KDKYCRNTMF-GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 769
Score = 94 (38.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 495 HGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 553
+G IKV GR L SR S+ + L + A D VI++++ V
Sbjct: 984 NGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-L 1042
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR-QID-AIHVDVSITALSLSPNMD 611
+GH + I DF F E+ K LLS DG++++W++ + + D A H ++ + ++SP+
Sbjct: 1043 KGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGS 1100
Query: 612 VLATAHVDQNGVYLW 626
++ D+ +W
Sbjct: 1101 RFSSTSADKTAK-IW 1114
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI- 587
L+A I L+++ +L V GHT + FS DG L+S D ++RIW+
Sbjct: 853 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 912
Query: 588 LARQIDAI 595
+ + DA+
Sbjct: 913 VCKSSDAV 920
Score = 79 (32.9 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 39/164 (23%), Positives = 67/164 (40%)
Query: 201 SDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ 260
+D + V E L+ + + + FS+D + +A+ ++ + IWN +
Sbjct: 634 ADKTLQVFKAESGERLLEIS-AHDDEILCCTFSADDK-YVATCSADKKVKIWNSRTGKCL 691
Query: 261 SVIREAHDNAIISLHFF--ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH-SAPP 317
V E H + F + +L + S D IK+W D D R F GH +A
Sbjct: 692 YVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKLW--DLKDKYCRNTMF--GHVNAVS 746
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRA 361
C RF N +I S D +L++V + R + + + A
Sbjct: 747 HC-RFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 789
Score = 73 (30.8 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 38/196 (19%), Positives = 80/196 (40%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ K G P D +A +DG + + NV EL
Sbjct: 719 SDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELR 778
Query: 218 TFTHS--MRGA----------VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
T R A V ++S +L + + ++++ L + +
Sbjct: 779 TIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILV--VAKNKLLLFDVTTSNLLTQVII 836
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
+H + I F A + ++ A + SI++W + ++ R GH++ C+ F ++
Sbjct: 837 SHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSLS---KVADCR-GHTSWVHCVTFSSD 892
Query: 326 GRHILSAGQDRAFRLF 341
G L++ +D+ R++
Sbjct: 893 GSLFLTSSEDQTIRIW 908
Score = 62 (26.9 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 28/141 (19%), Positives = 58/141 (41%)
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAII 272
+ ++ T + S D + A G +G I + L + R L S REA+ ++
Sbjct: 953 DSIIMQTEPQESLICCCCLSEDLK-FAAFGQENGAIKVLRLLDGRVLTS--REAYRTSVQ 1009
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
F + L+S++ D I++W + + F GH F N + +LS
Sbjct: 1010 HCRFTTDCQTLISSAHDAVIQVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK-LLSW 1063
Query: 333 GQDRAFRLFSVIQDQQSRELS 353
D +++++ + ++ +
Sbjct: 1064 SFDGTVKVWNITTGKTEKDFA 1084
Score = 52 (23.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 36/171 (21%), Positives = 67/171 (39%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSL 163
+ I S D + ++ + E L H DD+ D Y V S + +
Sbjct: 627 QRIASCGADKTLQVFKAESGERLLEISAH---DDEILCCTFSADDKY---VATCSADKKV 680
Query: 164 QLWNISTKKKLYEFKGWGXXXXXXXXXPAL-DVVAVGCSDGK-IHVHNVRYDEELVTFTH 221
++WN T K LY ++ + CSD I + +++ D+
Sbjct: 681 KIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK-DKYCRNTMF 739
Query: 222 SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSV-IREAHDNA 270
AV+ FS + +AS ++ G + +WN+ L+++ I++ NA
Sbjct: 740 GHVNAVSHCRFSPNDD-YIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 789
Score = 50 (22.7 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 29/122 (23%), Positives = 48/122 (39%)
Query: 69 TFAAYGNHIAVVKRAHQVATW-SR----------HSAKVNLLLLF---GEHILSIDIDGN 114
TF+A ++A +V W SR H+ +VN G+++L+ D
Sbjct: 663 TFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDT 722
Query: 115 MF-IWAFKGIEENLAPVGHVKLDDKFTPTCIMHP-DTYLNKVIVGSQEGSLQLWNISTKK 172
+W K GHV C P D Y+ S +G+++LWN+ +
Sbjct: 723 YIKLWDLKDKYCRNTMFGHVNA----VSHCRFSPNDDYIASC---STDGTVKLWNVHSAN 775
Query: 173 KL 174
+L
Sbjct: 776 EL 777
Score = 46 (21.3 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKG 179
V V S++LWNI + K+ + +G
Sbjct: 854 VAVALSHCSIELWNIKSLSKVADCRG 879
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 174 (66.3 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 69/263 (26%), Positives = 130/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ N ++ S +
Sbjct: 31 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDS--NLLVSASDD 82
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W++S+ K L KG P +++ G D + + +V+ + L T
Sbjct: 83 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 142
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 143 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 197
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S
Sbjct: 198 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSG 251
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ Q++E+ Q+
Sbjct: 252 SEDNLVYIWNL----QTKEIVQK 270
Score = 157 (60.3 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 31 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 90
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 91 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 150
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 151 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 209
Query: 621 NGVYLW---VNRCM--FSGDSN 637
N + LW +C+ ++G N
Sbjct: 210 NTLKLWDYSKGKCLKTYTGHKN 231
Score = 142 (55.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 143 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 202
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 203 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 262 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 308
Score = 78 (32.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 18 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 73
Query: 327 RHILSAGQDRAFRLFSV 343
++SA D+ +++ V
Sbjct: 74 NLLVSASDDKTLKIWDV 90
Score = 49 (22.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 307 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 11 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 58
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 137 (53.3 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 65/268 (24%), Positives = 117/268 (43%)
Query: 87 ATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
AT HS V L G + S D + +W + E GH F +C
Sbjct: 103 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS----FVNSC- 157
Query: 145 MHPDTYLNKVI-VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+P +++ GS +G+++LW+I K + F+ + +++ G D
Sbjct: 158 -YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DN 215
Query: 204 KIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLE----K 256
I V ++R ++ T++MRG +VT L+ SS+G LL S A + +W++ K
Sbjct: 216 DIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVWDVRPFAPK 270
Query: 257 RRLQSVIR-EAH--DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
R + + H + ++ + + + + SAD + +W DTT R+L GH
Sbjct: 271 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR--RILYKLPGH 326
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLF 341
+ + F+ + I+SA D+ RL+
Sbjct: 327 AGSINEVAFHPDEPIIISASSDK--RLY 352
Score = 129 (50.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ S SP+ +A D+ VY+W
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRF-VYVW 312
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 45 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 104
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 163
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 220
Score = 99 (39.9 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 254
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 315 TSRRILYKLPGHAG-SINEVAFHPDEPIIISASSDKR-LYM 353
Score = 95 (38.5 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 67 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 126 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 152
Score = 75 (31.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 24/123 (19%), Positives = 51/123 (41%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 523
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 234 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 293
Query: 524 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
+A + D + ++D + R++ K GH I + F D ++S+ D L +
Sbjct: 294 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYM 353
Query: 584 WDV 586
++
Sbjct: 354 GEI 356
Score = 73 (30.8 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ NG + SAG DR L++V D
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 98
Score = 65 (27.9 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 320
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 60 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 115
Query: 321 RFYANGRHILSAGQDR 336
+ +G + SA D+
Sbjct: 116 HYNTDGSMLFSASTDK 131
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 66/268 (24%), Positives = 117/268 (43%)
Query: 87 ATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
AT HS V L G + S D + +W + E GH F +C
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS----FVNSC- 158
Query: 145 MHPDTYLNKVI-VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+P +++ GS +G+++LW+I K + F+ + +++ G D
Sbjct: 159 -YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DN 216
Query: 204 KIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLE----K 256
I V ++R ++ T++MRG +VT L+ SS+G LL S A + +W++ K
Sbjct: 217 DIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVWDVRPFAPK 271
Query: 257 RRLQSVIR-EAH--DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
R + + H + ++ + + + + SAD + +W DTT R+L GH
Sbjct: 272 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR--RILYKLPGH 327
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLF 341
+ + F+ + ILSA D+ RL+
Sbjct: 328 AGSINEVAFHPDEPIILSASSDK--RLY 353
Score = 129 (50.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 99 (39.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRILYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 523
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 524 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 584 WDV 586
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 320
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 321 RFYANGRHILSAGQDR 336
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 66/268 (24%), Positives = 117/268 (43%)
Query: 87 ATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
AT HS V L G + S D + +W + E GH F +C
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS----FVNSC- 158
Query: 145 MHPDTYLNKVI-VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+P +++ GS +G+++LW+I K + F+ + +++ G D
Sbjct: 159 -YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DN 216
Query: 204 KIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLE----K 256
I V ++R ++ T++MRG +VT L+ SS+G LL S A + +W++ K
Sbjct: 217 DIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVWDVRPFAPK 271
Query: 257 RRLQSVIR-EAH--DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
R + + H + ++ + + + + SAD + +W DTT R+L GH
Sbjct: 272 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR--RILYKLPGH 327
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLF 341
+ + F+ + ILSA D+ RL+
Sbjct: 328 AGSINEVAFHPDEPIILSASSDK--RLY 353
Score = 129 (50.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 286
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 99 (39.9 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRILYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 523
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSW 294
Query: 524 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 584 WDV 586
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 320
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 321 RFYANGRHILSAGQDR 336
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 138 (53.6 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 66/268 (24%), Positives = 117/268 (43%)
Query: 87 ATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
AT HS V L G + S D + +W + E GH F +C
Sbjct: 104 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS----FVNSC- 158
Query: 145 MHPDTYLNKVI-VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+P +++ GS +G+++LW+I K + F+ + +++ G D
Sbjct: 159 -YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DN 216
Query: 204 KIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLE----K 256
I V ++R ++ T++MRG +VT L+ SS+G LL S A + +W++ K
Sbjct: 217 DIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVWDVRPFAPK 271
Query: 257 RRLQSVIR-EAH--DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
R + + H + ++ + + + + SAD + +W DTT R+L GH
Sbjct: 272 ERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR--RILYKLPGH 327
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLF 341
+ + F+ + ILSA D+ RL+
Sbjct: 328 AGSINEVAFHPDEPIILSASSDK--RLY 353
Score = 129 (50.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFE 286
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ S SP+ +A D+ VY+W
Sbjct: 287 KNLLRCSWSPDGSKIAAGSADRF-VYVW 313
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 46 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 105
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 102 (41.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 40/161 (24%), Positives = 70/161 (43%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R VR F+G+ C +S DG + + D + +WD
Sbjct: 256 MDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 315
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H SI ++ P+ ++ +A D+ +Y+
Sbjct: 316 TSRRILYKLPGHAG-SINEVAFHPDEPIILSASSDKR-LYM 354
Score = 95 (38.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 77 (32.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 25/123 (20%), Positives = 51/123 (41%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---------EVGCSLVKIVY 523
H V G++ S + ++S ++VWD + K R +L++ +
Sbjct: 235 HADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSW 294
Query: 524 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
+A + D + ++D + R++ K GH I + F D +LS+ D L +
Sbjct: 295 SPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYM 354
Query: 584 WDV 586
++
Sbjct: 355 GEI 357
Score = 73 (30.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ NG + SAG DR L++V D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 99
Score = 65 (27.9 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 320
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 116
Query: 321 RFYANGRHILSAGQDR 336
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 152 (58.6 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 51/216 (23%), Positives = 94/216 (43%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
MH T ++ SQ+G L +W+ T K++ P+ + VA G D
Sbjct: 61 MHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 205 IHVHNVRYDEELVTFTHSMR---GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+++++ E V + + G ++ F D + +SG ++ ++W++E + Q
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT--CALWDIETGQ-QK 177
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H +SL + + +S + D S K+W D +G R F +GH + I
Sbjct: 178 TVFVGHTGDCMSLAVSPDFKLFISGACDASAKLW--DVREGTCRQT-F-TGHESDINAIC 233
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
F+ NG I + D + RLF + DQ+ S +
Sbjct: 234 FFPNGEAICTGSDDASCRLFDLRADQELTAYSDESI 269
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 48/208 (23%), Positives = 90/208 (43%)
Query: 90 SRHSAKVNLL-LLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S H+ ++ L +I++ D +W + ++ VGH D + + PD
Sbjct: 140 SAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT--GDCMS--LAVSPD 195
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
L I G+ + S +LW++ F G P + + G D +
Sbjct: 196 FKL--FISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLF 253
Query: 209 NVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
++R D+EL ++ S+ +T++AFS G+ LL +G +IW+ K ++ H
Sbjct: 254 DLRADQELTAYSDESIICGITSVAFSLSGR-LLFAGYDDFNCNIWDSMKGERVGIL-SGH 311
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
DN + L A+ + + S D+ +K+W
Sbjct: 312 DNRVSCLGVTADGMAVATGSWDSFLKVW 339
Score = 69 (29.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + LL DD ++D + V GH +R++ + DG + +
Sbjct: 271 CGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L++W+
Sbjct: 331 SWDSFLKVWN 340
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 152 (58.6 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 51/216 (23%), Positives = 94/216 (43%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
MH T ++ SQ+G L +W+ T K++ P+ + VA G D
Sbjct: 61 MHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 205 IHVHNVRYDEELVTFTHSMR---GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+++++ E V + + G ++ F D + +SG ++ ++W++E + Q
Sbjct: 121 CSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT--CALWDIETGQ-QK 177
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H +SL + + +S + D S K+W D +G R F +GH + I
Sbjct: 178 TVFVGHTGDCMSLAVSPDFKLFISGACDASAKLW--DVREGTCRQT-F-TGHESDINAIC 233
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
F+ NG I + D + RLF + DQ+ S +
Sbjct: 234 FFPNGEAICTGSDDASCRLFDLRADQELTAYSDESI 269
Score = 133 (51.9 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 48/208 (23%), Positives = 90/208 (43%)
Query: 90 SRHSAKVNLL-LLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S H+ ++ L +I++ D +W + ++ VGH D + + PD
Sbjct: 140 SAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT--GDCMS--LAVSPD 195
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
L I G+ + S +LW++ F G P + + G D +
Sbjct: 196 FKL--FISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLF 253
Query: 209 NVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
++R D+EL ++ S+ +T++AFS G+ LL +G +IW+ K ++ H
Sbjct: 254 DLRADQELTAYSDESIICGITSVAFSLSGR-LLFAGYDDFNCNIWDSMKGERVGIL-SGH 311
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
DN + L A+ + + S D+ +K+W
Sbjct: 312 DNRVSCLGVTADGMAVATGSWDSFLKVW 339
Score = 69 (29.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + LL DD ++D + V GH +R++ + DG + +
Sbjct: 271 CGITSVAFSLSGRLLFAGYDDFNCNIWDSMKGERVGILSGHDNRVSCLGVTADGMAVATG 330
Query: 576 GMDGSLRIWD 585
D L++W+
Sbjct: 331 SWDSFLKVWN 340
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 158 (60.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 54/219 (24%), Positives = 100/219 (45%)
Query: 142 TCIMHPDTYLNK--VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVG 199
TC+ D LN + GS + +L +W++ + + Y F G P+ ++A G
Sbjct: 23 TCV---DFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASG 79
Query: 200 CSDG--KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKR 257
D +I V NV+ E V H+ V ++ F SDGQ LL + + + +W+ ++
Sbjct: 80 SRDKTVRIWVPNVK-GESTVFRAHT--ATVRSVHFCSDGQ-LLVTASDDKTVKVWSTHRQ 135
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
R + + H N + F + +++SAS D ++K+W D T + + H
Sbjct: 136 RFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRE--CVHSYCEHGGFV 190
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
+ F+ +G I +AG D +++ D ++ L Q +
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVW----DTRTHRLVQHY 225
Score = 148 (57.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 50/243 (20%), Positives = 100/243 (41%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGS 162
+H+ S +D + IW K GH K TC+ P +L + GS++ +
Sbjct: 32 KHLASGSMDSTLMIWHMKPQSRAYRFTGH-----KDAVTCVNFSPSGHL--LASGSRDKT 84
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+++W + K + F+ ++ D + V + L + T
Sbjct: 85 VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQH 144
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+ V FS DG+ L+ S + + +W+ R E H + + F +
Sbjct: 145 INW-VRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECVHSYCE-HGGFVTYVDFHPSGTC 201
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ +A DN++K+W DT RL++ HSA + F+ +G ++++A D ++
Sbjct: 202 IAAAGMDNTVKVW--DTRTH--RLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 343 VIQ 345
+++
Sbjct: 258 LME 260
Score = 136 (52.9 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 531
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLI 245
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 129 (50.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 39/151 (25%), Positives = 70/151 (46%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 529
AH V V S L+++A +KVW + R L S + + V+ +G L
Sbjct: 101 AHTATVRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRL 159
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
+ + +DD ++L+D + V + H +T F G + ++GMD ++++WD
Sbjct: 160 IVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTH 219
Query: 590 RQIDAIHV-DVSITALSLSPNMDVLATAHVD 619
R + + ++ ALS P+ + L TA D
Sbjct: 220 RLVQHYQLHSAAVNALSFHPSGNYLITASSD 250
Score = 123 (48.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 32/141 (22%), Positives = 68/141 (48%)
Query: 488 LMISAGYHGDIKVWDFKGRD-LKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
L++SA +K+WD R+ + S E G + + +H +A D ++++D
Sbjct: 159 LIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRT 218
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS-ITALS 605
R+V+ ++ H+ + F G +L+++ D +L+I D++ R + +H T ++
Sbjct: 219 HRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVA 278
Query: 606 LSPNMDVLATAHVDQNGVYLW 626
S + A+ D+ V +W
Sbjct: 279 FSRTGEYFASGGSDEQ-VMVW 298
Score = 121 (47.7 bits), Expect = 0.00038, P = 0.00038
Identities = 40/182 (21%), Positives = 77/182 (42%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ S + ++++W+ ++ L+ P ++ D + + + +
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWD-KTS 176
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
E V G VT + F G + A+G + + +W+ RL + H A+ +
Sbjct: 177 RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDN-TVKVWDTRTHRLVQHY-QLHSAAVNA 234
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
L F + L++AS+D+++K I D +G RLL GH P + F G + S G
Sbjct: 235 LSFHPSGNYLITASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGG 290
Query: 334 QD 335
D
Sbjct: 291 SD 292
Score = 104 (41.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 37/162 (22%), Positives = 73/162 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRVNG-L 529
H V V + L+ S +++W + KG R + V+ V+ +G L
Sbjct: 60 HKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT--ATVRSVHFCSDGQL 117
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L T +DD ++++ R + H + + FS DG+ ++S+ D ++++WD +
Sbjct: 118 LVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKT-S 176
Query: 590 RQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLWVNR 629
R+ + + +T + P+ +A A +D N V +W R
Sbjct: 177 RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMD-NTVKVWDTR 217
Score = 85 (35.0 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H +A+ + F N L S S D+++ +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 325 NGRHILSAG-QDRAFRLF 341
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 61 (26.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 350
DP L R GH C+ F N +H+ S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM--KPQSR 53
Score = 52 (23.4 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 24/110 (21%), Positives = 39/110 (35%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
+ MD VW + L +H + AV A + GN+ + ++ ++
Sbjct: 202 IAAAGMDNT-VKVWDTRTHRLVQHYQL----HSAAVNALSFHPSGNYLITASSDSTLKIL 256
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
+L G R Y + + H G VA T S G + VW
Sbjct: 257 DLMEG--RLLY------TLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 146 (56.5 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 53/232 (22%), Positives = 95/232 (40%)
Query: 126 NLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKG 179
+L P+G +++ + T MH ++ SQ+G L +W+ T K++
Sbjct: 36 SLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPL 95
Query: 180 WGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGA---VTALAFSSDG 236
P+ VA G D ++N++ E V + + G ++ F D
Sbjct: 96 RSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDN 155
Query: 237 QPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWI 296
Q + +SG S +W++E LQ H +++L +S + D S K+W
Sbjct: 156 QIVTSSGDMS--CGLWDIETG-LQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLW- 211
Query: 297 FDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
D +G + F GH + + F+ NG+ + D RLF + DQ+
Sbjct: 212 -DIREGVCKQT-F-PGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260
Score = 135 (52.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/142 (26%), Positives = 65/142 (45%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ G+ + S +LW+I F G P A G D + ++R D+
Sbjct: 200 VSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQ 259
Query: 215 ELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
EL ++H ++ +T++AFS G+ LLA G ++W+ K +S I HDN +
Sbjct: 260 ELAMYSHDNIICGITSVAFSKSGRLLLA-GYDDFNCNVWDTMKAE-RSGILAGHDNRVSC 317
Query: 274 LHFFANEPVLMSASADNSIKMW 295
L N + + S D+ +++W
Sbjct: 318 LGVTENGMAVATGSWDSFLRVW 339
Score = 75 (31.5 bits), Expect = 4.5e-10, Sum P(2) = 4.5e-10
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ +E+G + +
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGMAVATG 330
Query: 576 GMDGSLRIWD 585
D LR+W+
Sbjct: 331 SWDSFLRVWN 340
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 174 (66.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 69/263 (26%), Positives = 130/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ N ++ S +
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDS--NLLVSASDD 108
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W++S+ K L KG P +++ G D + + +V+ + L T
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 169 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 223
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S
Sbjct: 224 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSG 277
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ Q++E+ Q+
Sbjct: 278 SEDNLVYIWNL----QTKEIVQK 296
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 621 NGVYLW---VNRCM--FSGDSN 637
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 78 (32.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 327 RHILSAGQDRAFRLFSV 343
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 307 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 174 (66.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 69/263 (26%), Positives = 130/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ N ++ S +
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDS--NLLVSASDD 108
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W++S+ K L KG P +++ G D + + +V+ + L T
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 169 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 223
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S
Sbjct: 224 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSG 277
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ Q++E+ Q+
Sbjct: 278 SEDNLVYIWNL----QTKEIVQK 296
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 621 NGVYLW---VNRCM--FSGDSN 637
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 78 (32.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 327 RHILSAGQDRAFRLFSV 343
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 307 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 174 (66.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 69/263 (26%), Positives = 130/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ N ++ S +
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDS--NLLVSASDD 108
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W++S+ K L KG P +++ G D + + +V+ + L T
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 169 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 223
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S
Sbjct: 224 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSG 277
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ Q++E+ Q+
Sbjct: 278 SEDNLVYIWNL----QTKEIVQK 296
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 621 NGVYLW---VNRCM--FSGDSN 637
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 78 (32.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 327 RHILSAGQDRAFRLFSV 343
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 307 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 174 (66.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 69/263 (26%), Positives = 130/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ N ++ S +
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDS--NLLVSASDD 108
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W++S+ K L KG P +++ G D + + +V+ + L T
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 169 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 223
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S
Sbjct: 224 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSG 277
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ Q++E+ Q+
Sbjct: 278 SEDNLVYIWNL----QTKEIVQK 296
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 621 NGVYLW---VNRCM--FSGDSN 637
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 78 (32.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 327 RHILSAGQDRAFRLFSV 343
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 307 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 174 (66.3 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 69/263 (26%), Positives = 130/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ N ++ S +
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDS--NLLVSASDD 108
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W++S+ K L KG P +++ G D + + +V+ + L T
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 169 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 223
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ +GH CI +AN G+ I+S
Sbjct: 224 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTGHKNEKYCI--FANFSVTGGKWIVSG 277
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ Q++E+ Q+
Sbjct: 278 SEDNLVYIWNL----QTKEIVQK 296
Score = 157 (60.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 49/202 (24%), Positives = 95/202 (47%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 621 NGVYLW---VNRCM--FSGDSN 637
N + LW +C+ ++G N
Sbjct: 236 NTLKLWDYSKGKCLKTYTGHKN 257
Score = 142 (55.0 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 44/168 (26%), Positives = 84/168 (50%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+LA D+ ++L+D + ++ + GH ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEIVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 78 (32.5 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 327 RHILSAGQDRAFRLFSV 343
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 307 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 133 (51.9 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKI-VYH 524
+E+ H G V+ A + S K+W F+ + + + V+ +
Sbjct: 1080 TEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFS 1139
Query: 525 RVNGLLATVADDLVIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSS 575
N LLAT D IR++D++ ++ H +TD FS D K L+SS
Sbjct: 1140 PSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS 1199
Query: 576 GMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGVYLWV 627
G G L+ WDV + + + ++ ++ +SPN DV T VD G+ L+V
Sbjct: 1200 G--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVT--VDNLGI-LYV 1247
Score = 104 (41.7 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
Identities = 38/144 (26%), Positives = 65/144 (45%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISL 274
LV H R AV FS D Q + + GA + ++ E RL + AHD+ I+
Sbjct: 609 LVVRPH--RDAVYHACFSRDRQRIASCGADK-TLQVFKAESGERLLEI--SAHDDEILCC 663
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAG 333
F A++ + + SAD +K+W ++ G + L H+ C +F G+++L+
Sbjct: 664 TFSADDKYVATCSADKKVKIW--NSRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATC 719
Query: 334 QDRAFRLFSVIQDQQSRELSQRHV 357
D + ++D+ R HV
Sbjct: 720 SDDTYIKLWDLKDKYCRNTMFGHV 743
Score = 102 (41.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 486 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN---GLLATVADDLVIRLF 542
N+ ++S + G +KVW+ K+ + C ++ V+ ++ + D +++
Sbjct: 1058 NSKLLSWSFDGTVKVWNITTG--KTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1115
Query: 543 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVILARQI---DAIHVD 598
+ ++ + +GH + FS K LL++G D G +RIWD++ + ++ VD
Sbjct: 1116 SFESSSVLHELKGHEACVRCSAFSPSNK-LLATGDDKGDIRIWDILTGELLHFCSSVTVD 1174
Query: 599 VS-------ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 650
+T LS SP+ +L V G W + + +G+S Y +G + S+
Sbjct: 1175 EEEPTHGGWVTDLSFSPDSKML----VSSGGYLKWWD--VTTGESLQTFYTNGTNLKSI 1227
Score = 100 (40.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD-GQPLLASGASSGVISIWNL 254
VA +D K+ + N R + L + V F++ GQ LLA+ + I +W+L
Sbjct: 672 VATCSADKKVKIWNSRTGKCLYVYEEHTE-QVNCCQFNNRRGQYLLATCSDDTYIKLWDL 730
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+ + ++ + H NA+ F N+ + S S D ++K+W
Sbjct: 731 KDKYCRNTMF-GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 770
Score = 94 (38.1 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 495 HGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 553
+G IKV GR L SR S+ + L + A D VI++++ V
Sbjct: 985 NGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-L 1043
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR-QID-AIHVDVSITALSLSPNMD 611
+GH + I DF F E+ K LLS DG++++W++ + + D A H ++ + ++SP+
Sbjct: 1044 KGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGS 1101
Query: 612 VLATAHVDQNGVYLW 626
++ D+ +W
Sbjct: 1102 RFSSTSADKTAK-IW 1115
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI- 587
L+A I L+++ +L V GHT + FS DG L+S D ++RIW+
Sbjct: 854 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 913
Query: 588 LARQIDAI 595
+ + DA+
Sbjct: 914 VCKSSDAV 921
Score = 79 (32.9 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 39/164 (23%), Positives = 67/164 (40%)
Query: 201 SDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ 260
+D + V E L+ + + + FS+D + +A+ ++ + IWN +
Sbjct: 635 ADKTLQVFKAESGERLLEIS-AHDDEILCCTFSADDK-YVATCSADKKVKIWNSRTGKCL 692
Query: 261 SVIREAHDNAIISLHFF--ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH-SAPP 317
V E H + F + +L + S D IK+W D D R F GH +A
Sbjct: 693 YVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKLW--DLKDKYCRNTMF--GHVNAVS 747
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRA 361
C RF N +I S D +L++V + R + + + A
Sbjct: 748 HC-RFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 790
Score = 73 (30.8 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 38/196 (19%), Positives = 80/196 (40%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ K G P D +A +DG + + NV EL
Sbjct: 720 SDDTYIKLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELR 779
Query: 218 TFTHS--MRGA----------VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
T R A V ++S +L + + ++++ L + +
Sbjct: 780 TIEIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILV--VAKNKLLLFDVTTSNLLTQVII 837
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
+H + I F A + ++ A + SI++W + ++ R GH++ C+ F ++
Sbjct: 838 SHHSTIQYCDFCAGDELVAVALSHCSIELWNIKSLS---KVADCR-GHTSWVHCVTFSSD 893
Query: 326 GRHILSAGQDRAFRLF 341
G L++ +D+ R++
Sbjct: 894 GSLFLTSSEDQTIRIW 909
Score = 62 (26.9 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 28/141 (19%), Positives = 58/141 (41%)
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAII 272
+ ++ T + S D + A G +G I + L + R L S REA+ ++
Sbjct: 954 DSIIMQTEPQESLICCCCLSEDLK-FAAFGQENGAIKVLRLLDGRVLTS--REAYRTSVQ 1010
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
F + L+S++ D I++W + + F GH F N + +LS
Sbjct: 1011 HCRFTTDCQTLISSAHDAVIQVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK-LLSW 1064
Query: 333 GQDRAFRLFSVIQDQQSRELS 353
D +++++ + ++ +
Sbjct: 1065 SFDGTVKVWNITTGKTEKDFA 1085
Score = 52 (23.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 36/171 (21%), Positives = 67/171 (39%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSL 163
+ I S D + ++ + E L H DD+ D Y V S + +
Sbjct: 628 QRIASCGADKTLQVFKAESGERLLEISAH---DDEILCCTFSADDKY---VATCSADKKV 681
Query: 164 QLWNISTKKKLYEFKGWGXXXXXXXXXPAL-DVVAVGCSDGK-IHVHNVRYDEELVTFTH 221
++WN T K LY ++ + CSD I + +++ D+
Sbjct: 682 KIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKLWDLK-DKYCRNTMF 740
Query: 222 SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSV-IREAHDNA 270
AV+ FS + +AS ++ G + +WN+ L+++ I++ NA
Sbjct: 741 GHVNAVSHCRFSPNDD-YIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 790
Score = 50 (22.7 bits), Expect = 4.9e-06, Sum P(3) = 4.9e-06
Identities = 29/122 (23%), Positives = 48/122 (39%)
Query: 69 TFAAYGNHIAVVKRAHQVATW-SR----------HSAKVNLLLLF---GEHILSIDIDGN 114
TF+A ++A +V W SR H+ +VN G+++L+ D
Sbjct: 664 TFSADDKYVATCSADKKVKIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDT 723
Query: 115 MF-IWAFKGIEENLAPVGHVKLDDKFTPTCIMHP-DTYLNKVIVGSQEGSLQLWNISTKK 172
+W K GHV C P D Y+ S +G+++LWN+ +
Sbjct: 724 YIKLWDLKDKYCRNTMFGHVNA----VSHCRFSPNDDYIASC---STDGTVKLWNVHSAN 776
Query: 173 KL 174
+L
Sbjct: 777 EL 778
Score = 46 (21.3 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKG 179
V V S++LWNI + K+ + +G
Sbjct: 855 VAVALSHCSIELWNIKSLSKVADCRG 880
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 116 (45.9 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 28/106 (26%), Positives = 54/106 (50%)
Query: 518 LVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
L+ +V +G A+ + D I+L+D + + + F GH + C+S D ++L+S
Sbjct: 396 LINLVSFSPDGRYFASASFDKSIKLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGS 455
Query: 577 MDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQ 620
D +L+IWD+ + + H D + + SP+ D +A+ D+
Sbjct: 456 KDSTLKIWDIKTKKMEKELPGHAD-EVYTVDWSPDGDRVASGSKDR 500
Score = 112 (44.5 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 51/223 (22%), Positives = 96/223 (43%)
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
C PD V VG + ++++W+I T + KG P +A +
Sbjct: 146 CAFSPDGK-GFVSVGG-DTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGME 203
Query: 203 GKIHVHNVRYDEELVTFTHSMRGAVTALA---FSSDGQPL-LASGASSGVISIWNLEK-R 257
G I + + ++L + +T L+ F + + + LAS + I IW+ E +
Sbjct: 204 GDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSSKDSTIRIWDTESCK 263
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
L S+ H ++ L + E ++ S S D +++ +F+TTDG RL+R GH+
Sbjct: 264 NLMSL--SGHTMSVTCLKW-GGEGLIYSGSQDRTVR--VFNTTDG--RLVRVLDGHAHWV 316
Query: 318 LCIRFYANGRHILSAGQ-DRAFRLFSVIQDQQSRELSQRHVAK 359
+ N ++L G D + + +++ Q L + + K
Sbjct: 317 NTLAL--NTDYVLRTGSYDHTGKEYDTLEEAQRVALERYNDVK 357
Score = 111 (44.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 28/98 (28%), Positives = 52/98 (53%)
Query: 491 SAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALR 548
SA + IK+WD + G+ L + R VG ++ ++ + + L + + D ++++D+ +
Sbjct: 411 SASFDKSIKLWDGQSGKFLGNFRGHVG-AVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKK 469
Query: 549 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
M ++ GH D + +S DG + S D LRIW V
Sbjct: 470 MEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 85 (35.0 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 46/196 (23%), Positives = 84/196 (42%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYE-FKGW-----GXXXXXXXXXPALDVVAVGC 200
PD+ K+ EG +++W T K+L KG G P +A
Sbjct: 192 PDS--KKIATAGMEGDIRIWCPQTGKQLGSTLKGHTKFITGLSWEPFHLNPKCVRLASSS 249
Query: 201 SDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRL 259
D I + + + L++ + H+M +VT L + +G L+ SG+ + ++N RL
Sbjct: 250 KDSTIRIWDTESCKNLMSLSGHTM--SVTCLKWGGEG--LIYSGSQDRTVRVFNTTDGRL 305
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 319
V+ + H + + +L + VL + S D++ K +DT + R+ R
Sbjct: 306 VRVL-DGHAHWVNTLAL-NTDYVLRTGSYDHTGKE--YDTLEEAQRVALERYND------ 355
Query: 320 IRFYANGRHILSAGQD 335
++ + G IL +G D
Sbjct: 356 VKAKSKGMEILISGSD 371
Score = 67 (28.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/77 (23%), Positives = 37/77 (48%)
Query: 222 SMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA 278
SM G AV AFS DG+ ++ G + + IW++ ++ H N ++ + +
Sbjct: 135 SMSGHTEAVLNCAFSPDGKGFVSVGGDT-TVRIWDIYTSTPTHTLK-GHTNWVLQVAWSP 192
Query: 279 NEPVLMSASADNSIKMW 295
+ + +A + I++W
Sbjct: 193 DSKKIATAGMEGDIRIW 209
Score = 57 (25.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H G V V S + ++S +K+WD K + ++ V V +G +A
Sbjct: 435 HVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVA 494
Query: 532 TVADDLVIRLFDV 544
+ + D ++R++ V
Sbjct: 495 SGSKDRLLRIWTV 507
Score = 53 (23.7 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 15/75 (20%), Positives = 34/75 (45%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+++ F + +S D ++++W T+ L GH+ L + + +
Sbjct: 139 HTEAVLNCAFSPDGKGFVSVGGDTTVRIWDIYTSTPTHTL----KGHTNWVLQVAWSPDS 194
Query: 327 RHILSAGQDRAFRLF 341
+ I +AG + R++
Sbjct: 195 KKIATAGMEGDIRIW 209
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 141 (54.7 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 48/181 (26%), Positives = 77/181 (42%)
Query: 117 IWAFKGIEENLAPVGHVKLDDKFTPTCIM-HPDTYLNKVIVGSQEGSLQLWNISTKKKLY 175
IW F E+ VGH D K C+ HP L ++ G ++ ++++W+ + + +
Sbjct: 235 IWDFARCTEDNQLVGH-GWDVK----CVSWHPQKSL--IVSGGKDNNIKIWDAKSSQNIT 287
Query: 176 EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSS 234
G + + SD + V ++R +E+ TF H VTALA
Sbjct: 288 TLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKE--VTALALHP 345
Query: 235 DGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKM 294
+ L SG G I W + Q+ I AHD + SL + +L S S D++ K
Sbjct: 346 YHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSNDHTTKF 405
Query: 295 W 295
W
Sbjct: 406 W 406
Score = 132 (51.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 37/165 (22%), Positives = 79/165 (47%)
Query: 472 AHN-GEVVGVACDSTNTLMISAGYHGDIKVWDF----KGRDLKSR-WEVGCSLVKIVYHR 525
AH ++ G++ T+ + S IK+WDF + L W+V C + +H
Sbjct: 206 AHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKC----VSWHP 261
Query: 526 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
L+ + D I+++D + + + GH ++ ++++G W++S+ D L+++D
Sbjct: 262 QKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFD 321
Query: 586 VILARQIDAI--HVDVSITALSLSP-NMDVLATAHVDQNGVYLWV 627
+ +++ H +TAL+L P + D+ + D +Y W+
Sbjct: 322 IRTMKEMQTFKGH-GKEVTALALHPYHEDLFVSGDKDGKILY-WI 364
Score = 98 (39.6 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 20/78 (25%), Positives = 48/78 (61%)
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
T ++ ++ + ++++ +G+ L+ +G+SSG ++WN ++++ +AHD+A+ S+ +
Sbjct: 119 TSSNKVKYPINCVSWTPEGRRLV-TGSSSGEFTLWNGLTFNFETIL-QAHDSAVRSIIWS 176
Query: 278 ANEPVLMSASADNSIKMW 295
NE ++S +IK W
Sbjct: 177 HNEDWMVSGDDSGNIKYW 194
>UNIPROTKB|F1MNS4 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 IPI:IPI00711976 UniGene:Bt.20483 OMA:HHFRGSP
GeneTree:ENSGT00690000102183 EMBL:DAAA02057306
ProteinModelPortal:F1MNS4 Ensembl:ENSBTAT00000027147 Uniprot:F1MNS4
Length = 800
Score = 128 (50.1 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 40/139 (28%), Positives = 61/139 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 529
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLL 167
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 168 LFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSL 227
Query: 590 RQIDAIHVDVSITALSLSP 608
+ + V S+ A L P
Sbjct: 228 QATRTVPVFESVEAAVLLP 246
Score = 120 (47.3 bits), Expect = 6.0e-10, Sum P(3) = 6.0e-10
Identities = 46/163 (28%), Positives = 76/163 (46%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGA---VTALAFSSD-GQPLLASGASS 246
P ++A G DG + V +D TH RG+ V +AF D + LL S A+
Sbjct: 119 PTSTLLATGGCDGAVRV----WDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFSSAAD 174
Query: 247 GVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRL 306
I +W+L++R +V+ AH +A+ SL F A+ ++S+ D +W + +
Sbjct: 175 TSIRVWSLQERSCLAVLT-AHYSAVTSLTFSADGHTMLSSGRDKICVIWDLRSLQATRTV 233
Query: 307 LRFRSGHSA--------PPLCIRFYANGRHILSAGQDRAFRLF 341
F S +A P L ++ + G H L+AG A R++
Sbjct: 234 PVFESVEAAVLLPEEPAPELGVK--SAGLHFLTAGDQGALRVW 274
Score = 120 (47.3 bits), Expect = 6.0e-10, Sum P(3) = 6.0e-10
Identities = 43/176 (24%), Positives = 74/176 (42%)
Query: 455 SGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV 514
+G G ++ + H+ ++ VA + L+ + K+W L +
Sbjct: 460 TGHEGGPVFLQAQATQRCHDKDINSVAVAPNDKLLATGSQDRTAKLWALPRCQLLGTFSG 519
Query: 515 GC-SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLL 573
L + + ++ +LAT + D I+L+ + ++ FEGH + F G LL
Sbjct: 520 HRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLL 579
Query: 574 SSGMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
SSG DG L++W + R +DA H D + L S +D A + V LW
Sbjct: 580 SSGSDGLLKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDRALTGASDSRVVLW 632
Score = 112 (44.5 bits), Expect = 3.9e-09, Sum P(3) = 3.9e-09
Identities = 47/187 (25%), Positives = 89/187 (47%)
Query: 490 ISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVIRLFDVV 545
++AG G ++VW+ GR + ++ + G L GLL +V D + L+D
Sbjct: 263 LTAGDQGALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAH 322
Query: 546 ALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSIT 602
+LR+ ++F G+++ + D F ED +++S L+++D+ A QI H D+ +
Sbjct: 323 SLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFDLQTSACQILHGHTDI-VL 380
Query: 603 ALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSVKMPSVS 656
AL + + A+ DQ+ + +W +N+ C+ G + S + I ++
Sbjct: 381 ALDVFRKGRLFASCAKDQS-IRVWRMNKSGEVACVAQGSGHTHSVGT---ICCSRLKETF 436
Query: 657 SVEGCQD 663
V G QD
Sbjct: 437 LVTGSQD 443
Score = 94 (38.1 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 283
V +AF LLA+G G + +W++ R ++ L F +P +L
Sbjct: 112 VATMAFDPTST-LLATGGCDGAVRVWDVV--RCYGTHHFRGSPGVVHLVAFHPDPARLLL 168
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S++AD SI++W + L + H + + F A+G +LS+G+D+ ++ +
Sbjct: 169 FSSAADTSIRVWSLQ----ERSCLAVLTAHYSAVTSLTFSADGHTMLSSGRDKICVIWDL 224
Query: 344 IQDQQSR 350
Q +R
Sbjct: 225 RSLQATR 231
Score = 92 (37.4 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 33/123 (26%), Positives = 57/123 (46%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXX-XPALDVVAV 198
P M D + G +G++++W++ + F+G G PA ++
Sbjct: 111 PVATMAFDPTSTLLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPARLLLFS 170
Query: 199 GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
+D I V +++ L T + AVT+L FS+DG +L+SG + IW+L R
Sbjct: 171 SAADTSIRVWSLQERSCLAVLT-AHYSAVTSLTFSADGHTMLSSGRDK-ICVIWDL--RS 226
Query: 259 LQS 261
LQ+
Sbjct: 227 LQA 229
Score = 76 (31.8 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 54/282 (19%), Positives = 118/282 (41%)
Query: 46 LNLVLVGPQLPKKIRALASYRDYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEH 105
++LV P P ++ +S D + + ++ +R+ + +SA +L H
Sbjct: 154 VHLVAFHPD-PARLLLFSSAADTSIRVW----SLQERSCLAVLTAHYSAVTSLTFSADGH 208
Query: 106 -ILSIDIDGNMFIWAFKGIEEN-LAPV-----GHVKLDDKFTPTCIMHPDTYLNKVIVGS 158
+LS D IW + ++ PV V L ++ P + L+ + G
Sbjct: 209 TMLSSGRDKICVIWDLRSLQATRTVPVFESVEAAVLLPEEPAPELGVK-SAGLHFLTAGD 267
Query: 159 QEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKI---HVHNVRY 212
Q G+L++W ++ + ++ +G G A ++ +D + H++R
Sbjct: 268 Q-GALRVWEAASGRCVHAQQRLRGPGRELTHCTLAHAAGLLLSVTADHNLLLYDAHSLRL 326
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
++ ++ + V L D ++AS +S + +++L+ Q I H + ++
Sbjct: 327 RKQFAGYSEEVLD-VRFLG-PEDSHVVVAS--NSPCLKVFDLQTSACQ--ILHGHTDIVL 380
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+L F + S + D SI++W + + G+ + SGH+
Sbjct: 381 ALDVFRKGRLFASCAKDQSIRVWRMNKS-GEVACVAQGSGHT 421
Score = 60 (26.2 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 26/110 (23%), Positives = 46/110 (41%)
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA--HDNAIISLHFFA 278
H V AL G+ L AS A I +W + K + + + H +++ ++
Sbjct: 373 HGHTDIVLALDVFRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSR 431
Query: 279 -NEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 327
E L++ S D ++K+W LL +GH P+ ++ A R
Sbjct: 432 LKETFLVTGSQDCTVKLWPLPEA-----LLSKGTGHEGGPVFLQAQATQR 476
Score = 58 (25.5 bits), Expect = 0.00090, Sum P(3) = 0.00090
Identities = 23/132 (17%), Positives = 58/132 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+TA S D + +L + + + +++ W ++ + + + H + ++ F +L +
Sbjct: 69 ITAFDLSPDDK-VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATG 127
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 344
D ++++W G FR L + F+ + +L S+ D + R++S +
Sbjct: 128 GCDGAVRVWDVVRCYGTHH---FRGSPGVVHL-VAFHPDPARLLLFSSAADTSIRVWS-L 182
Query: 345 QDQQSRELSQRH 356
Q++ + H
Sbjct: 183 QERSCLAVLTAH 194
Score = 52 (23.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 598 DVSITALSLSPNMDVLATAHVDQNGVYLW-VNRCMFSG 634
D I +++++PN +LAT D+ LW + RC G
Sbjct: 479 DKDINSVAVAPNDKLLATGSQDRTAK-LWALPRCQLLG 515
Score = 38 (18.4 bits), Expect = 6.0e-10, Sum P(3) = 6.0e-10
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 811 IIDHDDHQELDKRPEYLSIELLLDYLIHE 839
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVVKQQELDNLLHE 663
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 129 (50.5 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 32/148 (21%), Positives = 71/148 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH D +T S +G +LLS+ MD ++R+WDV + Q + + +
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFE 285
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ S SP+ +A D+ VY+W
Sbjct: 286 KNLLRCSWSPDGSKIAAGSADRF-VYVW 312
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 40/178 (22%), Positives = 80/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQ+G R S L H GEV + + SAG+ I +W+ G D +
Sbjct: 45 LQAGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYAT 104
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 105 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 163
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 220
Score = 123 (48.4 bits), Expect = 0.00035, P = 0.00035
Identities = 62/263 (23%), Positives = 112/263 (42%)
Query: 87 ATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
AT HS V L G + S D + +W + E GH F +C
Sbjct: 103 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS----FVNSC- 157
Query: 145 MHPDTYLNKVI-VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+P +++ GS +G+++LW+I K + F+ + +++ G D
Sbjct: 158 -YPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGI-DN 215
Query: 204 KIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLE----K 256
I V ++R ++ T++MRG +VT L+ SS+G LL S A + +W++ K
Sbjct: 216 DIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRVWDVRPFAPK 270
Query: 257 RRLQSVIR-EAH--DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
R + + H + ++ + + + + SAD + +W DTT R+L GH
Sbjct: 271 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVW--DTTSR--RILYKLPGH 326
Query: 314 SAPPLCIRFYANGRHILSAGQDR 336
+ + F+ + I+ G R
Sbjct: 327 AGSINEVAFHPD-EPIIETGFHR 348
Score = 97 (39.2 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 40/160 (25%), Positives = 68/160 (42%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 254
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R V+ F+G+ C +S DG + + D + +WD
Sbjct: 255 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDT 314
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATA-H-VDQNG 622
R + + H SI ++ P+ ++ T H + Q G
Sbjct: 315 TSRRILYKLPGHAG-SINEVAFHPDEPIIETGFHRIGQGG 353
Score = 95 (38.5 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F +G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 67 GEVYCCKFHPNGSTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 126 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 152
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/36 (41%), Positives = 20/36 (55%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ NG + SAG DR L++V D
Sbjct: 63 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD 98
Score = 65 (27.9 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 320
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 60 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATL----KGHSGAVMEL 115
Query: 321 RFYANGRHILSAGQDR 336
+ +G + SA D+
Sbjct: 116 HYNTDGSMLFSASTDK 131
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 171 (65.3 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS 201
T PD+ + GS G + ++ + + KK + G P +A G
Sbjct: 111 TVAFSPDS--KYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAI 168
Query: 202 DGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ 260
DG I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 169 DGIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLA 225
Query: 261 SVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI 320
+ H + ++S+ F ++ +S+S+D SIK+W DT+ F H +
Sbjct: 226 GTL-SGHGSWVLSVAFSPDDTHFVSSSSDKSIKVW--DTSSRSCVNTFF--DHQDQVWSV 280
Query: 321 RFYANGRHILSAGQDRAFRLF 341
++ G I+SAG DRA ++
Sbjct: 281 KYNPTGSKIVSAGDDRAIHIY 301
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 51/187 (27%), Positives = 93/187 (49%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ T K++ P +A G GK+++ V ++
Sbjct: 83 SLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGKVNIFGVESGKK-- 140
Query: 218 TFTHSM--RGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISL 274
HS+ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL
Sbjct: 141 --EHSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSL 196
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQ 334
F + +L++AS D IK I+D + L SGH + L + F + H +S+
Sbjct: 197 TFSPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHGSWVLSVAFSPDDTHFVSSSS 252
Query: 335 DRAFRLF 341
D++ +++
Sbjct: 253 DKSIKVW 259
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 45/188 (23%), Positives = 91/188 (48%)
Query: 484 STNTLMISAGYH-GDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRL 541
S ++ I+ G H G + ++ + G+ S G ++ I Y LA+ A D +I +
Sbjct: 115 SPDSKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Query: 542 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS- 600
FD+ +++ EGH I FS D + L+++ DG ++I+DV A + S
Sbjct: 175 FDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSW 234
Query: 601 ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIV-SVKM-PSVSSV 658
+ +++ SP+ ++ D++ + +W S S ++++ ++ V SVK P+ S +
Sbjct: 235 VLSVAFSPDDTHFVSSSSDKS-IKVWDT----SSRSCVNTFFDHQDQVWSVKYNPTGSKI 289
Query: 659 EGCQDENS 666
D+ +
Sbjct: 290 VSAGDDRA 297
Score = 89 (36.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 28/140 (20%), Positives = 58/140 (41%)
Query: 221 HSMRGAVTALAFS---SDGQPLLASGASSGVISIWNL--EKRRLQSVIREAHDNAIISLH 275
H+ A+ A+ DG + +G+ ++ +W EK LQ + E H ++S++
Sbjct: 13 HAHEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSDEKLELQWTL-EGHQLGVVSVN 71
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
N + S+S D I++W +T G + ++ + F + ++I +
Sbjct: 72 ISQNGAIAASSSLDAHIRLWDLET--G--KQIKSMDAGPVDAWTVAFSPDSKYIATGSHL 127
Query: 336 RAFRLFSVIQDQQSRELSQR 355
+F V ++ L R
Sbjct: 128 GKVNIFGVESGKKEHSLDTR 147
Score = 85 (35.0 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 31/151 (20%), Positives = 65/151 (43%)
Query: 436 GNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYH 495
G + G G I F+ I+ G L E H + + + L+++A
Sbjct: 160 GKYLASGAIDGIINIFD----IATGKLLHTLE----GHAMPIRSLTFSPDSQLLVTASDD 211
Query: 496 GDIKVWDFKGRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFE 554
G IK++D + +L G ++ + + + + + D I+++D + V F
Sbjct: 212 GYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFF 271
Query: 555 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
H D++ ++ G ++S+G D ++ I+D
Sbjct: 272 DHQDQVWSVKYNPTGSKIVSAGDDRAIHIYD 302
>DICTYBASE|DDB_G0285601 [details] [associations]
symbol:cdc20 "cdc20/fizzy domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143
dictyBase:DDB_G0285601 GO:GO:0005634 GO:GO:0045335 GO:GO:0051301
GO:GO:0007067 GenomeReviews:CM000153_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000079 eggNOG:COG2319 GO:GO:0016567 RefSeq:XP_638150.1
ProteinModelPortal:Q54MZ3 STRING:Q54MZ3 EnsemblProtists:DDB0237885
GeneID:8625198 KEGG:ddi:DDB_G0285601 KO:K03363 OMA:DAGTYSI
ProtClustDB:CLSZ2430186 Uniprot:Q54MZ3
Length = 499
Score = 158 (60.7 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 48/205 (23%), Positives = 94/205 (45%)
Query: 96 VNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVI 155
+NLL +++++I + +++W + + V+ D + + D N +
Sbjct: 184 LNLLDWSSQNVIAIPLGQTVYLW--NATTSEIQRLFQVEQQDDYITSLQWTKDG--NYLA 239
Query: 156 VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEE 215
VG+ ++QLW+++ KK+ E +G +++ G SD I H+VR
Sbjct: 240 VGTNSCTIQLWDVAHTKKVRELRGHAGRVGALAWNDY--ILSSGSSDTNIFNHDVRVQNH 297
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR--EAHDNAIIS 273
V+ V L +S DG L ASG + +I+IW++ ++ E H A+ +
Sbjct: 298 HVSTLSGHSQEVCGLKWSHDGGQL-ASGGNDNIINIWDINSENFETPAHTFEQHTAAVRA 356
Query: 274 LHFFANEPVLMSA---SADNSIKMW 295
L + +P L++ +AD +I+ W
Sbjct: 357 LAWCPFQPNLLATGGGAADRTIRFW 381
Score = 66 (28.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 555 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
GHT R S DG+ ++S+ D +LR W V
Sbjct: 437 GHTSRALHTAISPDGETVVSASADETLRFWRV 468
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 144 (55.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 49/216 (22%), Positives = 95/216 (43%)
Query: 103 GEHILSIDIDGNMFIW-AFKGIEENLAPVGH--VKLDDKFTPTCIMHPDTYLNKVIVGSQ 159
GE +LS D ++IW ++ E +A GH ++ FTP D + + S
Sbjct: 67 GELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTP------DG--SHIFTCST 118
Query: 160 EGSLQLWNISTKKKLYEFKGWGXXXXXXXXXP-ALDVVAVGCSDGKIHVHNVRYDEELVT 218
+ +L W+I+T ++ FKG G ++ G D I + + R T
Sbjct: 119 DKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHT 178
Query: 219 FTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA 278
+ VTA+ F G+ +++ G + V IW++ K+ + +R H + I +
Sbjct: 179 LESPFQ--VTAVCFGDTGEQVISGGIDNEV-KIWDIRKQAVLHHLR-GHSDTITGMSLSP 234
Query: 279 NEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGH 313
+++ + DN++++W + G+ R ++ GH
Sbjct: 235 EGDFILTNAMDNTLRVWDVRPYAPGE-RCVKVFQGH 269
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 40/171 (23%), Positives = 77/171 (45%)
Query: 135 LDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALD 194
L+ F T + DT +VI G + +++W+I + L+ +G P D
Sbjct: 179 LESPFQVTAVCFGDTG-EQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGD 237
Query: 195 VVAVGCSDGKIHVHNVR-Y--DEELV-TFT---HSMRGAVTALAFSSDGQPLLASGASSG 247
+ D + V +VR Y E V F H+ + A+S G + SG++
Sbjct: 238 FILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSP-GSDKITSGSADR 296
Query: 248 VISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
+ IW++ RR+ + H+ ++ ++ F EP+++S S+D ++ + D
Sbjct: 297 HVYIWDVNTRRILYKL-PGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 42/178 (23%), Positives = 77/178 (43%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW 512
L+SG+ R S L H GE+ L++S+G+ I +W D ++
Sbjct: 34 LESGVRRTSNLQAPIMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVY-EDCENVM 92
Query: 513 EV-GCS-LVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG 569
+ G S V + +G + T + D + +D+ + R+F+GH + + S G
Sbjct: 93 AMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRG 152
Query: 570 KWLLSSGMDG-SLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ LL SG D +++IWD + +TA+ + + + +D N V +W
Sbjct: 153 QQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGID-NEVKIW 209
Score = 126 (49.4 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 34/151 (22%), Positives = 69/151 (45%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ S IK+WD + + E + + + + + D ++++D+
Sbjct: 155 LLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQ 214
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH+D IT S +G ++L++ MD +LR+WDV + Q + +
Sbjct: 215 AVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFE 274
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW-VN 628
++ + SP D + + D++ VY+W VN
Sbjct: 275 KNLLRCAWSPGSDKITSGSADRH-VYIWDVN 304
Score = 94 (38.1 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G + F +G+ LL+SG + IW + + + H A++ HF + +
Sbjct: 56 GEIFTAEFHPEGELLLSSGFDRQIY-IWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIF 114
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD-RAFRLF 341
+ S D ++ W D G R RF+ GH ++ G+ +L +G D R +++
Sbjct: 115 TCSTDKTLAFW--DIATGQ-RQRRFK-GHGNFVNSVQGSRRGQQLLCSGSDDRTIKIW 168
Score = 93 (37.8 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 31/141 (21%), Positives = 60/141 (42%)
Query: 211 RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA 270
R + ++ + R +A+++ + LL SGV NL+ +Q E H+
Sbjct: 5 RPNNSVILAQEAKRSKNDLMAYTNRDKALL----ESGVRRTSNLQAPIMQL---EGHEGE 57
Query: 271 IISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHI 329
I + F +L+S+ D I +W +++ + + SGHS + F +G HI
Sbjct: 58 IFTAEFHPEGELLLSSGFDRQIYIWQVYEDCEN----VMAMSGHSGAVMEAHFTPDGSHI 113
Query: 330 LSAGQDRAFRLFSVIQDQQSR 350
+ D+ + + Q+ R
Sbjct: 114 FTCSTDKTLAFWDIATGQRQR 134
Score = 90 (36.7 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVA 534
+V V T +IS G ++K+WD + + + + + G + T A
Sbjct: 184 QVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNA 243
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---CFSEDGKWLLSSGM-DGSLRIWDV 586
D +R++DV R V+ F+GH C G ++SG D + IWDV
Sbjct: 244 MDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDV 303
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H + S+ A+ SP ++ + D+ +YL
Sbjct: 304 NTRRILYKLPGH-NGSVNAVDFSPKEPLILSGSSDKT-LYL 342
>UNIPROTKB|F1NLV4 [details] [associations]
symbol:GNB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001750 "photoreceptor outer segment" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0005834 GeneTree:ENSGT00550000074331
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:AADN02040871
IPI:IPI00596111 Ensembl:ENSGALT00000002040
Ensembl:ENSGALT00000040376 Uniprot:F1NLV4
Length = 403
Score = 165 (63.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 58/235 (24%), Positives = 102/235 (43%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I N+ PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D ++N++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+ H ++SL + +S + D S K
Sbjct: 153 DDNQIVTSSGDTT--CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDARCFVSGACDASAK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D +G R F +GH + I F+ NG + D RLF + DQ+
Sbjct: 210 LW--DVREGMCRQT-F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260
Score = 54 (24.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 11/54 (20%), Positives = 23/54 (42%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG 569
C + + + + LL DD ++D + GH +R++ ++DG
Sbjct: 271 CGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDG 324
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 146 (56.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 38/126 (30%), Positives = 63/126 (50%)
Query: 468 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRV 526
RS H G V+G+AC ++ L+ +AG + VWD G + +V I++H
Sbjct: 96 RSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPD 155
Query: 527 NG--LLATVADDLVIRLFDVVALRMVRK----FEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ +L + +DD +R++D+ A +K E H +T SEDG L S+G D
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 581 LRIWDV 586
+ +WD+
Sbjct: 216 VNLWDL 221
Score = 142 (55.0 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 51/212 (24%), Positives = 94/212 (44%)
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXXXPALDVVAVGC 200
TC+ L ++ GS++ +++LWN ++K + G G + G
Sbjct: 409 TCVSSSGNVL--IVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGS 466
Query: 201 SDGKIHVHN---VRYD-EELVTF-THSMRGA----VTALAFSSDGQPLLASGASSGVISI 251
D + V + + D EE + T S+ A + ++A + + L+ +G+ SI
Sbjct: 467 GDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDS-LVCTGSEDRTASI 525
Query: 252 WNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 311
W L + V + H I S+ F + +M+AS D ++K+W +DG L+
Sbjct: 526 WRLPDL-VHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAI--SDGS--CLKTFE 580
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
GH++ L F +G +S G D +L++V
Sbjct: 581 GHTSSVLRASFITDGTQFVSCGADGLLKLWNV 612
Score = 121 (47.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 46/199 (23%), Positives = 89/199 (44%)
Query: 437 NFAVLGTAGGWIERFNLQSGISRGSY--LDMSERSNYA-HNGEVVGVACDSTNTLMISAG 493
+F V G+ ++ ++L GIS S +++ RS A H+ ++ VA ++L+ +
Sbjct: 460 SFFVSGSGDRTLKVWSLD-GISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGS 518
Query: 494 YHGDIKVWDFKGR----DLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRM 549
+W LK + + + V+ + T + D ++++ +
Sbjct: 519 EDRTASIWRLPDLVHVVTLKGHKR---RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSC 575
Query: 550 VRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLS 607
++ FEGHT + F DG +S G DG L++W+V + I H D + AL++
Sbjct: 576 LKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHED-KVWALAVG 634
Query: 608 PNMDVLATAHVDQNGVYLW 626
+++AT D + LW
Sbjct: 635 KKTEMIATGGGDAV-INLW 652
Score = 110 (43.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 34/156 (21%), Positives = 67/156 (42%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
+ PD L + +++W++ T K + +KG + ++A +D K
Sbjct: 68 LSPDDKL--LFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRK 125
Query: 205 IHVHNVRYDEELVT-FTHSMRGAVTALAFSSDGQP-LLASGASSGVISIWNLEKRRLQS- 261
+ V +V D T + +G V+++ F D +L SG+ + +W+L + +
Sbjct: 126 VLVWDV--DGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKK 183
Query: 262 --VIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
I E H +A+ S+ + L SA D + +W
Sbjct: 184 CLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 107 (42.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 33/144 (22%), Positives = 66/144 (45%)
Query: 206 HVHNVR-YDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
H +R +D E + S +G V +A + G L +GA V+ +W+++
Sbjct: 80 HSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVL-VWDVDGGFCTH 138
Query: 262 VIREAHDNAIISLHFF--ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 319
R H + S+ F +N+ +L+S S D ++++W + + + + L H +
Sbjct: 139 YFR-GHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTS 197
Query: 320 IRFYANGRHILSAGQDRAFRLFSV 343
I +G + SAG+D+ L+ +
Sbjct: 198 IALSEDGLTLFSAGRDKVVNLWDL 221
Score = 102 (41.0 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 41/145 (28%), Positives = 67/145 (46%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+A C D I++ + D + + +TALA S D + LL S S I +W+LE
Sbjct: 34 IACACGD-VINIVDST-DSSVKSTIEGESDTLTALALSPDDK-LLFSAGHSRQIRVWDLE 90
Query: 256 KRRLQSVIR--EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
+ IR + H+ ++ + A+ +L +A AD + +W DG FR GH
Sbjct: 91 TLKC---IRSWKGHEGPVMGMACHASGGLLATAGADRKVLVW---DVDGGFCTHYFR-GH 143
Query: 314 SAPPLCIRFYANG-RHILSAGQDRA 337
I F+ + ++IL +G D A
Sbjct: 144 KGVVSSILFHPDSNKNILISGSDDA 168
Score = 92 (37.4 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 30/111 (27%), Positives = 54/111 (48%)
Query: 233 SSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 292
SSDG +A A VI+I + ++S I E + + +L ++ +L SA I
Sbjct: 28 SSDGS-FIAC-ACGDVINIVDSTDSSVKSTI-EGESDTLTALALSPDDKLLFSAGHSRQI 84
Query: 293 KMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
++W +T + +R GH P + + +A+G + +AG DR ++ V
Sbjct: 85 RVWDLETL----KCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDV 131
Score = 82 (33.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/126 (23%), Positives = 57/126 (45%)
Query: 473 HNGEVVGVA-CDSTNTLMISAGYHGDIKVWDFKG--RD------LKSRWEVGC---SLVK 520
HNG+++ VA + + +S +KVW G D LK+R V +
Sbjct: 445 HNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINS 504
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ R + L+ T ++D ++ + L V +GH RI FS + ++++ D +
Sbjct: 505 VAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKT 564
Query: 581 LRIWDV 586
++IW +
Sbjct: 565 VKIWAI 570
Score = 68 (29.0 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 25/108 (23%), Positives = 50/108 (46%)
Query: 144 IMHPDTYLNKVIVGSQEGSLQLWNIS---TKKKLYEF--KGWGXXXXXXXXXPALDVVAV 198
+ HPD+ N +I GS + ++++W+++ T+KK K + L + +
Sbjct: 151 LFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSA 210
Query: 199 GCSDGKIHVHNVR-YDEELVTFTHSMRGAVTALAFSSDGQPLLASGAS 245
G D +++ ++ Y + T+ + AVT + S G P + AS
Sbjct: 211 G-RDKVVNLWDLHDYSCKATVATYEVLEAVTTV---SSGTPFASFVAS 254
Score = 67 (28.6 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 28/127 (22%), Positives = 54/127 (42%)
Query: 513 EVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG-KW 571
EV SL V N L+ T + D +RL++ + + GH I F++ +
Sbjct: 402 EVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSF 461
Query: 572 LLSSGMDGSLRIWDV------------ILARQIDAIHVDVSITALSLSPNMDVLATAHVD 619
+S D +L++W + + R + A H D I +++++ N ++ T D
Sbjct: 462 FVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAH-DKDINSVAVARNDSLVCTGSED 520
Query: 620 QNGVYLW 626
+ +W
Sbjct: 521 RTAS-IW 526
Score = 46 (21.3 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 483 DSTNTLMISAGYHGDIKVWDFKG 505
DS T I+ G G +++W +G
Sbjct: 266 DSQATYFITVGERGVVRIWKSEG 288
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 155 (59.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 53/219 (24%), Positives = 100/219 (45%)
Query: 142 TCIMHPDTYLNK--VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVG 199
TC+ D LN + GS + +L +W++ + + Y F G P+ ++A G
Sbjct: 23 TCV---DFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASG 79
Query: 200 CSDG--KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKR 257
D +I V NV+ E V H+ V ++ F SDGQ L+ + + + +W+ ++
Sbjct: 80 SRDKTVRIWVPNVK-GESTVFRAHT--ATVRSVHFCSDGQSLVTA-SDDKTVKVWSTHRQ 135
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
R + + H N + F + +++SAS D ++K+W D T + + H
Sbjct: 136 RFLFSLTQ-HINWVRCAKFSPDGRLIVSASDDKTVKLW--DKTSRE--CIHSYCEHGGFV 190
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
+ F+ +G I +AG D +++ D ++ L Q +
Sbjct: 191 TYVDFHPSGTCIAAAGMDNTVKVW----DARTHRLLQHY 225
Score = 143 (55.4 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/243 (20%), Positives = 98/243 (40%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGS 162
+H+ S +D + IW K GH K TC+ P +L + GS++ +
Sbjct: 32 KHLASGSMDSTLMIWHMKPQSRAYRFTGH-----KDAVTCVNFSPSGHL--LASGSRDKT 84
Query: 163 LQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHS 222
+++W + K + F+ + D + V + L + T
Sbjct: 85 VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQH 144
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+ V FS DG+ L+ S + + +W+ R E H + + F +
Sbjct: 145 INW-VRCAKFSPDGR-LIVSASDDKTVKLWDKTSRECIHSYCE-HGGFVTYVDFHPSGTC 201
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ +A DN++K+W T RLL+ HSA + F+ +G ++++A D ++
Sbjct: 202 IAAAGMDNTVKVWDARTH----RLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILD 257
Query: 343 VIQ 345
+++
Sbjct: 258 LME 260
Score = 136 (52.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 29/113 (25%), Positives = 52/113 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 531
H G V V + T + +AG +KVWD + L +++ + V + +H L
Sbjct: 186 HGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLI 245
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
T + D +++ D++ R++ GH T FS G++ S G D + +W
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMVW 298
Score = 121 (47.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
Identities = 37/151 (24%), Positives = 69/151 (45%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG-L 529
AH V V S +++A +KVW + R L S + + V+ +G L
Sbjct: 101 AHTATVRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQ-HINWVRCAKFSPDGRL 159
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
+ + +DD ++L+D + + + H +T F G + ++GMD ++++WD
Sbjct: 160 IVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTH 219
Query: 590 RQIDAIHV-DVSITALSLSPNMDVLATAHVD 619
R + + ++ ALS P+ + L TA D
Sbjct: 220 RLLQHYQLHSAAVNALSFHPSGNYLITASSD 250
Score = 120 (47.3 bits), Expect = 0.00073, P = 0.00073
Identities = 33/111 (29%), Positives = 53/111 (47%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G VT + F G + A+G + + +W+ RL + H A+ +L F + L+
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDN-TVKVWDARTHRLLQHY-QLHSAAVNALSFHPSGNYLI 245
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
+AS+D+++K I D +G RLL GH P + F G + S G D
Sbjct: 246 TASSDSTLK--ILDLMEG--RLLYTLHGHQGPATTVAFSRTGEYFASGGSD 292
Score = 85 (35.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+ H +A+ + F N L S S D+++ +W R RF +GH C+ F
Sbjct: 16 KGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS---RAYRF-TGHKDAVTCVNFSP 71
Query: 325 NGRHILSAG-QDRAFRLF 341
+G H+L++G +D+ R++
Sbjct: 72 SG-HLLASGSRDKTVRIW 88
Score = 61 (26.5 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 15/48 (31%), Positives = 21/48 (43%)
Query: 303 DPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSR 350
DP L R GH C+ F N +H+ S D ++ + QSR
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHM--KPQSR 53
Score = 51 (23.0 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 18/76 (23%), Positives = 29/76 (38%)
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 485
AV A + GN+ + ++ ++ +L G R Y + + H G VA T
Sbjct: 231 AVNALSFHPSGNYLITASSDSTLKILDLMEG--RLLY------TLHGHQGPATTVAFSRT 282
Query: 486 NTLMISAGYHGDIKVW 501
S G + VW
Sbjct: 283 GEYFASGGSDEQVMVW 298
>UNIPROTKB|J3KNP2 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AC005606
GO:GO:0006364 GO:GO:0032040 EMBL:AC005363 HGNC:HGNC:11587
Ensembl:ENST00000332704 Uniprot:J3KNP2
Length = 697
Score = 140 (54.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/155 (28%), Positives = 67/155 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 529
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 16 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLL 75
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 76 LFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSC 135
Query: 590 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 624
+ + V S+ A L P V + V G+Y
Sbjct: 136 QATRTVPVFESVEAAVLLPEEPV-SQLGVKSPGLY 169
Score = 133 (51.9 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 56/231 (24%), Positives = 103/231 (44%)
Query: 86 VATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAF-KGI-EENLAPV-GHVKLDDKFTPT 142
V W + K ++L +++ D + +W K + +N AP G + L + T
Sbjct: 308 VRIWRMN--KAGQVMLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPILLQAQTTQR 365
Query: 143 CIMHPDTYLNKVIV---------GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPAL 193
C H D +N V + GSQ+ + +LW + + L F G P
Sbjct: 366 C--H-DKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMD 422
Query: 194 DVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
V+A +DG I + ++ L TF H +V +AF S G LL+SG S G++ +W
Sbjct: 423 QVLATASADGTIKLWALQDFSCLKTFEGHD--ASVLKVAFVSRGTQLLSSG-SDGLVKLW 479
Query: 253 NLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGD 303
++ + +AH++ + LH + ++ ++D+ + +W D T+ +
Sbjct: 480 TIKNNECVRTL-DAHEDKVWGLHCSRLDDHALTGASDSRVILWK-DVTEAE 528
Score = 131 (51.2 bits), Expect = 0.00011, P = 0.00011
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ ++A + + + LLA+G+ +W L + +L V H + + F + VL +A
Sbjct: 371 INSVAIAPNDK-LLATGSQDRTAKLWALPQCQLLGVF-SGHRRGLWCVQFSPMDQVLATA 428
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 429 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN 484
Query: 347 QQSREL 352
+ R L
Sbjct: 485 ECVRTL 490
Score = 116 (45.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 42/171 (24%), Positives = 73/171 (42%)
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SL 518
G L ++ + H+ ++ VA + L+ + K+W L + L
Sbjct: 354 GPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGL 413
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + ++ +LAT + D I+L+ + ++ FEGH + F G LLSSG D
Sbjct: 414 WCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSD 473
Query: 579 GSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
G +++W + R +DA H D + L S +D A + V LW
Sbjct: 474 GLVKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDHALTGASDSRVILW 521
Score = 112 (44.5 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 46/168 (27%), Positives = 76/168 (45%)
Query: 191 PALDVVAVGCSDGKIHVHN-VRYDEELVTFTHSMRGA---VTALAFSSDGQPLLA-SGAS 245
P ++A G DG + V + VR+ TH RG+ V +AF D LL S A+
Sbjct: 27 PTSTLLATGGCDGAVRVWDIVRHYG-----THHFRGSPGVVHLVAFHPDPTRLLLFSSAT 81
Query: 246 SGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPR 305
I +W+L+ R +V+ AH +A+ SL F A+ ++S+ D +W +
Sbjct: 82 DAAIRVWSLQDRSCLAVLT-AHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRT 140
Query: 306 LLRFRSGHSA---P--PLC-IRFYANGRHILSAGQDRAFRLFSVIQDQ 347
+ F S +A P P+ + + G + L+AG R++ Q
Sbjct: 141 VPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQ 188
Score = 96 (38.9 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXX-XPALDVVAV 198
P M D + G +G++++W+I + F+G G P ++
Sbjct: 19 PVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFS 78
Query: 199 GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+D I V +++ D + + AVT+LAFS+DG +L+SG + IW+L+
Sbjct: 79 SATDAAIRVWSLQ-DRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK-ICIIWDLQ 133
Score = 92 (37.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 283
V +AF LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 20 VATMAFDPTST-LLATGGCDGAVRVWDIVRHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 76
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S++ D +I++W D L + H + + F A+G +LS+G+D+ +
Sbjct: 77 FSSATDAAIRVWSLQ----DRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK----ICI 128
Query: 344 IQDQQS 349
I D QS
Sbjct: 129 IWDLQS 134
Score = 90 (36.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 41/178 (23%), Positives = 87/178 (48%)
Query: 484 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVI 539
S ++AG G ++VW+ G+ + ++ + G L G++ T D +
Sbjct: 165 SPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNL 224
Query: 540 RLFDVVALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH 596
L++ +LR+ ++F G+++ + D F ED +++S L+++++ A QI H
Sbjct: 225 LLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFELQTSACQILHGH 283
Query: 597 VDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNI-DSY-ASGKEIVSVKM 652
D+ + AL + + A+ DQ+ V +W R +G + +S+ +G + +VK+
Sbjct: 284 TDI-VLALDVFRKGWLFASCAKDQS-VRIW--RMNKAGQVMLKESFLVTGSQDCTVKL 337
Score = 79 (32.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 24/95 (25%), Positives = 43/95 (45%)
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
+ HD I S+ N+ +L + S D + K+W +LL SGH C++F
Sbjct: 364 QRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQC----QLLGVFSGHRRGLWCVQFS 419
Query: 324 ANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVA 358
+ + +A D +L++ +QD + + H A
Sbjct: 420 PMDQVLATASADGTIKLWA-LQDFSCLKTFEGHDA 453
Score = 63 (27.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/147 (17%), Positives = 63/147 (42%)
Query: 155 IVGSQEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH--- 208
+ +G+L++W ++ + +Y + G G VV +D + ++
Sbjct: 171 LTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEAR 230
Query: 209 NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
++R ++ ++ + V L D ++AS +S + ++ L+ Q I H
Sbjct: 231 SLRLQKQFAGYSEEVLD-VRFLG-PEDSHVVVAS--NSPCLKVFELQTSACQ--ILHGHT 284
Query: 269 NAIISLHFFANEPVLMSASADNSIKMW 295
+ +++L F + S + D S+++W
Sbjct: 285 DIVLALDVFRKGWLFASCAKDQSVRIW 311
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 52/190 (27%), Positives = 95/190 (50%)
Query: 157 GSQEG--SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
G Q G S++LW++ K++ P +A G GK+++ V +
Sbjct: 62 GHQLGVVSVRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGK 121
Query: 215 ELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
+ ++ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I S
Sbjct: 122 K--EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRS 177
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
L F + +L++AS D IK I+D + L SGH++ L + F + H +S+
Sbjct: 178 LTFSPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSS 233
Query: 334 QDRAFRLFSV 343
D++ +++ V
Sbjct: 234 SDKSVKVWDV 243
Score = 158 (60.7 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/202 (24%), Positives = 92/202 (45%)
Query: 142 TCIMHPDT-YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGC 200
T PD+ YL G+ G + ++ + + KK Y G P +A G
Sbjct: 93 TLAFSPDSQYL---ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA 149
Query: 201 SDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRL 259
DG I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 150 IDGIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANL 206
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 319
+ H + ++++ F ++ +S+S+D S+K+W D G + H
Sbjct: 207 AGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV--GTRTCVHTFFDHQDQVWG 261
Query: 320 IRFYANGRHILSAGQDRAFRLF 341
+++ NG I+S G D+ ++
Sbjct: 262 VKYNGNGSKIVSVGDDQEIHIY 283
Score = 124 (48.7 bits), Expect = 0.00013, P = 0.00013
Identities = 41/184 (22%), Positives = 75/184 (40%)
Query: 404 VWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYL 463
+W L+N G+ I + P S + GT G + F ++SG + Y
Sbjct: 72 LWDLEN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--KKEY- 124
Query: 464 DMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIV 522
+ R + ++ +A + S G I ++D G+ L + + +
Sbjct: 125 SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLT 179
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+ + LL T +DD I+++DV + GH + + F D +SS D S++
Sbjct: 180 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 239
Query: 583 IWDV 586
+WDV
Sbjct: 240 VWDV 243
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 43/129 (33%), Positives = 65/129 (50%)
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 595
D +RL+ VR F GH + FS +GK+L S+G D L++WD+ +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 596 --HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMP 653
H D SIT+L+ SP+ ++A+A +D N V +W R S N + S E+V V
Sbjct: 61 RGHTD-SITSLAFSPDSGLIASASMD-NSVRVWDIR---STCCNTPADGSSGELVGVYTG 115
Query: 654 SVSSVEGCQ 662
+S+V Q
Sbjct: 116 QMSNVLSVQ 124
Score = 124 (48.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 527 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
NG LA+ +D ++L+D+ + + ++ GHTD IT FS D + S+ MD S+R+WD
Sbjct: 33 NGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWD 92
Query: 586 V 586
+
Sbjct: 93 I 93
Score = 117 (46.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 37/130 (28%), Positives = 64/130 (49%)
Query: 202 DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
D + + + + + FT RG V +L+FS +G+ LAS + +W+L L
Sbjct: 1 DKTVRLWSAQQGNSVRLFT-GHRGPVLSLSFSPNGK-YLASAGEDQRLKLWDLASGTLFK 58
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTT------DGDP-RLLRFRSGHS 314
+R H ++I SL F + ++ SAS DNS+++W +T DG L+ +G
Sbjct: 59 ELR-GHTDSITSLAFSPDSGLIASASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQM 117
Query: 315 APPLCIRFYA 324
+ L ++F A
Sbjct: 118 SNVLSVQFMA 127
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 119 (46.9 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 49/196 (25%), Positives = 89/196 (45%)
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVHNVRYDEELVTFT 220
+LQ++ T +KL E K +A CS D K+ + N E + T+
Sbjct: 638 TLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIAT-CSVDKKVKIWNSMTGELVHTYD 696
Query: 221 -HSMRGAVTALAFSSDGQPLL-ASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA 278
HS + V F++ LL A+G+S + +W+L ++ ++ + H N++ F
Sbjct: 697 EHSEQ--VNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMF-GHTNSVNHCRFSP 753
Query: 279 NEPVLMSASADNSIKMWIFDTTDGDPR----LLRFRSGHSAPP-------LCIRFYANGR 327
++ +L S SAD ++K+W D T + R + +F P C + A+G
Sbjct: 754 DDKLLASCSADGTLKLW--DATSANERKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGA 811
Query: 328 HILSAGQDRAFRLFSV 343
I+ A +++ F LF +
Sbjct: 812 RIMVAAKNKIF-LFDI 826
Score = 114 (45.2 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 50/174 (28%), Positives = 79/174 (45%)
Query: 467 ERSNYAHNGEVVGVACDSTN--TLMISAGYHGDIKVWDFKGRDL-----KSRWEVGCSLV 519
E+ H G V+ +CD ++ T S K+W F DL + R GC V
Sbjct: 1078 EKDFVCHQGTVL--SCDISHDATKFSSTSADKTAKIWSF---DLLLPLHELRGHNGC--V 1130
Query: 520 KIVYHRVNG-LLATVADDLVIRLFDVV---ALRMVRKF--EG---HTDRITDFCFSEDGK 570
+ V+ LLAT D+ IR+++V L + EG H +TD CFS DGK
Sbjct: 1131 RCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGK 1190
Query: 571 WLLSSGMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 623
L+S+G G ++ W+V+ + + ++ + +SP+ T VD G+
Sbjct: 1191 MLISAG--GYIKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVT--VDNLGI 1240
Score = 103 (41.3 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVI 263
I+ N+ LV H+ AV FS DGQ + + GA + ++ E +L +
Sbjct: 598 INKKNITNLSRLVVRPHT--DAVYHACFSEDGQRIASCGADK-TLQVFKAETGEKLLEI- 653
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
+AH++ ++ F ++ + + S D +K+W ++ G+ L+ HS C F
Sbjct: 654 -KAHEDEVLCCAFSTDDRFIATCSVDKKVKIW--NSMTGE--LVHTYDEHSEQVNCCHFT 708
Query: 324 ANGRHILSA-GQDRAF-RLFSVIQDQ 347
+ H+L A G F +L+ + Q +
Sbjct: 709 NSSHHLLLATGSSDCFLKLWDLNQKE 734
Score = 81 (33.6 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 30/152 (19%), Positives = 73/152 (48%)
Query: 478 VGVACDSTNTLMISAG-YHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD 535
V C S + I+ G +G I++ + R +SR++ ++ I + L + +D
Sbjct: 964 VSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSD 1023
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA-RQIDA 594
D I++++ + + GH + + DF ++ + LLS DG++++W++I ++ D
Sbjct: 1024 DAEIQVWNWQLDKCIF-LRGHQETVKDFRLLKNSR-LLSWSFDGTVKVWNIITGNKEKDF 1081
Query: 595 IHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ ++ + +S + ++ D+ +W
Sbjct: 1082 VCHQGTVLSCDISHDATKFSSTSADKTAK-IW 1112
Score = 76 (31.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 22/90 (24%), Positives = 39/90 (43%)
Query: 530 LATVA-DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
LA VA + L++ + V GH + FS DG L+S D ++R+W+
Sbjct: 854 LAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKK 913
Query: 589 ARQIDAIHVDVSITALSLSPNMDVLATAHV 618
+ A+ + + + + VLA H+
Sbjct: 914 VCKNSAVMLKQEVDVVFQENEVMVLAVDHI 943
Score = 70 (29.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 31/121 (25%), Positives = 48/121 (39%)
Query: 402 AYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGS 461
A +W + +L H LR + V+ S G G I +N+ +G
Sbjct: 1109 AKIWSF-DLLLPLHELRG---HNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHL 1164
Query: 462 YLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVK 520
+SE H G V + ++ISAG G IK W+ G ++ + G +L K
Sbjct: 1165 CAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQTFYTNGTNLKK 1222
Query: 521 I 521
I
Sbjct: 1223 I 1223
Score = 70 (29.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 41/198 (20%), Positives = 77/198 (38%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVH-----NV 210
GS + L+LW+++ K+ G P D + CS DG + + N
Sbjct: 719 GSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD-DKLLASCSADGTLKLWDATSANE 777
Query: 211 RYDEELVTF-------THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
R + F M V ++S+DG ++ A+ I ++++ L I
Sbjct: 778 RKSINVKQFFLNLEDPQEDMEVIVKCCSWSADGARIMV--AAKNKIFLFDIHTSGLLGEI 835
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
H + I F + + A + +++W TD ++ R GH + + F
Sbjct: 836 HTGHHSTIQYCDFSPQNHLAVVALSQYCVELW---NTDSRSKVADCR-GHLSWVHGVMFS 891
Query: 324 ANGRHILSAGQDRAFRLF 341
+G L++ D+ RL+
Sbjct: 892 PDGSSFLTSSDDQTIRLW 909
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 113 (44.8 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 36/140 (25%), Positives = 70/140 (50%)
Query: 212 YDEELVTFTHSMRGA---VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
+D + T H+++G V A+++S +G ++A+G+ + IW+ +K + + H
Sbjct: 176 WDCDTGTPLHTLKGHTSWVLAVSYSPNGA-MIATGSMDNTVRIWDAKKGQALGAPLKGHV 234
Query: 269 NAIISL-----HFF-ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 322
I SL H + P L SAS D+++++W + D L SGH C+R+
Sbjct: 235 KWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVL----SGHKGSVTCVRW 290
Query: 323 YANGRHILSAGQDRAFRLFS 342
G+ I ++ DR ++++
Sbjct: 291 GGTGK-IYTSSHDRTIKVWN 309
Score = 112 (44.5 bits), Expect = 8.3e-06, Sum P(3) = 8.3e-06
Identities = 31/147 (21%), Positives = 62/147 (42%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ GS + + ++W+ T L+ KG P ++A G D + + + +
Sbjct: 164 MVSGSGDSTARIWDCDTGTPLHTLKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKG 223
Query: 214 EELVTFTHSMRGAVTALAFS-----SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
+ L +T+LA+ G P LAS + + IW++ +R V+ H
Sbjct: 224 QALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVL-SGHK 282
Query: 269 NAIISLHFFANEPVLMSASADNSIKMW 295
++ + + + S S D +IK+W
Sbjct: 283 GSVTCVRWGGTGKIYTS-SHDRTIKVW 308
Score = 111 (44.1 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 32/116 (27%), Positives = 57/116 (49%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS----RWEVGCSLVKIVYHRVNG 528
H EV V + SAG+ +K+W+ GRD K R VG ++ + + +
Sbjct: 404 HQKEVNHVTFSPDMAYIASAGFDNHVKLWN--GRDGKFITTLRGHVG-AVYQCCFSADSR 460
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
LL + + D +++++V ++ GH D + +S DG+ + S G D ++RIW
Sbjct: 461 LLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
Score = 95 (38.5 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 24/101 (23%), Positives = 50/101 (49%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
+A+ D ++L++ + + GH + CFS D + L+SS D +L++W+V
Sbjct: 420 IASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADSRLLVSSSKDTTLKVWNVRTG 479
Query: 590 RQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVN 628
+ + + H D + A+ SP+ + + D+ + +W N
Sbjct: 480 KLSEDLPGHKD-EVFAVDWSPDGQKVGSGGKDK-AIRIWRN 518
Score = 78 (32.5 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 30/119 (25%), Positives = 56/119 (47%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYH---GDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVN 527
AH V +A ST+ ++ +A YH G + D K K R+E ++ + +
Sbjct: 321 AHAHRVNHLAL-STDFILRTA-YHDHTGKVPESDADKVAMAKKRFEKAATINNKIVEK-- 376
Query: 528 GLLATVADDLVIRLFDVVAL-RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
L + +DD + L+D + + V + GH + FS D ++ S+G D +++W+
Sbjct: 377 --LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPDMAYIASAGFDNHVKLWN 433
Score = 40 (19.1 bits), Expect = 6.5e-06, Sum P(3) = 6.5e-06
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 627 VNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVP 678
V +C FS DS + +S K+ ++K+ +V + + +D + +V D P
Sbjct: 450 VYQCCFSADSRL-LVSSSKD-TTLKVWNVRTGKLSEDLPGHKDEVFAVDWSP 499
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 137 (53.3 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 67/268 (25%), Positives = 115/268 (42%)
Query: 87 ATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
AT HS V L G + S D + +W + E GH F +C
Sbjct: 130 ATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS----FVNSC- 184
Query: 145 MHPDTYLNKVI-VGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
+P +++ GS +G+++LW+I K + F+ + +++ G D
Sbjct: 185 -YPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGI-DN 242
Query: 204 KIHVHNVRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLE----K 256
I V ++R ++ T++MRG +VT L+ SS+G LL S A + IW++ K
Sbjct: 243 DIKVWDLRQNK----LTYTMRGHADSVTGLSLSSEGSYLL-SNAMDNTVRIWDVRPFAPK 297
Query: 257 RRLQSVIR-EAH--DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
R + + H + ++ + + + SAD + +W DTT R+L GH
Sbjct: 298 ERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVW--DTTSR--RILYKLPGH 353
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLF 341
+ + F+ ILSA D+ RL+
Sbjct: 354 AGSVNELAFHPEEPIILSASSDK--RLY 379
Score = 129 (50.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/148 (22%), Positives = 71/148 (47%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVD 598
++ GH D +T S +G +LLS+ MD ++RIWDV + Q + + +
Sbjct: 253 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFE 312
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ S SP+ +A D+ VY+W
Sbjct: 313 KNLLRCSWSPDGSKIAGGSADRF-VYVW 339
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 40/178 (22%), Positives = 79/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQSG R S L H GEV + SAG+ I +W+ G D +
Sbjct: 72 LQSGPPRCSSLQAPIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYAT 131
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 132 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 190
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ + + A++ + D + + +D N + +W
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 247
Score = 100 (40.3 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 39/161 (24%), Positives = 68/161 (42%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 222 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 281
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R V+ F+G+ C +S DG + D + +WD
Sbjct: 282 MDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDT 341
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H S+ L+ P ++ +A D+ +Y+
Sbjct: 342 TSRRILYKLPGHAG-SVNELAFHPEEPIILSASSDKR-LYM 380
Score = 90 (36.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F G L ++G +I +WN+ + H A++ LH+ + +L
Sbjct: 94 GEVYCCKFHPWGNTLASAGFDR-LILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 152
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 153 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 179
Score = 64 (27.6 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 14/36 (38%), Positives = 19/36 (52%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ G + SAG DR L++V D
Sbjct: 90 SGHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGD 125
Score = 55 (24.4 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 23/102 (22%), Positives = 39/102 (38%)
Query: 236 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
GQP + SG +L+ ++ H+ + F L SA D I +W
Sbjct: 64 GQPSTGALLQSGPPRCSSLQA---PIMLLSGHEGEVYCCKFHPWGNTLASAGFDRLILLW 120
Query: 296 -IFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
++ D L GHS + + + +G + SA D+
Sbjct: 121 NVYGDCDNYATL----KGHSGAVMELHYNTDGSMLFSASTDK 158
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 66/266 (24%), Positives = 123/266 (46%)
Query: 81 KRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKG--IEENLAPVGHVKLDDK 138
+ AH+ A WS K + E ++S +D + +W + +E A GH +L
Sbjct: 12 EHAHEDAIWSVGWGKNSND--GSELVISGSLDDLVKVWKWSDERLEMQWALEGH-QLG-- 66
Query: 139 FTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAV 198
+ + P N + S + ++LW++ + K++ P +A
Sbjct: 67 -VVSVDVSPSG--NIMASSSLDAHIRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLAT 123
Query: 199 GCSDGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKR 257
G GK+++ V ++ ++ RG + ++A+S DG+ LASGA G+I+I+++
Sbjct: 124 GSHVGKVNIFGVETGKK--EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATG 180
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
+L + E H I SL F + +L++AS D IK I+D L SGH +
Sbjct: 181 KLLHTL-EGHAMPIRSLTFSTDSQLLVTASDDGYIK--IYDVQHAS--LAATLSGHGSWV 235
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSV 343
L + F + H +S+ D++ +++ V
Sbjct: 236 LNVAFSPDDAHFVSSSSDKSVKVWDV 261
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 55/241 (22%), Positives = 107/241 (44%)
Query: 103 GEHILSIDIDGNMFIWAFK-GIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEG 161
G + S +D ++ +W + G + G V D ++ PD+ + GS G
Sbjct: 76 GNIMASSSLDAHIRLWDLESGKQIRSIDAGPV---DAWSVA--FSPDS--QHLATGSHVG 128
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFT- 220
+ ++ + T KK Y G P +A G DG I++ ++ + L T
Sbjct: 129 KVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
H+M + +L FS+D Q LL + + G I I++++ L + + H + ++++ F ++
Sbjct: 189 HAM--PIRSLTFSTDSQ-LLVTASDDGYIKIYDVQHASLAATL-SGHGSWVLNVAFSPDD 244
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
+S+S+D S+K+W L H +++ NG I+S G D+ +
Sbjct: 245 AHFVSSSSDKSVKVWDVSARTCVHTFL----DHQDQVWGVKYNRNGSKIVSVGDDQEIHV 300
Query: 341 F 341
+
Sbjct: 301 Y 301
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 42/197 (21%), Positives = 80/197 (40%)
Query: 391 NVVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIER 450
N++ A +W L++ G+ I R P + S G+ G +
Sbjct: 77 NIMASSSLDAHIRLWDLES---GKQI-RSIDAGPVDAWSVAFSPDSQHLATGSHVGKVNI 132
Query: 451 FNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLK 509
F +++G + Y + R + ++ +A + S G I ++D G+ L
Sbjct: 133 FGVETG--KKEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH 184
Query: 510 SRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG 569
+ + + + + LL T +DD I+++DV + GH + + FS D
Sbjct: 185 TLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVAFSPDD 244
Query: 570 KWLLSSGMDGSLRIWDV 586
+SS D S+++WDV
Sbjct: 245 AHFVSSSSDKSVKVWDV 261
Score = 94 (38.1 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 28/139 (20%), Positives = 59/139 (42%)
Query: 221 HSMRGAVTALAF---SSDGQPLLASGASSGVISIWNLEKRRLQSV-IREAHDNAIISLHF 276
H+ A+ ++ + S+DG L+ SG+ ++ +W RL+ E H ++S+
Sbjct: 13 HAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLEMQWALEGHQLGVVSVDV 72
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ ++ S+S D I++W D G + +R + F + +H+ +
Sbjct: 73 SPSGNIMASSSLDAHIRLW--DLESG--KQIRSIDAGPVDAWSVAFSPDSQHLATGSHVG 128
Query: 337 AFRLFSVIQDQQSRELSQR 355
+F V ++ L R
Sbjct: 129 KVNIFGVETGKKEYSLDTR 147
Score = 92 (37.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 31/151 (20%), Positives = 66/151 (43%)
Query: 436 GNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYH 495
G + G G I F+ I+ G L E H + + + + L+++A
Sbjct: 160 GKYLASGAIDGIINIFD----IATGKLLHTLE----GHAMPIRSLTFSTDSQLLVTASDD 211
Query: 496 GDIKVWDFKGRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFE 554
G IK++D + L + G ++ + + + + + D ++++DV A V F
Sbjct: 212 GYIKIYDVQHASLAATLSGHGSWVLNVAFSPDDAHFVSSSSDKSVKVWDVSARTCVHTFL 271
Query: 555 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
H D++ ++ +G ++S G D + ++D
Sbjct: 272 DHQDQVWGVKYNRNGSKIVSVGDDQEIHVYD 302
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 168 (64.2 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 66/269 (24%), Positives = 125/269 (46%)
Query: 81 KRAHQVATWS---RHSAKVNLLLLFGEHILSIDIDGNMFIWAFKG--IEENLAPVGHVKL 135
++AH A WS + K N+ E +++ +D + +W ++ +E + GH +L
Sbjct: 12 EQAHDDAIWSVAWETNKKENI-----ETVVTGSLDDLVKVWKWRDERLELQWSLEGH-QL 65
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
I H L S + ++LW++ K++ P
Sbjct: 66 G--VVSVDISHT---LPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQY 120
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNL 254
+A G GK+++ V ++ ++ RG + ++A+S DG+ LASGA G+I+I+++
Sbjct: 121 LATGTHMGKVNIFGVESGKK--EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDI 177
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+L + E H I SL F + +L++AS D IK I+D + L SGH+
Sbjct: 178 ATGKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHA 232
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ L + F + H +S+ D++ +++ V
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDV 261
Score = 163 (62.4 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 60/260 (23%), Positives = 115/260 (44%)
Query: 89 WSRHSAKVNLLLLFGEHILSI----DIDGNMFIWAFK-GIEENLAPVGHVKLDDKFTPTC 143
WS ++ ++ + H L I +D ++ +W + G + G V D +T
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPV---DAWT--L 112
Query: 144 IMHPDT-YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
PD+ YL G+ G + ++ + + KK Y G P +A G D
Sbjct: 113 AFSPDSQYL---ATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169
Query: 203 GKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
G I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAG 226
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H + ++++ F ++ +S+S+D S+K+W D G + H ++
Sbjct: 227 TL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV--GTRTCIHTFFDHQDQVWGVK 281
Query: 322 FYANGRHILSAGQDRAFRLF 341
+ NG I+S G D+ ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 123 (48.4 bits), Expect = 0.00020, P = 0.00020
Identities = 41/188 (21%), Positives = 76/188 (40%)
Query: 400 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 459
A +W L+N G+ ++ P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQ-MKSIDAGPVDAWTLAFSPDSQYLATGTHMGKVNIFGVESG--K 139
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 518
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 579 GSLRIWDV 586
S+++WDV
Sbjct: 254 KSVKVWDV 261
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 135 (52.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 47/175 (26%), Positives = 77/175 (44%)
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKI-VYH 524
+E+ H G V+ A + S K+W F+ + + + V+ +
Sbjct: 1083 TEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIWSFESSSVLHELKGHEACVRCSAFS 1142
Query: 525 RVNGLLATVADDLVIRLFDVVALRMVRKFEG---------HTDRITDFCFSEDGKWLLSS 575
N LLAT D IR++D++ ++ H +TD FS D K L+SS
Sbjct: 1143 PSNKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSS 1202
Query: 576 GMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGVYLWVNR 629
G G L+ WDV + + + ++ ++ +SPN DV T VD G+ L+V R
Sbjct: 1203 G--GYLKWWDVTTGESLQTFYTNGTNLKSIHVSPNFDVYVT--VDNLGI-LYVLR 1252
Score = 102 (41.0 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 40/179 (22%), Positives = 81/179 (45%)
Query: 486 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN---GLLATVADDLVIRLF 542
N+ ++S + G +KVW+ K+ + C ++ V+ ++ + D +++
Sbjct: 1061 NSKLLSWSFDGTVKVWNITTG--KTEKDFACHRGAVLSCAVSPDGSRFSSTSADKTAKIW 1118
Query: 543 DVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVILARQI---DAIHVD 598
+ ++ + +GH + FS K LL++G D G +RIWD++ + ++ VD
Sbjct: 1119 SFESSSVLHELKGHEACVRCSAFSPSNK-LLATGDDKGDIRIWDILTGELLHFCSSVTVD 1177
Query: 599 VS-------ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 650
+T LS SP+ +L V G W + + +G+S Y +G + S+
Sbjct: 1178 EEEPTHGGWVTDLSFSPDSKML----VSSGGYLKWWD--VTTGESLQTFYTNGTNLKSI 1230
Score = 97 (39.2 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISL 274
LV H R AV FS D Q + + GA + ++ E RL + AHD+ I+
Sbjct: 608 LVVRPH--RDAVYHACFSRDRQRIASCGADK-TLQVFKAESGERLLEI--SAHDDEILCC 662
Query: 275 HFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY-ANGRHILSAG 333
F A++ + + SAD +K+W ++ G + L H+ C +F G+++L+
Sbjct: 663 TFSADDKYVATCSADKKVKIW--NSRTG--KCLYVYEEHTEQVNCCQFNNRRGQYLLATC 718
Query: 334 QDRAF 338
D +
Sbjct: 719 SDDTY 723
Score = 94 (38.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 37/135 (27%), Positives = 66/135 (48%)
Query: 495 HGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 553
+G IKV GR L SR S+ + L + A D VI++++ V
Sbjct: 988 NGAIKVLRLLDGRVLTSREAYRTSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNECVF-L 1046
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR-QID-AIHVDVSITALSLSPNMD 611
+GH + I DF F E+ K LLS DG++++W++ + + D A H ++ + ++SP+
Sbjct: 1047 KGHKEAIKDFAFLENSK-LLSWSFDGTVKVWNITTGKTEKDFACHRG-AVLSCAVSPDGS 1104
Query: 612 VLATAHVDQNGVYLW 626
++ D+ +W
Sbjct: 1105 RFSSTSADKTAK-IW 1118
Score = 88 (36.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 21/68 (30%), Positives = 34/68 (50%)
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI- 587
L+A I L+++ +L V GHT + FS DG L+S D ++RIW+
Sbjct: 857 LVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWETNK 916
Query: 588 LARQIDAI 595
+ + DA+
Sbjct: 917 VCKSSDAV 924
Score = 87 (35.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD-GQPLLASGASS----GVIS 250
VA +D K+ + N R + L + V F++ GQ LLA+ + +
Sbjct: 671 VATCSADKKVKIWNSRTGKCLYVYEEHTE-QVNCCQFNNRRGQYLLATCSDDTYIKNTVQ 729
Query: 251 IWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+W+L+ + ++ + H NA+ F N+ + S S D ++K+W
Sbjct: 730 LWDLKDKYCRNTMF-GHVNAVSHCRFSPNDDYIASCSTDGTVKLW 773
Score = 76 (31.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 24/109 (22%), Positives = 51/109 (46%)
Query: 237 QPLLASGASSGVISIWNLEKRRLQSVIR---EAHDNAIISLHFFANEPVLMSASADNSIK 293
Q L + +G + + K+ L+++ R H +A+ F + + S AD +++
Sbjct: 580 QAKLRAQRETGTFYLEWINKKSLKNLSRLVVRPHRDAVYHACFSRDRQRIASCGADKTLQ 639
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+F G+ RLL S H LC F A+ +++ + D+ ++++
Sbjct: 640 --VFKAESGE-RLLEI-SAHDDEILCCTFSADDKYVATCSADKKVKIWN 684
Score = 76 (31.8 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 38/194 (19%), Positives = 80/194 (41%)
Query: 160 EGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF 219
+ ++QLW++ K G P D +A +DG + + NV EL T
Sbjct: 725 KNTVQLWDLKDKYCRNTMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTI 784
Query: 220 THS--MRGA----------VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
R A V ++S +L + + ++++ L + + +H
Sbjct: 785 EIKDFFRNADEQQDDVEVLVKCCSWSRSSDTILV--VAKNKLLLFDVTTSNLLTQVIISH 842
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 327
+ I F A + ++ A + SI++W + ++ R GH++ C+ F ++G
Sbjct: 843 HSTIQYCDFCAGDELVAVALSHCSIELWNIKSLS---KVADCR-GHTSWVHCVTFSSDGS 898
Query: 328 HILSAGQDRAFRLF 341
L++ +D+ R++
Sbjct: 899 LFLTSSEDQTIRIW 912
Score = 68 (29.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 38/166 (22%), Positives = 68/166 (40%)
Query: 201 SDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ 260
+D + V E L+ + + + FS+D + +A+ ++ + IWN +
Sbjct: 634 ADKTLQVFKAESGERLLEIS-AHDDEILCCTFSADDK-YVATCSADKKVKIWNSRTGKCL 691
Query: 261 SVIREAHDNAIISLHFF--ANEPVLMSASADNSIK--MWIFDTTDGDPRLLRFRSGH-SA 315
V E H + F + +L + S D IK + ++D D R F GH +A
Sbjct: 692 YVYEE-HTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRNTMF--GHVNA 748
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRA 361
C RF N +I S D +L++V + R + + + A
Sbjct: 749 VSHC-RFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 793
Score = 62 (26.9 bits), Expect = 9.2e-06, Sum P(4) = 9.2e-06
Identities = 28/141 (19%), Positives = 58/141 (41%)
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL-EKRRLQSVIREAHDNAII 272
+ ++ T + S D + A G +G I + L + R L S REA+ ++
Sbjct: 957 DSIIMQTEPQESLICCCCLSEDLK-FAAFGQENGAIKVLRLLDGRVLTS--REAYRTSVQ 1013
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
F + L+S++ D I++W + + F GH F N + +LS
Sbjct: 1014 HCRFTTDCQTLISSAHDAVIQVWNWQLNE-----CVFLKGHKEAIKDFAFLENSK-LLSW 1067
Query: 333 GQDRAFRLFSVIQDQQSRELS 353
D +++++ + ++ +
Sbjct: 1068 SFDGTVKVWNITTGKTEKDFA 1088
Score = 60 (26.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 37/173 (21%), Positives = 69/173 (39%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSL 163
+ I S D + ++ + E L H DD+ D Y V S + +
Sbjct: 627 QRIASCGADKTLQVFKAESGERLLEISAH---DDEILCCTFSADDKY---VATCSADKKV 680
Query: 164 QLWNISTKKKLYEFKGWGXXXXXXXXXPAL-DVVAVGCSDGKIHVHNVR-YDEELVTFTH 221
++WN T K LY ++ + CSD + V+ +D + +
Sbjct: 681 KIWNSRTGKCLYVYEEHTEQVNCCQFNNRRGQYLLATCSDDTYIKNTVQLWDLKDKYCRN 740
Query: 222 SMRGAVTALAFS--SDGQPLLASGASSGVISIWNLEK-RRLQSV-IREAHDNA 270
+M G V A++ S +AS ++ G + +WN+ L+++ I++ NA
Sbjct: 741 TMFGHVNAVSHCRFSPNDDYIASCSTDGTVKLWNVHSANELRTIEIKDFFRNA 793
Score = 46 (21.3 bits), Expect = 9.2e-06, Sum P(4) = 9.2e-06
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKG 179
V V S++LWNI + K+ + +G
Sbjct: 858 VAVALSHCSIELWNIKSLSKVADCRG 883
Score = 42 (19.8 bits), Expect = 7.8e-07, Sum P(3) = 7.8e-07
Identities = 10/37 (27%), Positives = 18/37 (48%)
Query: 69 TFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLFGEH 105
TF+A ++A +V W+ + K L ++ EH
Sbjct: 663 TFSADDKYVATCSADKKVKIWNSRTGKC--LYVYEEH 697
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 174 (66.3 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 58/241 (24%), Positives = 105/241 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW------VNRCMFSGDSNIDSYAS 643
+ H + + PN +LA+ D+ + W V C+ G+ YA
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFWDLEKFQVVSCI-EGEPGPVRYA- 237
Query: 644 GKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRV-PKDSFGLPTFKQQIPDLVTLSLLPK 702
G +V + P V GC+ HR+ + P P F + P S LP+
Sbjct: 238 GSWVVGLSPPP--KVVGCRYGAGVSRSHHRSCSLFPGLPTAFPDFLRPTPH----SRLPR 291
Query: 703 S 703
S
Sbjct: 292 S 292
Score = 169 (64.5 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 69/278 (24%), Positives = 118/278 (42%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKL 135
V K A ++ H++ V+ L+L G + + D + +W+ ++ GH
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT-- 63
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
+P + +T ++ GSQ GS+++W++ K L G P +
Sbjct: 64 ----SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
VA G D I + ++R + + HS AV L FS DG+ LAS A + +W+L
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDL 176
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW------IFDTTDGDPRLLR 308
++ S H + + F NE +L S S+D +I+ W + +G+P +R
Sbjct: 177 TAGKMMSEF-PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVR 235
Query: 309 FRS----GHSAPPLCIRF-YANGRHILSAGQDRAFRLF 341
+ G S PP + Y G +S R+ LF
Sbjct: 236 YAGSWVVGLSPPPKVVGCRYGAG---VSRSHHRSCSLF 270
Score = 143 (55.4 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 45/188 (23%), Positives = 81/188 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 99 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N + S D
Sbjct: 155 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 336 RAFRLFSV 343
R R + +
Sbjct: 211 RTIRFWDL 218
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 92 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 454 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 512 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 571 WLLSSGM-DGSLRIWDV 586
+LL+SG D ++R WD+
Sbjct: 202 YLLASGSSDRTIRFWDL 218
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 140 (54.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 44/155 (28%), Positives = 67/155 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 529
H V +A D T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L + A D IR++ + + H +T FS DG +LSSG D IWD+
Sbjct: 168 LFSSATDAAIRVWSLQDRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSC 227
Query: 590 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 624
+ + V S+ A L P V + V G+Y
Sbjct: 228 QATRTVPVFESVEAAVLLPEEPV-SQLGVKSPGLY 261
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ ++A + + + LLA+G+ +W L + +L V H + + F + VL +A
Sbjct: 482 INSVAIAPNDK-LLATGSQDRTAKLWALPQCQLLGVF-SGHRRGLWCVQFSPMDQVLATA 539
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 540 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNN 595
Query: 347 QQSREL 352
+ R L
Sbjct: 596 ECVRTL 601
Score = 131 (51.2 bits), Expect = 0.00013, P = 0.00013
Identities = 49/192 (25%), Positives = 88/192 (45%)
Query: 123 IEENLAPV-GHVKLDDKFTPTCIMHPDTYLNKVIV---------GSQEGSLQLWNISTKK 172
+ +N AP G + L + T C H D +N V + GSQ+ + +LW + +
Sbjct: 456 LSKNTAPDNGPILLQAQTTQRC--H-DKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQ 512
Query: 173 KLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALA 231
L F G P V+A +DG I + ++ L TF H +V +A
Sbjct: 513 LLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHD--ASVLKVA 570
Query: 232 FSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNS 291
F S G LL+SG S G++ +W ++ + +AH++ + LH + ++ ++D+
Sbjct: 571 FVSRGTQLLSSG-SDGLVKLWTIKNNECVRTL-DAHEDKVWGLHCSRLDDHALTGASDSR 628
Query: 292 IKMWIFDTTDGD 303
+ +W D T+ +
Sbjct: 629 VILWK-DVTEAE 639
Score = 116 (45.9 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/171 (24%), Positives = 73/171 (42%)
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SL 518
G L ++ + H+ ++ VA + L+ + K+W L + L
Sbjct: 465 GPILLQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGL 524
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + ++ +LAT + D I+L+ + ++ FEGH + F G LLSSG D
Sbjct: 525 WCVQFSPMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSD 584
Query: 579 GSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
G +++W + R +DA H D + L S +D A + V LW
Sbjct: 585 GLVKLWTIKNNECVRTLDA-HED-KVWGLHCS-RLDDHALTGASDSRVILW 632
Score = 112 (44.5 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 46/168 (27%), Positives = 76/168 (45%)
Query: 191 PALDVVAVGCSDGKIHVHN-VRYDEELVTFTHSMRGA---VTALAFSSDGQPLLA-SGAS 245
P ++A G DG + V + VR+ TH RG+ V +AF D LL S A+
Sbjct: 119 PTSTLLATGGCDGAVRVWDIVRHYG-----THHFRGSPGVVHLVAFHPDPTRLLLFSSAT 173
Query: 246 SGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPR 305
I +W+L+ R +V+ AH +A+ SL F A+ ++S+ D +W +
Sbjct: 174 DAAIRVWSLQDRSCLAVLT-AHYSAVTSLAFSADGHTMLSSGRDKICIIWDLQSCQATRT 232
Query: 306 LLRFRSGHSA---P--PLC-IRFYANGRHILSAGQDRAFRLFSVIQDQ 347
+ F S +A P P+ + + G + L+AG R++ Q
Sbjct: 233 VPVFESVEAAVLLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQ 280
Score = 96 (38.9 bits), Expect = 8.2e-08, Sum P(2) = 8.2e-08
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXX-XPALDVVAV 198
P M D + G +G++++W+I + F+G G P ++
Sbjct: 111 PVATMAFDPTSTLLATGGCDGAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFS 170
Query: 199 GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+D I V +++ D + + AVT+LAFS+DG +L+SG + IW+L+
Sbjct: 171 SATDAAIRVWSLQ-DRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK-ICIIWDLQ 225
Score = 92 (37.4 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 32/126 (25%), Positives = 58/126 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 283
V +AF LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 112 VATMAFDPTST-LLATGGCDGAVRVWDIVRHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 168
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S++ D +I++W D L + H + + F A+G +LS+G+D+ +
Sbjct: 169 FSSATDAAIRVWSLQ----DRSCLAVLTAHYSAVTSLAFSADGHTMLSSGRDK----ICI 220
Query: 344 IQDQQS 349
I D QS
Sbjct: 221 IWDLQS 226
Score = 91 (37.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 43/193 (22%), Positives = 89/193 (46%)
Query: 484 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEV---GCSLVKIVYHRVNGLLATVADDLVI 539
S ++AG G ++VW+ G+ + ++ + G L G++ T D +
Sbjct: 257 SPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNL 316
Query: 540 RLFDVVALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH 596
L++ +LR+ ++F G+++ + D F ED +++S L+++++ A QI H
Sbjct: 317 LLYEARSLRLQKQFAGYSEEVLDVRFLGPEDSHVVVASNSP-CLKVFELQTSACQILHGH 375
Query: 597 VDVSITALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSV 650
D+ + AL + + A+ DQ+ V +W +N+ C+ G + S + +
Sbjct: 376 TDI-VLALDVFRKGWLFASCAKDQS-VRIWRMNKAGQVMCVAQGSGHTHSVGT---VCCS 430
Query: 651 KMPSVSSVEGCQD 663
++ V G QD
Sbjct: 431 RLKESFLVTGSQD 443
Score = 67 (28.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 25/132 (18%), Positives = 58/132 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+TA S D + +L + + + +++ W ++ + + + H + ++ F +L +
Sbjct: 69 ITAFDLSPDNE-VLVTASRALLLAQWAWQEGSVTRLWKAIHTAPVATMAFDPTSTLLATG 127
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHIL--SAGQDRAFRLFSVI 344
D ++++W G FR L + F+ + +L S+ D A R++S +
Sbjct: 128 GCDGAVRVWDIVRHYGTHH---FRGSPGVVHL-VAFHPDPTRLLLFSSATDAAIRVWS-L 182
Query: 345 QDQQSRELSQRH 356
QD+ + H
Sbjct: 183 QDRSCLAVLTAH 194
Score = 67 (28.6 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 30/166 (18%), Positives = 70/166 (42%)
Query: 155 IVGSQEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH--- 208
+ +G+L++W ++ + +Y + G G VV +D + ++
Sbjct: 263 LTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLTATADHNLLLYEAR 322
Query: 209 NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
++R ++ ++ + V L D ++AS +S + ++ L+ Q I H
Sbjct: 323 SLRLQKQFAGYSEEVLD-VRFLG-PEDSHVVVAS--NSPCLKVFELQTSACQ--ILHGHT 376
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+ +++L F + S + D S+++W + G + SGH+
Sbjct: 377 DIVLALDVFRKGWLFASCAKDQSVRIWRMNKA-GQVMCVAQGSGHT 421
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 113 (44.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 42/165 (25%), Positives = 77/165 (46%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+A G D + + ++ + L T + V +A+S DG+ L+ SG+ SG I WN +
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFT-CKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPK 181
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRL--LRFR--- 310
K L+ H I + + EPV +S+ + ++ + DGD R+ + +
Sbjct: 182 KGELEGSPLTGHKKWITGISW---EPVHLSSPC----RRFVTSSKDGDARIWDITLKKSI 234
Query: 311 ---SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
SGH+ C+++ +G I + QD +++ Q + REL
Sbjct: 235 ICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIREL 278
Score = 109 (43.4 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 36/147 (24%), Positives = 67/147 (45%)
Query: 486 NTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG----LLATVADDLVIRL 541
N+L +S Y +D GR E +L + Y++ G L + +DD + L
Sbjct: 286 NSLALSTEYVLRTGAFDHTGRQYPPNEEKQKALER--YNKTKGDSPERLVSGSDDFTMFL 343
Query: 542 FDV-VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 600
++ V+ + ++ GH + FS DGKW+ S+ D S+R+W+ I + + V
Sbjct: 344 WEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVG 403
Query: 601 -ITALSLSPNMDVLATAHVDQNGVYLW 626
+ +S S + +L + D + +W
Sbjct: 404 PVYQVSWSADSRLLLSGSKDST-LKIW 429
Score = 108 (43.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/115 (25%), Positives = 58/115 (50%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
V + FS DG+ +AS + + +WN + +V R H + + + A+ +L+S
Sbjct: 363 VNHVYFSPDGK-WIASASFDKSVRLWNGITGQFVTVFR-GHVGPVYQVSWSADSRLLLSG 420
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
S D+++K+W T +L + GH+ + + +G ++S G+DR +L+
Sbjct: 421 SKDSTLKIWEIRTK----KLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 103 (41.3 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 30/112 (26%), Positives = 56/112 (50%)
Query: 518 LVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
LV VY +G +A+ + D +RL++ + + V F GH + +S D + LLS
Sbjct: 362 LVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGS 421
Query: 577 MDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
D +L+IW++ + + H D + A+ SP+ + + + D+ + LW
Sbjct: 422 KDSTLKIWEIRTKKLKQDLPGHAD-EVFAVDWSPDGEKVVSGGKDRV-LKLW 471
Score = 90 (36.7 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 41/178 (23%), Positives = 79/178 (44%)
Query: 143 CI-MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS 201
C+ PD ++ GS + +++LW++ T+ L+ KG P + G
Sbjct: 114 CVSFSPDG--KQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSK 171
Query: 202 DGKIHVHNVRYDE-ELVTFTHSMRGAVTALAF-----SSDGQPLLASGASSGVISIWNLE 255
G+I N + E E T + +T +++ SS + + S + G IW++
Sbjct: 172 SGEICCWNPKKGELEGSPLTGHKKW-ITGISWEPVHLSSPCRRFVTS-SKDGDARIWDIT 229
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
++ + H A+ + + + ++ + S D +IKMW +TT G +L+R GH
Sbjct: 230 LKK-SIICLSGHTLAVTCVKW-GGDGIIYTGSQDCTIKMW--ETTQG--KLIRELKGH 281
Score = 70 (29.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
AV ++FS DG+ L ASG+ + +W+L + H N ++++ + + L+S
Sbjct: 111 AVLCVSFSPDGKQL-ASGSGDTTVRLWDLYTETPLFTCK-GHKNWVLTVAWSPDGKHLVS 168
Query: 286 ASADNSIKMW 295
S I W
Sbjct: 169 GSKSGEICCW 178
Score = 67 (28.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/78 (24%), Positives = 37/78 (47%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPV-GHVKLDDKFTPTCIMHPDTYLNKVIVGSQEG 161
G+H++S G + W K E +P+ GH K + + H + + + S++G
Sbjct: 163 GKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPV-HLSSPCRRFVTSSKDG 221
Query: 162 SLQLWNISTKKKLYEFKG 179
++W+I+ KK + G
Sbjct: 222 DARIWDITLKKSIICLSG 239
Score = 63 (27.2 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 17/68 (25%), Positives = 32/68 (47%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A++ + F + L S S D ++++W D P L GH L + + +G
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLW--DLYTETP--LFTCKGHKNWVLTVAWSPDG 163
Query: 327 RHILSAGQ 334
+H++S +
Sbjct: 164 KHLVSGSK 171
Score = 55 (24.4 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLK 509
H G V V+ + + L++S +K+W+ + + LK
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLK 437
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 168 (64.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 64/277 (23%), Positives = 132/277 (47%)
Query: 88 TWSRHSAKVNLLLLF--GEHILSIDIDGNMFIW-AFKG-IEENLAPVGH-VKLDDKFTPT 142
T + HSA ++ + GE + S D + IW A+ G ++ L GH +++ D
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTL--YGHSLEISD----- 86
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
D+ ++++ S + +L++W++ + K L KG P +++ G D
Sbjct: 87 VAWSSDS--SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFD 144
Query: 203 GKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+ + V+ + L T + HS ++A+ F+ +G L+ SG+ G+ IW+ +
Sbjct: 145 ESVKIWEVKTGKCLKTLSAHS--DPISAVNFNCNGS-LIVSGSYDGLCRIWDAASGQCLR 201
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI- 320
+ + + + + F N +++A+ DN++K+W D + G R L+ +GH C+
Sbjct: 202 TLADEGNPPVSFVKFSPNGKYILTATLDNTLKLW--DYSRG--RCLKTYTGHKNEKYCLF 257
Query: 321 -RFYANGRH-ILSAGQDRAFRLFSVIQDQQSRELSQR 355
F GR ++S +D ++++ Q++E+ QR
Sbjct: 258 ASFSVTGRKWVVSGSEDNMVYIWNL----QTKEIVQR 290
Score = 153 (58.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/186 (24%), Positives = 94/186 (50%)
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 518
G+Y +++ Y H+ E+ VA S ++ ++SA +KVWD + G+ LK+ +
Sbjct: 67 GAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFV 126
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
++ + L+ + + D +++++V + ++ H+D I+ F+ +G ++S D
Sbjct: 127 FCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYD 186
Query: 579 GSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLWV---NRCM-- 631
G RIWD + + + + + ++ + SPN + TA +D N + LW RC+
Sbjct: 187 GLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLD-NTLKLWDYSRGRCLKT 245
Query: 632 FSGDSN 637
++G N
Sbjct: 246 YTGHKN 251
Score = 148 (57.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 43/167 (25%), Positives = 83/167 (49%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-L 529
AH+ + V + +L++S Y G ++WD G+ L++ + G V V NG
Sbjct: 163 AHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKY 222
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FSEDG-KWLLSSGMDGSLRIWDV 586
+ T D ++L+D R ++ + GH ++ F FS G KW++S D + IW++
Sbjct: 223 ILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + H DV I+A + P +++A+A ++ + + +W + C
Sbjct: 283 QTKEIVQRLQGHTDVVISA-ACHPTKNIIASAALENDKTIKVWSSDC 328
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 166 (63.5 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 49/187 (26%), Positives = 93/187 (49%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ K++ P +A G GK+++ V ++
Sbjct: 83 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-- 140
Query: 218 TFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
++ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F
Sbjct: 141 EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTF 198
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ +L++AS D IK I+D + L SGH++ L + F + H +S+ D+
Sbjct: 199 SPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 254
Query: 337 AFRLFSV 343
+ +++ V
Sbjct: 255 SVKVWDV 261
Score = 151 (58.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 59/252 (23%), Positives = 111/252 (44%)
Query: 89 WSRHSAKVNLLLLFGEHILSI----DIDGNMFIWAFK-GIEENLAPVGHVKLDDKFTPTC 143
WS ++ ++ + H L I +D ++ +W + G + G V D +T
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV---DAWT--L 112
Query: 144 IMHPDT-YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
PD+ YL G+ G + ++ + + KK Y G P +A G D
Sbjct: 113 AFSPDSQYL---ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169
Query: 203 GKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
G I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAG 226
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H + ++++ F ++ +S+S+D S+K+W D G + H ++
Sbjct: 227 TL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV--GTRTCVHTFFDHQDQVWGVK 281
Query: 322 FYANGRHILSAG 333
+ NG I+S G
Sbjct: 282 YNGNGSKIVSVG 293
Score = 125 (49.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 42/188 (22%), Positives = 76/188 (40%)
Query: 400 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 459
A +W L+N G+ I + P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--K 139
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 518
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 579 GSLRIWDV 586
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 116 (45.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 475 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 530
G +GV + D ++TL I+A D I++WD + G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 591 QIDAI--HVDVSITALSLSPNMDVLATAHVD 619
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 49 (22.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 265 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 295
+AHD+AI S+ + N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVW 47
>DICTYBASE|DDB_G0267982 [details] [associations]
symbol:copA "coatomer protein complex alpha subunit"
species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI vesicle
coat" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000139
"Golgi membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR010714 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0267982 GO:GO:0006886
GenomeReviews:CM000150_GR GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000003
GO:GO:0030126 HSSP:P63005 KO:K05236 InterPro:IPR016391
PIRSF:PIRSF003354 RefSeq:XP_647464.1 ProteinModelPortal:Q55FR9
STRING:Q55FR9 EnsemblProtists:DDB0233797 GeneID:8616271
KEGG:ddi:DDB_G0267982 OMA:FWVLGAH ProtClustDB:CLSZ2846951
Uniprot:Q55FR9
Length = 1221
Score = 136 (52.9 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 41/170 (24%), Positives = 72/170 (42%)
Query: 174 LYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFS 233
LY+F+ P + G IH+++ R L F G V + F
Sbjct: 2 LYKFETKASRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEH-EGPVRGINFH 60
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
QPL SG I +WN ++RR ++ H + I S+ F P ++S+S D I+
Sbjct: 61 MT-QPLFVSGGDDYKIKVWNYKQRRCLFTLK-GHKDYIRSVEFHREAPWIVSSSDDMVIR 118
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+W + + L +GH+ + F+ ++SA D+ R++ +
Sbjct: 119 IWNWQSRTCIAEL----NGHNHYVMSALFHPKDDLVVSASLDQTIRIWDI 164
Score = 136 (52.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 31/115 (26%), Positives = 57/115 (49%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLA 531
H G V G+ T L +S G IKVW++K R + ++ V +HR +
Sbjct: 50 HEGPVRGINFHMTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIV 109
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ +DD+VIR+++ + + + GH + F ++S+ +D ++RIWD+
Sbjct: 110 SSSDDMVIRIWNWQSRTCIAELNGHNHYVMSALFHPKDDLVVSASLDQTIRIWDI 164
Score = 125 (49.1 bits), Expect = 0.00093, P = 0.00093
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 477 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLATVAD 535
V G++ T ++++ + G I ++D++ + L +++ V+ I +H L + D
Sbjct: 12 VKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQPLFVSGGD 71
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 595
D I++++ R + +GH D I F + W++SS D +RIW+ I +
Sbjct: 72 DYKIKVWNYKQRRCLFTLKGHKDYIRSVEFHREAPWIVSSSDDMVIRIWNWQSRTCIAEL 131
Query: 596 --HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
H ++AL P D++ +A +DQ + +W
Sbjct: 132 NGHNHYVMSAL-FHPKDDLVVSASLDQT-IRIW 162
Score = 104 (41.7 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 33/143 (23%), Positives = 62/143 (43%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ GS+ L++ K L +F + G D KI V N Y
Sbjct: 24 ILASLHSGSIHLYDYRIKTLLEKFDEHEGPVRGINFHMTQPLFVSGGDDYKIKVWN--YK 81
Query: 214 EELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ FT + + ++ F + P + S + VI IWN + R + + H++ ++
Sbjct: 82 QRRCLFTLKGHKDYIRSVEFHREA-PWIVSSSDDMVIRIWNWQSRTCIAELN-GHNHYVM 139
Query: 273 SLHFFANEPVLMSASADNSIKMW 295
S F + +++SAS D +I++W
Sbjct: 140 SALFHPKDDLVVSASLDQTIRIW 162
Score = 94 (38.1 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 29/120 (24%), Positives = 56/120 (46%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H + + +DD ++L+ + +V F GH + ++ F ++S+ D ++R
Sbjct: 212 FHPTQPYIVSASDDHQVKLWRMND-PIVDTFRGHYNNVSCALFHPRQDLIISNSEDKTIR 270
Query: 583 IWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVY-LWVNRCMF--SGDSNI 638
+WD+I + I D L+ PN ++ A H V+ L R +F +GDS +
Sbjct: 271 VWDIIKKSTVHMIRRDHDRFWTLASHPNQNLFAAGHDSGMIVFKLERERPLFVQNGDSGV 330
Score = 62 (26.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 27/126 (21%), Positives = 52/126 (41%)
Query: 464 DMSER-SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR---DLKSRWE-VGCSL 518
D+S R S H+ V + T ++SA +K+W + + V C+L
Sbjct: 193 DISVRLSLEGHDRGVNWASFHPTQPYIVSASDDHQVKLWRMNDPIVDTFRGHYNNVSCAL 252
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+H L+ + ++D IR++D++ V DR S + L ++G D
Sbjct: 253 ----FHPRQDLIISNSEDKTIRVWDIIKKSTVHMIRRDHDRFWTLA-SHPNQNLFAAGHD 307
Query: 579 GSLRIW 584
+ ++
Sbjct: 308 SGMIVF 313
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 126 (49.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 23/99 (23%), Positives = 52/99 (52%)
Query: 488 LMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
L+ + G +K+WD + + ++ ++ + ++ + + + D I+++D+
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
++ GH D +T S +G +LLS+ MD ++R+WDV
Sbjct: 227 KLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 40/178 (22%), Positives = 79/178 (44%)
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGR-DLKSR 511
LQ+G R S L H GEV + + SAG+ I +W G D +
Sbjct: 46 LQTGPPRCSSLQAPIMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYAT 105
Query: 512 WEVGCSLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDG 569
+ V +++ +G +L + + D + ++D V++ +GHT + C+ + G
Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-CYPARRG 164
Query: 570 KWLLSSGMD-GSLRIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L+ +G D G++++WD+ I + A++ + D + + +D N + +W
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGID-NDIKVW 221
Score = 90 (36.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 24/91 (26%), Positives = 46/91 (50%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V F +G L ++G +I +W++ + H A++ LH+ + +L
Sbjct: 68 GEVYCCKFHPNGSTLASAGFDR-LILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
SAS D ++ +W D+ G+ R+ R + GH++
Sbjct: 127 SASTDKTVAVW--DSETGE-RVKRLK-GHTS 153
Score = 86 (35.3 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 33/129 (25%), Positives = 53/129 (41%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S+ + L + A
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNA 255
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++DV R V+ F+G+ C +S DG + + D L W
Sbjct: 256 MDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPWHS 315
Query: 587 ILARQIDAI 595
+ R + I
Sbjct: 316 LSVRSLGQI 324
Score = 76 (31.8 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SGH C +F+ NG + SAG DR L+SV D
Sbjct: 64 SGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGD 99
Score = 65 (27.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 18/76 (23%), Positives = 31/76 (40%)
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFRSGHSAPPLCI 320
++ H+ + F N L SA D I +W ++ D L GHS + +
Sbjct: 61 MLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATL----KGHSGAVMEL 116
Query: 321 RFYANGRHILSAGQDR 336
+ +G + SA D+
Sbjct: 117 HYNTDGSMLFSASTDK 132
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 49/185 (26%), Positives = 92/185 (49%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ T K++ P +A G GK+++ V ++
Sbjct: 83 SLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKK-- 140
Query: 218 TFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
++ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F
Sbjct: 141 EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTF 198
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ +L++AS D IK I+D + L SGH + L + F + H +S+ D+
Sbjct: 199 SPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHGSWVLNVAFCPDDTHFVSSSSDK 254
Query: 337 AFRLF 341
+ +++
Sbjct: 255 SVKVW 259
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/196 (23%), Positives = 90/196 (45%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PD+ + GS G + ++ + T KK Y G P +A G DG I+
Sbjct: 116 PDSQF--LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 207 VHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++ + L T H+M + +L FS D Q LL + + G I I++++ L +
Sbjct: 174 IFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGTL-S 229
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
H + ++++ F ++ +S+S+D S+K+W D G + H +++ +
Sbjct: 230 GHGSWVLNVAFCPDDTHFVSSSSDKSVKVW--DA--GTRTCVHTFFDHQDQVWGVKYNGS 285
Query: 326 GRHILSAGQDRAFRLF 341
G I+S G D+ ++
Sbjct: 286 GSKIVSVGDDQEIHIY 301
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 531
H VV V T ++ S+ I++WD + G+ +KS + + + LA
Sbjct: 63 HQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLA 122
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
T + + +F V + + I +S DGK+L S +DG + I+D+ +
Sbjct: 123 TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVD 619
+ + H + I +L+ SP+ +L TA D
Sbjct: 183 LHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 111 (44.1 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 38/181 (20%), Positives = 73/181 (40%)
Query: 406 RLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDM 465
RL + G+ I + P + S F G+ G + F +++G + Y +
Sbjct: 89 RLWDLETGKQI-KSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETG--KKEY-SL 144
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYH 524
R + ++ +A + S G I ++D G+ L + + + +
Sbjct: 145 DTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 525 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ LL T +DD I+++DV + GH + + F D +SS D S+++W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 585 D 585
D
Sbjct: 260 D 260
Score = 110 (43.8 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 484 STNTLMISAGYH-GDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRL 541
S ++ ++ G H G + ++ + G+ S G ++ I Y LA+ A D +I +
Sbjct: 115 SPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Query: 542 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
FD+ +++ EGH I FS D + L+++ DG ++I+DV
Sbjct: 175 FDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 80 (33.2 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 235 DGQPLLASGASSGVISIW--NLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 292
DG + SG+ ++ +W N EK LQ + E H ++S+ + S+S D I
Sbjct: 30 DGSETVISGSLDDLVKVWKWNDEKLDLQWTL-EGHQLGVVSVDISHTGSIAASSSLDAHI 88
Query: 293 KMWIFDT 299
++W +T
Sbjct: 89 RLWDLET 95
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 265 EAHDNAIISLHFFANEP----VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI 320
+AHD+AI S+ + N+ ++S S D+ +K+W ++ D L GH + +
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWNDEKLD--LQWTLEGHQLGVVSV 70
Query: 321 RFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
G S+ D RL+ + +Q + +
Sbjct: 71 DISHTGSIAASSSLDAHIRLWDLETGKQIKSI 102
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 49/185 (26%), Positives = 92/185 (49%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ T K++ P +A G GK+++ V ++
Sbjct: 83 SLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETGKK-- 140
Query: 218 TFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
++ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F
Sbjct: 141 EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTF 198
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ +L++AS D IK I+D + L SGH + L + F + H +S+ D+
Sbjct: 199 SPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHGSWVLNVAFCPDDTHFVSSSSDK 254
Query: 337 AFRLF 341
+ +++
Sbjct: 255 SVKVW 259
Score = 159 (61.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 47/196 (23%), Positives = 90/196 (45%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PD+ + GS G + ++ + T KK Y G P +A G DG I+
Sbjct: 116 PDSQF--LATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 173
Query: 207 VHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++ + L T H+M + +L FS D Q LL + + G I I++++ L +
Sbjct: 174 IFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGTL-S 229
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
H + ++++ F ++ +S+S+D S+K+W D G + H +++ +
Sbjct: 230 GHGSWVLNVAFCPDDTHFVSSSSDKSVKVW--DA--GTRTCVHTFFDHQDQVWGVKYNGS 285
Query: 326 GRHILSAGQDRAFRLF 341
G I+S G D+ ++
Sbjct: 286 GSKIVSVGDDQEIHIY 301
Score = 120 (47.3 bits), Expect = 0.00043, P = 0.00043
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 531
H VV V T ++ S+ I++WD + G+ +KS + + + LA
Sbjct: 63 HQLGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSPDSQFLA 122
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
T + + +F V + + I +S DGK+L S +DG + I+D+ +
Sbjct: 123 TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL 182
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVD 619
+ + H + I +L+ SP+ +L TA D
Sbjct: 183 LHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 111 (44.1 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 38/181 (20%), Positives = 73/181 (40%)
Query: 406 RLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDM 465
RL + G+ I + P + S F G+ G + F +++G + Y +
Sbjct: 89 RLWDLETGKQI-KSIDAGPVDAWSLAFSPDSQFLATGSHVGKVNIFGVETG--KKEY-SL 144
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYH 524
R + ++ +A + S G I ++D G+ L + + + +
Sbjct: 145 DTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 525 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ LL T +DD I+++DV + GH + + F D +SS D S+++W
Sbjct: 200 PDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Query: 585 D 585
D
Sbjct: 260 D 260
Score = 110 (43.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 29/105 (27%), Positives = 54/105 (51%)
Query: 484 STNTLMISAGYH-GDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRL 541
S ++ ++ G H G + ++ + G+ S G ++ I Y LA+ A D +I +
Sbjct: 115 SPDSQFLATGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINI 174
Query: 542 FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
FD+ +++ EGH I FS D + L+++ DG ++I+DV
Sbjct: 175 FDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDV 219
Score = 75 (31.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 235 DGQPLLASGASSGVISIW--NLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSI 292
+G + SG+ ++ +W N EK LQ + E H ++S+ + S+S D I
Sbjct: 30 NGSETVISGSLDDLVKVWKWNDEKLDLQWTL-EGHQLGVVSVDISHTGSIAASSSLDAHI 88
Query: 293 KMWIFDT 299
++W +T
Sbjct: 89 RLWDLET 95
Score = 59 (25.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 22/92 (23%), Positives = 42/92 (45%)
Query: 265 EAHDNAIISLHFFANEP----VLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI 320
+AHD+AI S+ + N+ ++S S D+ +K+W ++ D L GH + +
Sbjct: 13 QAHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWKWNDEKLD--LQWTLEGHQLGVVSV 70
Query: 321 RFYANGRHILSAGQDRAFRLFSVIQDQQSREL 352
G S+ D RL+ + +Q + +
Sbjct: 71 DISHTGSIAASSSLDAHIRLWDLETGKQIKSI 102
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 49/187 (26%), Positives = 93/187 (49%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ K++ P +A G GK+++ V ++
Sbjct: 83 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-- 140
Query: 218 TFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
++ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F
Sbjct: 141 EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTF 198
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ +L++AS D IK I+D + L SGH++ L + F + H +S+ D+
Sbjct: 199 SPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 254
Query: 337 AFRLFSV 343
+ +++ V
Sbjct: 255 SVKVWDV 261
Score = 162 (62.1 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 60/260 (23%), Positives = 115/260 (44%)
Query: 89 WSRHSAKVNLLLLFGEHILSI----DIDGNMFIWAFK-GIEENLAPVGHVKLDDKFTPTC 143
WS ++ ++ + H L I +D ++ +W + G + G V D +T
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV---DAWT--L 112
Query: 144 IMHPDT-YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
PD+ YL G+ G + ++ + + KK Y G P +A G D
Sbjct: 113 AFSPDSQYL---ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169
Query: 203 GKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
G I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAG 226
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H + ++++ F ++ +S+S+D S+K+W D G + H ++
Sbjct: 227 TL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV--GTRTCVHTFFDHQDQVWGVK 281
Query: 322 FYANGRHILSAGQDRAFRLF 341
+ NG I+S G D+ ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHIY 301
Score = 125 (49.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 42/188 (22%), Positives = 76/188 (40%)
Query: 400 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 459
A +W L+N G+ I + P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--K 139
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 518
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 579 GSLRIWDV 586
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 116 (45.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 475 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 530
G +GV + D ++TL I+A D I++WD + G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 591 QIDAI--HVDVSITALSLSPNMDVLATAHVD 619
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 68 (29.0 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 18/75 (24%), Positives = 37/75 (49%)
Query: 226 AVTALAFSS---DGQPLLASGASSGVISIWNL--EKRRLQSVIREAHDNAIISLHFFANE 280
A+ ++A+ S + + +G+ ++ +W EK LQ + E H ++S+
Sbjct: 18 AIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSL-EGHQLGVVSVDISHTL 76
Query: 281 PVLMSASADNSIKMW 295
P+ S+S D I++W
Sbjct: 77 PIAASSSLDAHIRLW 91
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 265 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 295
+AHD+AI S+ + +N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVW 47
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 49/187 (26%), Positives = 93/187 (49%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ K++ P +A G GK+++ V ++
Sbjct: 83 SLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-- 140
Query: 218 TFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
++ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F
Sbjct: 141 EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTF 198
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ +L++AS D IK I+D + L SGH++ L + F + H +S+ D+
Sbjct: 199 SPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 254
Query: 337 AFRLFSV 343
+ +++ V
Sbjct: 255 SVKVWDV 261
Score = 162 (62.1 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 60/260 (23%), Positives = 115/260 (44%)
Query: 89 WSRHSAKVNLLLLFGEHILSI----DIDGNMFIWAFK-GIEENLAPVGHVKLDDKFTPTC 143
WS ++ ++ + H L I +D ++ +W + G + G V D +T
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV---DAWT--L 112
Query: 144 IMHPDT-YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
PD+ YL G+ G + ++ + + KK Y G P +A G D
Sbjct: 113 AFSPDSQYL---ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169
Query: 203 GKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
G I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAG 226
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H + ++++ F ++ +S+S+D S+K+W D G + H ++
Sbjct: 227 TL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV--GTRTCVHTFFDHQDQVWGVK 281
Query: 322 FYANGRHILSAGQDRAFRLF 341
+ NG I+S G D+ ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHIY 301
Score = 125 (49.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 42/188 (22%), Positives = 76/188 (40%)
Query: 400 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 459
A +W L+N G+ I + P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--K 139
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 518
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 579 GSLRIWDV 586
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 116 (45.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 40/151 (26%), Positives = 72/151 (47%)
Query: 475 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 530
G +GV + D ++TL I+A D I++WD + G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 591 QIDAI--HVDVSITALSLSPNMDVLATAHVD 619
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 65 (27.9 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 13/57 (22%), Positives = 26/57 (45%)
Query: 240 LASGASSGVISIWNLEKRRLQ-SVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+ +G+ ++ +W RL E H ++S+ P+ S+S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Score = 49 (22.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 265 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 295
+AHD+AI S+ + N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVW 47
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 49/187 (26%), Positives = 93/187 (49%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S + ++LW++ K++ P +A G GK+++ V ++
Sbjct: 83 SLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK-- 140
Query: 218 TFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
++ RG + ++A+S DG+ LASGA G+I+I+++ +L + E H I SL F
Sbjct: 141 EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKLLHTL-EGHAMPIRSLTF 198
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+ +L++AS D IK I+D + L SGH++ L + F + H +S+ D+
Sbjct: 199 SPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 254
Query: 337 AFRLFSV 343
+ +++ V
Sbjct: 255 SVKVWDV 261
Score = 160 (61.4 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 60/260 (23%), Positives = 114/260 (43%)
Query: 89 WSRHSAKVNLLLLFGEHILSI----DIDGNMFIWAF-KGIEENLAPVGHVKLDDKFTPTC 143
WS ++ ++ + H L I +D ++ +W G + G V D +T
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPV---DAWT--L 112
Query: 144 IMHPDT-YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
PD+ YL G+ G + ++ + + KK Y G P +A G D
Sbjct: 113 AFSPDSQYL---ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169
Query: 203 GKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
G I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 170 GIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAG 226
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H + ++++ F ++ +S+S+D S+K+W D G + H ++
Sbjct: 227 TL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV--GTRTCVHTFFDHQDQVWGVK 281
Query: 322 FYANGRHILSAGQDRAFRLF 341
+ NG I+S G D+ ++
Sbjct: 282 YNGNGSKIVSVGDDQEIHVY 301
Score = 123 (48.4 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 42/188 (22%), Positives = 75/188 (39%)
Query: 400 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 459
A +W L N G+ I + P S + GT G + F ++SG +
Sbjct: 86 AHIRLWDLDN---GKQI-KSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--K 139
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 518
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 579 GSLRIWDV 586
S+++WDV
Sbjct: 254 KSVKVWDV 261
Score = 115 (45.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 40/151 (26%), Positives = 71/151 (47%)
Query: 475 GEVVGV-ACDSTNTLMISAGYHGD--IKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLL 530
G +GV + D ++TL I+A D I++WD G+ +KS + + + L
Sbjct: 62 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYL 121
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
AT + +F V + + + I +S DGK+L S +DG + I+D+ +
Sbjct: 122 ATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGK 181
Query: 591 QIDAI--HVDVSITALSLSPNMDVLATAHVD 619
+ + H + I +L+ SP+ +L TA D
Sbjct: 182 LLHTLEGHA-MPIRSLTFSPDSQLLVTASDD 211
Score = 65 (27.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 240 LASGASSGVISIWNL--EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIF 297
+ +G+ ++ +W E+ LQ + E H ++S+ P+ S+S D I++W
Sbjct: 35 VVTGSLDDLVKVWKWCDERLDLQWSL-EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDL 93
Query: 298 D 298
D
Sbjct: 94 D 94
Score = 49 (22.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 265 EAHDNAIISLHFFANEP----VLMSASADNSIKMW 295
+AHD+AI S+ + N+ +++ S D+ +K+W
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVW 47
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 166 (63.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 66/269 (24%), Positives = 125/269 (46%)
Query: 81 KRAHQVATWS---RHSAKVNLLLLFGEHILSIDIDGNMFIWAFKG--IEENLAPVGHVKL 135
++AH A WS + K N+ E +++ +D + +W ++ +E + GH +L
Sbjct: 12 EQAHDDAIWSVAWETNKKENI-----ETVVTGSLDDLVKVWKWRDERLELQWSLEGH-QL 65
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
I H L S + ++LW++ K++ P
Sbjct: 66 G--VVSVDISHT---LPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSPDSQH 120
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNL 254
+A G GK+++ V ++ ++ RG + ++A+S DG+ LASGA G+I+I+++
Sbjct: 121 LATGTHMGKVNIFGVESGKK--EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDI 177
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+L + E H I SL F + +L++AS D IK I+D + L SGH+
Sbjct: 178 ATGKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIK--IYDVQHAN--LAGTLSGHA 232
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ L + F + H +S+ D++ +++ V
Sbjct: 233 SWVLNVAFCPDDTHFVSSSSDKSVKVWDV 261
Score = 163 (62.4 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 58/259 (22%), Positives = 114/259 (44%)
Query: 89 WSRHSAKVNLLLLFGEHILSI----DIDGNMFIWAFK-GIEENLAPVGHVKLDDKFTPTC 143
WS ++ ++ + H L I +D ++ +W + G + G V D +T
Sbjct: 58 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPV---DAWT--L 112
Query: 144 IMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDG 203
PD+ + G+ G + ++ + + KK Y G P +A G DG
Sbjct: 113 AFSPDS--QHLATGTHMGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG 170
Query: 204 KIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV 262
I++ ++ + L T H+M + +L FS D Q LL + + G I I++++ L
Sbjct: 171 IINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHANLAGT 227
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 322
+ H + ++++ F ++ +S+S+D S+K+W D G + H +++
Sbjct: 228 L-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVW--DV--GTRTCIHTFFDHQDQVWGVKY 282
Query: 323 YANGRHILSAGQDRAFRLF 341
NG I+S G D+ ++
Sbjct: 283 NGNGSKIVSVGDDQEIHVY 301
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 41/188 (21%), Positives = 75/188 (39%)
Query: 400 AQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISR 459
A +W L+N G+ ++ P S GT G + F ++SG +
Sbjct: 86 AHIRLWDLEN---GKQ-MKSIDAGPVDAWTLAFSPDSQHLATGTHMGKVNIFGVESG--K 139
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSL 518
Y + R + ++ +A + S G I ++D G+ L + +
Sbjct: 140 KEY-SLDTRGKF-----ILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 193
Query: 519 VKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ + + LL T +DD I+++DV + GH + + F D +SS D
Sbjct: 194 RSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 253
Query: 579 GSLRIWDV 586
S+++WDV
Sbjct: 254 KSVKVWDV 261
>WB|WBGene00022119 [details] [associations]
symbol:Y71F9AL.17 species:6239 "Caenorhabditis elegans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 Pfam:PF06957 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0040010
GO:GO:0006915 GO:GO:0006886 GO:GO:0003824 GO:GO:0002119
GO:GO:0032940 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0000003
GO:GO:0008152 GO:GO:0030126 EMBL:FO081777 HOGENOM:HOG000195913
KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OMA:YDQHNPF SUPFAM:SSF50952
RefSeq:NP_491069.1 ProteinModelPortal:Q9N4H7 SMR:Q9N4H7
DIP:DIP-24621N IntAct:Q9N4H7 MINT:MINT-1075577 STRING:Q9N4H7
PaxDb:Q9N4H7 EnsemblMetazoa:Y71F9AL.17 GeneID:171860
KEGG:cel:CELE_Y71F9AL.17 UCSC:Y71F9AL.17 CTD:171860
WormBase:Y71F9AL.17 InParanoid:Q9N4H7 NextBio:873005 Uniprot:Q9N4H7
Length = 1232
Score = 125 (49.1 bits), Expect = 0.00094, P = 0.00094
Identities = 37/156 (23%), Positives = 74/156 (47%)
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVK-IVYHRVNGLLAT 532
+ V G++ T ++++ + G I++WD++ L +++ V+ I +H + +
Sbjct: 11 SARVKGISFHPTRPWVLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQPIFVS 70
Query: 533 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQI 592
DD I++++ R + GH D I F W++S+ D ++RIW+ I
Sbjct: 71 GGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSI 130
Query: 593 DAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ H + A P D++A+A +DQ V +W
Sbjct: 131 AILTGHNHYVMCA-QFHPTEDLVASASLDQT-VRVW 164
Score = 119 (46.9 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
G V + F D QP+ SG I +WN +++R + H + I + F P ++
Sbjct: 54 GPVRGICFHHD-QPIFVSGGDDYKIKVWNYKQKRCIFTLL-GHLDYIRTTFFHHKYPWII 111
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
SAS D ++++W + + + + +GH+ +C +F+ + SA D+ R++ +
Sbjct: 112 SASDDQTVRIWNWQSRNS----IAILTGHNHYVMCAQFHPTEDLVASASLDQTVRVWDI 166
Score = 111 (44.1 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 29/148 (19%), Positives = 67/148 (45%)
Query: 521 IVYHRVNGLLATVADDLVIRL--FDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD 578
+ +H N +L + +DD +++ ++ + GH + ++ F + +LS+ D
Sbjct: 213 VAFHHTNPILVSGSDDRQVKIWRYNETKAWELDSCRGHYNNVSSVIFHPNADLILSNSED 272
Query: 579 GSLRIWDVILARQIDAI-HVDVSITALSLSPNMDVLATAHVDQNGVYLWV---NRCMFSG 634
S+R+WD+ + H + L+ P++++ A H NG+ ++ R +
Sbjct: 273 KSIRVWDMQKRTSLHVFRHENERFWVLAAHPSLNMFAAGH--DNGMVVFKIQRERPAYCV 330
Query: 635 DSNIDSYASGKEIVSVKMPSVSSVEGCQ 662
N+ Y G++I + + + V C+
Sbjct: 331 SDNLVFYVKGQQIRKLDLTTNKDVALCK 358
Score = 96 (38.9 bits), Expect = 7.3e-07, Sum P(2) = 7.3e-07
Identities = 31/142 (21%), Positives = 55/142 (38%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
V+ G +QLW+ L +F + G D KI V N Y
Sbjct: 26 VLTSLHSGVIQLWDYRMCVLLEKFDEHDGPVRGICFHHDQPIFVSGGDDYKIKVWN--YK 83
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
++ FT F P + S + + IWN + R +++ H++ ++
Sbjct: 84 QKRCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIWNWQSRNSIAILT-GHNHYVMC 142
Query: 274 LHFFANEPVLMSASADNSIKMW 295
F E ++ SAS D ++++W
Sbjct: 143 AQFHPTEDLVASASLDQTVRVW 164
Score = 88 (36.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 31/127 (24%), Positives = 54/127 (42%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
L+ F S V ++F +P + + SGVI +W+ L E HD + +
Sbjct: 4 LIKF-ESKSARVKGISFHPT-RPWVLTSLHSGVIQLWDYRMCVLLEKFDE-HDGPVRGIC 60
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F ++P+ +S D IK+W + R + GH F+ I+SA D
Sbjct: 61 FHHDQPIFVSGGDDYKIKVWNYK----QKRCIFTLLGHLDYIRTTFFHHKYPWIISASDD 116
Query: 336 RAFRLFS 342
+ R+++
Sbjct: 117 QTVRIWN 123
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/112 (26%), Positives = 61/112 (54%)
Query: 517 SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
S+ ++++H + L+ + ++D IR++D R +GHTD + D F GK L S
Sbjct: 110 SITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCS 169
Query: 577 MDGSLRIWDVILARQ-IDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D S+++WD + + I +H D ++++++ P D + +A D+ + +W
Sbjct: 170 ADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRT-IKMW 220
Score = 126 (49.4 bits), Expect = 0.00017, P = 0.00017
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-G---RDLKSRWEVGCSLVKIVYHRVNG 528
H + V LM+SA I++WDF+ G R LK + S+ + +
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTD---SVQDVAFDAQGK 163
Query: 529 LLATVADDLVIRLFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
LLA+ + DL I+L+D + ++ GH ++ F G ++LS+ D ++++W+V
Sbjct: 164 LLASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Score = 120 (47.3 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R ++T + F L+ S + I IW+ E + ++ H +++ + F A +L
Sbjct: 108 RASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYERSLK-GHTDSVQDVAFDAQGKLL 165
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S SAD SIK+W F + ++ GH + F G ++LSA +DR +++ V
Sbjct: 166 ASCSADLSIKLWDFQQSY---ECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEV 222
Score = 105 (42.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/133 (24%), Positives = 63/133 (47%)
Query: 212 YDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
+D E + S++G +V +AF + G+ LLAS ++ I +W+ ++ HD
Sbjct: 135 WDFETGEYERSLKGHTDSVQDVAFDAQGK-LLASCSADLSIKLWDFQQSYECIKTMHGHD 193
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
+ + S+ F ++SAS D +IKMW + G ++ +GH +R + G
Sbjct: 194 HNVSSVAFVPAGDYVLSASRDRTIKMW--EVATG--YCVKTYTGHREWVRMVRVHIEGSI 249
Query: 329 ILSAGQDRAFRLF 341
+ D+ R++
Sbjct: 250 FATCSNDQTIRVW 262
Score = 98 (39.6 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 26/104 (25%), Positives = 48/104 (46%)
Query: 524 HRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRI 583
H LA+ + D IR++DV + GH + + F GK+L+S+ D ++R+
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 584 WDVILARQIDAIHVDVSI-TALSLSPNMDVLATAHVDQNGVYLW 626
WD+ R + ++ T++ + + VDQ V +W
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT-VKVW 408
Score = 75 (31.5 bits), Expect = 7.0e-07, Sum P(2) = 7.0e-07
Identities = 14/65 (21%), Positives = 33/65 (50%)
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ +H L + +DD IR++D+ R ++ H T F + +++S +D +
Sbjct: 345 LAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQT 404
Query: 581 LRIWD 585
+++W+
Sbjct: 405 VKVWE 409
Score = 75 (31.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 30/159 (18%), Positives = 62/159 (38%)
Query: 144 IMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-D 202
I HP L ++ S++ ++++W+ T + KG A + CS D
Sbjct: 115 IFHPIFAL--MVSASEDATIRIWDFETGEYERSLKGH-TDSVQDVAFDAQGKLLASCSAD 171
Query: 203 GKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV 262
I + + + E + H V+++AF G +L S + I +W +
Sbjct: 172 LSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVL-SASRDRTIKMWEVATGYCVKT 230
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTD 301
H + + + + S D +I++W+ ++ D
Sbjct: 231 YT-GHREWVRMVRVHIEGSIFATCSNDQTIRVWLTNSKD 268
Score = 74 (31.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H +I + F +++SAS D +I++W F+T + + R L+ GH+ + F A G
Sbjct: 107 HRASITRVIFHPIFALMVSASEDATIRIWDFETGEYE-RSLK---GHTDSVQDVAFDAQG 162
Query: 327 RHILSAGQDRAFRLFSVIQDQQSRE 351
+ + S D + +L+ QQS E
Sbjct: 163 KLLASCSADLSIKLWDF---QQSYE 184
Score = 55 (24.4 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H+ V G+A ++SA I+VWD + R +K+ + I +H+ + +
Sbjct: 338 HDNWVRGLAFHPGGKYLVSASDDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVI 397
Query: 532 TVADDLVIRLFD 543
+ + D +++++
Sbjct: 398 SGSVDQTVKVWE 409
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 122 (48.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 37/146 (25%), Positives = 70/146 (47%)
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVI 263
++ N++ LV H+ AV FS DGQ + + GA + ++ E +L +
Sbjct: 600 VNKKNMKNLSRLVVRPHT--DAVYHACFSEDGQRIASCGADK-TLQVFKAETGEKLLEI- 655
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
+AH++ ++ F A++ + + S D +K+W ++ G+ L+R HS C F
Sbjct: 656 -KAHEDEVLCCAFSADDKFIATCSVDKKVKIW--NSMTGE--LVRIYDEHSEQVNCCHFT 710
Query: 324 ANGRHILSA--GQDRAFRLFSVIQDQ 347
N H+L A D +L+ + Q++
Sbjct: 711 NNSNHLLLATGSNDYFLKLWDLNQEE 736
Score = 120 (47.3 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 56/242 (23%), Positives = 98/242 (40%)
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVHNVRYDEELVTFT 220
+LQ++ T +KL E K A D CS D K+ + N ELV
Sbjct: 640 TLQVFKAETGEKLLEIKAHEDEVLCCAFS-ADDKFIATCSVDKKVKIWN-SMTGELVRIY 697
Query: 221 HSMRGAVTALAFSSDGQPLL-ASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFAN 279
V F+++ LL A+G++ + +W+L + ++ + H N++ F +
Sbjct: 698 DEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMF-GHTNSVSHCRFSPD 756
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPR----LLRFRSGHSAPP-------LCIRFYANGRH 328
+ VL S SAD ++K+W D + R + +F P C + A+G
Sbjct: 757 DQVLASCSADGTLKLW--DVKSANERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAK 814
Query: 329 ILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARXXXXXXXXXXXXPVIAFD--CAEIRE 386
I+ A +++ F LF + S L++ H+ + V+A C E+
Sbjct: 815 IMVAAKNKVF-LFDI---HSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWS 870
Query: 387 RD 388
D
Sbjct: 871 MD 872
Score = 108 (43.1 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 47/170 (27%), Positives = 72/170 (42%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL--KSRWEVGCSLVKIVYH 524
E+ H V+ S T S K+W F+ + R GC V+
Sbjct: 1080 EKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELRGHKGC--VRCSSF 1137
Query: 525 RVNG-LLATVADDLVIRLFDVV---ALRMVRKF---EG---HTDRITDFCFSEDGKWLLS 574
VN LLAT D+ IR+++V L + EG H +TD CFS D K L+S
Sbjct: 1138 SVNNTLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVS 1197
Query: 575 SGMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 623
+G G L+ W+V+ + + ++ + +SP+ T VD G+
Sbjct: 1198 AG--GYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVT--VDNLGI 1243
Score = 93 (37.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 35/164 (21%), Positives = 69/164 (42%)
Query: 468 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYH 524
+S H V + + +IS+ +++W+++ D L++ E VK
Sbjct: 999 QSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQSEDPFFLQAHQET----VKDFRL 1054
Query: 525 RVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
N L + + D +++++++ R+ + F H D + S D S+ D + +IW
Sbjct: 1055 LKNSRLLSWSFDGTVKVWNIITRRIEKDFVCHQDTVLSCDISSDATKFSSTSADKTAKIW 1114
Query: 585 DVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNG-VYLW 626
L + + + S S N +LAT D NG + +W
Sbjct: 1115 SFELLSPLHELRGHKGCVRCSSFSVNNTLLATG--DDNGEIRIW 1156
Score = 88 (36.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 240 LASGASSGVISIWNLEKRRL-QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFD 298
LA G G I I L R+ QS R H + + F A+ L+S+S D+++++W +
Sbjct: 978 LAFGGEDGAIQILELLNNRIFQS--RNGHKTTVRHIQFTADGKTLISSSDDSAVQIWNWQ 1035
Query: 299 TTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVI 344
+ D P L+ H R N R +LS D +++++I
Sbjct: 1036 SED--PFFLQ---AHQETVKDFRLLKNSR-LLSWSFDGTVKVWNII 1075
Score = 83 (34.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 39/198 (19%), Positives = 85/198 (42%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVHNVRYDEE 215
GS + L+LW+++ ++ G P D V CS DG + + +V+ E
Sbjct: 721 GSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPD-DQVLASCSADGTLKLWDVKSANE 779
Query: 216 LVT------FTHS------MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
+ F +S + V ++S+DG ++ A+ + ++++ L + +
Sbjct: 780 RKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMV--AAKNKVFLFDIHSSGLLAEM 837
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
H +A+ F + + + A + +++W + D ++ R GH + C+ F
Sbjct: 838 HMGHHSAVQYCDFSPHNHLAVVALSQYCVELW---SMDSGLKVADCR-GHLSWVHCVMFS 893
Query: 324 ANGRHILSAGQDRAFRLF 341
+G L++ D+ RL+
Sbjct: 894 PDGSSFLTSSDDQTIRLW 911
Score = 82 (33.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
LA +D I++ +++ R+ + GH + F+ DGK L+SS D +++IW+
Sbjct: 978 LAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWN 1033
Score = 77 (32.2 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 39/178 (21%), Positives = 72/178 (40%)
Query: 442 GTAGGW-IERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACD-STNTLMISAGYHGDIK 499
GT W ++ N + I+ + SE + EV+ C S + I +
Sbjct: 767 GTLKLWDVKSANERKSINVKQFFLNSEEPQ--EDLEVIVKCCSWSADGAKIMVAAKNKVF 824
Query: 500 VWDFKGRDLKSRWEVGC-SLVKIVYHRVNGLLATVA-DDLVIRLFDVVALRMVRKFEGHT 557
++D L + +G S V+ + LA VA + L+ + + V GH
Sbjct: 825 LFDIHSSGLLAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHL 884
Query: 558 DRITDFCFSEDGKWLLSSGMDGSLRIWDV---------ILARQIDAIHVDVSITALSL 606
+ FS DG L+S D ++R+W+ +L ++ID + + +T L++
Sbjct: 885 SWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEVTVLAV 942
Score = 58 (25.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 41/208 (19%), Positives = 90/208 (43%)
Query: 425 TAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDS 484
+AV+ C S + AV+ + +E +++ SG+ D ++ H V + D
Sbjct: 843 SAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLK---VADCRGHLSWVH---CVMFSPDG 896
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 544
++ L S I++W+ K + K+ V + +V+ N + D+ IR
Sbjct: 897 SSFLTSSDDQ--TIRLWETK-KVCKNSATVLKQEIDVVFQE-NEVTVLAVDN--IR---- 946
Query: 545 VALRMVRKFEGHTDRITDF-----CFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD- 598
L+++ G D +T+ C S ++L G DG+++I +++ R + +
Sbjct: 947 -RLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHK 1005
Query: 599 VSITALSLSPNMDVLATAHVDQNGVYLW 626
++ + + + L ++ D + V +W
Sbjct: 1006 TTVRHIQFTADGKTLISSS-DDSAVQIW 1032
>ASPGD|ASPL0000015866 [details] [associations]
symbol:AN8183 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0030529 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003
ProteinModelPortal:C8V743 EnsemblFungi:CADANIAT00004225
Uniprot:C8V743
Length = 851
Score = 174 (66.3 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 80/330 (24%), Positives = 140/330 (42%)
Query: 306 LLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ--QSRELSQRHVAKRARX 363
L R +GH I + ++ R +L+A +D R++S+ + + LS RA
Sbjct: 143 LHRDLAGHFDEVQHIEWSSDSRFLLTASKDLTARVWSLDPEDGFEPTTLSGHRQGVRAAF 202
Query: 364 XXXXXXXXXXXPVIAFDCAEIRERDWCNVVTCHMDTAQAYV---WRLQNFVLGEHILRPC 420
++ DCA R W V DT + WR+ V + +P
Sbjct: 203 FSADQESIYT---VSRDCALFR---WEYVSKKDPDTMEDVAEPRWRI---VKKDFFQQP- 252
Query: 421 PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGV 480
+ T VK A N V+G + G + L + L +S+ SN +VV +
Sbjct: 253 --HAT-VKCAAFHAASNLLVVGFSNGLFGLYELPE-FNTIHLLSISQ-SNI----DVVSI 303
Query: 481 ACDSTNTLMISAGYHGDIKVWDFKGRD--LKSRWEVGCSLVKIVYHRVNGLLATVADDLV 538
+ L + G + VW+++ LK + + S+ + Y + T ADD
Sbjct: 304 N-KTGEWLAFGSSKFGQLLVWEWQSESYILKQQGHLD-SMNALAYSPDGQRIVTAADDGK 361
Query: 539 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD 598
I+++DV + + F HT +T FS+ G L +S +DGS+R WD+I R
Sbjct: 362 IKVWDVKSGFCLVTFTEHTSGVTACQFSKKGNVLFTSSLDGSVRAWDLIRYRNFRTFTAP 421
Query: 599 --VSITALSLSPNMDVLATAHVDQNGVYLW 626
+S ++L++ P+ +V+ D +++W
Sbjct: 422 SRLSFSSLAVDPSGEVICAGSPDSFDIHVW 451
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 50/175 (28%), Positives = 74/175 (42%)
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
S+ G L +W ++ + + +G P + DGKI V +V+ LV
Sbjct: 315 SKFGQLLVWEWQSESYILKQQGHLDSMNALAYSPDGQRIVTAADDGKIKVWDVKSGFCLV 374
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
TFT G VTA FS G L S G + W+L + R + SL
Sbjct: 375 TFTEHTSG-VTACQFSKKGNVLFTSSLD-GSVRAWDLIRYRNFRTFTAPSRLSFSSLAVD 432
Query: 278 ANEPVLMSASADN-SIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILS 331
+ V+ + S D+ I +W T G +LL SGH P + F A+G H+L+
Sbjct: 433 PSGEVICAGSPDSFDIHVWSVQT--G--QLLDQLSGHEGPVSALAFAADGNHLLT 483
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 174 (66.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 487 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 543
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ + + +++F GH+ + + F++DG +++S+ DG++++W+V
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNV 378
Score = 151 (58.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 53/196 (27%), Positives = 84/196 (42%)
Query: 119 AFKGIEENLAPVG---HVKLDDKFTPTCI-MHPD-TYLNKVIVGSQEGSLQLWNISTKKK 173
A K +EE P H+K K C PD YL + GS +G +++WN +T K
Sbjct: 192 AVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYL---VTGSVDGFIEVWNFTTGKI 248
Query: 174 LYEFKGWGXXXXXXXXXPAL--------DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
+ K L +++A G DGKI V ++ + L F +
Sbjct: 249 RKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSK 308
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
VT L+FS D +L S + I I L+ + R H + + F + ++S
Sbjct: 309 GVTCLSFSKDSSQIL-SASFDQTIRIHGLKSGKTLKEFR-GHSSFVNEATFTQDGHYIIS 366
Query: 286 ASADNSIKMWIFDTTD 301
AS+D ++K+W TT+
Sbjct: 367 ASSDGTVKVWNVKTTE 382
Score = 130 (50.8 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 37/121 (30%), Positives = 59/121 (48%)
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
M AV + FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQ 321
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +I+ I G L FR GHS+ F +G +I+SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKT-LKEFR-GHSSFVNEATFTQDGHYIISASSDGTVKVWN 377
Query: 343 V 343
V
Sbjct: 378 V 378
Score = 129 (50.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 279
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 339
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 340 LFSVIQDQQSRE 351
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 68 (29.0 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 37/151 (24%), Positives = 67/151 (44%)
Query: 489 MISAGYHGDIKVWDFKGRDLKSRWE-VGCSL-VKIVYHRVNGLLATVADDLVI--RLFDV 544
+ISA G +KVW+ K + + ++ +G + I + V LL + V+ R V
Sbjct: 364 IISASSDGTVKVWNVKTTECSNTFKSLGSTAGTDITVNSVI-LLPKNPEHFVVCNRSNTV 422
Query: 545 VALRM----VRKFEGHTDRITDF--C-FSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV 597
V + M VR F DF C S G+W+ G D L + + + + V
Sbjct: 423 VIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTV 482
Query: 598 -DVSITALSLSPNMDVLATAHVDQNGVY-LW 626
+ + ++ P+ +++AT ++G+ LW
Sbjct: 483 HEKDVIGIAHHPHQNLIAT--YSEDGLLKLW 511
Score = 51 (23.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 24/105 (22%), Positives = 40/105 (38%)
Query: 480 VACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVI 539
V C+ +NT++I G I V F + V C+L R + V +D V+
Sbjct: 414 VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGEDFVL 466
Query: 540 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
F V ++ R H + + + DG L++W
Sbjct: 467 YCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 48 (22.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
ER+ H +V+G+A L+ + G +K+W
Sbjct: 477 ERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 688 KQQIPDLVTLSLLPKSQWQSLINLDII 714
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 157 (60.3 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 52/193 (26%), Positives = 85/193 (44%)
Query: 150 YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHN 209
Y +KV GS + + +LW+ T K Y F+G P +VA G D + +
Sbjct: 146 YGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 210 VRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDN 269
V EE+ T + +L F++ G L+ +G+ +W++ R V+ H
Sbjct: 206 VESGEEVSTLAGHF-AEIISLCFNTTGDRLV-TGSFDHTAILWDVPSGRKVHVL-SGHRG 262
Query: 270 AIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHI 329
I + F + ++ +AS D S K+W D G + L GH+ L + F G+ I
Sbjct: 263 EISCVQFNWDCSLIATASLDKSCKVW--DAEGG--QCLATLLGHNDEVLDVCFNYTGQLI 318
Query: 330 LSAGQDRAFRLFS 342
+A D R+FS
Sbjct: 319 ATASADGTSRVFS 331
Score = 131 (51.2 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 55/238 (23%), Positives = 103/238 (43%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
V T MDT A +W +++ GE + + C + G+ V G+ +
Sbjct: 192 VATGSMDTT-AKLWDVES---GEEVSTLAGHFAEIISLC-FNTTGDRLVTGSFDHTAILW 246
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD-LKS 510
++ SG R ++ +S H GE+ V + +L+ +A KVWD +G L +
Sbjct: 247 DVPSG--RKVHV-LS-----GHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLAT 298
Query: 511 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
++ + ++ L+AT + D R+F + + + EGH I+ CF+ G
Sbjct: 299 LLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGS 358
Query: 571 WLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+L++ +D + R+W V + + H D I + + + D + T D N +W
Sbjct: 359 RVLTASVDKTSRVWCVKTGACLQVLEGHSD-EIFSCAFNYEGDTIITGSKD-NTCRIW 414
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 45/189 (23%), Positives = 84/189 (44%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
I GS + + ++W+ ++ ++L+ +G P D VA G D + +
Sbjct: 108 ITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETG 167
Query: 214 EELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ TF H+ + LAF+ L+A+G+ +W++E S + H II
Sbjct: 168 KCFYTFRGHTAE--IVCLAFNPQST-LVATGSMDTTAKLWDVESGEEVSTLA-GHFAEII 223
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
SL F L++ S D++ +W D G R + SGH C++F + I +A
Sbjct: 224 SLCFNTTGDRLVTGSFDHTAILW--DVPSG--RKVHVLSGHRGEISCVQFNWDCSLIATA 279
Query: 333 GQDRAFRLF 341
D++ +++
Sbjct: 280 SLDKSCKVW 288
Score = 85 (35.0 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 32/137 (23%), Positives = 60/137 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAHDNAIISLHFFANEPV--- 282
+T +AF+ G + +G+ IW+ L ++ E H N + ++ F N P
Sbjct: 95 LTNVAFNKSGSCFI-TGSYDRTCKIWDTASGEELHTL--EGHRNVVYAIAF--NNPYGDK 149
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+ + S D + K+W +T FR GH+A +C+ F + + D +L+
Sbjct: 150 VATGSFDKTCKLWSAET---GKCFYTFR-GHTAEIVCLAFNPQSTLVATGSMDTTAKLWD 205
Query: 343 VIQDQQSRELSQRHVAK 359
V ++ L+ H A+
Sbjct: 206 VESGEEVSTLAG-HFAE 221
Score = 51 (23.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 19/79 (24%), Positives = 34/79 (43%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY- 323
+AH + ++ F + ++ S D + K+W DT G+ L GH I F
Sbjct: 89 QAHILPLTNVAFNKSGSCFITGSYDRTCKIW--DTASGEE--LHTLEGHRNVVYAIAFNN 144
Query: 324 ANGRHILSAGQDRAFRLFS 342
G + + D+ +L+S
Sbjct: 145 PYGDKVATGSFDKTCKLWS 163
Score = 42 (19.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 21/92 (22%), Positives = 38/92 (41%)
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTD--G--DPR---LLRFRSGHSAPPLCIRFYANG 326
L A EP++ S+ + +K+ I + G D R L R H P + F +G
Sbjct: 46 LEIRAAEPLITSSCVEQ-VKLLICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSG 104
Query: 327 RHILSAGQDRAFRLFSVIQDQQSRELS-QRHV 357
++ DR +++ ++ L R+V
Sbjct: 105 SCFITGSYDRTCKIWDTASGEELHTLEGHRNV 136
>UNIPROTKB|Q229Z6 [details] [associations]
symbol:TTHERM_01308010 "POC1 centriolar protein homolog"
species:312017 "Tetrahymena thermophila SB210" [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GO:GO:0030030 KO:K16482 EMBL:GG662475 RefSeq:XP_001029778.1
UniGene:Tth.7377 ProteinModelPortal:Q229Z6 EnsemblProtists:EAR82115
GeneID:7835570 KEGG:tet:TTHERM_01308010 ProtClustDB:CLSZ2449456
Uniprot:Q229Z6
Length = 634
Score = 115 (45.5 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 26/108 (24%), Positives = 54/108 (50%)
Query: 520 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
++++H L + + D I++ D+ + ++++ + H ++ G +L S+G D
Sbjct: 235 QVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDS 294
Query: 580 SLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
++IWD+ RQI ++ D IT + + + D AT QN +W
Sbjct: 295 KIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYFATGG-SQNLCMVW 341
Score = 114 (45.2 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD 235
F+G P + VA CS D ++V N + + F +GAV + +S D
Sbjct: 43 FRGHEDIITCADFDPKMRQVA-SCSKDSIVYVWNFKPQQRPFKFV-GHKGAVYCVKYSPD 100
Query: 236 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
G+ + + G I +W + S+I+ AH AI S+ F A+ L+S+S D ++K+W
Sbjct: 101 GETIASCGQDRQ-IRLWQNTVQSKCSIIK-AHCGAIRSMSFSADGGYLLSSSDDKTLKLW 158
Score = 110 (43.8 bits), Expect = 0.00035, Sum P(3) = 0.00035
Identities = 46/227 (20%), Positives = 98/227 (43%)
Query: 148 DTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHV 207
D + +V S++ + +WN +++ ++F G P + +A D +I +
Sbjct: 56 DPKMRQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQDRQIRL 115
Query: 208 -HNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREA 266
N + + H GA+ +++FS+DG LL+S + + +W L+ ++
Sbjct: 116 WQNTVQSKCSIIKAHC--GAIRSMSFSADGGYLLSS-SDDKTLKLWRLQDKKFMCSFA-G 171
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWI---------FDTTDGDPRLLRFRS--GHSA 315
H N + S + ++ S S D ++ +W + T D + ++ + S H
Sbjct: 172 HKNWVRSGVISPDMRLVASGSDDKTVMLWDLNFQKIVSKYSTLDDNVKISQINSYSDHMD 231
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRAR 362
+ F+ +G ++S+ D + I D +S +L Q + A A+
Sbjct: 232 TVSQVLFHPDGTCLISSSFDHKIK----ITDIRSNKLIQHYNAHDAQ 274
Score = 104 (41.7 bits), Expect = 5.7e-08, Sum P(3) = 5.7e-08
Identities = 29/112 (25%), Positives = 52/112 (46%)
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DV 599
L D V + + + H D ++ F DG L+SS D ++I D+ + I + D
Sbjct: 214 LDDNVKISQINSYSDHMDTVSQVLFHPDGTCLISSSFDHKIKITDIRSNKLIQHYNAHDA 273
Query: 600 SITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVK 651
+ ++S+ P LA+A D + +W R G Y++ K+I +V+
Sbjct: 274 QVNSISIHPTGYFLASAGSDSK-IKIWDLR---QGRQIYTLYSNDKDITTVQ 321
Score = 88 (36.0 bits), Expect = 1.8e-06, Sum P(3) = 1.8e-06
Identities = 30/153 (19%), Positives = 65/153 (42%)
Query: 198 VGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL--E 255
+G + KI +D L +T F + + AS + ++ +WN +
Sbjct: 21 LGNTSSKITEQQTTHDPALSRSFRGHEDIITCADFDPKMRQV-ASCSKDSIVYVWNFKPQ 79
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
+R + V H A+ + + + + S D I++W +T +++ H
Sbjct: 80 QRPFKFV---GHKGAVYCVKYSPDGETIASCGQDRQIRLWQ-NTVQSKCSIIK---AHCG 132
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+ F A+G ++LS+ D+ +L+ +QD++
Sbjct: 133 AIRSMSFSADGGYLLSSSDDKTLKLWR-LQDKK 164
Score = 87 (35.7 bits), Expect = 2.2e-06, Sum P(3) = 2.2e-06
Identities = 33/125 (26%), Positives = 52/125 (41%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
A +A+A Q L + SS + L R H++ I F + S
Sbjct: 7 ASSAVASQKQTQSKLGN-TSSKITEQQTTHDPALSRSFR-GHEDIITCADFDPKMRQVAS 64
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF-SVI 344
S D+ + +W F R +F GH C+++ +G I S GQDR RL+ + +
Sbjct: 65 CSKDSIVYVWNFKPQQ---RPFKF-VGHKGAVYCVKYSPDGETIASCGQDRQIRLWQNTV 120
Query: 345 QDQQS 349
Q + S
Sbjct: 121 QSKCS 125
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLL 530
AH+ +V ++ T + SAG IK+WD + GR + + + + + +++
Sbjct: 270 AHDAQVNSISIHPTGYFLASAGSDSKIKIWDLRQGRQIYTLYSNDKDITTVQFNQSGDYF 329
Query: 531 AT 532
AT
Sbjct: 330 AT 331
Score = 37 (18.1 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 692 PDLVTLSLLPKSQWQSLIN 710
P T+S++P Q Q N
Sbjct: 388 PSKKTISIIPPQQLQDTFN 406
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 151 (58.2 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 33/140 (23%), Positives = 67/140 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 66 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 125
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 126 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 185
Query: 592 IDAI--HVDVSITALSLSPN 609
+ H + + PN
Sbjct: 186 MSEFPGHTG-PVNVVEFHPN 204
Score = 138 (53.6 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 39 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 95
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 96 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 150
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 151 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 188
Score = 127 (49.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 41/170 (24%), Positives = 74/170 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 43 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 102
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 103 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 158
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN 325
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N
Sbjct: 159 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPN 204
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/131 (28%), Positives = 59/131 (45%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ GSQ GS+++W++ K L G P + VA G D I + ++R
Sbjct: 82 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRK 141
Query: 214 EELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ + HS AV L FS DG+ LAS A + +W+L ++ S H +
Sbjct: 142 GCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDLTAGKMMSEF-PGHTGPVN 197
Query: 273 SLHFFANEPVL 283
+ F NE +L
Sbjct: 198 VVEFHPNEYLL 208
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 143 (55.4 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 52/196 (26%), Positives = 89/196 (45%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPV-GH--VKLDDKFTPTCIMHPDTYLNKVIVGSQ 159
G+ +LS D + +W+ K + NL GH D +F+P H Y S
Sbjct: 430 GDFVLSSSADTTIRLWSTK-LNANLVCYKGHNYPVWDAQFSP--FGH---YFASC---SH 480
Query: 160 EGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF 219
+ + ++W++ + L G P + +A G SD + + +V+ E + F
Sbjct: 481 DRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIF 540
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFAN 279
R V +LA S DG+ +ASG G I +W+L R + + H++ + SL +
Sbjct: 541 I-GHRSMVLSLAMSPDGR-YMASGDEDGTIMMWDLSTARCITPLM-GHNSCVWSLSYSGE 597
Query: 280 EPVLMSASADNSIKMW 295
+L S SAD ++K+W
Sbjct: 598 GSLLASGSADCTVKLW 613
Score = 129 (50.5 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ +H +AT + D +RL+DV VR F GH + S DG+++ S DG+
Sbjct: 508 VQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGT 567
Query: 581 LRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLW 626
+ +WD+ AR I + S + +LS S +LA+ D V LW
Sbjct: 568 IMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCT-VKLW 613
Score = 122 (48.0 bits), Expect = 0.00093, P = 0.00093
Identities = 42/179 (23%), Positives = 78/179 (43%)
Query: 102 FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIM-HPDTYLNKVIVGSQE 160
FG + S D IW+ I+ GH+ D C+ HP+ N + GS +
Sbjct: 471 FGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD-----CVQWHPNC--NYIATGSSD 523
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFT 220
+++LW++ T + + F G P +A G DG I + ++ +T
Sbjct: 524 KTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS-TARCITPL 582
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK--RRLQSVIREAHDNAIISLHFF 277
V +L++S +G LLASG++ + +W++ + ++ + + N + SL F
Sbjct: 583 MGHNSCVWSLSYSGEGS-LLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTF 640
Score = 105 (42.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 33/123 (26%), Positives = 55/123 (44%)
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
HS G V + FS G +L+S A + I +W+ K V + H+ + F
Sbjct: 417 HS--GPVYSATFSPPGDFVLSSSADT-TIRLWST-KLNANLVCYKGHNYPVWDAQFSPFG 472
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
S S D + ++W D P LR +GH + C++++ N +I + D+ RL
Sbjct: 473 HYFASCSHDRTARIWSMDRIQ--P--LRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRL 528
Query: 341 FSV 343
+ V
Sbjct: 529 WDV 531
Score = 83 (34.3 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 23/84 (27%), Positives = 42/84 (50%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H + S F ++S+SAD +I++W +T + L+ ++ GH+ P +F G
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLW---STKLNANLVCYK-GHNYPVWDAQFSPFG 472
Query: 327 RHILSAGQDRAFRLFSVIQDQQSR 350
+ S DR R++S+ + Q R
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLR 496
Score = 79 (32.9 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/91 (24%), Positives = 45/91 (49%)
Query: 498 IKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEG 555
+++WD + + R +G S+V + +G +A+ +D I ++D+ R + G
Sbjct: 526 VRLWDVQTGECV-RIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMG 584
Query: 556 HTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
H + +S +G L S D ++++WDV
Sbjct: 585 HNSCVWSLSYSGEGSLLASGSADCTVKLWDV 615
Score = 66 (28.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 22/92 (23%), Positives = 39/92 (42%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V+ +A M S G I +WD R + + + Y LLA
Sbjct: 543 HRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLA 602
Query: 532 TVADDLVIRLFDVVALRMVRKFE---GHTDRI 560
+ + D ++L+DV + + K E G+++R+
Sbjct: 603 SGSADCTVKLWDVTSSTKLTKAEEKNGNSNRL 634
Score = 54 (24.1 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
TF ++ G + + S DG L+A G S I +W++ K
Sbjct: 347 TFVNTHNG-LNCSSISHDGS-LVAGGFSDSSIKVWDMAK 383
Score = 53 (23.7 bits), Expect = 4.5e-06, Sum P(3) = 4.5e-06
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 312 GHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
GHS P F G +LS+ D RL+S
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWS 446
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 164 (62.8 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 68/263 (25%), Positives = 129/263 (49%)
Query: 103 GEHILSIDIDGNMFIW-AFKG-IEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
GE + S D + IW A+ G E+ ++ GH KL D+ N ++ S +
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTIS--GH-KLG---ISDVAWSSDS--NLLVSASDD 108
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTF- 219
+L++W++S+ K L KG P +++ G D + + +V+ + L T
Sbjct: 109 KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 168
Query: 220 THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIIS-LHFF 277
HS V+A+ F+ DG L+ S + G+ IW+ + L+++I + DN +S + F
Sbjct: 169 AHS--DPVSAVHFNRDGS-LIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFS 223
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GRHILSA 332
N +++A+ DN++K+W D + G + L+ + H CI +AN G+ I+S
Sbjct: 224 PNGKYILAATLDNTLKLW--DYSKG--KCLKTYTCHKNEKYCI--FANFSVTGGKWIVSG 277
Query: 333 GQDRAFRLFSVIQDQQSRELSQR 355
+D ++++ Q++E+ Q+
Sbjct: 278 SEDNLVYIWNL----QTKEVVQK 296
Score = 155 (59.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 46/186 (24%), Positives = 88/186 (47%)
Query: 445 GGWIERFNLQSGISR-GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF 503
G W+ + I G+Y E++ H + VA S + L++SA +K+WD
Sbjct: 57 GEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 116
Query: 504 K-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITD 562
G+ LK+ + ++ + L+ + + D +R++DV + ++ H+D ++
Sbjct: 117 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 176
Query: 563 FCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQ 620
F+ DG ++SS DG RIWD + + + D + ++ + SPN + A +D
Sbjct: 177 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD- 235
Query: 621 NGVYLW 626
N + LW
Sbjct: 236 NTLKLW 241
Score = 134 (52.2 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 43/168 (25%), Positives = 83/168 (49%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V + +L++S+ Y G ++WD G+ LK+ + V V NG
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+LA D+ ++L+D + ++ + H ++ F FS GKW++S D + IW+
Sbjct: 229 ILAATLDN-TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNG-VYLWVNRC 630
+ + + H DV I+ + P +++A+A ++ + + LW + C
Sbjct: 288 LQTKEVVQKLQGHTDVVIST-ACHPTENIIASAALENDKTIKLWKSDC 334
Score = 106 (42.4 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 25/115 (21%), Positives = 60/115 (52%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 531
H+ V + + L++S + +++WD K G+ LK+ + + ++R L+
Sbjct: 128 HSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV 187
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWD 585
+ + D + R++D + + ++ + F FS +GK++L++ +D +L++WD
Sbjct: 188 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
Score = 78 (32.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H A+ S+ F N L S+SAD IK+W DG + + SGH + + ++
Sbjct: 44 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKLGISDVAWSSDS 99
Query: 327 RHILSAGQDRAFRLFSV 343
++SA D+ +++ V
Sbjct: 100 NLLVSASDDKTLKIWDV 116
Score = 49 (22.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 307 LRFR-SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
L+F +GH+ ++F NG + S+ D+ +++ + + +S
Sbjct: 37 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 128 (50.1 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 46/204 (22%), Positives = 86/204 (42%)
Query: 432 ISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMIS 491
+S+ GN+A+ +G W + L ++ G + R H +V+ VA + N ++S
Sbjct: 72 LSSDGNYAL---SGSWDQTLRLWD-LAAGK----TTRRFEGHTKDVLSVAFSADNRQIVS 123
Query: 492 AGYHGDIKVWDFKGRDLKSRWEVG----CSLVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
IK+W+ + E G S V+ + N ++ + D ++++++
Sbjct: 124 GSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANC 183
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI-HVDVSITALSL 606
++ GH + S DG S G D +WD+ + + + H D+ I AL
Sbjct: 184 KLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLEHNDI-INALCF 242
Query: 607 SPNMDVLATAHVDQNGVYLWVNRC 630
SPN L A+ + +W C
Sbjct: 243 SPNRYWLCVAYGPS--IKIWDLAC 264
Score = 113 (44.8 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 32/119 (26%), Positives = 59/119 (49%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
++ + SSDG L SG+ + +W+L + E H ++S+ F A+ ++S
Sbjct: 67 ISDVVLSSDGNYAL-SGSWDQTLRLWDLAAGKTTRRF-EGHTKDVLSVAFSADNRQIVSG 124
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH--ILSAGQDRAFRLFSV 343
S D +IK+W T + + GH+ C+RF N + I+S G DR +++++
Sbjct: 125 SRDKTIKLW---NTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNL 180
Score = 99 (39.9 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD-DLVIRLFD 543
+N +++S G+ +KVW+ LK+ + V +G L T D L+D
Sbjct: 162 SNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWD 221
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV-SIT 602
+ + + E H D I CFS + WL + S++IWD+ + ++ + +V S T
Sbjct: 222 LNDGKNLYTLE-HNDIINALCFSPNRYWLCVA-YGPSIKIWDLACKKTVEELRPEVVSPT 279
Query: 603 ALSLSPNMDVLA 614
+ + P LA
Sbjct: 280 SKADQPQCLSLA 291
Score = 79 (32.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 27/127 (21%), Positives = 54/127 (42%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-----LQSVIREAHDNAIISLHFFAN 279
G VT +A + + S + + +W L + H + I + ++
Sbjct: 16 GWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSD 75
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 339
+S S D ++++W D G RF GH+ L + F A+ R I+S +D+ +
Sbjct: 76 GNYALSGSWDQTLRLW--DLAAGKTTR-RFE-GHTKDVLSVAFSADNRQIVSGSRDKTIK 131
Query: 340 LFSVIQD 346
L++ + +
Sbjct: 132 LWNTLAE 138
Score = 66 (28.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/130 (20%), Positives = 53/130 (40%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHR 525
+ +++ HNG + V +L S G +WD G++L + E ++ +
Sbjct: 186 KNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTL-EHN-DIINALCFS 243
Query: 526 VNGLLATVADDLVIRLFDVVALRMVRKFE-------GHTDR--ITDFCFSEDGKWLLSSG 576
N VA I+++D+ + V + D+ +S DG+ L +
Sbjct: 244 PNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGY 303
Query: 577 MDGSLRIWDV 586
D ++R+W V
Sbjct: 304 SDNTIRVWQV 313
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 119 (46.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 59/236 (25%), Positives = 99/236 (41%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGD--IKVWDFKGRDLKSRWEVGCSLVKIVYH 524
ER H +V V +++S IK+WD K + S V +
Sbjct: 264 ERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKW 323
Query: 525 RVNG-LLATVADDLVIRLFDVVALRM-VRKFEGHTDRITDFCFSEDGKWLL-SSGMDGSL 581
NG L T + D +++LFD+ LR V+ F GH + + + L S G DGS+
Sbjct: 324 NDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFCSGGSDGSI 383
Query: 582 RIWDVILARQIDAIHV--DVSITALSLSPNMDVLATAHVDQNGVYLWV-NRCMFSGDSNI 638
W+V ++I + D + L+ P +L + D + W NR GD
Sbjct: 384 LFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHT-IKFWTRNR---PGDLMR 439
Query: 639 DSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDL 694
D Y ++ S+++++ C+ +++ P + DRV + + L K IP L
Sbjct: 440 DKYN-----LNTLPASLAALDECEYDDAIIPGMGPEDRV-EFTESLTADKGFIPGL 489
Score = 104 (41.7 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 31/141 (21%), Positives = 64/141 (45%)
Query: 196 VAVGCSDGKIHVHN-VRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
+ G S G+ + N + ++ E + H + +V + +S + + +G G + W
Sbjct: 161 LVTGASSGEFTLWNGLTFNFETILQAHDI--SVRTMVWSHNDS-WMVTGDHGGYVKYWQS 217
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
++ + +AH AI + F + +S S D ++++W F + R+LR GH
Sbjct: 218 NMNNVK--MYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQ-EERVLR---GHG 271
Query: 315 APPLCIRFYANGRHILSAGQD 335
A C+ ++ I+S +D
Sbjct: 272 ADVKCVHWHPQKGMIVSGSKD 292
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 186 (70.5 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 64/268 (23%), Positives = 118/268 (44%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLLFGEH----ILSIDIDGNMFIWAFKGIEENLAPVGHVK 134
+ KR +++ + HS VN L + G+ +L+ D + +W+ ++ GH
Sbjct: 1 MAKRGYKLQEFVAHSGNVNCLSI-GKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTS 59
Query: 135 LDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALD 194
D + + L V+ G+ G ++LW++ K + F G P +
Sbjct: 60 PVDSVA----FNSEEVL--VLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGE 113
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
+A G SD + V + R + T+ RG ++ + FS DG+ + SG V+ +W+L
Sbjct: 114 FLASGSSDTNLRVWDTRKKGCIQTYKGHTRG-ISTIEFSPDGR-WVVSGGLDNVVKVWDL 171
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+L + H+ I SL F E +L + SAD ++K W +T + L+ +
Sbjct: 172 TAGKLLHEFK-CHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFE----LIGTTRPEA 226
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFS 342
I F+ +G+ L G D +++S
Sbjct: 227 TGVRAIAFHPDGQ-TLFCGLDDGLKVYS 253
Score = 175 (66.7 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 45/165 (27%), Positives = 79/165 (47%)
Query: 466 SERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRW---EVGCSLVKIV 522
S S H V VA +S L+++ G IK+WD + + + CS V+
Sbjct: 50 SPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVE-- 107
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLR 582
+H LA+ + D +R++D ++ ++GHT I+ FS DG+W++S G+D ++
Sbjct: 108 FHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVK 167
Query: 583 IWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
+WD+ + + + I +L P +LAT D+ V W
Sbjct: 168 VWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRT-VKFW 211
Score = 37 (18.1 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 638 IDSYASGKEIVSVKMPSVSSVEGCQDENSSQPDVHRTDRVPKDSFGLPTFKQQIPDLV 695
I S S IV V + + +E CQ ++ + R V GL T K Q +LV
Sbjct: 960 IRSTVSAPRIVGVDLHANERLEICQICSAGLHKIQRILPVLARRGGLITRKAQELNLV 1017
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 176 (67.0 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 54/238 (22%), Positives = 109/238 (45%)
Query: 105 HILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQ 164
+++S DG + +W+ +E+ P+G ++ + HP+ + + + + +
Sbjct: 268 NVVSCSYDGTVLLWSLS--QES--PIGELEQHPQRVSKVAFHPNGH--HLATACFDSTWR 321
Query: 165 LWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMR 224
+++++TKK+L +G P V G D V ++R + F
Sbjct: 322 MYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGR-CIMFLDGHT 380
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLM 284
+ ++ + +G ++ +G+S + +W+L RR + AH + + + A L+
Sbjct: 381 KEIHSVEWMPNGYEMI-TGSSDNSMKVWDLRMRR-NTYTMPAHTSVVTRVRADAAGQYLV 438
Query: 285 SASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
SAS D ++KMW TT P LR GH LC+ +G+ + S+ DR F+L++
Sbjct: 439 SASFDCTLKMW--STTGWQP--LRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLWA 492
Score = 161 (61.7 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 58/258 (22%), Positives = 112/258 (43%)
Query: 104 EHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDD--KFTPTCIMHPDTYLNKVIVGSQEG 161
EHI++ G++ +W + + + +GH +F P D V+ S +G
Sbjct: 217 EHIVTAGWSGSVAVWKREQCAQEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDG 276
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTH 221
++ LW++S + + E + P +A C D ++++ +EL+ +
Sbjct: 277 TVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHHLATACFDSTWRMYDLTTKKELL-YQE 335
Query: 222 SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP 281
+V +AF DG L G +W++ R + + H I S+ + N
Sbjct: 336 GHSKSVADVAFHPDGSVALTGGHDC-YGRVWDMRTGRCIMFL-DGHTKEIHSVEWMPNGY 393
Query: 282 VLMSASADNSIKMWIFDTTDGDPRLLR---FRSGHSAPPLCIRFYANGRHILSAGQDRAF 338
+++ S+DNS+K+W D R+ R H++ +R A G++++SA D
Sbjct: 394 EMITGSSDNSMKVW-------DLRMRRNTYTMPAHTSVVTRVRADAAGQYLVSASFDCTL 446
Query: 339 RLFSVIQDQQSRELSQRH 356
+++S Q R+L Q H
Sbjct: 447 KMWSTTGWQPLRQL-QGH 463
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 55/231 (23%), Positives = 88/231 (38%)
Query: 401 QAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRG 460
+A+ W +Q L H + P A C SA V G + + +
Sbjct: 186 EAHKW-VQQINL--HASQVADTRPVAF--CEFSADSEHIVTAGWSGSVAVWKREQCAQEI 240
Query: 461 SYLDMSERSNYA--HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSL 518
++ S ++ A H G S N ++S Y G + +W E
Sbjct: 241 KFIGHSSQAGCARFHPGAFTQNDYSSLN--VVSCSYDGTVLLWSLSQESPIGELEQHPQR 298
Query: 519 V-KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
V K+ +H LAT D R++D+ + + EGH+ + D F DG L+ G
Sbjct: 299 VSKVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGH 358
Query: 578 DGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
D R+WD+ R I + H I ++ PN + T D N + +W
Sbjct: 359 DCYGRVWDMRTGRCIMFLDGHTK-EIHSVEWMPNGYEMITGSSD-NSMKVW 407
Score = 38 (18.4 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 70 FAAYGNHIAVVKRAHQVATWSR 91
F+A HI + VA W R
Sbjct: 212 FSADSEHIVTAGWSGSVAVWKR 233
>ASPGD|ASPL0000054735 [details] [associations]
symbol:AN0292 species:162425 "Emericella nidulans"
[GO:0000124 "SAGA complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 HOGENOM:HOG000212424 ProteinModelPortal:C8VUA4
EnsemblFungi:CADANIAT00002423 OMA:GGIWSLS Uniprot:C8VUA4
Length = 606
Score = 124 (48.7 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 34/108 (31%), Positives = 52/108 (48%)
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ +H + + T + D +R++ V VR F GHT IT S DGK L S+ GS
Sbjct: 409 VCFHPNSAYVFTGSSDRTVRMWAVTTGNAVRMFTGHTGNITALACSRDGKTLASADDHGS 468
Query: 581 LRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ +WD+ R + + H I +LS S +VL + D V +W
Sbjct: 469 ILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGT-VRVW 515
Score = 103 (41.3 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 31/127 (24%), Positives = 58/127 (45%)
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
V F S + A+A ++ + LL+S A I +W+L+ + V+ + HD + L +
Sbjct: 313 VAFAPSATPSENAVA-PTNARWLLSSSADR-TIRLWSLDLWQCM-VVYKGHDQPVWDLQW 369
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D + ++W+ D R R GH C+ F+ N ++ + DR
Sbjct: 370 GPFGHYFVSGGHDKTARLWVTDHI----RQQRIFVGHEQDVDCVCFHPNSAYVFTGSSDR 425
Query: 337 AFRLFSV 343
R+++V
Sbjct: 426 TVRMWAV 432
Score = 86 (35.3 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
LA+ D I L+D+ R++++ GH I +S + L+S G DG++R+WDV+
Sbjct: 460 LASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVLVSGGADGTVRVWDVM 518
Score = 77 (32.2 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS-RWEVGCSLVKIVYHRVNGLL 530
H G + +AC + SA HG I +WD GR LK R + + + + +L
Sbjct: 444 HTGNITALACSRDGKTLASADDHGSILLWDLGPGRLLKRMRGHGKGGIWSLSWSVESNVL 503
Query: 531 ATVADDLVIRLFDVV 545
+ D +R++DV+
Sbjct: 504 VSGGADGTVRVWDVM 518
Score = 75 (31.5 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 19/68 (27%), Positives = 34/68 (50%)
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
L+S+SAD +I++W D + + GH P +++ G + +S G D+ RL+
Sbjct: 334 LLSSSADRTIRLWSLDLW----QCMVVYKGHDQPVWDLQWGPFGHYFVSGGHDKTARLWV 389
Query: 343 VIQDQQSR 350
+Q R
Sbjct: 390 TDHIRQQR 397
Score = 63 (27.2 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+ TF H+ + L FS D L+A+G I +W+L+ +++ S
Sbjct: 246 MFTF-HNTYDGINCLDFSDDNL-LVAAGMQESYIRVWSLDGKKIPS 289
Score = 57 (25.1 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 24/88 (27%), Positives = 38/88 (43%)
Query: 277 FANEPVLMSASADNS-IKMWIFD--------TTDGDPRLLRFRSGHSAPPLCIRFY---- 323
F+++ +L++A S I++W D + D P R GHS P + F
Sbjct: 261 FSDDNLLVAAGMQESYIRVWSLDGKKIPSDDSADEPPTNSRRLIGHSGPVYAVAFAPSAT 320
Query: 324 --------ANGRHILSAGQDRAFRLFSV 343
N R +LS+ DR RL+S+
Sbjct: 321 PSENAVAPTNARWLLSSSADRTIRLWSL 348
Score = 48 (22.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 479 GVAC-D-STNTLMISAGYHGD-IKVWDFKGRDLKS 510
G+ C D S + L+++AG I+VW G+ + S
Sbjct: 255 GINCLDFSDDNLLVAAGMQESYIRVWSLDGKKIPS 289
Score = 44 (20.5 bits), Expect = 6.6e-07, Sum P(3) = 6.6e-07
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKK 172
C+ D L V G QE +++W++ KK
Sbjct: 258 CLDFSDDNL-LVAAGMQESYIRVWSLDGKK 286
>UNIPROTKB|Q5R9T6 [details] [associations]
symbol:WDR55 "WD repeat-containing protein 55" species:9601
"Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS] [GO:0006364
"rRNA processing" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006364 CTD:54853 HOVERGEN:HBG054778
InterPro:IPR017422 PIRSF:PIRSF038169 EMBL:CR859296
RefSeq:NP_001125868.1 UniGene:Pab.10085 ProteinModelPortal:Q5R9T6
GeneID:100172799 KEGG:pon:100172799 InParanoid:Q5R9T6
Uniprot:Q5R9T6
Length = 383
Score = 115 (45.5 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 36/109 (33%), Positives = 55/109 (50%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDE----ELVTFTHSMRGAVTALAFSSDGQPLLASGASS 246
PA D++A G DG + V + E EL + H ++ A A+AFS DGQ L+
Sbjct: 48 PARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLK-ACRAVAFSEDGQKLVTVSKDK 106
Query: 247 GVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
I + ++E+ RL+ I +AH I SL +E VL + I++W
Sbjct: 107 A-IHVLDVEQGRLERRISKAHGAPINSL-LLVDENVLATGDDMGGIRLW 153
Score = 98 (39.6 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS-RWEVGCSLVKIVYHRVNGLLAT 532
+G++ V + G I ++++ G S R+ + + + LL T
Sbjct: 210 SGDLTSVTLMKCGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCMVPVTESLLCT 269
Query: 533 VADDLVIRLFDVVALRMVRKFEGHT-DRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ D VIR +++ R+V HT + + + S G++L SSG D L+ WD+ Q
Sbjct: 270 GSTDGVIRAVNILPNRVVGSVGQHTGEPVGELALSHCGRFLASSGHDQRLKFWDMA---Q 326
Query: 592 IDAIHVD 598
+ A+ VD
Sbjct: 327 LRAVVVD 333
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/86 (22%), Positives = 41/86 (47%)
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL-CIRFYANGRHILSA 332
L F +L + D + ++ + +G+ + L + SGH + F +G+ +++
Sbjct: 44 LAFHPARDLLAAGDVDGDVFVFSYSCQEGETKEL-WSSGHHLKACRAVAFSEDGQKLVTV 102
Query: 333 GQDRAFRLFSVIQDQQSRELSQRHVA 358
+D+A + V Q + R +S+ H A
Sbjct: 103 SKDKAIHVLDVEQGRLERRISKAHGA 128
Score = 59 (25.8 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 34/133 (25%), Positives = 59/133 (44%)
Query: 529 LLATVADDLV-IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
+LAT DD+ IRL+D + H + I D K LL++ DG L +++ I
Sbjct: 140 VLAT-GDDMGGIRLWDQRKEGPLMDMRQHEEYIADMALDPAKKLLLTASGDGCLGVFN-I 197
Query: 588 LARQIDAIHVDVS--ITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGK 645
R+ + + S +T+++L +A + +YL+ N F S D +A
Sbjct: 198 KRRRFELLSEPQSGDLTSVTLMKCGKKVACGS-SEGTIYLF-NWNGFGATS--DRFALRA 253
Query: 646 EIVSVKMPSVSSV 658
E + +P S+
Sbjct: 254 ESIDCMVPVTESL 266
>UNIPROTKB|F1SAY9 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 OMA:SIFAHDD EMBL:FP085476
EMBL:CU468902 Ensembl:ENSSSCT00000007369 Uniprot:F1SAY9
Length = 943
Score = 118 (46.6 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 37/136 (27%), Positives = 63/136 (46%)
Query: 165 LWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMR 224
+W++ +K+ +G P +AVG DG I + ++ E VTF + +
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTF-NGHK 107
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPVL 283
AVT+L + G L ASG+ I +W++ + R + H +AI F + +L
Sbjct: 108 AAVTSLKYDQLGGRL-ASGSKDTDIIVWDVINE--SGLYRLKGHKDAITQALFLREKNLL 164
Query: 284 MSASADNSIKMWIFDT 299
+S+ D +K W DT
Sbjct: 165 VSSGKDTMVKWWDLDT 180
Score = 105 (42.0 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 32/119 (26%), Positives = 53/119 (44%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRV 526
S Y H V+ + L+ + ++K+W DF G KS + S++ + +
Sbjct: 586 SLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDF-GDCHKSLFAHDDSVMYLKFVPK 644
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ L T D I+ +D V+ EGH I S G +++SS D SLR+W+
Sbjct: 645 SHLFFTAGKDRKIKQWDADKFEHVQTLEGHHQEIWCLAISPSGDYVVSSSHDKSLRLWE 703
Score = 90 (36.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 45/208 (21%), Positives = 92/208 (44%)
Query: 93 SAKVNLLL--LFGE--HILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S K N++ L GE +++ ++FIW + E+ L G L + T C PD
Sbjct: 21 SQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQG---LKHEVTCLC-PSPD 76
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
+ VG ++GS++++++ + + F G +A G D I V
Sbjct: 77 GL--HLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVW 134
Query: 209 NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAH 267
+V + L + A+T F + L++SG + ++ W+L+ + ++V+ H
Sbjct: 135 DVINESGLYRLK-GHKDAITQALFLREKNLLVSSGKDT-MVKWWDLDTQHCFKTVV--GH 190
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
+ L + E L++ ++D+ ++ W
Sbjct: 191 RTEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 87 (35.7 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 44/200 (22%), Positives = 82/200 (41%)
Query: 440 VLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIK 499
V+GT G ++ ++L SG + L+ + AH+G + ++ ++ G +K
Sbjct: 470 VIGTKTGKLQLYDLASG----NLLETVD----AHDGALWSLSLSPDQRGFVTGGADKSVK 521
Query: 500 VWDFK-GRDLKS---RWEVGCS--------LVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
WDF+ +D S R V + ++ + Y LLA D +++F V L
Sbjct: 522 FWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTL 581
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSL 606
+ GH + S DG + + D +++IW + ++ D S+ L
Sbjct: 582 KFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLKF 641
Query: 607 SPNMDVLATAHVDQNGVYLW 626
P + TA D+ + W
Sbjct: 642 VPKSHLFFTAGKDRK-IKQW 660
Score = 87 (35.7 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 34/141 (24%), Positives = 62/141 (43%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R V L+FSSD +L+ A S I IWN + LQ + + A+ S + V+
Sbjct: 415 RSDVRTLSFSSDNIAVLSGAAES--IKIWN--RSTLQCIRTMTCEYALCSFFVPGDRQVV 470
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL--F 341
+ K+ ++D G+ LL H + + R ++ G D++ + F
Sbjct: 471 IGTKTG---KLQLYDLASGN--LLETVDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 342 SVIQDQQSRELSQRHVAKRAR 362
+++D+ S + +R K+ R
Sbjct: 526 ELVKDENSTQ--KRLSVKQTR 544
Score = 86 (35.3 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 39/201 (19%), Positives = 82/201 (40%)
Query: 448 IERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-- 505
+E +++ + + S + H +V ++ S N ++S G IK+W+
Sbjct: 389 VELYSVYPSVPASQPVRTSRITIGGHRSDVRTLSFSSDNIAVLS-GAAESIKIWNRSTLQ 447
Query: 506 --RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 563
R + + + CS +V ++ T L +L+D+ + ++ + H +
Sbjct: 448 CIRTMTCEYAL-CSFFVPGDRQV--VIGTKTGKL--QLYDLASGNLLETVDAHDGALWSL 502
Query: 564 CFSEDGKWLLSSGMDGSLRIWDVILAR------------QIDAIHVDVSITALSLSPNMD 611
S D + ++ G D S++ WD L + Q + +D + +S SPN
Sbjct: 503 SLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQK 562
Query: 612 VLATAHVDQNGVYLWVNRCMF 632
+LA + +D +V+ F
Sbjct: 563 LLAVSLLDCTVKIFYVDTLKF 583
Score = 45 (20.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 39/215 (18%), Positives = 76/215 (35%)
Query: 10 IGYITSSVPFSVQRLGTENFVTVSVGKAFHIYNCAKLNLVLVGPQLPKKIRALASYRDYT 69
IG ++ F R +V V + I++ K +L+ L ++ L D
Sbjct: 19 IGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQGLKHEVTCLCPSPDGL 78
Query: 70 FAAYGNHIAVVKRAHQVA-----TWSRHSAKVNLLLL--FGEHILSIDIDGNMFIWAFKG 122
A G ++ ++ T++ H A V L G + S D ++ +W
Sbjct: 79 HLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAVTSLKYDQLGGRLASGSKDTDIIVWDVIN 138
Query: 123 IEENLAPV-GHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWG 181
E L + GH D T + N ++ ++ ++ W++ T+ G
Sbjct: 139 -ESGLYRLKGH---KDAITQALFLREK---NLLVSSGKDTMVKWWDLDTQHCFKTVVGHR 191
Query: 182 XXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
+ G SD ++ ++ Y EE+
Sbjct: 192 TEVWGLVLVSEEKRLITGASDSELRAWDIAYLEEI 226
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 163 (62.4 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 53/216 (24%), Positives = 95/216 (43%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
MH T ++ SQ+G L +W+ T K++ P+ + VA G D
Sbjct: 61 MHWATDSKLLVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNM 120
Query: 205 IHVHNVRYDEELVTFTHSMR---GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
++N++ E V + + G ++ F D + +SG ++ ++W++E + Q
Sbjct: 121 CSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNNIVTSSGDTT--CALWDIETGQ-QK 177
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
+ H +SL + + +S + D S K+W D +G R F +GH + I
Sbjct: 178 TVFVGHTGDCMSLAVSPDYKLFISGACDASAKLW--DVREGTCRQT-F-TGHESDINAIC 233
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
F+ NG I + D + RLF + DQ+ SQ +
Sbjct: 234 FFPNGEAICTGSDDASCRLFDLRADQELTAYSQESI 269
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 47/208 (22%), Positives = 90/208 (43%)
Query: 90 SRHSAKVNLL-LLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S H+ ++ L +I++ D +W + ++ VGH D + + PD
Sbjct: 140 SAHTGYLSCCRFLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHT--GDCMS--LAVSPD 195
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
L I G+ + S +LW++ F G P + + G D +
Sbjct: 196 YKL--FISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLF 253
Query: 209 NVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
++R D+EL ++ S+ +T++AFS G+ LL +G ++W+ K ++ H
Sbjct: 254 DLRADQELTAYSQESIICGITSVAFSLSGR-LLFAGYDDFNCNVWDSLKCERVGIL-SGH 311
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
DN + L A+ + + S D+ +K+W
Sbjct: 312 DNRVSCLGVTADGMAVATGSWDSFLKIW 339
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 130 (50.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 56/247 (22%), Positives = 101/247 (40%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPVGHVK----LDDKFTPTC-IMHPDTYLNKVIVG 157
G H S G + +W + E GH LD + P C D+ + G
Sbjct: 184 GNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLD--WYPLCQAWDADSEQLTLATG 241
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
+ + ++ LW S L +G P+ D + D + +V EL+
Sbjct: 242 AADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDVHTGVELL 301
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
G + ++A DG L++SG + + IW+L + V+ E H I+++ +
Sbjct: 302 MQEGHSEG-IFSIACQPDGS-LVSSGGNDAIGRIWDLRSGKSIMVLDE-HIRQIVAMAWS 358
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG--RHILSAGQD 335
N L ++SAD+++K+W L HS+ +R+ +G R I ++G D
Sbjct: 359 PNGYQLATSSADDTVKIWDLRKVS----LAHTIPAHSSLVSDVRYIESGVNRFIATSGYD 414
Query: 336 RAFRLFS 342
+L++
Sbjct: 415 GCVKLWN 421
Score = 122 (48.0 bits), Expect = 0.00055, P = 0.00055
Identities = 40/190 (21%), Positives = 84/190 (44%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ S + + +LW++ T +L +G P +V+ G +D + ++R
Sbjct: 280 LVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSG 339
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
+ ++ +R + A+A+S +G L S A + IW+L K L I AH + +
Sbjct: 340 KSIMVLDEHIR-QIVAMAWSPNGYQLATSSADD-TVKIWDLRKVSLAHTI-PAHSSLVSD 396
Query: 274 LHFFAN--EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILS 331
+ + + + ++ D +K+W + L++ GH + + Y G +S
Sbjct: 397 VRYIESGVNRFIATSGYDGCVKLW----NPLNCSLIKSMVGHEEKVMSVDGY--GDRFIS 450
Query: 332 AGQDRAFRLF 341
+G DR +L+
Sbjct: 451 SGYDRTIKLW 460
Score = 114 (45.2 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 34/158 (21%), Positives = 76/158 (48%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGL-L 530
H+ + +AC +L+ S G ++WD + G+ + E +V + + NG L
Sbjct: 306 HSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSP-NGYQL 364
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDG--KWLLSSGMDGSLRIWDVIL 588
AT + D ++++D+ + + H+ ++D + E G +++ +SG DG +++W+ +
Sbjct: 365 ATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLN 424
Query: 589 ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
I ++ V +S+ D ++ D+ + LW
Sbjct: 425 CSLIKSM-VGHEEKVMSVDGYGDRFISSGYDRT-IKLW 460
Score = 101 (40.6 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 32/126 (25%), Positives = 61/126 (48%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF--------- 277
+ + FS++G ASG+ G + +WN + + R H + + L ++
Sbjct: 175 IAIVRFSNNGNHF-ASGSWGGQVKVWNSDNLSEVQLFR-GHTDRVSGLDWYPLCQAWDAD 232
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRA 337
+ + L + +ADN++ +W + P LLR GH A + F+ +G +++SA D
Sbjct: 233 SEQLTLATGAADNTVCLW--KASQSTP-LLRLE-GHLARVGRVAFHPSGDYLVSASFDTT 288
Query: 338 FRLFSV 343
+RL+ V
Sbjct: 289 WRLWDV 294
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 137 (53.3 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 39/150 (26%), Positives = 71/150 (47%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIH 206
PDT L + G+ + S +LW++ F G P + A G D
Sbjct: 94 PDTRL--FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 151
Query: 207 VHNVRYDEELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIRE 265
+ ++R D+EL+T++H ++ +T+++FS G+ LLA G ++W+ K V+
Sbjct: 152 LFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLA-GYDDFNCNVWDALKADRAGVLA- 209
Query: 266 AHDNAIISLHFFANEPVLMSASADNSIKMW 295
HDN + L + + + S D+ +K+W
Sbjct: 210 GHDNRVSCLGVTDDGMAVATGSWDSFLKIW 239
Score = 128 (50.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 43/170 (25%), Positives = 78/170 (45%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FSSDGQPLLASGASSG 247
P+ + VA G D ++N++ E V + + G L+ F D Q + +SG ++
Sbjct: 7 PSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT- 65
Query: 248 VISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLL 307
++W++E + Q+ H ++SL + + +S + D S K+W D +G R
Sbjct: 66 -CALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW--DVREGMCRQT 121
Query: 308 RFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
F +GH + I F+ NG + D RLF + DQ+ S ++
Sbjct: 122 -F-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNI 169
Score = 74 (31.1 bits), Expect = 9.9e-09, Sum P(2) = 9.9e-09
Identities = 15/70 (21%), Positives = 31/70 (44%)
Query: 516 CSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
C + + + + LL DD ++D + GH +R++ ++DG + +
Sbjct: 171 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG 230
Query: 576 GMDGSLRIWD 585
D L+IW+
Sbjct: 231 SWDSFLKIWN 240
>RGD|1306281 [details] [associations]
symbol:Aamp "angio-associated, migratory cell protein"
species:10116 "Rattus norvegicus" [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0014909 "smooth muscle cell migration"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306281 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 CTD:14
GeneTree:ENSGT00690000102167 OMA:VWSFEVG EMBL:CH474004
RefSeq:NP_001100390.1 UniGene:Rn.13592 ProteinModelPortal:G3V7V2
PRIDE:G3V7V2 Ensembl:ENSRNOT00000019497 GeneID:301512
KEGG:rno:301512 NextBio:648863 Uniprot:G3V7V2
Length = 435
Score = 110 (43.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/153 (24%), Positives = 75/153 (49%)
Query: 435 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 494
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 283 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 337
Query: 495 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 553
G + ++D + L+ + + +V++++ ++ T + D V+RL+D R++ +
Sbjct: 338 LDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDY 397
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
GHT I DF S+D ++++ D +++ V
Sbjct: 398 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 430
Score = 104 (41.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 55/236 (23%), Positives = 94/236 (39%)
Query: 88 TWSRHSAKVNLLLLFGE-HILSID--IDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
T++ HSA V + L + + L++ D F+W E GH D T
Sbjct: 87 TFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGH---KDSVTCAGF 143
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
H T V G G L++W + TK++++ F+ G P V+ G +DG
Sbjct: 144 SHDSTL---VATGDMSGLLKVWQVETKEEVWSFEA-GDLEWMEWH-PRAPVLLAGTADGN 198
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ V + + TF T DG+ + G G I IW+L++ V++
Sbjct: 199 TWMWKVP-NGDCKTF-QGPNCPATCGRVLPDGKRAVV-GYEDGTIRIWDLKQGNPIHVLK 255
Query: 265 --EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
E H + + + ++++ S D K+ + TT + R + S P L
Sbjct: 256 GTEGHQGPLTCVATNQDGSLILTGSVDCQAKL-VSATTGKVVGVFRPETVASQPSL 310
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/207 (23%), Positives = 100/207 (48%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
V+ S + +L+++ I T + KG P +V G D + + +V+
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG 203
Query: 214 EELVTF-THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ T HS V+A++F+ DG L+ASG+ G++ IW+ + + + + +
Sbjct: 204 MCIKTLPAHS--DPVSAVSFNRDGS-LIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GR 327
+ F N +++++ D+++K+W D + G + L+ +GH CI +AN G+
Sbjct: 261 FVKFSPNGKYILASNLDSTLKLW--DFSKG--KTLKQYTGHENSKYCI--FANFSVTGGK 314
Query: 328 HILSAGQDRAFRLFSVIQDQQSRELSQ 354
I+S +D ++++ Q+RE+ Q
Sbjct: 315 WIISGSEDCKIYIWNL----QTREIVQ 337
Score = 125 (49.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/165 (23%), Positives = 80/165 (48%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V+ + +L+ S Y G +++WD G+ +K+ + V V NG
Sbjct: 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKY 270
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFC----FS-EDGKWLLSSGMDGSLRI 583
+LA+ D ++L+D + ++++ GH + + +C FS GKW++S D + I
Sbjct: 271 ILASNLDS-TLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWIISGSEDCKIYI 327
Query: 584 WDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVD-QNGVYLW 626
W++ + + + A P +++A+ ++ N +++W
Sbjct: 328 WNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00064
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 485
++ + S CG + +A ++ +N+ I ER+ H V +A S
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMDHMIC--------ERTLTGHKLGVNDIAWSSD 140
Query: 486 NTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 544
+ ++SA +K+++ R K+ + ++ + L+ + + D +R++DV
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 545 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--IT 602
++ H+D ++ F+ DG + S DG +RIWD + I + D + +
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 603 ALSLSPNMDVLATAHVDQNGVYLW 626
+ SPN + +++D + LW
Sbjct: 261 FVKFSPNGKYILASNLDST-LKLW 283
Score = 118 (46.6 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 27/115 (23%), Positives = 61/115 (53%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 531
HN V + ++L++S + +++WD K G +K+ + + ++R L+A
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIA 229
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWD 585
+ + D ++R++D + ++ + F FS +GK++L+S +D +L++WD
Sbjct: 230 SGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 86 (35.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
++++ FS G+ L S A + IWN++ + + H + + + ++ ++S
Sbjct: 89 SISSAKFSPCGKYLGTSSADK-TVKIWNMDHMICERTLT-GHKLGVNDIAWSSDSRCVVS 146
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
AS D ++K IF+ R+ + GH+ C F ++S D + R++ V
Sbjct: 147 ASDDKTLK--IFEIVTS--RMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Score = 85 (35.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H +I S F L ++SAD ++K+W D + L +GH I + +
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTL----TGHKLGVNDIAWSS 139
Query: 325 NGRHILSAGQDRAFRLFSVIQDQQSREL 352
+ R ++SA D+ ++F ++ + ++ L
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTL 167
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 151 (58.2 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 49/207 (23%), Positives = 100/207 (48%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
V+ S + +L+++ I T + KG P +V G D + + +V+
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTG 203
Query: 214 EELVTF-THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ T HS V+A++F+ DG L+ASG+ G++ IW+ + + + + +
Sbjct: 204 MCIKTLPAHS--DPVSAVSFNRDGS-LIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GR 327
+ F N +++++ D+++K+W D + G + L+ +GH CI +AN G+
Sbjct: 261 FVKFSPNGKYILASNLDSTLKLW--DFSKG--KTLKQYTGHENSKYCI--FANFSVTGGK 314
Query: 328 HILSAGQDRAFRLFSVIQDQQSRELSQ 354
I+S +D ++++ Q+RE+ Q
Sbjct: 315 WIISGSEDCKIYIWNL----QTREIVQ 337
Score = 125 (49.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 38/165 (23%), Positives = 80/165 (48%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V+ + +L+ S Y G +++WD G+ +K+ + V V NG
Sbjct: 211 AHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKY 270
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFC----FS-EDGKWLLSSGMDGSLRI 583
+LA+ D ++L+D + ++++ GH + + +C FS GKW++S D + I
Sbjct: 271 ILASNLDS-TLKLWDFSKGKTLKQYTGHEN--SKYCIFANFSVTGGKWIISGSEDCKIYI 327
Query: 584 WDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVD-QNGVYLW 626
W++ + + + A P +++A+ ++ N +++W
Sbjct: 328 WNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPDNKIHIW 372
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00064
Identities = 42/204 (20%), Positives = 89/204 (43%)
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDST 485
++ + S CG + +A ++ +N+ I ER+ H V +A S
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNMDHMIC--------ERTLTGHKLGVNDIAWSSD 140
Query: 486 NTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 544
+ ++SA +K+++ R K+ + ++ + L+ + + D +R++DV
Sbjct: 141 SRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Query: 545 VALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--IT 602
++ H+D ++ F+ DG + S DG +RIWD + I + D + +
Sbjct: 201 KTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVA 260
Query: 603 ALSLSPNMDVLATAHVDQNGVYLW 626
+ SPN + +++D + LW
Sbjct: 261 FVKFSPNGKYILASNLDST-LKLW 283
Score = 118 (46.6 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 27/115 (23%), Positives = 61/115 (53%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLA 531
HN V + ++L++S + +++WD K G +K+ + + ++R L+A
Sbjct: 170 HNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIA 229
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWD 585
+ + D ++R++D + ++ + F FS +GK++L+S +D +L++WD
Sbjct: 230 SGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWD 284
Score = 86 (35.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/118 (22%), Positives = 54/118 (45%)
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
++++ FS G+ L S A + IWN++ + + H + + + ++ ++S
Sbjct: 89 SISSAKFSPCGKYLGTSSADK-TVKIWNMDHMICERTLT-GHKLGVNDIAWSSDSRCVVS 146
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
AS D ++K IF+ R+ + GH+ C F ++S D + R++ V
Sbjct: 147 ASDDKTLK--IFEIVTS--RMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDV 200
Score = 85 (35.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
E H +I S F L ++SAD ++K+W D + L +GH I + +
Sbjct: 84 EGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTL----TGHKLGVNDIAWSS 139
Query: 325 NGRHILSAGQDRAFRLFSVIQDQQSREL 352
+ R ++SA D+ ++F ++ + ++ L
Sbjct: 140 DSRCVVSASDDKTLKIFEIVTSRMTKTL 167
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/264 (23%), Positives = 121/264 (45%)
Query: 81 KRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFT 140
+ AH+ A WS K + E ++S +D + +W K +E L ++
Sbjct: 12 EHAHEDAIWSVGWGKNSND--GSELVISGSLDDLVKVW--KWSDERLELQSTLEGHQLGV 67
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGC 200
+ + P N + S + ++LW++ + K++ P +A G
Sbjct: 68 VSVDVSPSG--NIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGS 125
Query: 201 SDGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNLEKRRL 259
GK+++ V ++ ++ RG + ++A+S DG+ LASGA G+I+I+++ +L
Sbjct: 126 HVGKVNIFGVETGKK--EYSLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGKL 182
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 319
+ E H I SL F + +L++AS D IK I++ L SGH + L
Sbjct: 183 LHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIK--IYEVQHAS--LAATLSGHGSWVLN 237
Query: 320 IRFYANGRHILSAGQDRAFRLFSV 343
+ F + H +S+ D++ +++ V
Sbjct: 238 VAFSPDDTHFVSSSSDKSVKVWDV 261
Score = 152 (58.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/241 (22%), Positives = 104/241 (43%)
Query: 103 GEHILSIDIDGNMFIWAFK-GIEENLAPVGHVKLDDKFTPTCIMHPDTYLNKVIVGSQEG 161
G + S +D ++ +W + G + G V D ++ PD+ + GS G
Sbjct: 76 GNIMASSSLDAHIRLWDLESGKQIRAIDAGPV---DAWSVA--FSPDS--QHLATGSHVG 128
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFT- 220
+ ++ + T KK Y G P +A G DG I++ ++ + L T
Sbjct: 129 KVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEG 188
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
H+M + +L FS D Q LL + + G I I+ ++ L + + H + ++++ F ++
Sbjct: 189 HAM--PIRSLTFSPDSQ-LLVTASDDGYIKIYEVQHASLAATL-SGHGSWVLNVAFSPDD 244
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
+S+S+D S+K+W L H +++ NG I+S D+ +
Sbjct: 245 THFVSSSSDKSVKVWDVSARTCVHTFL----DHQDQVWGVKYNKNGSKIVSVADDQEIHV 300
Query: 341 F 341
+
Sbjct: 301 Y 301
Score = 99 (39.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/140 (21%), Positives = 62/140 (44%)
Query: 221 HSMRGAVTALAF---SSDGQPLLASGASSGVISIWNL--EKRRLQSVIREAHDNAIISLH 275
H+ A+ ++ + S+DG L+ SG+ ++ +W E+ LQS + E H ++S+
Sbjct: 13 HAHEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSDERLELQSTL-EGHQLGVVSVD 71
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
+ ++ S+S D I++W D G + +R + F + +H+ +
Sbjct: 72 VSPSGNIMASSSLDAHIRLW--DLESG--KQIRAIDAGPVDAWSVAFSPDSQHLATGSHV 127
Query: 336 RAFRLFSVIQDQQSRELSQR 355
+F V ++ L R
Sbjct: 128 GKVNIFGVETGKKEYSLDTR 147
Score = 79 (32.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 29/151 (19%), Positives = 65/151 (43%)
Query: 436 GNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYH 495
G + G G I F+ I+ G L E H + + + L+++A
Sbjct: 160 GKYLASGAIDGIINIFD----IATGKLLHTLE----GHAMPIRSLTFSPDSQLLVTASDD 211
Query: 496 GDIKVWDFKGRDLKSRWEV-GCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFE 554
G IK+++ + L + G ++ + + + + + D ++++DV A V F
Sbjct: 212 GYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFL 271
Query: 555 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
H D++ ++++G ++S D + ++D
Sbjct: 272 DHQDQVWGVKYNKNGSKIVSVADDQEIHVYD 302
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 167 (63.8 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/267 (24%), Positives = 115/267 (43%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKL 135
V K A ++ H++ V+ L+L G + + D + +W+ ++ GH
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT-- 63
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
+P + +T ++ GSQ GS+++W++ K L G P +
Sbjct: 64 ----SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
VA G D I + ++R + + HS AV L FS DG+ LAS A + +W+L
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDL 176
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
++ S H + + F NE +L S S+D +I+ W + +++ G
Sbjct: 177 TAGKMMSEF-PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QVVSCIEGEP 231
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLF 341
P I F +G + S QD + R++
Sbjct: 232 GPVRSILFNPDGCCLYSGCQD-SLRVY 257
Score = 164 (62.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 44/194 (22%), Positives = 85/194 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 649
+ H + + PN +LA+ D+ + W + F S I+ +
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSIL 238
Query: 650 VKMPSVSSVEGCQD 663
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 143 (55.4 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 45/188 (23%), Positives = 81/188 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 99 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N + S D
Sbjct: 155 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 336 RAFRLFSV 343
R R + +
Sbjct: 211 RTIRFWDL 218
Score = 140 (54.3 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 454 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 512 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 571 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 627
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 628 NRC 630
RC
Sbjct: 262 ERC 264
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 92 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 117 (46.2 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 47/168 (27%), Positives = 73/168 (43%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 526
ER H G V+ A S T S K+W F+ + S V+ +
Sbjct: 1078 ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSL 1137
Query: 527 NG-LLATVADDLVIRLFDVV---ALRMVRKF---EG---HTDRITDFCFSEDGKWLLSSG 576
+G LLAT D+ IR+++V L + EG H +TD CFS D K L+S+G
Sbjct: 1138 DGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAG 1197
Query: 577 MDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 623
G L+ W+V+ + + ++ + +SP+ T VD G+
Sbjct: 1198 --GYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVT--VDNLGI 1241
Score = 107 (42.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/146 (24%), Positives = 69/146 (47%)
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVI 263
I+ ++ LV H+ AV FS DGQ + + GA + ++ E +L +
Sbjct: 598 INKKTIKNLSRLVVRPHT--DAVYHACFSQDGQRIASCGADK-TLQVFKAETGEKLLDI- 653
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
+AH++ ++ F +++ + + S D +K+W D+ G +L+ HS C F
Sbjct: 654 -KAHEDEVLCCAFSSDDSYIATCSVDKKVKIW--DSGTG--KLVHTYEEHSEQVNCCHFT 708
Query: 324 ANGRHILSA-GQDRAF-RLFSVIQDQ 347
H+L A G + +F +L+ + Q +
Sbjct: 709 NKSNHLLLATGSNDSFLKLWDLNQKE 734
Score = 82 (33.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 43/176 (24%), Positives = 76/176 (43%)
Query: 489 MISAGYHGDIKVWD-FKGR-DLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVA 546
++S + G +KVW+ GR + G L + +T AD +++
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTA-KIWSFEL 1116
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVDVS-- 600
+ + +GH + FS DG LL++G D G +RIW+V L I ++
Sbjct: 1117 PSPLHELKGHNSCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTA 1175
Query: 601 -----ITALSLSPNMDVLATAHVDQNGVYL-WVNRCMFSGDSNIDSYASGKEIVSV 650
+T + SP+ +L +A G YL W N + +G+S+ Y +G + +
Sbjct: 1176 THGGWVTDVCFSPDRKMLVSA-----GGYLKWWN--VVTGESSQTFYTNGTNLKKI 1224
Score = 75 (31.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 240 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 299
+A G G I I L R+ S H A+ + F A+ L+S+S D+ I++W + T
Sbjct: 976 VAFGDEEGAIKIIELPNNRVFSS-GIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034
Query: 300 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
+ F H R + R +LS D ++++VI + R+ +
Sbjct: 1035 EE-----YVFLQAHQETVKDFRLLRDSR-LLSWSFDGTVKVWNVITGRIERDFT 1082
Score = 75 (31.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 34/162 (20%), Positives = 66/162 (40%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYHR 525
S H V + + +IS+ I+VW+++ + L++ E VK
Sbjct: 998 SGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQET----VKDFRLL 1053
Query: 526 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ L + + D +++++V+ R+ R F H + S D S+ D + +IW
Sbjct: 1054 RDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113
Query: 586 VILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNG-VYLW 626
L + + S S ++D + A D NG + +W
Sbjct: 1114 FELPSPLHELKGHNSCVRCSAF-SLDGILLATGDDNGEIRIW 1154
Score = 70 (29.7 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 38/197 (19%), Positives = 82/197 (41%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + L+LW+++ K+ G P +++A +DG + + +VR E
Sbjct: 719 GSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEK 778
Query: 217 VT------FTHS------MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ F S + V ++S+DG ++ A+ + + ++ L + I
Sbjct: 779 KSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIV--AAKNKVLLLDIHTSGLLTEIH 836
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
H + I F + + + A + +++W D+ ++ R GH + + F
Sbjct: 837 TGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSR---VKVADCR-GHLSWVHGVMFSP 892
Query: 325 NGRHILSAGQDRAFRLF 341
+G L+A D+ R++
Sbjct: 893 DGSSFLTASDDQTIRVW 909
Score = 46 (21.3 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKG 179
C P +L ++ + ++LWNI ++ K+ + +G
Sbjct: 846 CDFSPYDHL--AVIALSQYCVELWNIDSRVKVADCRG 880
>UNIPROTKB|C9JLV4 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
InterPro:IPR011047 SUPFAM:SSF50998 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 EMBL:AC011248
HOGENOM:HOG000290173 HGNC:HGNC:576 EMBL:AC013283 IPI:IPI00953387
SMR:C9JLV4 STRING:C9JLV4 Ensembl:ENST00000339433
Ensembl:ENST00000549007 Uniprot:C9JLV4
Length = 1163
Score = 118 (46.6 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/147 (26%), Positives = 70/147 (47%)
Query: 162 SLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVHNVRYDEELVTFT 220
+LQ++ T +KL E K +A CS D K+ + N E + T+
Sbjct: 638 TLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIAT-CSVDKKVKIWNSMTGELVHTYD 696
Query: 221 -HSMRGAVTALAFSSDGQPLL-ASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA 278
HS + V F++ LL A+G+S + +W+L ++ ++ + H N++ F
Sbjct: 697 EHSEQ--VNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMF-GHTNSVNHCRFSP 753
Query: 279 NEPVLMSASADNSIKMWIFDTTDGDPR 305
++ +L S SAD ++K+W D T + R
Sbjct: 754 DDKLLASCSADGTLKLW--DATSANER 778
Score = 105 (42.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 39/149 (26%), Positives = 67/149 (44%)
Query: 486 NTLMISAGYHGDIKVWDF-KGRDLKSR-WEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 543
N+ ++S + G +KVW+ G K G L + H +T AD ++++
Sbjct: 1012 NSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTA-KIWN 1070
Query: 544 VV---ALRMVRKF--EG---HTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI 595
V L + EG H +TD CFS DGK L+S+G G ++ W+V+
Sbjct: 1071 VSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESSQTF 1128
Query: 596 HVD-VSITALSLSPNMDVLATAHVDQNGV 623
+ + ++ + +SP+ T VD G+
Sbjct: 1129 YTNGTNLKKIHVSPDFKTYVT--VDNLGI 1155
Score = 103 (41.3 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 36/146 (24%), Positives = 67/146 (45%)
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVI 263
I+ N+ LV H+ AV FS DGQ + + GA + ++ E +L +
Sbjct: 598 INKKNITNLSRLVVRPHT--DAVYHACFSEDGQRIASCGADK-TLQVFKAETGEKLLEI- 653
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
+AH++ ++ F ++ + + S D +K+W ++ G+ L+ HS C F
Sbjct: 654 -KAHEDEVLCCAFSTDDRFIATCSVDKKVKIW--NSMTGE--LVHTYDEHSEQVNCCHFT 708
Query: 324 ANGRHILSA-GQDRAF-RLFSVIQDQ 347
+ H+L A G F +L+ + Q +
Sbjct: 709 NSSHHLLLATGSSDCFLKLWDLNQKE 734
Score = 71 (30.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 49/237 (20%), Positives = 93/237 (39%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V C +S + G G IE L ++ + +S + H V + +
Sbjct: 921 VSCCCLSPHLQYIAFGDENGAIEILEL---VNNRIF-----QSRFQHKKTVWHIQFTADE 972
Query: 487 TLMISAGYHGDIKVWDF---KGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFD 543
+IS+ +I+VW++ K L+ E VK N L + + D +++++
Sbjct: 973 KTLISSSDDAEIQVWNWQLDKCIFLRGHQET----VKDFRLLKNSRLLSWSFDGTVKVWN 1028
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI----------LARQID 593
++ + F H + S D S+ D + +IW+V L+ +
Sbjct: 1029 IITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWNVSNGELLHLCAPLSEEGA 1088
Query: 594 AIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSV 650
A H +T L SP+ +L +A G W N + +G+S+ Y +G + +
Sbjct: 1089 ATHGGW-VTDLCFSPDGKMLISA----GGYIKWWN--VVTGESSQTFYTNGTNLKKI 1138
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 150 (57.9 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 53/214 (24%), Positives = 88/214 (41%)
Query: 85 QVATWSRHSAKV--NLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHV-KLDDKFTP 141
++ T HS V L +LS D + W K + GH + D
Sbjct: 346 EIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVS 405
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS 201
C ++ T S + + +LW+ + L + G P + +A G +
Sbjct: 406 PCSLYFST-------ASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGST 458
Query: 202 DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
D + + + R + FT RG V LAFS +G+ LAS + +W+L L
Sbjct: 459 DKTVRLWSTRQGASVRLFT-GHRGPVLTLAFSPNGK-YLASAGEDQRLKLWDLASGGLFK 516
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+R H + I SL F + ++ SAS DN++++W
Sbjct: 517 DLR-GHTDTISSLSFSQDSSLVASASMDNTVRVW 549
Score = 148 (57.2 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 51/176 (28%), Positives = 84/176 (47%)
Query: 491 SAGYHGDIKVWDFKGRDLKSRWEVG-CSLVKIV-YHRVNGLLATVADDLVIRLFDVVALR 548
+A + ++W F R R G S V V +H + +AT + D +RL+
Sbjct: 413 TASHDRTARLWSF-ARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGA 471
Query: 549 MVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSL 606
VR F GH + FS +GK+L S+G D L++WD+ + H D +I++LS
Sbjct: 472 SVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTD-TISSLSF 530
Query: 607 SPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQ 662
S + ++A+A +D N V +W R G + D +S E++ S S++ Q
Sbjct: 531 SQDSSLVASASMD-NTVRVWDIRNAH-GSAPTDGCSS--ELIGQYTGSTSNILNVQ 582
Score = 111 (44.1 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 221 HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANE 280
HS G V AF +D LL+ S + W+L K +V+ H + +
Sbjct: 353 HS--GPVYRTAFLTDASGLLSCSEDS-TVRYWDL-KSFTNTVLYRGHAYPVWDVDVSPCS 408
Query: 281 PVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL 340
+AS D + ++W F T P LR +GH + C++F+ N +I + D+ RL
Sbjct: 409 LYFSTASHDRTARLWSFARTY--P--LRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRL 464
Query: 341 FSVIQDQQSR 350
+S Q R
Sbjct: 465 WSTRQGASVR 474
Score = 72 (30.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 33/125 (26%), Positives = 59/125 (47%)
Query: 219 FTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFA 278
F H+ + TA S+D + LLA+G + + +W+L R+L++ +A D + I L A
Sbjct: 276 FQHTEQLLNTA-EVSADSR-LLAAGFDNSAVKLWSLRARKLKAGPHKA-DVSKIRL---A 329
Query: 279 NEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAF 338
+ ++ AD+ D + + + LR GHS P F + +LS +D
Sbjct: 330 CD--VLEEEADDE------DASGSEIKTLR---GHSGPVYRTAFLTDASGLLSCSEDSTV 378
Query: 339 RLFSV 343
R + +
Sbjct: 379 RYWDL 383
Score = 67 (28.6 bits), Expect = 0.00036, Sum P(3) = 0.00036
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG----RDLKSRWEVGCSLVKIVYHRVNG 528
H G V+ +A + SAG +K+WD +DL+ + SL + + +
Sbjct: 479 HRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTISSLS---FSQDSS 535
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSE 567
L+A+ + D +R++D+ R H TD C SE
Sbjct: 536 LVASASMDNTVRVWDI---R-----NAHGSAPTDGCSSE 566
Score = 38 (18.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 153 KVIVGSQEGSLQLWNISTKKKL 174
K IV G+L L +++T KL
Sbjct: 133 KAIVDLLRGALTLQDVTTNPKL 154
>UNIPROTKB|F1NM37 [details] [associations]
symbol:TBL3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006364 "rRNA processing" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364
GO:GO:0032040 OMA:HHFRGSP GeneTree:ENSGT00690000102183
EMBL:AADN02023671 EMBL:AADN02023670 IPI:IPI00583117
Ensembl:ENSGALT00000008918 Uniprot:F1NM37
Length = 812
Score = 156 (60.0 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 42/155 (27%), Positives = 74/155 (47%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR-VNGL- 529
H V + DST+TL+ + G IK+WD + + +V +V +H ++ L
Sbjct: 109 HIAPVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQ 168
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L + + D IR++D+ + + V +GH +T F+ DG L+SSG D +W++
Sbjct: 169 LFSSSMDYKIRIWDLNSSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDKICMVWNLKTR 228
Query: 590 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 624
I I + S+ A L P + V + G++
Sbjct: 229 ESIRTIPIYESVEAAVLLPEQGDFSQLGVKKQGLH 263
Score = 137 (53.3 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 43/166 (25%), Positives = 77/166 (46%)
Query: 137 DKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVV 196
DK + + P+ L + GSQ+ +LW+ L F G P ++
Sbjct: 490 DKDINSVAVSPNDKL--IATGSQDRLAKLWSCPDCSLLGVFTGHKRGIWCVQFSPVDQIL 547
Query: 197 AVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
A +DG + + ++ L TF H +V + F S G LL SG S G++ +W ++
Sbjct: 548 ATSSADGTLKLWGLQDFSCLKTFEGHD--ASVLKIIFVSRGTQLL-SGGSDGLLKLWTIK 604
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTD 301
+ + H++ I LH + ++++AS+D+SI +W D T+
Sbjct: 605 TNECVKTL-DGHEDKIWGLHTNKQDDMVVTASSDSSITLWK-DVTE 648
Score = 120 (47.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 44/169 (26%), Positives = 76/169 (44%)
Query: 462 YLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDI-KVWDFKGRDLKSRWEVGCSLVK 520
+ M+ER H+ ++ VA S N +I+ G + K+W L + +
Sbjct: 481 HAQMTERG---HDKDINSVAV-SPNDKLIATGSQDRLAKLWSCPDCSLLGVFTGHKRGIW 536
Query: 521 IV-YHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
V + V+ +LAT + D ++L+ + ++ FEGH + F G LLS G DG
Sbjct: 537 CVQFSPVDQILATSSADGTLKLWGLQDFSCLKTFEGHDASVLKIIFVSRGTQLLSGGSDG 596
Query: 580 SLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
L++W + + + H D I L + D++ TA D + + LW
Sbjct: 597 LLKLWTIKTNECVKTLDGHED-KIWGLHTNKQDDMVVTASSDSS-ITLW 643
Score = 99 (39.9 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 31/136 (22%), Positives = 65/136 (47%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGC 200
P M D+ + G + ++++W++ + + KG P + + +
Sbjct: 112 PVATMVFDSTSTLLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFS 171
Query: 201 S--DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
S D KI + ++ + V AVT+LAF++DG L++SG + +WNL+ R
Sbjct: 172 SSMDYKIRIWDLN-SSKCVAVLDGHFSAVTSLAFTADGNTLISSGRDK-ICMVWNLKTRE 229
Query: 259 -LQSV-IREAHDNAII 272
++++ I E+ + A++
Sbjct: 230 SIRTIPIYESVEAAVL 245
Score = 93 (37.8 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 26/111 (23%), Positives = 53/111 (47%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVLMS 285
V + F S LLA+G I IW++ K+ ++ + ++ H + L S
Sbjct: 113 VATMVFDSTST-LLATGGCDSTIKIWDMIKQYCTHNLKGSSGVVHLVEFHPDISRLQLFS 171
Query: 286 ASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDR 336
+S D I++W +++ + + GH + + F A+G ++S+G+D+
Sbjct: 172 SSMDYKIRIWDLNSS----KCVAVLDGHFSAVTSLAFTADGNTLISSGRDK 218
Score = 79 (32.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 21/97 (21%), Positives = 46/97 (47%)
Query: 200 CSDG-KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
C G K++V +V L + + +T+ S D + +L +G+ + ++ WN + R
Sbjct: 42 CPCGTKLNVIDVETGALLHSLEQDDQEDITSFVLSPDDE-VLVTGSRALLLKQWNWRENR 100
Query: 259 LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+ H + ++ F + +L + D++IK+W
Sbjct: 101 CVRTWKAVHIAPVATMVFDSTSTLLATGGCDSTIKIW 137
Score = 72 (30.4 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 31/150 (20%), Positives = 62/150 (41%)
Query: 208 HN-VRYDEELVTFTHSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
HN V YD + + + G V + F G + +S + ++ L Q I
Sbjct: 324 HNIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELSTSHCQ--I 381
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS---APPLCI 320
H I++L F + +S + D SI++W + DG + GH+ C
Sbjct: 382 LYGHTETILALDVFRKGLMFVSCAKDKSIRVWRMNK-DGRVVCVAQGLGHAHGVGAVSCS 440
Query: 321 RFYANGRHILSAGQDRAFRLFSVIQDQQSR 350
R + ++++ QD +++++ + S+
Sbjct: 441 RLKES--FVVTSSQDCTIKVWNIPESLTSK 468
Score = 54 (24.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 47 NLVLVGPQLPKKIRALASYRDYT----FAAYGN-HIAVVKRAHQVATWSRHSAKVNLLLL 101
N+V Q + + LA Y D F G+ HI V + Q+ + ++ +L
Sbjct: 325 NIVFYDAQTLQLRKQLAGYNDEVLDVKFLGPGDSHIVVATNSPQLKVFELSTSHCQILYG 384
Query: 102 FGEHILSIDI--DGNMFI 117
E IL++D+ G MF+
Sbjct: 385 HTETILALDVFRKGLMFV 402
Score = 37 (18.1 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 151 LNKVIVGSQEGSLQLWNISTKKKLY 175
L+ + GS+ G L++W ++T +Y
Sbjct: 262 LHFLTAGSK-GVLKVWEVATAACVY 285
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 64/267 (23%), Positives = 115/267 (43%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKL 135
V K A ++ H++ V+ L+L G + + D + +W+ ++ GH
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT-- 63
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
+P + +T ++ GSQ GS+++W++ K L G P +
Sbjct: 64 ----SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
VA G D I + ++R + + HS AV L FS DG+ LAS A + +W+L
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDL 176
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
++ S H + + F NE +L S S+D +I+ W + +++ G
Sbjct: 177 TAGKMMSEF-PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QVVSCIEGEP 231
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLF 341
P + F +G + S QD + R++
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 649
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 650 VKMPSVSSVEGCQD 663
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 143 (55.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 45/188 (23%), Positives = 81/188 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 99 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N + S D
Sbjct: 155 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 336 RAFRLFSV 343
R R + +
Sbjct: 211 RTIRFWDL 218
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 454 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 512 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 571 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 627
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 628 NRC 630
RC
Sbjct: 262 ERC 264
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 92 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 64/267 (23%), Positives = 115/267 (43%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKL 135
V K A ++ H++ V+ L+L G + + D + +W+ ++ GH
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT-- 63
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
+P + +T ++ GSQ GS+++W++ K L G P +
Sbjct: 64 ----SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
VA G D I + ++R + + HS AV L FS DG+ LAS A + +W+L
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDL 176
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
++ S H + + F NE +L S S+D +I+ W + +++ G
Sbjct: 177 TAGKMMSEF-PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QVVSCIEGEP 231
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLF 341
P + F +G + S QD + R++
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 649
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 650 VKMPSVSSVEGCQD 663
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 143 (55.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 45/188 (23%), Positives = 81/188 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 99 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N + S D
Sbjct: 155 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 336 RAFRLFSV 343
R R + +
Sbjct: 211 RTIRFWDL 218
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 454 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 512 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 571 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 627
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 628 NRC 630
RC
Sbjct: 262 ERC 264
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 92 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 64/267 (23%), Positives = 115/267 (43%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKL 135
V K A ++ H++ V+ L+L G + + D + +W+ ++ GH
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT-- 63
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
+P + +T ++ GSQ GS+++W++ K L G P +
Sbjct: 64 ----SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
VA G D I + ++R + + HS AV L FS DG+ LAS A + +W+L
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDL 176
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
++ S H + + F NE +L S S+D +I+ W + +++ G
Sbjct: 177 TAGKMMSEF-PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QVVSCIEGEP 231
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLF 341
P + F +G + S QD + R++
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 649
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 650 VKMPSVSSVEGCQD 663
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 143 (55.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 45/188 (23%), Positives = 81/188 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 99 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N + S D
Sbjct: 155 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 336 RAFRLFSV 343
R R + +
Sbjct: 211 RTIRFWDL 218
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 454 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 512 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 571 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 627
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 628 NRC 630
RC
Sbjct: 262 ERC 264
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 92 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 64/267 (23%), Positives = 115/267 (43%)
Query: 79 VVKRAHQVATWSRHSAKVNLLLL---FGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKL 135
V K A ++ H++ V+ L+L G + + D + +W+ ++ GH
Sbjct: 6 VTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHT-- 63
Query: 136 DDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDV 195
+P + +T ++ GSQ GS+++W++ K L G P +
Sbjct: 64 ----SPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF 119
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
VA G D I + ++R + + HS AV L FS DG+ LAS A + +W+L
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQ--AVRCLRFSPDGK-WLASAADDHTVKLWDL 176
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
++ S H + + F NE +L S S+D +I+ W + +++ G
Sbjct: 177 TAGKMMSEF-PGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKF----QVVSCIEGEP 231
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLF 341
P + F +G + S QD + R++
Sbjct: 232 GPVRSVLFNPDGCCLYSGCQD-SLRVY 257
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 45/194 (23%), Positives = 85/194 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H V V ++ L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+D+ V ++ GH+ + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKM 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVS 649
+ H + + PN +LA+ D+ + W + F S I+ V
Sbjct: 182 MSEFPGHTG-PVNVVEFHPNEYLLASGSSDRT-IRFW-DLEKFQVVSCIEGEPGPVRSVL 238
Query: 650 VKMPSVSSVEGCQD 663
GCQD
Sbjct: 239 FNPDGCCLYSGCQD 252
Score = 143 (55.4 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 45/188 (23%), Positives = 81/188 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
G + + LW+I+ + G +++ G G I V ++ + L
Sbjct: 39 GGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKIL 98
Query: 217 VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLH 275
T + + +L F G+ +ASG+ I +W++ RR V R H A+ L
Sbjct: 99 RTLM-GHKANICSLDFHPYGE-FVASGSQDTNIKLWDI--RRKGCVFRYRGHSQAVRCLR 154
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F + L SA+ D+++K+W D T G +++ GH+ P + F+ N + S D
Sbjct: 155 FSPDGKWLASAADDHTVKLW--DLTAG--KMMSEFPGHTGPVNVVEFHPNEYLLASGSSD 210
Query: 336 RAFRLFSV 343
R R + +
Sbjct: 211 RTIRFWDL 218
Score = 139 (54.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/183 (25%), Positives = 86/183 (46%)
Query: 454 QSGISRGSYLDMSE--RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSR 511
QSG R L+ ++ R+ H + + + S +IK+WD + + R
Sbjct: 83 QSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFR 142
Query: 512 WEVGCSLVKIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
+ V+ + +G LA+ ADD ++L+D+ A +M+ +F GHT + F + +
Sbjct: 143 YRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPN-E 201
Query: 571 WLLSSGM-DGSLRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAHVDQNGVYLWV- 627
+LL+SG D ++R WD+ + + I + + ++ +P+ L + D VY W
Sbjct: 202 YLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEP 261
Query: 628 NRC 630
RC
Sbjct: 262 ERC 264
Score = 138 (53.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/158 (25%), Positives = 78/158 (49%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D ++++ ++ +++ T H+ V ++ ++ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHT--SPVESVRLNTP-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D +IK+W G + R+R GH
Sbjct: 92 LEAAKILRTLM-GHKANICSLDFHPYGEFVASGSQDTNIKLWDI-RRKGC--VFRYR-GH 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRE 351
S C+RF +G+ + SA D +L+ + + E
Sbjct: 147 SQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 113 (44.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 50/173 (28%), Positives = 76/173 (43%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS-----RWEVGCSLVKI 521
ER H G V+ A S T S K+W F DL S + GC V+
Sbjct: 1078 ERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSF---DLLSPLHELKGHNGC--VRC 1132
Query: 522 VYHRVNG-LLATVADDLVIRLFDVVALRMVRKF------EG---HTDRITDFCFSEDGKW 571
++G LLAT D+ IR+++V +++ EG H +TD CFS D K
Sbjct: 1133 SAFSLDGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT 1192
Query: 572 LLSSGMDGSLRIWDVILARQIDAIHVD-VSITALSLSPNMDVLATAHVDQNGV 623
L+S+G G L+ W+V + + ++ + +SP+ T VD G+
Sbjct: 1193 LVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVT--VDNLGI 1241
Score = 110 (43.8 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 37/146 (25%), Positives = 69/146 (47%)
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVI 263
I+ ++ LV H+ AV FS DGQ + + GA + ++ E +L +
Sbjct: 598 INKKTIKNLSRLVVRPHT--DAVYHACFSQDGQRIASCGADK-TLQVFKAETGEKLLDI- 653
Query: 264 REAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFY 323
+AH++ ++ F +++ + + SAD +K+W D+ G +L+ HS C F
Sbjct: 654 -KAHEDEVLCCAFSSDDSYIATCSADKKVKIW--DSATG--KLVHTYDEHSEQVNCCHFT 708
Query: 324 ANGRHILSA-GQDRAF-RLFSVIQDQ 347
H+L A G + F +L+ + Q +
Sbjct: 709 NKSNHLLLATGSNDFFLKLWDLNQKE 734
Score = 93 (37.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 49/177 (27%), Positives = 77/177 (43%)
Query: 489 MISAGYHGDIKVWD-FKGR-DLKSRWEVGCSLVKIVYHRVNGLLATVADDLV-IRLFDVV 545
++S + G +KVW+ GR + G L + +T AD I FD+
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDL- 1116
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMD-GSLRIWDVI---LARQIDAIHVDVS- 600
L + + +GH + FS DG LL++G D G +RIW+V L I V+
Sbjct: 1117 -LSPLHELKGHNGCVRCSAFSLDGI-LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGT 1174
Query: 601 ------ITALSLSPNMDVLATAHVDQNGVYL-WVNRCMFSGDSNIDSYASGKEIVSV 650
+T + SP+ L +A G YL W N + +GDS+ Y +G + +
Sbjct: 1175 ATHGGWVTDVCFSPDSKTLVSA-----GGYLKWWN--VATGDSSQTFYTNGTNLKKI 1224
Score = 80 (33.2 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 240 LASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT 299
+A G G I I L R+ S H A+ + F A+ L+S+S D+ I++W + T
Sbjct: 976 VAFGDEDGAIKIIELPNNRVFSS-GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQT 1034
Query: 300 TDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
GD F H R + R +LS D ++++VI + R+ +
Sbjct: 1035 --GD---YVFLQAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRIERDFT 1082
Score = 75 (31.5 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 39/165 (23%), Positives = 69/165 (41%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRD---LKSRWEVGCSLVKIVYHR 525
S H V + + +IS+ I+VW+++ D L++ E VK
Sbjct: 998 SGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQET----VKDFRLL 1053
Query: 526 VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ L + + D +++++V+ R+ R F H + S D S+ D + +IW
Sbjct: 1054 QDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113
Query: 586 VILARQIDAI--HVD-VSITALSLSPNMDVLATAHVDQNG-VYLW 626
L + + H V +A SL + LAT D NG + +W
Sbjct: 1114 FDLLSPLHELKGHNGCVRCSAFSLDGIL--LATG--DDNGEIRIW 1154
Score = 46 (21.3 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKG 179
C P +L ++ + ++LWNI ++ K+ + +G
Sbjct: 846 CDFSPYDHL--AVIALSQYCVELWNIDSRLKVADCRG 880
Score = 38 (18.4 bits), Expect = 0.00088, Sum P(3) = 0.00088
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 776 QLLHSCA 782
QLLHSCA
Sbjct: 1160 QLLHSCA 1166
>UNIPROTKB|Q3SZK1 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9913 "Bos taurus" [GO:0045766 "positive regulation of
angiogenesis" evidence=NAS] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=IMP] [GO:0014909 "smooth
muscle cell migration" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BC102815 IPI:IPI00693899
RefSeq:NP_001070463.1 UniGene:Bt.20293 ProteinModelPortal:Q3SZK1
STRING:Q3SZK1 PRIDE:Q3SZK1 Ensembl:ENSBTAT00000005126 GeneID:767919
KEGG:bta:767919 CTD:14 GeneTree:ENSGT00690000102167
HOGENOM:HOG000261676 HOVERGEN:HBG061307 InParanoid:Q3SZK1
OMA:VWSFEVG OrthoDB:EOG4D26PX NextBio:20918276 ArrayExpress:Q3SZK1
GO:GO:0001525 GO:GO:0045766 GO:GO:0010595 GO:GO:0014909
Uniprot:Q3SZK1
Length = 434
Score = 109 (43.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 435 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 494
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 282 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 336
Query: 495 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 553
G + ++D + L+ + + +V++++ ++ T + D ++RL+D R++ +
Sbjct: 337 LDGTLAIYDLSTQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDY 396
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
GHT I DF S+D ++++ D +++ V
Sbjct: 397 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 429
Score = 103 (41.3 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 55/236 (23%), Positives = 93/236 (39%)
Query: 88 TWSRHSAKVNLLLLFGE-HILSID--IDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
T++ HSA V + L + + L++ D F+W E GH D T
Sbjct: 86 TFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGH---KDSVTCAGF 142
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
H T V G G L++W + TK++++ F+ G P V+ G +DG
Sbjct: 143 SHDSTL---VATGDMSGLLKVWQVDTKEEVWSFEA-GDLEWMEWH-PRAPVLLAGTADGN 197
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ V + TF T DG+ + G G I IW+L++ V++
Sbjct: 198 TWMWKVPTGD-CKTF-QGPNCPATCGRVLPDGKRAVV-GYEDGTIRIWDLKQGNSIHVLK 254
Query: 265 --EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
E H + + + ++++ S D K+ + TT + R + S P L
Sbjct: 255 GTEGHQGPLTCVATNQDGSLILTGSVDCQAKL-VSATTGKVVGVFRPETVASQPSL 309
>UNIPROTKB|Q9UNX4 [details] [associations]
symbol:WDR3 "WD repeat-containing protein 3" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 UniGene:Hs.310809
InterPro:IPR007148 Pfam:PF04003 HOGENOM:HOG000212524 KO:K14556
OMA:SIFAHDD EMBL:AF083217 IPI:IPI00009471 RefSeq:NP_006775.1
ProteinModelPortal:Q9UNX4 SMR:Q9UNX4 IntAct:Q9UNX4
MINT:MINT-1401247 STRING:Q9UNX4 PhosphoSite:Q9UNX4 DMDM:12230773
SWISS-2DPAGE:Q9UNX4 PaxDb:Q9UNX4 PeptideAtlas:Q9UNX4 PRIDE:Q9UNX4
Ensembl:ENST00000349139 GeneID:10885 KEGG:hsa:10885 UCSC:uc010oxe.1
CTD:10885 GeneCards:GC01P118472 HGNC:HGNC:12755 HPA:HPA027509
MIM:604737 neXtProt:NX_Q9UNX4 PharmGKB:PA37359 HOVERGEN:HBG013192
InParanoid:Q9UNX4 OrthoDB:EOG412M4S PhylomeDB:Q9UNX4 ChiTaRS:WDR3
GenomeRNAi:10885 NextBio:41331 ArrayExpress:Q9UNX4 Bgee:Q9UNX4
CleanEx:HS_WDR3 Genevestigator:Q9UNX4 GermOnline:ENSG00000065183
Uniprot:Q9UNX4
Length = 943
Score = 117 (46.2 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 40/185 (21%), Positives = 78/185 (42%)
Query: 165 LWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMR 224
+W++ +K+ +G P +AVG DG I + ++ E VTF + +
Sbjct: 49 IWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTF-NGHK 107
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPVL 283
A+T L + G L ASG+ I +W++ + R + H +AI F + +L
Sbjct: 108 AAITTLKYDQLGGRL-ASGSKDTDIIVWDVINE--SGLYRLKGHKDAITQALFLREKNLL 164
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+++ D +K W DT + GH + + + +++ D R++ +
Sbjct: 165 VTSGKDTMVKWWDLDTQ----HCFKTMVGHRTEVWGLVLLSEEKRLITGASDSELRVWDI 220
Query: 344 IQDQQ 348
Q+
Sbjct: 221 AYLQE 225
Score = 103 (41.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRV 526
S Y H V+ + L+ + ++K+W DF G KS + S++ + +
Sbjct: 586 SLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDF-GDCHKSLFAHDDSVMYLQFVPK 644
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ L T D I+ +D ++ EGH I S G +++SS D SLR+W+
Sbjct: 645 SHLFFTAGKDHKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 91 (37.1 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 48/227 (21%), Positives = 97/227 (42%)
Query: 93 SAKVNLLL--LFGE--HILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S K N++ L GE +++ ++FIW + E+ L G L + T C PD
Sbjct: 21 SQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQG---LKQEVTCLC-PSPD 76
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
+ VG ++GS++++++ + + F G +A G D I V
Sbjct: 77 GL--HLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVW 134
Query: 209 NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
+V + L + A+T F + L+ SG + ++ W+L+ + + H
Sbjct: 135 DVINESGLYRLK-GHKDAITQALFLREKNLLVTSGKDT-MVKWWDLDTQHCFKTM-VGHR 191
Query: 269 NAIISLHFFANEPVLMSASADNSIKMW-------IFDTTDGDPRLLR 308
+ L + E L++ ++D+ +++W I D + DP+ ++
Sbjct: 192 TEVWGLVLLSEEKRLITGASDSELRVWDIAYLQEIEDPEEPDPKKIK 238
Score = 89 (36.4 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 40/201 (19%), Positives = 82/201 (40%)
Query: 448 IERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-- 505
+E ++L + + S + H +V ++ S N ++SA IK+W+
Sbjct: 389 VELYSLNPSLPTPQPVRTSRITIGGHRSDVRTLSFSSDNIAVLSAAADS-IKIWNRSTLQ 447
Query: 506 --RDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDF 563
R + + + CS +V ++ T L +L+D+ + ++ + H +
Sbjct: 448 CIRTMTCEYAL-CSFFVPGDRQV--VIGTKTGKL--QLYDLASGNLLETIDAHDGALWSM 502
Query: 564 CFSEDGKWLLSSGMDGSLRIWDVILAR------------QIDAIHVDVSITALSLSPNMD 611
S D + ++ G D S++ WD L + Q + +D + +S SPN
Sbjct: 503 SLSPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQK 562
Query: 612 VLATAHVDQNGVYLWVNRCMF 632
+LA + +D +V+ F
Sbjct: 563 LLAVSLLDCTVKIFYVDTLKF 583
Score = 88 (36.0 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 44/200 (22%), Positives = 81/200 (40%)
Query: 440 VLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIK 499
V+GT G ++ ++L SG + L+ + AH+G + ++ ++ G +K
Sbjct: 470 VIGTKTGKLQLYDLASG----NLLETID----AHDGALWSMSLSPDQRGFVTGGADKSVK 521
Query: 500 VWDFK-GRDLKS---RWEVGCS--------LVKIVYHRVNGLLATVADDLVIRLFDVVAL 547
WDF+ +D S R V + ++ + Y LLA D +++F V L
Sbjct: 522 FWDFELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTL 581
Query: 548 RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV-DVSITALSL 606
+ GH + S DG + + D +++IW + ++ D S+ L
Sbjct: 582 KFFLSLYGHKLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQF 641
Query: 607 SPNMDVLATAHVDQNGVYLW 626
P + TA D + W
Sbjct: 642 VPKSHLFFTAGKDHK-IKQW 660
Score = 87 (35.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 34/141 (24%), Positives = 63/141 (44%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R V L+FSSD +L++ A S I IWN + LQ + + A+ S + V+
Sbjct: 415 RSDVRTLSFSSDNIAVLSAAADS--IKIWN--RSTLQCIRTMTCEYALCSFFVPGDRQVV 470
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL--F 341
+ K+ ++D G+ LL H + + R ++ G D++ + F
Sbjct: 471 IGTKTG---KLQLYDLASGN--LLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDF 525
Query: 342 SVIQDQQSRELSQRHVAKRAR 362
+++D+ S + +R K+ R
Sbjct: 526 ELVKDENSTQ--KRLSVKQTR 544
Score = 38 (18.4 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 326 GRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRAR 362
GR + G D LF ++ ++ ++ + + K+AR
Sbjct: 291 GRILACHGTDSVLELFCILSKKEIQKKMDKKM-KKAR 326
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 160 (61.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 50/206 (24%), Positives = 93/206 (45%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ +S+ G FA+ G+ G + ++L +G+S ++ H +V+ VA N
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV--------GHTKDVLSVAFSLDN 117
Query: 487 TLMISAGYHGDIKVWDFKGR---DLKSRWEVGCSLVKIVYHRVNGLLATVAD---DLVIR 540
++SA IK+W+ G + E V V N L T+ D ++
Sbjct: 118 RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 600
++++ ++ GHT ++ S DG S G DG + +WD+ +++ ++ +
Sbjct: 178 VWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV 237
Query: 601 ITALSLSPNMDVLATAHVDQNGVYLW 626
I AL SPN L A ++G+ +W
Sbjct: 238 IHALCFSPNRYWLCAA--TEHGIKIW 261
Score = 113 (44.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 58/220 (26%), Positives = 96/220 (43%)
Query: 83 AHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPT 142
A + T H + +L G+ LS DG + +W VGH K D +
Sbjct: 55 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK--DVLSVA 112
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNI--STKKKLYEF-KGWGXXXXXXXXXP-ALDVVAV 198
+ D +++ S++ +++LWN K + E +G P L V
Sbjct: 113 FSL--DN--RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 168
Query: 199 GCS-DGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL-E 255
S D + V N+ + T H+ G V+ +A S DG L ASG GV+ +W+L E
Sbjct: 169 SASWDKTVKVWNLSNCKLRSTLAGHT--GYVSTVAVSPDGS-LCASGGKDGVVLLWDLAE 225
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
++L S+ EA N++I F+ + A+ ++ IK+W
Sbjct: 226 GKKLYSL--EA--NSVIHALCFSPNRYWLCAATEHGIKIW 261
Score = 100 (40.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 34/124 (27%), Positives = 59/124 (47%)
Query: 484 STNTL---MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLATVADDLVI 539
S NTL ++SA + +KVW+ L+S V V +G L A+ D V+
Sbjct: 159 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 218
Query: 540 RLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDV 599
L+D+ + + E ++ I CFS + WL ++ G ++IWD+ ++ + VD+
Sbjct: 219 LLWDLAEGKKLYSLEANSV-IHALCFSPNRYWLCAATEHG-IKIWDLESKSIVEDLKVDL 276
Query: 600 SITA 603
A
Sbjct: 277 KAEA 280
Score = 98 (39.6 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKR-RLQSVIRE---AHDNAIISLHFFANEPV 282
VTA+A D ++ S + I +W L K + V + H + + + ++
Sbjct: 18 VTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQF 77
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+S S D +++W D G RF GH+ L + F + R I+SA +DR +L++
Sbjct: 78 ALSGSWDGELRLW--DLAAG-VSTRRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
Query: 343 VI 344
+
Sbjct: 134 TL 135
Score = 53 (23.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 561 TDFCFSEDGKWLLSSGMDGSLRIWDV 586
T +S DG L S DG +R+W +
Sbjct: 299 TSLNWSADGSTLFSGYTDGVIRVWGI 324
>RGD|620477 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10116 "Rattus
norvegicus" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005680 "anaphase-promoting
complex" evidence=IEA;ISO;ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008284
"positive regulation of cell proliferation" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019899
"enzyme binding" evidence=IEA;ISO] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0031915 "positive regulation of
synaptic plasticity" evidence=IEA;ISO;ISS] [GO:0040020 "regulation
of meiosis" evidence=IEA;ISO] [GO:0043234 "protein complex"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050773 "regulation of dendrite development"
evidence=IMP] [GO:0051301 "cell division" evidence=IEA] [GO:0051488
"activation of anaphase-promoting complex activity"
evidence=IEA;ISO;ISS] [GO:0090129 "positive regulation of synapse
maturation" evidence=IEA;ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 UniPathway:UPA00143 RGD:620477
GO:GO:0005813 GO:GO:0048471 GO:GO:0043234 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319 GO:GO:0016567
GO:GO:0005680 GO:GO:0050773 GO:GO:0000922 GO:GO:0031145
GO:GO:0090129 GO:GO:0031915 GO:GO:0040020 GO:GO:0051488 KO:K03363
CTD:991 HOGENOM:HOG000195514 HOVERGEN:HBG001024 OrthoDB:EOG4CC414
EMBL:U05341 EMBL:AF052695 EMBL:BC085691 IPI:IPI00382084 PIR:B56021
RefSeq:NP_741990.1 UniGene:Rn.9262 ProteinModelPortal:Q62623
IntAct:Q62623 STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623
GeneID:64515 KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623
NextBio:613310 ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 120 (47.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 36/162 (22%), Positives = 71/162 (43%)
Query: 91 RHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTY 150
R+ +NL+ ++L++ +D ++++W G + L + + D + + Y
Sbjct: 182 RNDYYLNLVDWSSGNVLAVALDNSVYLWN-AGSGDILQLLQMEQPGDYISSVAWIKEGNY 240
Query: 151 LNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV 210
L VG+ +QLW++ +K+L +++ G G IH H+V
Sbjct: 241 L---AVGTSNAEVQLWDVQQQKRLRNMTSHSARVSSLSWNSY--ILSSGSRSGHIHHHDV 295
Query: 211 RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
R E V V L ++ DG+ L ASG + ++++W
Sbjct: 296 RVAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNIVNVW 336
Score = 97 (39.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 194 DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIW 252
+V+AV D +++ N + L G ++++A+ +G LA G S+ + +W
Sbjct: 196 NVLAVAL-DNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGN-YLAVGTSNAEVQLW 253
Query: 253 NLEK-RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 311
++++ +RL+++ +H + SL + N +L S S I D + + S
Sbjct: 254 DVQQQKRLRNMT--SHSARVSSLSW--NSYILSSGSRSGHIHH--HDVRVAEHHVATL-S 306
Query: 312 GHSAPPLCIRFYANGRHILSAGQD 335
GHS +R+ +GRH+ S G D
Sbjct: 307 GHSQEVCGLRWAPDGRHLASGGND 330
Score = 93 (37.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 473 HNGEVVGVA-CDSTNTLMISAGYHGD--IKVWDFKGRDLKSRWEVG---CSLVKIVYHR- 525
H G V VA C + ++ + G D I++W+ S +V CS++ +++
Sbjct: 354 HQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKE 413
Query: 526 -VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
++G + LVI + +A V + +GHT R+ S DG + S+ D +LR+W
Sbjct: 414 LISGH-GFAQNQLVIWKYPTMA--KVAELKGHTARVLSLTMSPDGATVASAAADETLRLW 470
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 527 NGLLATVA--DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS-GM-DGSLR 582
+ +LAT D IR+++V + + + H+ ++ +S K L+S G L
Sbjct: 368 SNILATGGGTSDRHIRIWNVCSGACLSAVDVHS-QVCSILWSPHYKELISGHGFAQNQLV 426
Query: 583 IWDV-ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRC 630
IW +A+ + + +L++SP+ +A+A D+ + LW RC
Sbjct: 427 IWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADET-LRLW--RC 472
>UNIPROTKB|Q62623 [details] [associations]
symbol:Cdc20 "Cell division cycle protein 20 homolog"
species:10116 "Rattus norvegicus" [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0040020 "regulation of meiosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 RGD:620477 GO:GO:0005813 GO:GO:0048471
GO:GO:0043234 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284
eggNOG:COG2319 GO:GO:0016567 GO:GO:0005680 GO:GO:0050773
GO:GO:0000922 GO:GO:0031145 GO:GO:0090129 GO:GO:0031915
GO:GO:0040020 GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OrthoDB:EOG4CC414 EMBL:U05341 EMBL:AF052695
EMBL:BC085691 IPI:IPI00382084 PIR:B56021 RefSeq:NP_741990.1
UniGene:Rn.9262 ProteinModelPortal:Q62623 IntAct:Q62623
STRING:Q62623 PhosphoSite:Q62623 PRIDE:Q62623 GeneID:64515
KEGG:rno:64515 UCSC:RGD:620477 InParanoid:Q62623 NextBio:613310
ArrayExpress:Q62623 Genevestigator:Q62623
GermOnline:ENSRNOG00000028415 Uniprot:Q62623
Length = 499
Score = 120 (47.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 36/162 (22%), Positives = 71/162 (43%)
Query: 91 RHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTY 150
R+ +NL+ ++L++ +D ++++W G + L + + D + + Y
Sbjct: 182 RNDYYLNLVDWSSGNVLAVALDNSVYLWN-AGSGDILQLLQMEQPGDYISSVAWIKEGNY 240
Query: 151 LNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV 210
L VG+ +QLW++ +K+L +++ G G IH H+V
Sbjct: 241 L---AVGTSNAEVQLWDVQQQKRLRNMTSHSARVSSLSWNSY--ILSSGSRSGHIHHHDV 295
Query: 211 RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
R E V V L ++ DG+ L ASG + ++++W
Sbjct: 296 RVAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNIVNVW 336
Score = 97 (39.2 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 194 DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIW 252
+V+AV D +++ N + L G ++++A+ +G LA G S+ + +W
Sbjct: 196 NVLAVAL-DNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGN-YLAVGTSNAEVQLW 253
Query: 253 NLEK-RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 311
++++ +RL+++ +H + SL + N +L S S I D + + S
Sbjct: 254 DVQQQKRLRNMT--SHSARVSSLSW--NSYILSSGSRSGHIHH--HDVRVAEHHVATL-S 306
Query: 312 GHSAPPLCIRFYANGRHILSAGQD 335
GHS +R+ +GRH+ S G D
Sbjct: 307 GHSQEVCGLRWAPDGRHLASGGND 330
Score = 93 (37.8 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 473 HNGEVVGVA-CDSTNTLMISAGYHGD--IKVWDFKGRDLKSRWEVG---CSLVKIVYHR- 525
H G V VA C + ++ + G D I++W+ S +V CS++ +++
Sbjct: 354 HQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKE 413
Query: 526 -VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
++G + LVI + +A V + +GHT R+ S DG + S+ D +LR+W
Sbjct: 414 LISGH-GFAQNQLVIWKYPTMA--KVAELKGHTARVLSLTMSPDGATVASAAADETLRLW 470
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 27/109 (24%), Positives = 52/109 (47%)
Query: 527 NGLLATVA--DDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS-GM-DGSLR 582
+ +LAT D IR+++V + + + H+ ++ +S K L+S G L
Sbjct: 368 SNILATGGGTSDRHIRIWNVCSGACLSAVDVHS-QVCSILWSPHYKELISGHGFAQNQLV 426
Query: 583 IWDV-ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRC 630
IW +A+ + + +L++SP+ +A+A D+ + LW RC
Sbjct: 427 IWKYPTMAKVAELKGHTARVLSLTMSPDGATVASAAADET-LRLW--RC 472
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 118 (46.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 41/152 (26%), Positives = 67/152 (44%)
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ +H + + T + D RL+DV VR F GHT +T + DG + S+ +G
Sbjct: 469 VTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGL 528
Query: 581 LRIWDVILARQIDAIHVDV-SITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 639
+ +WD+ R+I + +I +LS S VL + D V W +F +N +
Sbjct: 529 IHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCT-VRAWD---VFK--TNYN 582
Query: 640 SYASGKEIVSVKMPSVSSVEGCQDEN-SSQPD 670
+ S SV P + + N S+ PD
Sbjct: 583 NPVSSSLTGSVVTPFSAKTSTFNEVNWSTSPD 614
Score = 98 (39.6 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 32/131 (24%), Positives = 58/131 (44%)
Query: 213 DEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
D + +HS G V FS D + LL+ + +W+++ + V + H +
Sbjct: 370 DGSVRLLSHS--GPVYGTTFSPDNKYLLSCSEDASA-RLWSVDTKTAL-VAYKGHTGPVW 425
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
+ F +AS D + ++W D P LR +GH + C+ F+ N ++L+
Sbjct: 426 DVAFGPFGHYFATASHDQTAQLWSCDHIY--P--LRVFAGHLSDVDCVTFHPNSAYVLTG 481
Query: 333 GQDRAFRLFSV 343
D+ RL+ V
Sbjct: 482 SSDKTCRLWDV 492
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 105
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 106 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 154
Score = 119 (46.9 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 29 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 83
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 84 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 141
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 142 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 197
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 198 VATKECKAELREHEHVVE 215
Score = 89 (36.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 217 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 274
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 275 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 334
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 335 VDQTVKVWE 343
Score = 48 (22.0 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 243 GPFLLSGSRDKTIKMWDV 260
>UNIPROTKB|G4MXN3 [details] [associations]
symbol:MGG_01259 "Pre-mRNA splicing factor" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 KO:K12662 RefSeq:XP_003714171.1
ProteinModelPortal:G4MXN3 EnsemblFungi:MGG_01259T0 GeneID:2679643
KEGG:mgr:MGG_01259 Uniprot:G4MXN3
Length = 531
Score = 130 (50.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 38/155 (24%), Positives = 77/155 (49%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
+A G ++G++++ ++ D L T + H+ R V + F G+ LAS + +W++
Sbjct: 274 LATGGAEGQVNLWSLSQDTPLATLSGHTQR--VCRVDFHPSGR-FLASASEDTSWRLWDV 330
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
EKR + +++E H + ++ F + +L SA D+ ++W T L GH
Sbjct: 331 EKRT-ELLLQEGHSRGVFAVSFNGDGSLLASAGQDSIGRIWDLRTGRTIMILDGHMDGHI 389
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQS 349
P + + ++G +LSA D + + V + Q++
Sbjct: 390 KPIYALDWGSDGHRVLSASADGWIKCWDVRKVQRT 424
Score = 127 (49.8 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 49/201 (24%), Positives = 84/201 (41%)
Query: 103 GEHILSIDIDGNMFIWAFKGIEENLAPVGHV-KLDDK--FTPTCIMHPDTYLNKV--IVG 157
GE + + + G + +++ ++E + GH K+ F + + V G
Sbjct: 218 GETVATGNWGGQVKLFSIPNLDETMNLRGHTNKVSGMCWFPGATLQESNVSAESVNLATG 277
Query: 158 SQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV 217
EG + LW++S L G P+ +A D + +V EL+
Sbjct: 278 GAEGQVNLWSLSQDTPLATLSGHTQRVCRVDFHPSGRFLASASEDTSWRLWDVEKRTELL 337
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI---REAHDNAIISL 274
RG V A++F+ DG LLAS + IW+L R ++ + H I +L
Sbjct: 338 LQEGHSRG-VFAVSFNGDGS-LLASAGQDSIGRIWDLRTGRTIMILDGHMDGHIKPIYAL 395
Query: 275 HFFANEPVLMSASADNSIKMW 295
+ ++ ++SASAD IK W
Sbjct: 396 DWGSDGHRVLSASADGWIKCW 416
Score = 83 (34.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 536 DLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
D + ++ +V+ GHT + S DG+W++S G D ++++W
Sbjct: 475 DHKVNIYSADDWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 72 (30.4 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
L+S+ D+ + ++ D D L++ SGH+ P + +GR I+S G DR +L+
Sbjct: 469 LVSSGFDHKVNIYSAD----DWALVQSLSGHTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVW 501
H G V V ++S G+ +K+W
Sbjct: 495 HTGPVASVDVSRDGRWIVSGGHDRTVKLW 523
Score = 37 (18.1 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 567 EDGKWLLSSGMDGSLRIW 584
+ G +L+SSG D + I+
Sbjct: 464 KSGTFLVSSGFDHKVNIY 481
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 162 (62.1 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 49/195 (25%), Positives = 95/195 (48%)
Query: 150 YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHN 209
Y +K+ GS + + +LW++ T K + F+G P +VA G D + +
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 210 VRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK-RRLQSVIREAH 267
++ EE+ T T HS + +L+F++ G ++ +G+ +++W + R++ ++I H
Sbjct: 206 IQSGEEVFTLTGHSAE--IISLSFNTSGNRII-TGSFDHTVTVWEADTGRKVYTLI--GH 260
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGR 327
I S F + ++++ S D + K+W D +G + + +GH L F G+
Sbjct: 261 CAEISSAVFNWDCSLILTGSMDKTCKLW--DAVNG--KCVATLTGHDDEILDSCFDYTGK 316
Query: 328 HILSAGQDRAFRLFS 342
I +A D R+FS
Sbjct: 317 LIATASADGTARIFS 331
Score = 139 (54.0 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 54/268 (20%), Positives = 108/268 (40%)
Query: 31 TVSVGKAFHIYNCAKLNLVLVGPQLPKKIRALASYRDYTFAAYGNHIAVVKRAHQVATWS 90
+V GK +H + +V + P+ D T + ++ +V T +
Sbjct: 163 SVETGKCYHTFRGHTAEIVCLSFN-PQSTLVATGSMDTTAKLWD-----IQSGEEVFTLT 216
Query: 91 RHSAKVNLLLLF---GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHP 147
HSA++ + L F G I++ D + +W + +GH + + +
Sbjct: 217 GHSAEI-ISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAE----ISSAVFNW 271
Query: 148 DTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHV 207
D L ++ GS + + +LW+ K + G ++A +DG +
Sbjct: 272 DCSL--ILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARI 329
Query: 208 HNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAH 267
+ E VT G ++ ++F+ G LL +G+S IW+ + + V+ E H
Sbjct: 330 FSAA-TRECVTKLEGHEGEISKISFNPQGNRLL-TGSSDKTARIWDAQTGQCLQVL-EGH 386
Query: 268 DNAIISLHFFANEPVLMSASADNSIKMW 295
+ I S F ++++ S DN+ ++W
Sbjct: 387 TDEIFSCAFNYKGDIIITGSKDNTCRIW 414
Score = 132 (51.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 52/238 (21%), Positives = 96/238 (40%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
V T MDT A +W +Q+ GE + + + + + + GN + G+ + +
Sbjct: 192 VATGSMDTT-AKLWDIQS---GEEVFTLTGHSAEII-SLSFNTSGNRIITGSFDHTVTVW 246
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWD-FKGRDLKS 510
+G R Y + H E+ + +L+++ K+WD G+ + +
Sbjct: 247 EADTG--RKVY------TLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVAT 298
Query: 511 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
++ + L+AT + D R+F V K EGH I+ F+ G
Sbjct: 299 LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGN 358
Query: 571 WLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
LL+ D + RIWD + + + H D I + + + D++ T D N +W
Sbjct: 359 RLLTGSSDKTARIWDAQTGQCLQVLEGHTD-EIFSCAFNYKGDIIITGSKD-NTCRIW 414
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 120 (47.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 43/151 (28%), Positives = 69/151 (45%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+A G D + + ++ + L T S + V +A+S D + AS +G I IWN +
Sbjct: 120 LASGSGDQTMRIWDIELELPLHT-CKSHKSWVLCIAWSPDATKI-ASACKNGEICIWNAK 177
Query: 256 KRRLQSVIREAHDNAIISLHF--FANEP---VLMSASADNSIKMWIFDTTDGDPRLLRFR 310
+ H I SL + +P +L S D +I +W DT G ++R
Sbjct: 178 TGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIW--DTVQGT--VVRCL 233
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
SGH+A C+R+ G I S QDR +++
Sbjct: 234 SGHTASVTCLRWGGEGL-IYSGSQDRTVKMW 263
Score = 117 (46.2 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 40/162 (24%), Positives = 73/162 (45%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + ++++W+I + L+ K P +A C +G+I + N + E++
Sbjct: 123 GSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQI 182
Query: 217 VTFTHSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ +T+LA+ P LLAS G I IW+ + + + H ++
Sbjct: 183 GKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCL-SGHTASVT 241
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
L + E ++ S S D ++KMW D DG + R +GH+
Sbjct: 242 CLRW-GGEGLIYSGSQDRTVKMWRAD--DGV--MCRNMTGHA 278
Score = 92 (37.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 28/112 (25%), Positives = 56/112 (50%)
Query: 476 EVVGVACDSTNTLMI-SAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLAT 532
++V S +T I SA + +K+W + G+ L S R VG + ++ + + LL +
Sbjct: 361 QLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVG-PVYQVAWSADSRLLVS 419
Query: 533 VADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
+ D +++F++ + GH D + +S +G ++S G D L++W
Sbjct: 420 GSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 68 (29.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 530 LATVADDLVIRLFDVVALRM-VRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
L + +DD + +++ + + + GH + FS D +++ S+ D S+++W
Sbjct: 332 LVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLW 387
Score = 56 (24.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 12/67 (17%), Positives = 33/67 (49%)
Query: 520 KIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
++V+ +A+ + D ++L+ + + GH + +S D + L+S D
Sbjct: 365 QVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRLLVSGSADS 424
Query: 580 SLRIWDV 586
+L+++++
Sbjct: 425 TLKVFEL 431
Score = 49 (22.3 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL 508
H G V VA + + L++S +KV++ K + L
Sbjct: 401 HVGPVYQVAWSADSRLLVSGSADSTLKVFELKTKSL 436
Score = 48 (22.0 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 433 SACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISA 492
SA V G+A ++ F L++ + Y D+ H EV V T ++S
Sbjct: 411 SADSRLLVSGSADSTLKVFELKT---KSLYYDLP-----GHGDEVFTVDWSPEGTKVVSG 462
Query: 493 GYHGDIKVW 501
G +K+W
Sbjct: 463 GKDKVLKLW 471
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 172 (65.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 487 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 543
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 152 (58.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 53/196 (27%), Positives = 84/196 (42%)
Query: 119 AFKGIEENLAPVG---HVKLDDKFTPTCI-MHPD-TYLNKVIVGSQEGSLQLWNISTKKK 173
A K +EE P H+K K C PD YL + GS +G +++WN +T K
Sbjct: 192 AVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYL---VTGSVDGFIEVWNFTTGKI 248
Query: 174 LYEFKGWGXXXXXXXXXPAL--------DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
+ K L +++A G DGKI V ++ + L F +
Sbjct: 249 RKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSK 308
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
VT L+FS D +L S + I I L+ + R H + + F + ++S
Sbjct: 309 GVTCLSFSKDSSQIL-SASFDQTIRIHGLKSGKTLKEFR-GHSSFVNEATFTQDGHYIIS 366
Query: 286 ASADNSIKMWIFDTTD 301
AS+D ++K+W TT+
Sbjct: 367 ASSDGTVKIWNMKTTE 382
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 55/264 (20%), Positives = 107/264 (40%)
Query: 103 GEHILSIDIDGNMFIWAFK-G-IEENL---APVGHVKLDDKFTPTCIMHPDTYLNKVIVG 157
G+++++ +DG + +W F G I ++L A + +DD C DT + + G
Sbjct: 226 GQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR-DTEM--LATG 282
Query: 158 SQEGSLQLWNISTKKKLYEF-KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
+Q+G +++W I + + L F + + D I +H ++ + L
Sbjct: 283 AQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTL 342
Query: 217 VTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
F HS V F+ DG ++ S +S G + IWN++ + + A
Sbjct: 343 KEFRGHS--SFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECSNTFKSLGSTA--GTD 397
Query: 276 FFANEPVLMSASADNSIKMWIFDTT---DGDPRLLR-FRSG--HSAPPLCIRFYANGRHI 329
N +L+ + ++ + +T + +++R F SG +C G I
Sbjct: 398 ITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWI 457
Query: 330 LSAGQDRAFRLFSVIQDQQSRELS 353
G+D FS + + R L+
Sbjct: 458 YCVGEDFVLYCFSTVTGKLERTLT 481
Score = 129 (50.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 279
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 339
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 340 LFSVIQDQQSRE 351
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 476
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 477 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 536
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 537 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 688 KQQIPDLVTLSLLPKSQWQSLINLDII 714
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 172 (65.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 487 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 543
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 152 (58.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 53/196 (27%), Positives = 84/196 (42%)
Query: 119 AFKGIEENLAPVG---HVKLDDKFTPTCI-MHPD-TYLNKVIVGSQEGSLQLWNISTKKK 173
A K +EE P H+K K C PD YL + GS +G +++WN +T K
Sbjct: 192 AVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYL---VTGSVDGFIEVWNFTTGKI 248
Query: 174 LYEFKGWGXXXXXXXXXPAL--------DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
+ K L +++A G DGKI V ++ + L F +
Sbjct: 249 RKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSK 308
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
VT L+FS D +L S + I I L+ + R H + + F + ++S
Sbjct: 309 GVTCLSFSKDSSQIL-SASFDQTIRIHGLKSGKTLKEFR-GHSSFVNEATFTQDGHYIIS 366
Query: 286 ASADNSIKMWIFDTTD 301
AS+D ++K+W TT+
Sbjct: 367 ASSDGTVKIWNMKTTE 382
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 55/264 (20%), Positives = 107/264 (40%)
Query: 103 GEHILSIDIDGNMFIWAFK-G-IEENL---APVGHVKLDDKFTPTCIMHPDTYLNKVIVG 157
G+++++ +DG + +W F G I ++L A + +DD C DT + + G
Sbjct: 226 GQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR-DTEM--LATG 282
Query: 158 SQEGSLQLWNISTKKKLYEF-KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
+Q+G +++W I + + L F + + D I +H ++ + L
Sbjct: 283 AQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTL 342
Query: 217 VTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
F HS V F+ DG ++ S +S G + IWN++ + + A
Sbjct: 343 KEFRGHS--SFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECSNTFKSLGSTA--GTD 397
Query: 276 FFANEPVLMSASADNSIKMWIFDTT---DGDPRLLR-FRSG--HSAPPLCIRFYANGRHI 329
N +L+ + ++ + +T + +++R F SG +C G I
Sbjct: 398 ITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWI 457
Query: 330 LSAGQDRAFRLFSVIQDQQSRELS 353
G+D FS + + R L+
Sbjct: 458 YCVGEDFVLYCFSTVTGKLERTLT 481
Score = 129 (50.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 279
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 339
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 340 LFSVIQDQQSRE 351
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 476
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 477 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 536
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 537 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 688 KQQIPDLVTLSLLPKSQWQSLINLDII 714
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 172 (65.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 487 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 543
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 152 (58.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 53/196 (27%), Positives = 84/196 (42%)
Query: 119 AFKGIEENLAPVG---HVKLDDKFTPTCI-MHPD-TYLNKVIVGSQEGSLQLWNISTKKK 173
A K +EE P H+K K C PD YL + GS +G +++WN +T K
Sbjct: 192 AVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYL---VTGSVDGFIEVWNFTTGKI 248
Query: 174 LYEFKGWGXXXXXXXXXPAL--------DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
+ K L +++A G DGKI V ++ + L F +
Sbjct: 249 RKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSK 308
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
VT L+FS D +L S + I I L+ + R H + + F + ++S
Sbjct: 309 GVTCLSFSKDSSQIL-SASFDQTIRIHGLKSGKTLKEFR-GHSSFVNEATFTQDGHYIIS 366
Query: 286 ASADNSIKMWIFDTTD 301
AS+D ++K+W TT+
Sbjct: 367 ASSDGTVKIWNMKTTE 382
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 55/264 (20%), Positives = 107/264 (40%)
Query: 103 GEHILSIDIDGNMFIWAFK-G-IEENL---APVGHVKLDDKFTPTCIMHPDTYLNKVIVG 157
G+++++ +DG + +W F G I ++L A + +DD C DT + + G
Sbjct: 226 GQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR-DTEM--LATG 282
Query: 158 SQEGSLQLWNISTKKKLYEF-KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
+Q+G +++W I + + L F + + D I +H ++ + L
Sbjct: 283 AQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTL 342
Query: 217 VTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
F HS V F+ DG ++ S +S G + IWN++ + + A
Sbjct: 343 KEFRGHS--SFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECSNTFKSLGSTA--GTD 397
Query: 276 FFANEPVLMSASADNSIKMWIFDTT---DGDPRLLR-FRSG--HSAPPLCIRFYANGRHI 329
N +L+ + ++ + +T + +++R F SG +C G I
Sbjct: 398 ITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWI 457
Query: 330 LSAGQDRAFRLFSVIQDQQSRELS 353
G+D FS + + R L+
Sbjct: 458 YCVGEDFVLYCFSTVTGKLERTLT 481
Score = 129 (50.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 279
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 339
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 340 LFSVIQDQQSRE 351
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 476
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 477 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 536
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 537 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 688 KQQIPDLVTLSLLPKSQWQSLINLDII 714
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 172 (65.6 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 41/163 (25%), Positives = 84/163 (51%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ S G + V G+ G+IE +N +G R L + N+ + V C S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 487 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 543
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHG 335
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ + + +++F GH+ + + F++DG +++S+ DG+++IW++
Sbjct: 336 LKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKIWNM 378
Score = 152 (58.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 53/196 (27%), Positives = 84/196 (42%)
Query: 119 AFKGIEENLAPVG---HVKLDDKFTPTCI-MHPD-TYLNKVIVGSQEGSLQLWNISTKKK 173
A K +EE P H+K K C PD YL + GS +G +++WN +T K
Sbjct: 192 AVKDVEEEKFPTQLSRHIKFGQKSHVECARFSPDGQYL---VTGSVDGFIEVWNFTTGKI 248
Query: 174 LYEFKGWGXXXXXXXXXPAL--------DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
+ K L +++A G DGKI V ++ + L F +
Sbjct: 249 RKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSK 308
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
VT L+FS D +L S + I I L+ + R H + + F + ++S
Sbjct: 309 GVTCLSFSKDSSQIL-SASFDQTIRIHGLKSGKTLKEFR-GHSSFVNEATFTQDGHYIIS 366
Query: 286 ASADNSIKMWIFDTTD 301
AS+D ++K+W TT+
Sbjct: 367 ASSDGTVKIWNMKTTE 382
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 55/264 (20%), Positives = 107/264 (40%)
Query: 103 GEHILSIDIDGNMFIWAFK-G-IEENL---APVGHVKLDDKFTPTCIMHPDTYLNKVIVG 157
G+++++ +DG + +W F G I ++L A + +DD C DT + + G
Sbjct: 226 GQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR-DTEM--LATG 282
Query: 158 SQEGSLQLWNISTKKKLYEF-KGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
+Q+G +++W I + + L F + + D I +H ++ + L
Sbjct: 283 AQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIHGLKSGKTL 342
Query: 217 VTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
F HS V F+ DG ++ S +S G + IWN++ + + A
Sbjct: 343 KEFRGHS--SFVNEATFTQDGHYII-SASSDGTVKIWNMKTTECSNTFKSLGSTA--GTD 397
Query: 276 FFANEPVLMSASADNSIKMWIFDTT---DGDPRLLR-FRSG--HSAPPLCIRFYANGRHI 329
N +L+ + ++ + +T + +++R F SG +C G I
Sbjct: 398 ITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWI 457
Query: 330 LSAGQDRAFRLFSVIQDQQSRELS 353
G+D FS + + R L+
Sbjct: 458 YCVGEDFVLYCFSTVTGKLERTLT 481
Score = 129 (50.5 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 37/132 (28%), Positives = 62/132 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDN------AIISLHFFAN 279
V FS DGQ L +G+ G I +WN +++ ++ +A DN A++ + F +
Sbjct: 217 VECARFSPDGQ-YLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSRD 275
Query: 280 EPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFR 339
+L + + D IK+W + G L RF HS C+ F + ILSA D+ R
Sbjct: 276 TEMLATGAQDGKIKVWKIQS--GQC-LRRFERAHSKGVTCLSFSKDSSQILSASFDQTIR 332
Query: 340 LFSVIQDQQSRE 351
+ + + +E
Sbjct: 333 IHGLKSGKTLKE 344
Score = 52 (23.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/168 (19%), Positives = 66/168 (39%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQS----------GISRGSYLDMSERSNYAHNGE 476
V T + G++ + ++ G ++ +N+++ G + G+ + ++ N E
Sbjct: 352 VNEATFTQDGHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPE 411
Query: 477 VVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADD 536
V C+ +NT++I G I V F + V C+L R + V +D
Sbjct: 412 HF-VVCNRSNTVVIM-NMQGQI-VRSFSSGKREGGDFVCCALSP----RGEWIYC-VGED 463
Query: 537 LVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
V+ F V ++ R H + + + DG L++W
Sbjct: 464 FVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLW 511
Score = 38 (18.4 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 688 KQQIPDLVTLSLLPKSQWQSLINLDII 714
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCALSPRGEWIYCVGEDFV 465
>UNIPROTKB|Q13685 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0014909 "smooth muscle cell
migration" evidence=IEP] [GO:0010595 "positive regulation of
endothelial cell migration" evidence=ISS] [GO:0009986 "cell
surface" evidence=IDA] [GO:0001525 "angiogenesis" evidence=NAS]
[GO:0008201 "heparin binding" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005737
GO:GO:0009986 GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0008201
CTD:14 HOGENOM:HOG000261676 HOVERGEN:HBG061307 OrthoDB:EOG4D26PX
GO:GO:0001525 GO:GO:0010595 GO:GO:0014909 EMBL:M95627 EMBL:CR456755
EMBL:BC008809 EMBL:BC020244 EMBL:BC039866 IPI:IPI00014481
PIR:I39383 RefSeq:NP_001078.2 UniGene:Hs.83347
ProteinModelPortal:Q13685 SMR:Q13685 IntAct:Q13685
MINT:MINT-1418005 STRING:Q13685 PhosphoSite:Q13685 DMDM:62906874
PaxDb:Q13685 PRIDE:Q13685 Ensembl:ENST00000248450 GeneID:14
KEGG:hsa:14 UCSC:uc002vhk.3 GeneCards:GC02M219092 HGNC:HGNC:18
HPA:CAB017717 MIM:603488 neXtProt:NX_Q13685 PharmGKB:PA24365
InParanoid:Q13685 ChiTaRS:AAMP GenomeRNAi:14 NextBio:31
ArrayExpress:Q13685 Bgee:Q13685 CleanEx:HS_AAMP
Genevestigator:Q13685 GermOnline:ENSG00000127837 Uniprot:Q13685
Length = 434
Score = 108 (43.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 435 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 494
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 282 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 336
Query: 495 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 553
G + ++D + L+ + + +V++++ ++ T + D ++RL+D R++ +
Sbjct: 337 LDGTLAIYDLATQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDY 396
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
GHT I DF S+D ++++ D +++ V
Sbjct: 397 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 429
Score = 103 (41.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 55/236 (23%), Positives = 94/236 (39%)
Query: 88 TWSRHSAKVNLLLLFGE-HILSID--IDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
T++ HSA V + L + + L++ D F+W E GH D T
Sbjct: 86 TFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGH---KDSVTCAGF 142
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
H T V G G L++W + TK++++ F+ G P V+ G +DG
Sbjct: 143 SHDSTL---VATGDMSGLLKVWQVDTKEEVWSFEA-GDLEWMEWH-PRAPVLLAGTADGN 197
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ V + + TF T DG+ + G G I IW+L++ V++
Sbjct: 198 TWMWKVP-NGDCKTF-QGPNCPATCGRVLPDGKRAVV-GYEDGTIRIWDLKQGSPIHVLK 254
Query: 265 --EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
E H + + + ++++ S D K+ + TT + R + S P L
Sbjct: 255 GTEGHQGPLTCVAANQDGSLILTGSVDCQAKL-VSATTGKVVGVFRPETVASQPSL 309
>UNIPROTKB|Q5RCG7 [details] [associations]
symbol:AAMP "Angio-associated migratory cell protein"
species:9601 "Pongo abelii" [GO:0009986 "cell surface"
evidence=ISS] [GO:0010595 "positive regulation of endothelial cell
migration" evidence=ISS] [GO:0014909 "smooth muscle cell migration"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005886 GO:GO:0005737 GO:GO:0009986
GO:GO:0030154 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 CTD:14 GeneTree:ENSGT00690000102167
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX GO:GO:0001525 GO:GO:0010595
GO:GO:0014909 EMBL:CR858303 EMBL:CR859206 RefSeq:NP_001125288.1
UniGene:Pab.19266 ProteinModelPortal:Q5RCG7
Ensembl:ENSPPYT00000015307 GeneID:100172186 KEGG:pon:100172186
InParanoid:Q5RCG7 Uniprot:Q5RCG7
Length = 434
Score = 108 (43.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 37/153 (24%), Positives = 75/153 (49%)
Query: 435 CGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGY 494
C V T G + F ++ S+ S L E S +++ E +G C S L + GY
Sbjct: 282 CQAKLVSATTGKVVGVFRPETVASQPS-LGEGEESE-SNSVESLGF-C-SVMPLA-AVGY 336
Query: 495 -HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKF 553
G + ++D + L+ + + +V++++ ++ T + D ++RL+D R++ +
Sbjct: 337 LDGTLAIYDLATQTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGIVRLWDARTGRLLTDY 396
Query: 554 EGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
GHT I DF S+D ++++ D +++ V
Sbjct: 397 RGHTAEILDFALSKDASLVVTTSGDHKAKVFCV 429
Score = 103 (41.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 55/236 (23%), Positives = 94/236 (39%)
Query: 88 TWSRHSAKVNLLLLFGE-HILSID--IDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCI 144
T++ HSA V + L + + L++ D F+W E GH D T
Sbjct: 86 TFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLSDGELLFECAGH---KDSVTCAGF 142
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
H T V G G L++W + TK++++ F+ G P V+ G +DG
Sbjct: 143 SHDSTL---VATGDMSGLLKVWQVDTKEEVWSFEA-GDLEWMEWH-PRAPVLLAGTADGN 197
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ V + + TF T DG+ + G G I IW+L++ V++
Sbjct: 198 TWMWKVP-NGDCKTF-QGPNCPATCGRVLPDGKRAVV-GYEDGTIRIWDLKQGSPIHVLK 254
Query: 265 --EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
E H + + + ++++ S D K+ + TT + R + S P L
Sbjct: 255 GTEGHQGPLTCVATNQDGSLILTGSVDCQAKL-VSATTGKVVGVFRPETVASQPSL 309
>MGI|MGI:1859866 [details] [associations]
symbol:Cdc20 "cell division cycle 20" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008284 "positive regulation
of cell proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031915 "positive regulation of synaptic plasticity"
evidence=IDA] [GO:0040020 "regulation of meiosis" evidence=IGI]
[GO:0043234 "protein complex" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050773
"regulation of dendrite development" evidence=ISO] [GO:0051301
"cell division" evidence=IEA] [GO:0051488 "activation of
anaphase-promoting complex activity" evidence=ISO] [GO:0090129
"positive regulation of synapse maturation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:1859866 GO:GO:0005813 GO:GO:0048471
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0016567 GO:GO:0005680 GO:GO:0050773 GO:GO:0000922
GO:GO:0031145 GO:GO:0090129 GO:GO:0031915 GO:GO:0040020
GO:GO:0051488 KO:K03363 CTD:991 HOGENOM:HOG000195514
HOVERGEN:HBG001024 OMA:RTPGKSN OrthoDB:EOG4CC414 EMBL:AB045313
EMBL:AF312208 EMBL:AK075998 EMBL:AK076030 EMBL:AK083459
EMBL:AK168650 EMBL:BC003215 IPI:IPI00320406 RefSeq:NP_075712.2
UniGene:Mm.289747 ProteinModelPortal:Q9JJ66 SMR:Q9JJ66
IntAct:Q9JJ66 MINT:MINT-2834618 STRING:Q9JJ66 PhosphoSite:Q9JJ66
PRIDE:Q9JJ66 DNASU:107995 Ensembl:ENSMUST00000006565 GeneID:107995
KEGG:mmu:107995 GeneTree:ENSGT00580000081599 InParanoid:Q9JJ66
NextBio:359849 Bgee:Q9JJ66 CleanEx:MM_CDC20 Genevestigator:Q9JJ66
GermOnline:ENSMUSG00000006398 Uniprot:Q9JJ66
Length = 499
Score = 120 (47.3 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 36/162 (22%), Positives = 71/162 (43%)
Query: 91 RHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPDTY 150
R+ +NL+ ++L++ +D ++++W G + L + + D + + Y
Sbjct: 182 RNDYYLNLVDWSSGNVLAVALDNSVYLWN-AGSGDILQLLQMEQPGDYISSVAWIKEGNY 240
Query: 151 LNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNV 210
L VG+ +QLW++ +K+L +++ G G IH H+V
Sbjct: 241 L---AVGTSNAEVQLWDVQQQKRLRNMTSHSARVSSLSWNSY--ILSSGSRSGHIHHHDV 295
Query: 211 RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIW 252
R E V V L ++ DG+ L ASG + ++++W
Sbjct: 296 RVAEHHVATLSGHSQEVCGLRWAPDGRHL-ASGGNDNIVNVW 336
Score = 97 (39.2 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 36/144 (25%), Positives = 69/144 (47%)
Query: 194 DVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIW 252
+V+AV D +++ N + L G ++++A+ +G LA G S+ + +W
Sbjct: 196 NVLAVAL-DNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGN-YLAVGTSNAEVQLW 253
Query: 253 NLEK-RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRS 311
++++ +RL+++ +H + SL + N +L S S I D + + S
Sbjct: 254 DVQQQKRLRNMT--SHSARVSSLSW--NSYILSSGSRSGHIHH--HDVRVAEHHVATL-S 306
Query: 312 GHSAPPLCIRFYANGRHILSAGQD 335
GHS +R+ +GRH+ S G D
Sbjct: 307 GHSQEVCGLRWAPDGRHLASGGND 330
Score = 92 (37.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 473 HNGEVVGVA-CDSTNTLMISAGYHGD--IKVWDFKGRDLKSRWEVG---CSLVKIVYHR- 525
H G V VA C + ++ + G D I++W+ S +V CS++ +++
Sbjct: 354 HQGAVKAVAWCPWQSNILATGGGTSDRHIRIWNVCSGACLSAVDVHSQVCSILWSPHYKE 413
Query: 526 -VNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
++G + LVI + +A V + +GHT R+ S DG + S+ D +LR+W
Sbjct: 414 LISGH-GFAQNQLVIWKYPTMA--KVAELKGHTARVLGLTMSPDGATVASAAADETLRLW 470
>SGD|S000001744 [details] [associations]
symbol:CAF4 "WD40 repeat-containing protein associated with
the CCR4-NOT complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IPI] [GO:0030014 "CCR4-NOT complex" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016559 "peroxisome
fission" evidence=IGI] [GO:0000266 "mitochondrial fission"
evidence=IMP;IPI] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000001744 GO:GO:0005739 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005741 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006357 EMBL:BK006944
GO:GO:0016559 GO:GO:0030014 EMBL:Z28261 PIR:S38108
RefSeq:NP_012962.3 PDB:2PQR PDBsum:2PQR ProteinModelPortal:P36130
SMR:P36130 DIP:DIP-5945N IntAct:P36130 MINT:MINT-674079
STRING:P36130 PaxDb:P36130 PeptideAtlas:P36130 EnsemblFungi:YKR036C
GeneID:853908 KEGG:sce:YKR036C GeneTree:ENSGT00550000075528
HOGENOM:HOG000048466 OrthoDB:EOG469V30 EvolutionaryTrace:P36130
NextBio:975239 Genevestigator:P36130 GermOnline:YKR036C
GO:GO:0000266 InterPro:IPR021653 Pfam:PF11615 Uniprot:P36130
Length = 643
Score = 142 (55.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 35/97 (36%), Positives = 53/97 (54%)
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
N LAT D ++RL+D+ + VR EGHTD IT F D + L++ MD S+RIWD+
Sbjct: 499 NSALATGTKDGIVRLWDLRVGKPVRLLEGHTDGITSLKF--DSEKLVTGSMDNSVRIWDL 556
Query: 587 ILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGV 623
+ +D I D+ +++L L T ++ GV
Sbjct: 557 RTSSILDVIAYDLPVSSLDFDGK---LITVGANEGGV 590
Score = 72 (30.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 26/105 (24%), Positives = 49/105 (46%)
Query: 88 TWSRHSAKVNLLLLFGEH---ILSIDID---GNMF----------IWAFK-GIEENLAPV 130
T+SR++ + + GEH I ++D D G + +W GI+ P
Sbjct: 301 TYSRNTTAFRMTIPHGEHGNSITALDFDTPWGTLCSSSYQDRIVKVWDLNHGIQVGELP- 359
Query: 131 GHVKLDDKFTPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLY 175
GH+ T C+ N +I GS++ +L+LW+++ +++Y
Sbjct: 360 GHLA-----TVNCMQIDKKNYNMLITGSKDATLKLWDLNLSREIY 399
Score = 65 (27.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/81 (23%), Positives = 37/81 (45%)
Query: 217 VTFTHSMRG-AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+T H G ++TAL F + L +S ++ +W+L +Q H + +
Sbjct: 311 MTIPHGEHGNSITALDFDTPWGTLCSSSYQDRIVKVWDLN-HGIQVGELPGHLATVNCMQ 369
Query: 276 FFA-NEPVLMSASADNSIKMW 295
N +L++ S D ++K+W
Sbjct: 370 IDKKNYNMLITGSKDATLKLW 390
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 447 WIERFNLQSGISRGSYLDM-----SERSNYAHNGEVVGVACD 483
+IE +NL++ + M SE S++ N E + CD
Sbjct: 230 FIEEYNLEADREQSLRKQMEEERSSEASSFTQNEEAISSLCD 271
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 122 (48.0 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVL 283
G V A+ FS G LLA+G + +W + R + NA I S+ F + L
Sbjct: 318 GEVNAVRFSP-GSRLLATGGMDRRVKLWEVVSGRCEPKGALTGSNAGITSIEFDSAGSYL 376
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
++AS D + ++W D D RL +GHS L RF + I+S DR +L+ +
Sbjct: 377 LAASNDFASRIWTVD----DYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDL 432
Score = 92 (37.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 49/196 (25%), Positives = 86/196 (43%)
Query: 450 RFNLQSG-ISRGSY---LDMSE-RSNYAHNGEV-VGVACDS---TNTLMISAGYHGDIKV 500
RF L + I GSY L + + RS V G +C+ T ++S + ++
Sbjct: 410 RFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRF 469
Query: 501 WD--FKGRDLKSRWEVGCSLVKI-VYHRVNGLLATVADDLVIRLFDVV--ALRMVRKFEG 555
WD ++ ++ + C + + + H LL DDLV ++ D+ A+R +G
Sbjct: 470 WDISYQNYHIQKQLNKLCRVTSLDLNHDRTELLTCSRDDLV-KIIDLRTNAVRQTFNAQG 528
Query: 556 HT--DRITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNM 610
T FS DG ++ + DG L +W+V+ L + +D H +I ++S S +
Sbjct: 529 FKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKLEKTLDKGHSS-AINSVSWSLSG 587
Query: 611 DVLATAHVDQNGVYLW 626
+A+ V LW
Sbjct: 588 AFVASVEKGSKAV-LW 602
Score = 85 (35.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/97 (25%), Positives = 46/97 (47%)
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF 322
I +AHD + ++ F +L + D +K+W + +P+ +G +A I F
Sbjct: 312 IFDAHDGEVNAVRFSPGSRLLATGGMDRRVKLWEVVSGRCEPK--GALTGSNAGITSIEF 369
Query: 323 YANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 359
+ G ++L+A D A R+++V D + R H K
Sbjct: 370 DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGK 405
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 161 (61.7 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/194 (24%), Positives = 93/194 (47%)
Query: 150 YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHN 209
Y +K+ GS + + +LW++ T K + F+G P +VA G D + +
Sbjct: 146 YGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWD 205
Query: 210 VRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
++ EE+ T HS + +L+F++ G ++ +G+ + +W+ + R +++ H
Sbjct: 206 IQNGEEVYTLRGHSAE--IISLSFNTSGDRII-TGSFDHTVVVWDADTGRKVNILI-GHC 261
Query: 269 NAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRH 328
I S F + ++++ S D + K+W D T+G + + +GH L F G+
Sbjct: 262 AEISSASFNWDCSLILTGSMDKTCKLW--DATNG--KCVATLTGHDDEILDSCFDYTGKL 317
Query: 329 ILSAGQDRAFRLFS 342
I +A D R+FS
Sbjct: 318 IATASADGTARIFS 331
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/271 (19%), Positives = 112/271 (41%)
Query: 31 TVSVGKAFHIYNCAKLNLVLVGPQLPKKIRALASYRDYTFAAYGNHIAVVKRAHQVATWS 90
+V GK +H + +V + P+ D T + ++ +V T
Sbjct: 163 SVETGKCYHTFRGHTAEIVCLSFN-PQSTLVATGSMDTTAKLWD-----IQNGEEVYTLR 216
Query: 91 RHSAKVNLLLLF---GEHILSIDIDGNMFIW-AFKGIEENLAPVGH-VKLDD-KFTPTCI 144
HSA++ + L F G+ I++ D + +W A G + N+ +GH ++ F C
Sbjct: 217 GHSAEI-ISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNIL-IGHCAEISSASFNWDCS 274
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
+ ++ GS + + +LW+ + K + G ++A +DG
Sbjct: 275 L--------ILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGT 326
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR 264
+ + + + G ++ ++F+ G LL +G+S IW+ + + V+
Sbjct: 327 ARIFSAA-TRKCIAKLEGHEGEISKISFNPQGNHLL-TGSSDKTARIWDAQTGQCLQVL- 383
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMW 295
E H + I S F ++++ S DN+ ++W
Sbjct: 384 EGHTDEIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 122 (48.0 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 49/238 (20%), Positives = 99/238 (41%)
Query: 392 VVTCHMDTAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERF 451
V T MDT A +W +QN GE + + + + + + G+ + G+ + +
Sbjct: 192 VATGSMDTT-AKLWDIQN---GEEVYT-LRGHSAEIISLSFNTSGDRIITGSFDHTVVVW 246
Query: 452 NLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKS 510
+ +G + + L H E+ + + +L+++ K+WD G+ + +
Sbjct: 247 DADTG-RKVNIL-------IGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVAT 298
Query: 511 RWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGK 570
++ + L+AT + D R+F + + K EGH I+ F+ G
Sbjct: 299 LTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGN 358
Query: 571 WLLSSGMDGSLRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
LL+ D + RIWD + + + H D I + + + +++ T D N +W
Sbjct: 359 HLLTGSSDKTARIWDAQTGQCLQVLEGHTD-EIFSCAFNYKGNIVITGSKD-NTCRIW 414
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 59/264 (22%), Positives = 117/264 (44%)
Query: 80 VKRAHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKF 139
+++A + T SR + +V LL+ + L + N + FK ++ ++ P+ +V L+
Sbjct: 48 IQKAEPLLTASR-TEQVKLLIQRLQEKLGQN--SNHTFYLFKVLKAHILPLTNVALNK-- 102
Query: 140 TPTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXXXPALDVVAV 198
+ +C I GS + + +LW+ ++ ++L +G P D +A
Sbjct: 103 SGSCF----------ITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIAT 152
Query: 199 GCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKR 257
G D + +V + TF H+ + L+F+ L+A+G+ +W+++
Sbjct: 153 GSFDKTCKLWSVETGKCYHTFRGHTAE--IVCLSFNPQST-LVATGSMDTTAKLWDIQNG 209
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
+R H IISL F + +++ S D+++ +W DT G R + GH A
Sbjct: 210 EEVYTLR-GHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT--G--RKVNILIGHCAEI 264
Query: 318 LCIRFYANGRHILSAGQDRAFRLF 341
F + IL+ D+ +L+
Sbjct: 265 SSASFNWDCSLILTGSMDKTCKLW 288
Score = 119 (46.9 bits), Expect = 0.00098, P = 0.00098
Identities = 43/216 (19%), Positives = 92/216 (42%)
Query: 143 CI-MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS 201
C+ +P + L V GS + + +LW+I +++Y +G + D + G
Sbjct: 182 CLSFNPQSTL--VATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSF 239
Query: 202 DGKIHVHNVRYDEEL-VTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQ 260
D + V + ++ + H +++ +F+ D L+ +G+ +W+ +
Sbjct: 240 DHTVVVWDADTGRKVNILIGHCAE--ISSASFNWDCS-LILTGSMDKTCKLWDATNGKCV 296
Query: 261 SVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI 320
+ + HD+ I+ F ++ +ASAD + +++ T +L GH I
Sbjct: 297 ATLT-GHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKL----EGHEGEISKI 351
Query: 321 RFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
F G H+L+ D+ R++ Q Q ++ + H
Sbjct: 352 SFNPQGNHLLTGSSDKTARIWDA-QTGQCLQVLEGH 386
Score = 74 (31.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 25/120 (20%), Positives = 51/120 (42%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV---L 283
+T +A + G + +G+ +W+ + + E H N + ++ F N P +
Sbjct: 95 LTNVALNKSGSCFI-TGSYDRTCKLWDTASGEELNTL-EGHRNVVYAIAF--NNPYGDKI 150
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ S D + K+W +T FR GH+A +C+ F + + D +L+ +
Sbjct: 151 ATGSFDKTCKLWSVET---GKCYHTFR-GHTAEIVCLSFNPQSTLVATGSMDTTAKLWDI 206
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 43/157 (27%), Positives = 78/157 (49%)
Query: 197 AVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
A S+GKI+++N + + T + +G ++ + +S +LAS + I +WN+ +
Sbjct: 42 ACSSSNGKIYIYNTTTGKLITTLSGHTKG-ISDIVYSPINSNILASCSDDLTIRLWNITQ 100
Query: 257 RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAP 316
+R ++R+ H I +L F +L+S S+D +I +W D T ++L + HS P
Sbjct: 101 QRCIKLLRK-HTYHITTLKFTQKGNILISGSSDETITIW--DITSNGGKILTTLAAHSDP 157
Query: 317 PLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELS 353
I + I+SA D RLF + Q + L+
Sbjct: 158 VSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLT 194
Score = 136 (52.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/104 (30%), Positives = 59/104 (56%)
Query: 521 IVYHRVNG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG 579
IVY +N +LA+ +DDL IRL+++ R ++ HT IT F++ G L+S D
Sbjct: 74 IVYSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDE 133
Query: 580 SLRIWDVIL--ARQID--AIHVDVSITALSLSPNMDVLATAHVD 619
++ IWD+ + + A H D +++++L+P+ ++ +A D
Sbjct: 134 TITIWDITSNGGKILTTLAAHSD-PVSSIALTPDDSIIVSASYD 176
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 134 (52.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 23/91 (25%), Positives = 51/91 (56%)
Query: 496 GDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEG 555
G +K+WD + + ++ ++ + ++ + + + D I+++D+ +++ +G
Sbjct: 164 GTVKLWDIRKKASVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQG 223
Query: 556 HTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
H D +T S DG +LLS+ MD S+R+WD+
Sbjct: 224 HGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
Score = 129 (50.5 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 67/319 (21%), Positives = 134/319 (42%)
Query: 44 AKLNLVLVGPQLPKKIRALASYRDYTFAAYGNHIAVVKRAHQVATWSRHSAKVNLLLLF- 102
A + +V VG + P+ +A+ + +A G + +A + S H +V
Sbjct: 9 ADMAVVPVGVKRPRT-ELVAAAQSQQLSAMGPPRSSSLQA-PIMLLSGHEGEVYCCKFHP 66
Query: 103 -GEHILSIDIDGNMFIWAFKGIEENLAPV-GHVKLDDKFTPTCIMHPDTYLNKVIVGSQE 160
G + S D + +W G EN A + GH +H +T + + S +
Sbjct: 67 NGATLASSGYDRLILMWNVYGDCENYATLKGHSGA------VMELHYNTDGSLLFSASTD 120
Query: 161 GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPAL---DVVAVGCSDGKIHVHNVRYDEELV 217
++ +W+ T +++ KG PA + G DG + + ++R +
Sbjct: 121 KTVCVWDSETGERVKRLKG--HTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKASVH 178
Query: 218 TFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFF 277
TF ++ + V ++ F+ +++ G + I +W+L + +L + + H +++ L
Sbjct: 179 TFQNTYQ--VLSVTFNDTSDQIISGGIDND-IKVWDLRQNKLIYSM-QGHGDSVTGLSLS 234
Query: 278 ANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG--HSAPPLCIR--FYANGRHILSAG 333
A+ L+S S DNS+++W R ++ G H+ +R + A+G I +
Sbjct: 235 ADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGS 294
Query: 334 QDRAFRLFSVIQDQQSREL 352
DR F I D +R +
Sbjct: 295 ADR----FVYIWDTTTRRI 309
Score = 123 (48.4 bits), Expect = 0.00026, P = 0.00026
Identities = 44/194 (22%), Positives = 89/194 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEV-GCS--LVKIVYHRVNGL 529
H GEV + S+GY I +W+ G D ++ + G S ++++ Y+ L
Sbjct: 55 HEGEVYCCKFHPNGATLASSGYDRLILMWNVYG-DCENYATLKGHSGAVMELHYNTDGSL 113
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMD-GSLRIWDVI 587
L + + D + ++D V++ +GHT + CF + G L +G D G++++WD+
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSFVNS-CFPARRGPQLACTGSDDGTVKLWDIR 172
Query: 588 LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW---VNRCMFS----GDS--NI 638
+ + +++ + D + + +D N + +W N+ ++S GDS +
Sbjct: 173 KKASVHTFQNTYQVLSVTFNDTSDQIISGGID-NDIKVWDLRQNKLIYSMQGHGDSVTGL 231
Query: 639 DSYASGKEIVSVKM 652
A G ++S M
Sbjct: 232 SLSADGSYLLSNSM 245
Score = 95 (38.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 476 EVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL-KSRWEVGCSLVKIVYHRVNGLLATVA 534
+V+ V + T+ +IS G DIKVWD + L S G S+ + L + +
Sbjct: 185 QVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNS 244
Query: 535 DDLVIRLFDVVAL----RMVRKFEGHTDRITDF---C-FSEDGKWLLSSGMDGSLRIWDV 586
D +R++D+ R V+ F+G+ C +S DG + + D + IWD
Sbjct: 245 MDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDT 304
Query: 587 ILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYL 625
R + + H S+ ++ P ++ + D+ +Y+
Sbjct: 305 TTRRIVYKLPGHAG-SVNEVAFHPEEPIVLSGSSDKR-LYI 343
Score = 71 (30.1 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRH 356
SGH C +F+ NG + S+G DR +++V D ++ + H
Sbjct: 53 SGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGH 98
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 49/157 (31%), Positives = 71/157 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
H+GEV A +++A G + VW K L R VK +G L+A
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA 84
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D IRL+DV + + +GH + FS D K L S G D +W+V R+
Sbjct: 85 SSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRR 144
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D SI + SP D LAT D V++W
Sbjct: 145 VHLLVGHCD-SIQSSDFSPTSDSLATGSWDST-VHIW 179
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 67/269 (24%), Positives = 113/269 (42%)
Query: 85 QVATWSRHSAKVNLLLLF--GEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPT 142
+V + +H +VN G +L+ DG +++W K GH + K +
Sbjct: 18 RVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGH-RGPVK---S 73
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSD 202
C PD L + S + S++LW+++ K L+ KG P +A G D
Sbjct: 74 CCFSPDGRL--IASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWD 131
Query: 203 GKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPL---LASGASSGVISIWNLEKRRL 259
+ V V+ + H + G ++ SSD P LA+G+ + IW+L R
Sbjct: 132 KRAIVWEVQSGRRV----HLLVGHCDSIQ-SSDFSPTSDSLATGSWDSTVHIWDL--RAS 184
Query: 260 QSVIR----EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
V+ E H I L + A+ +L S S D +I +W TT+ P L+ GH+
Sbjct: 185 TPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWK-PTTNNLPLQLK---GHTI 239
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSVI 344
+ F + + SAG R +++ +
Sbjct: 240 WVNSLAFSPDELKLASAGYSRTVKVWDCL 268
Score = 89 (36.4 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 35/180 (19%), Positives = 79/180 (43%)
Query: 444 AGGWIER---FNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKV 500
+GGW +R + +QSG R +L + H + T+ + + + + +
Sbjct: 127 SGGWDKRAIVWEVQSG--RRVHLLVG------HCDSIQSSDFSPTSDSLATGSWDSTVHI 178
Query: 501 WDFKGRDLKSRW---EVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHT 557
WD + + E + + + +GLLA+ + D I ++ + + +GHT
Sbjct: 179 WDLRASTPVVSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHT 238
Query: 558 DRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIH--VDVSITALSLSPNMDVLAT 615
+ FS D L S+G ++++WD + + ++ + +DV+ + +P+ +L +
Sbjct: 239 IWVNSLAFSPDELKLASAGYSRTVKVWDCLTGKCLETLKGMLDVAHACI-FTPDGKLLVS 297
Score = 78 (32.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 24/81 (29%), Positives = 37/81 (45%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANG 326
H + F + L++AS D + +W T G RLL +GH P F +G
Sbjct: 25 HHGEVNCSAFSPDGRTLLTASDDGCVYVW--GTKSG--RLLWRLAGHRGPVKSCCFSPDG 80
Query: 327 RHILSAGQDRAFRLFSVIQDQ 347
R I S+ D + RL+ V + +
Sbjct: 81 RLIASSSSDHSIRLWDVARSK 101
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 119 (46.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 36/120 (30%), Positives = 57/120 (47%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVL 283
G V A+ FS G LLA+G + +W + R + + NA I S+ F + L
Sbjct: 323 GEVNAVQFSP-GSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYL 381
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
++AS D + ++W D D RL +GHS L +F + I+S DR +L+ +
Sbjct: 382 LAASNDFASRIWTVD----DNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 437
Score = 94 (38.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 41/162 (25%), Positives = 72/162 (44%)
Query: 479 GVACDS---TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVAD 535
G +C+ T ++S + I+ WD + + E+ + + + L T +
Sbjct: 450 GSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESIVKELELLGRITALDLNSERTELLTCSR 509
Query: 536 DLVIRLFD--VVALRMVRKFEGHT--DRITDFCFSEDGKWLLSSGMDGSLRIWDVI---L 588
D ++++ D V A++ +G T FS DG ++ + DG+L +W+V+ L
Sbjct: 510 DDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKL 569
Query: 589 ARQIDAIHVDVSITALSLSPNMDVLATAHV---DQ-NGVYLW 626
R + A H I A++ SP A AHV D+ N LW
Sbjct: 570 ERTL-AKHHSSPINAVAWSP-----AGAHVVSVDKGNKAVLW 605
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYA 324
+AHD + ++ F +L + D +K+W +P+ SG +A I F +
Sbjct: 319 DAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPK--GSLSGSNAGITSIEFDS 376
Query: 325 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 359
G ++L+A D A R+++V D + R H K
Sbjct: 377 AGSYLLAASNDFASRIWTV-DDNRLRHTLTGHSGK 410
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 148 (57.2 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 49/206 (23%), Positives = 93/206 (45%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ +S+ G FA+ G+ G + ++L +G S ++ H +V+ VA + N
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFV--------GHTKDVLSVAFSTDN 117
Query: 487 TLMISAGYHGDIKVWDFKGRDLK---SRWEVGCSLVKIVYHRVNGLLATVAD---DLVIR 540
++SA IK+W+ G + K S + V V N L+ T+ D ++
Sbjct: 118 RQIVSASRDRTIKLWNTLG-ECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 600
++++ ++ GH+ + S DG S G DG + +WD+ +++ ++
Sbjct: 177 VWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI 236
Query: 601 ITALSLSPNMDVLATAHVDQNGVYLW 626
I +L SPN L A +N + +W
Sbjct: 237 IHSLCFSPNRYWLCAA--TENSIRIW 260
Score = 127 (49.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 64/219 (29%), Positives = 97/219 (44%)
Query: 83 AHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPT 142
A + T H + +L G+ LS DG + +W E VGH K D +
Sbjct: 55 AQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTK--DVLSVA 112
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNI--STKKKLYEFKGWGXXXXXXXXXP-ALDVVAVG 199
T +++ S++ +++LWN K + E G P L V
Sbjct: 113 F----STDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVS 168
Query: 200 CS-DGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL-EK 256
S D + V N++ + T HS G + +A S DG L ASG GVI +W+L E
Sbjct: 169 ASWDKTVKVWNLQNCKLRNTLAGHS--GYLNTVAVSPDGS-LCASGGKDGVILLWDLAEG 225
Query: 257 RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
++L S+ EA + I SL F N L +A+ +NSI++W
Sbjct: 226 KKLYSL--EA-GSIIHSLCFSPNRYWLCAAT-ENSIRIW 260
Score = 109 (43.4 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 47/216 (21%), Positives = 91/216 (42%)
Query: 142 TCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALD--VV 196
T I P + ++ S++ S+ LW ++ + K Y + + G + D
Sbjct: 19 TAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFA 78
Query: 197 AVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
G DG++ + ++ E F + V ++AFS+D + ++ S + I +WN
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKD-VLSVAFSTDNRQIV-SASRDRTIKLWNT-L 135
Query: 257 RRLQSVIREA--HDNAIISLHFFANE--PVLMSASADNSIKMWIFDTTDGDPRLLRFRSG 312
+ I EA H + + F N P ++SAS D ++K+W +L +G
Sbjct: 136 GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC----KLRNTLAG 191
Query: 313 HSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
HS + +G S G+D L+ + + ++
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK 227
Score = 104 (41.7 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 474 NGEVVGVACD--STNTLM---ISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG 528
+G V+C S NTL+ +SA + +KVW+ + L++ + V +G
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDG 205
Query: 529 -LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
L A+ D VI L+D+ + + E + I CFS + WL ++ + S+RIWD+
Sbjct: 206 SLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAA-TENSIRIWDLE 263
Query: 588 LARQIDAIHVDVSITA 603
++ + VD+ A
Sbjct: 264 SKSVVEDLKVDLKAEA 279
Score = 102 (41.0 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKR-RLQSVIRE---AHDNAIISLHFFANEPV 282
VTA+A D ++ + + I +W L K + V + H + + + ++
Sbjct: 18 VTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQF 77
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+S S D +++W T + R + GH+ L + F + R I+SA +DR +L++
Sbjct: 78 ALSGSWDGELRLWDLATGESTRRFV----GHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 343 VI 344
+
Sbjct: 134 TL 135
Score = 64 (27.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 279 NEPVLMSASADNSIKMWIFDTTDGDPRLLRFR-SGHSAPPLCIRFYANGRHILSAGQDRA 337
N V++++S D SI +W D + + R +GHS + ++G+ LS D
Sbjct: 27 NSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGE 86
Query: 338 FRLFSVIQDQQSR 350
RL+ + + +R
Sbjct: 87 LRLWDLATGESTR 99
Score = 53 (23.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 561 TDFCFSEDGKWLLSSGMDGSLRIWDV 586
T +S DG L S DG +R+W +
Sbjct: 298 TSLNWSADGNTLFSGYTDGVIRVWGI 323
Score = 53 (23.7 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 464 DMSE-RSNYA-HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDL 508
D++E + Y+ G ++ C S N + A I++WD + + +
Sbjct: 221 DLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSV 267
Score = 37 (18.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 7/33 (21%), Positives = 21/33 (63%)
Query: 325 NGRHILSAGQDRAFRLFSVIQDQQSRELSQRHV 357
N I+++ +D++ L+ + ++ +S ++QR +
Sbjct: 27 NSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRM 59
>FB|FBgn0025725 [details] [associations]
symbol:alphaCop "alpha-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS;NAS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0016192 "vesicle-mediated transport"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0000902
"cell morphogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0006911 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000902 GO:GO:0030126 GO:GO:0010883
InterPro:IPR016391 PIRSF:PIRSF003354 EMBL:AJ011114
ProteinModelPortal:O77285 SMR:O77285 STRING:O77285 PaxDb:O77285
PRIDE:O77285 FlyBase:FBgn0025725 InParanoid:O77285
OrthoDB:EOG4CFXQ2 ChiTaRS:alphaCop ArrayExpress:O77285 Bgee:O77285
Uniprot:O77285
Length = 1234
Score = 129 (50.5 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 38/148 (25%), Positives = 69/148 (46%)
Query: 196 VAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
+ V G I + + R L F G V +AF PL SG I +WN +
Sbjct: 24 ILVSLHSGVIQLWDYRMHTLLEKFDEH-DGPVRGVAFHQQ-MPLFVSGGDDYKIKVWNYK 81
Query: 256 KRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSA 315
+RR + AH + + ++ F P ++SAS D +I++W + + + + +GH+
Sbjct: 82 QRRCIFTLL-AHLDYVRTVAFHHEYPWILSASDDQTIRIWNWQSRN----CICVLTGHNH 136
Query: 316 PPLCIRFYANGRHILSAGQDRAFRLFSV 343
+C +F+ I+SA D+ R++ +
Sbjct: 137 YVMCAQFHPTEDQIVSASLDQTVRVWDI 164
Score = 117 (46.2 bits), Expect = 5.5e-07, Sum P(3) = 5.5e-07
Identities = 46/192 (23%), Positives = 76/192 (39%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++V G +QLW+ L +F + + G D KI V N +
Sbjct: 24 ILVSLHSGVIQLWDYRMHTLLEKFDEHDGPVRGVAFHQQMPLFVSGGDDYKIKVWNYKQR 83
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
+ T + V +AF + P + S + I IWN + R V+ H++ ++
Sbjct: 84 RCIFTLLAHL-DYVRTVAFHHE-YPWILSASDDQTIRIWNWQSRNCICVLT-GHNHYVMC 140
Query: 274 LHFFANEPVLMSASADNSIKMWIF------DTTDGDPRLLRFRSGH-SAPPLCIRFYANG 326
F E ++SAS D ++++W + G L GH A L + A
Sbjct: 141 AQFHPTEDQIVSASLDQTVRVWDISGLRKKNVAPGPGGLDDHLKGHPGATDLFGQADAVV 200
Query: 327 RHILSAGQDRAF 338
+H+L G DR F
Sbjct: 201 KHVLE-GHDRGF 211
Score = 90 (36.7 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 31/127 (24%), Positives = 51/127 (40%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
++T S V L+F +P + SGVI +W+ L E HD + +
Sbjct: 1 MLTNFESKSARVKGLSFHPK-RPWILVSLHSGVIQLWDYRMHTLLEKFDE-HDGPVRGVA 58
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQD 335
F P+ +S D IK+W + R + H + F+ ILSA D
Sbjct: 59 FHQQMPLFVSGGDDYKIKVWNYKQR----RCIFTLLAHLDYVRTVAFHHEYPWILSASDD 114
Query: 336 RAFRLFS 342
+ R+++
Sbjct: 115 QTIRIWN 121
Score = 86 (35.3 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 523 YHRVNGLLATVADDLVIRLFDVVALRM--VRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+H L+ + ADD +++L+ + + V GH + ++ F +LS+G D S
Sbjct: 216 FHPTLPLIVSGADDRLVKLWRMNEYKAWEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRS 275
Query: 581 LRIWDVILARQIDAIHVDVS-ITALSLSPNMDVLATAH 617
+R+WD+ + + D L+ P +++ A H
Sbjct: 276 IRVWDMTKRQCLFTFRRDNERFWILTAHPTLNLFAAGH 313
Score = 62 (26.9 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 25/121 (20%), Positives = 56/121 (46%)
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVG-C-----SLVKIVYHRVNGLLATVADDLV 538
T L++S +K+W + + K+ WEV C ++ +++H L+ + +D
Sbjct: 219 TLPLIVSGADDRLVKLW--RMNEYKA-WEVDTCRGHYNNVSSVLFHPRQDLILSNGEDRS 275
Query: 539 IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVD 598
IR++D+ + + F +R + L ++G DG + ++ + R A+H +
Sbjct: 276 IRVWDMTKRQCLFTFRRDNERFW-ILTAHPTLNLFAAGHDGGMVVFKLERERPAYAVHGN 334
Query: 599 V 599
+
Sbjct: 335 I 335
Score = 52 (23.4 bits), Expect = 3.1e-08, Sum P(3) = 3.1e-08
Identities = 21/91 (23%), Positives = 39/91 (42%)
Query: 765 TKPDIPVSQFIQLLHSCAEMKNFSAFTDYIKSLSPSTLDMELRMLQIIDHDDHQELDKRP 824
TK D +Q QLL CAE K + STL+ + R+ ++ + H +L
Sbjct: 1053 TKLDAAEAQ--QLLRICAEYIVGLKMETVRKGMPKSTLEEQKRLCEMAAYFTHCKLQPVH 1110
Query: 825 EYLSIELLLDYLIHEISCRNNFEFIQAVIRL 855
+ L++ L+ + + F + ++ L
Sbjct: 1111 QILTLRTALNMFFKLKNYKTAASFARRLLEL 1141
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVEDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 119 (46.9 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
>ZFIN|ZDB-GENE-040426-2370 [details] [associations]
symbol:aamp "angio-associated, migratory cell
protein" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2370
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:14 HOGENOM:HOG000261676
HOVERGEN:HBG061307 OrthoDB:EOG4D26PX EMBL:BC067708 IPI:IPI00502410
RefSeq:NP_998103.1 UniGene:Dr.11399 ProteinModelPortal:Q6NW65
STRING:Q6NW65 PRIDE:Q6NW65 GeneID:405874 KEGG:dre:405874
NextBio:20817836 ArrayExpress:Q6NW65 Bgee:Q6NW65 Uniprot:Q6NW65
Length = 420
Score = 121 (47.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 48/156 (30%), Positives = 74/156 (47%)
Query: 191 PALDVVAV-GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVI 249
P + +A+ G D + + V E L+ T + +V + FSSD L ASG SGVI
Sbjct: 92 PLTNSLAMSGGEDDRAFLWRVCDGEVLLECT-GHKDSVVCVGFSSDSA-LAASGDMSGVI 149
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRF 309
+W++EKR + E D + H A PVL++ AD S+ MW + G R F
Sbjct: 150 RVWSVEKRE-EVWSAEVGDLEWLEWHPCA--PVLLAGVADGSVWMWKLPS--GACRT--F 202
Query: 310 RSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
+S C R +G+ + +D + RL+ + Q
Sbjct: 203 QSP-GCQTTCGRILPDGKRAIVGYEDGSLRLWDLKQ 237
Score = 87 (35.7 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 32/152 (21%), Positives = 69/152 (45%)
Query: 436 GNFAVLGTAGGWIERFNLQSGISRGSYLDM-SERSNYAHNGEVVGVACDSTNTLMISA-G 493
G + G+ G + + SG S+ SE S A + V + N L ++A
Sbjct: 263 GALLLSGSVDGQAKLISSSSGKVLCSFSSQTSEGSGSAQDSNSVE-SVGFCNVLPLAAVA 321
Query: 494 Y-HGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRK 552
Y G + ++D L+ + + +V++ + + ++ T + V+ L+D + +V +
Sbjct: 322 YLDGTLAIYDLNTHTLRHQCKHEVGVVQLQWEAESAVVCTCSLSGVLSLWDARSGVLVSE 381
Query: 553 FEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
F GH+ I DF + + +++G D +++
Sbjct: 382 FHGHSAEILDFVLNREASVAVTAGGDHKAKVF 413
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 142 (55.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 33/157 (21%), Positives = 72/157 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H + + + L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 62 HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA 121
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+DV + K++ HT + FS DGKWL S+ D ++++WD+ +
Sbjct: 122 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 181
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ H + + P+++ L + + W
Sbjct: 182 MFEFTGHYG-PVNVVEFHPSIEYLLASGSSSMTIRFW 217
Score = 137 (53.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 425 TAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDS 484
T +++ ISA V G+ G I ++L++ L R+ H + +
Sbjct: 64 TPIESLQISAKEELIVAGSQSGSIRVWDLEAA----KIL----RTLLGHKANICSLDFHP 115
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LATVADDLVIRLFD 543
+ + S DIK+WD + + +++ V+ + +G LA+ ADD ++L+D
Sbjct: 116 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 175
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG-SLRIWDVILARQIDAIHVDVS-I 601
+ A +++ +F GH + F ++LL+SG ++R WD+ + I + + +
Sbjct: 176 LTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPV 235
Query: 602 TALSLSPNMDVLATAHVDQNGVYLWV-NRC 630
+ +P+ L D VY W RC
Sbjct: 236 RCILFNPDGCCLYGGFQDSLRVYGWEPERC 265
Score = 132 (51.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 39/150 (26%), Positives = 75/150 (50%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D +++V +V +++ T H+ + +L S+ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTT--PIESLQISAK-EELIVAGSQSGSIRVWD 91
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D IK+W D + +++S H
Sbjct: 92 LEAAKILRTLL-GHKANICSLDFHPYGSFVASGSLDTDIKLW--DVRRKGC-IFKYKS-H 146
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ C+RF +G+ + SA D +L+ +
Sbjct: 147 TQAVRCLRFSPDGKWLASAADDHTVKLWDL 176
Score = 108 (43.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
+E+V HS V++L LLA+G +++W++ K + H I S
Sbjct: 14 QEIVA--HSSN--VSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMSLT-GHTTPIES 68
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
L A E ++++ S SI++W + ++LR GH A + F+ G + S
Sbjct: 69 LQISAKEELIVAGSQSGSIRVWDLEAA----KILRTLLGHKANICSLDFHPYGSFVASGS 124
Query: 334 QDRAFRLFSV 343
D +L+ V
Sbjct: 125 LDTDIKLWDV 134
Score = 81 (33.6 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 42/183 (22%), Positives = 76/183 (41%)
Query: 489 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YH-RVNGLLATVADDLVIRLFDVVA 546
+ SA +K+WD + + V +V +H + LLA+ + + IR +D+
Sbjct: 162 LASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 221
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITA-LS 605
+V E + F+ DG L G SLR++ R D + V+ A LS
Sbjct: 222 FHVVSCIEEEATPVRCILFNPDG-CCLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLS 280
Query: 606 LSPNMDV-LATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDE 664
+ N + ++ A + + ++R SG S E+++ P+ SS+ D
Sbjct: 281 VCHNQLIGVSFAQSTVSSFVVDLSRVTKSG-SVPHGLLRNNELLAQPTPTGSSLRRSYDR 339
Query: 665 NSS 667
S+
Sbjct: 340 PST 342
>UNIPROTKB|E1BM03 [details] [associations]
symbol:WDR3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965 InterPro:IPR020472
PRINTS:PR00320 InterPro:IPR007148 Pfam:PF04003
GeneTree:ENSGT00550000074925 KO:K14556 OMA:SIFAHDD CTD:10885
EMBL:DAAA02007388 IPI:IPI00694068 RefSeq:NP_001179317.1
UniGene:Bt.25958 ProteinModelPortal:E1BM03 PRIDE:E1BM03
Ensembl:ENSBTAT00000026561 GeneID:514870 KEGG:bta:514870
NextBio:20871548 Uniprot:E1BM03
Length = 943
Score = 115 (45.5 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 39/180 (21%), Positives = 76/180 (42%)
Query: 165 LWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMR 224
+W++ +K+ +G P +AVG DG I + ++ E VTF + +
Sbjct: 49 IWDLRKGEKILILQGLKHEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTF-NGHK 107
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIR-EAHDNAIISLHFFANEPVL 283
A+T+L + G L ASG+ I +W++ + R + H +AI F + +L
Sbjct: 108 AAITSLKYDQLGGRL-ASGSKDTDIIVWDVINE--SGLYRLKGHKDAITQALFLREKNLL 164
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+++ D +K W DT + GH + + + +++ D R + +
Sbjct: 165 VTSGKDTMVKWWDLDTQ----HCFKTMVGHRTEVWGLVLVSEEKRLITGASDSELRAWDI 220
Score = 102 (41.0 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 31/119 (26%), Positives = 53/119 (44%)
Query: 469 SNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW--DFKGRDLKSRWEVGCSLVKIVYHRV 526
S Y H V+ + L+ + ++K+W DF G KS + S++ + +
Sbjct: 586 SLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDF-GDCHKSLFAHDDSVMYLRFVPK 644
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
+ L T D I+ +D ++ EGH I S G +++SS D SLR+W+
Sbjct: 645 SHLFFTAGKDRKIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSSSHDKSLRLWE 703
Score = 93 (37.8 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 224 RGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVL 283
R V L+FSSD +L++ A S I IWN + LQ + A + A+ S + V+
Sbjct: 415 RSDVRTLSFSSDNIAILSAAADS--IKIWN--RSTLQCIRTMACEYALCSFFVPGDRQVV 470
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRL--F 341
+ K+ ++D G+ LL H + + R ++ G D++ + F
Sbjct: 471 IGTKTG---KLQLYDLASGN--LLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDF 525
Query: 342 SVIQDQQSRELSQRHVAKRAR 362
+++D+ S + +R K+ R
Sbjct: 526 ELVKDENSTQ--KRLSVKQTR 544
Score = 90 (36.7 bits), Expect = 6.3e-07, Sum P(2) = 6.3e-07
Identities = 48/217 (22%), Positives = 87/217 (40%)
Query: 429 ACTISACGNFA------VLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVAC 482
AC + C F V+GT G ++ ++L SG + L+ + AH+G + ++
Sbjct: 453 ACEYALCSFFVPGDRQVVIGTKTGKLQLYDLASG----NLLETID----AHDGALWSLSL 504
Query: 483 DSTNTLMISAGYHGDIKVWDFK-GRDLKS---RWEVGCS--------LVKIVYHRVNGLL 530
++ G +K WDF+ +D S R V + ++ + Y LL
Sbjct: 505 SPDQRGFVTGGADKSVKFWDFELVKDENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLL 564
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
A D +++F V L+ GH + S DG + + D +++IW +
Sbjct: 565 AVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISYDGALIATGSADRNVKIWGLDFGD 624
Query: 591 QIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
++ D S+ L P + TA D+ + W
Sbjct: 625 CHKSLFAHDDSVMYLRFVPKSHLFFTAGKDRK-IKQW 660
Score = 88 (36.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 36/174 (20%), Positives = 70/174 (40%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H +V ++ S N ++SA IK+W+ L+ + C + V G
Sbjct: 414 HRSDVRTLSFSSDNIAILSAAADS-IKIWNRS--TLQCIRTMACEYALCSFF-VPGDRQV 469
Query: 533 VADDLV--IRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
V ++L+D+ + ++ + H + S D + ++ G D S++ WD L +
Sbjct: 470 VIGTKTGKLQLYDLASGNLLETIDAHDGALWSLSLSPDQRGFVTGGADKSVKFWDFELVK 529
Query: 591 ------------QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMF 632
Q + +D + +S SPN +LA + +D +V+ F
Sbjct: 530 DENSTQKRLSVKQTRTLQLDEEVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKF 583
Score = 86 (35.3 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 44/207 (21%), Positives = 88/207 (42%)
Query: 93 SAKVNLLL--LFGE--HILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPTCIMHPD 148
S K N++ L GE +++ ++FIW + E+ L G L + T C PD
Sbjct: 21 SQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILILQG---LKHEVTCLC-PSPD 76
Query: 149 TYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVH 208
+ VG ++GS++++++ + + F G +A G D I V
Sbjct: 77 GL--HLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITSLKYDQLGGRLASGSKDTDIIVW 134
Query: 209 NVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHD 268
+V + L + A+T F + L+ SG + ++ W+L+ + + H
Sbjct: 135 DVINESGLYRLK-GHKDAITQALFLREKNLLVTSGKDT-MVKWWDLDTQHCFKTM-VGHR 191
Query: 269 NAIISLHFFANEPVLMSASADNSIKMW 295
+ L + E L++ ++D+ ++ W
Sbjct: 192 TEVWGLVLVSEEKRLITGASDSELRAW 218
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 6/17 (35%), Positives = 12/17 (70%)
Query: 153 KVIVGSQEGSLQLWNIS 169
++I G+ + L+ W+IS
Sbjct: 205 RLITGASDSELRAWDIS 221
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 120 (47.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 521 IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGS 580
+ +H + T + D R++DV VR F GHT + DG+WL + DG
Sbjct: 615 VSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGI 674
Query: 581 LRIWDVILARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ +WD+ +++ + H +I +LS S +VL + D V +W
Sbjct: 675 INVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHT-VRVW 721
Score = 112 (44.5 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 37/142 (26%), Positives = 67/142 (47%)
Query: 205 IHVHNVRYDEELVTFT---HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS 261
I ++N DE+ T HS G V + +FS D + LL SG+ + +W+++
Sbjct: 505 IALNNNDKDEDPTCKTLVGHS--GTVYSTSFSPDNKYLL-SGSEDKTVRLWSMDTHTAL- 560
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
V + H++ + + F +AS D + ++W D P LR +GH C+
Sbjct: 561 VSYKGHNHPVWDVSFSPLGHYFATASHDQTARLWSCDHIY--P--LRIFAGHLNDVDCVS 616
Query: 322 FYANGRHILSAGQDRAFRLFSV 343
F+ NG ++ + D+ R++ V
Sbjct: 617 FHPNGCYVFTGSSDKTCRMWDV 638
Score = 95 (38.5 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 34/143 (23%), Positives = 63/143 (44%)
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQS---VIRE------- 265
+ TF ++ + ++ L FS D + + A+G I IW+L+ L + +
Sbjct: 459 MYTFQNTNKD-MSCLDFSDDCR-IAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDP 516
Query: 266 ------AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLC 319
H + S F + L+S S D ++++W DT L+ ++ GH+ P
Sbjct: 517 TCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTA---LVSYK-GHNHPVWD 572
Query: 320 IRFYANGRHILSAGQDRAFRLFS 342
+ F G + +A D+ RL+S
Sbjct: 573 VSFSPLGHYFATASHDQTARLWS 595
Score = 93 (37.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
Identities = 17/58 (29%), Positives = 37/58 (63%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
L+T ++D +I ++D+ + +++ GH + I +S++G L+S G D ++R+WD+
Sbjct: 666 LSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDL 723
Score = 85 (35.0 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 30/145 (20%), Positives = 62/145 (42%)
Query: 199 GCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
G D + + ++ LV++ V ++FS G A+ + +W+ +
Sbjct: 543 GSEDKTVRLWSMDTHTALVSYK-GHNHPVWDVSFSPLGH-YFATASHDQTARLWSCDHIY 600
Query: 259 LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
+ H N + + F N + + S+D + +MW D + GD +R GH+AP +
Sbjct: 601 PLRIFA-GHLNDVDCVSFHPNGCYVFTGSSDKTCRMW--DVSTGDS--VRLFLGHTAPVI 655
Query: 319 CIRFYANGRHILSAGQDRAFRLFSV 343
I +GR + + +D ++ +
Sbjct: 656 SIAVCPDGRWLSTGSEDGIINVWDI 680
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 146 (56.5 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 48/206 (23%), Positives = 93/206 (45%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ +S+ G FA+ G+ G + ++L +G + ++ H +V+ VA + N
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFV--------GHTKDVLSVAFSTDN 117
Query: 487 TLMISAGYHGDIKVWDFKGRDLK---SRWEVGCSLVKIVYHRVNGLLATVAD---DLVIR 540
++SA IK+W+ G + K S + V V N L+ T+ D ++
Sbjct: 118 RQIVSASRDRTIKLWNTLG-ECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS 600
++++ ++ GH+ + S DG S G DG + +WD+ +++ ++
Sbjct: 177 VWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSI 236
Query: 601 ITALSLSPNMDVLATAHVDQNGVYLW 626
I +L SPN L A +N + +W
Sbjct: 237 IHSLCFSPNRYWLCAA--TENSIRIW 260
Score = 121 (47.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 63/219 (28%), Positives = 97/219 (44%)
Query: 83 AHQVATWSRHSAKVNLLLLFGEHILSIDIDGNMFIWAFKGIEENLAPVGHVKLDDKFTPT 142
A + T H + +L G+ LS DG + +W E VGH K D +
Sbjct: 55 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTK--DVLSVA 112
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNI--STKKKLYEFKGWGXXXXXXXXXP-ALDVVAVG 199
T +++ S++ +++LWN K + E G P L V
Sbjct: 113 F----STDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVS 168
Query: 200 CS-DGKIHVHNVRYDEELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNL-EK 256
S D + V N++ + + HS G + +A S DG L ASG GVI +W+L E
Sbjct: 169 ASWDKTVKVWNLQNCKLRNSLVGHS--GYLNTVAVSPDGS-LCASGGKDGVILLWDLAEG 225
Query: 257 RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
++L S+ EA + I SL F N L +A+ +NSI++W
Sbjct: 226 KKLYSL--EA-GSIIHSLCFSPNRYWLCAAT-ENSIRIW 260
Score = 104 (41.7 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 39/137 (28%), Positives = 66/137 (48%)
Query: 474 NGEVVGVACD--STNTLM---ISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRV 526
+G V+C S NTL+ +SA + +KVW+ + L++ VG S L +
Sbjct: 146 DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSL-VGHSGYLNTVAVSPD 204
Query: 527 NGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
L A+ D VI L+D+ + + E + I CFS + WL ++ + S+RIWD+
Sbjct: 205 GSLCASGGKDGVILLWDLAEGKKLYSLEAGSI-IHSLCFSPNRYWLCAA-TENSIRIWDL 262
Query: 587 ILARQIDAIHVDVSITA 603
++ + VD+ A
Sbjct: 263 ESKSVVEDLKVDLKSEA 279
Score = 101 (40.6 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKR-RLQSVIRE---AHDNAIISLHFFANEPV 282
VTA+A D ++ + + I +W L K + V + H + + + ++
Sbjct: 18 VTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQF 77
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
+S S D +++W D G+ RF GH+ L + F + R I+SA +DR +L++
Sbjct: 78 ALSGSWDGELRLW--DLATGETTR-RF-VGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Query: 343 VI 344
+
Sbjct: 134 TL 135
Score = 52 (23.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 561 TDFCFSEDGKWLLSSGMDGSLRIWDV 586
T +S DG L S DG +R+W +
Sbjct: 298 TSLNWSADGSTLFSGYTDGVVRVWGI 323
>MGI|MGI:2384863 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0032040
"small-subunit processome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR013934 InterPro:IPR015943
Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2384863 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 GO:GO:0032040
HSSP:P63005 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR OMA:HHFRGSP EMBL:AK081966 EMBL:AK137554
EMBL:AK149940 EMBL:AK165125 EMBL:BC019504 IPI:IPI00124057
RefSeq:NP_663371.2 UniGene:Mm.100353 ProteinModelPortal:Q8C4J7
SMR:Q8C4J7 STRING:Q8C4J7 PhosphoSite:Q8C4J7 PaxDb:Q8C4J7
PRIDE:Q8C4J7 Ensembl:ENSMUST00000126319 GeneID:213773
KEGG:mmu:213773 UCSC:uc008axv.1 GeneTree:ENSGT00690000102183
InParanoid:Q8C4J7 NextBio:374097 Bgee:Q8C4J7 Genevestigator:Q8C4J7
Uniprot:Q8C4J7
Length = 801
Score = 140 (54.3 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ +LA S + + LLA+G+ +W L + +L V H + ++ F + VL +A
Sbjct: 482 INSLAVSPNDK-LLATGSQDRTAKLWALPQCQLLGVFT-GHRRGLWNVQFSPTDQVLATA 539
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 540 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGSQLLSSGSDGLLKLWTIKSN 595
Query: 347 QQSREL 352
+ R L
Sbjct: 596 ECVRTL 601
Score = 119 (46.9 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 43/172 (25%), Positives = 72/172 (41%)
Query: 460 GSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC--S 517
G L ++ + H+ ++ +A + L+ + K+W L + G
Sbjct: 465 GPVLLQAQTTRRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVF-TGHRRG 523
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
L + + + +LAT + D I+L+ + ++ FEGH + F G LLSSG
Sbjct: 524 LWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGSQLLSSGS 583
Query: 578 DGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
DG L++W + R +DA H D + L S D T D + LW
Sbjct: 584 DGLLKLWTIKSNECVRTLDA-HED-KVWGLHCSQLDDHAITGGSDSR-IILW 632
Score = 103 (41.3 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 43/162 (26%), Positives = 69/162 (42%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLA-SGASSGVISIWN 253
++A G DG + V ++ F S G V +AF D LL S A I +W+
Sbjct: 123 LLATGGCDGAVRVWDIVQHYGTHHFRGSP-GVVHLVAFHPDPTRLLLFSSAVDTSIRVWS 181
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW---IFDTTDGDPRLLRFR 310
L+ R +V+ AH +A+ SL F ++S+ D +W + TT P
Sbjct: 182 LQDRSCLAVLT-AHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSYQTTRTVPVFESVE 240
Query: 311 SG-----HSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
+ AP L ++ ++G H L+AG R++ Q
Sbjct: 241 ASVLLPEQPAPALGVK--SSGLHFLTAGDQGILRVWEAASGQ 280
Score = 93 (37.8 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
Identities = 31/131 (23%), Positives = 61/131 (46%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 283
V ++AF + LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 112 VASMAFDATST-LLATGGCDGAVRVWDIVQHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 168
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S++ D SI++W D L + H + + F G +LS+G+D+ +
Sbjct: 169 FSSAVDTSIRVWSLQ----DRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDK----ICI 220
Query: 344 IQDQQSRELSQ 354
+ D QS + ++
Sbjct: 221 VWDLQSYQTTR 231
Score = 91 (37.1 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 45/193 (23%), Positives = 92/193 (47%)
Query: 484 STNTLMISAGYHGDIKVWDF-KGRDLKSRWEV-GC--SLVKIVYHRVNGLLATVADDLVI 539
S+ ++AG G ++VW+ G+ + ++ ++ G L R LL TV D +
Sbjct: 257 SSGLHFLTAGDQGILRVWEAASGQCVYTQPQMPGLRQELTHCTLARAADLLLTVTADHNL 316
Query: 540 RLFDVVALRMVRKFEGHTDRITDFCF--SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIH 596
L++ +L++ ++F G+++ + D F D +++S L+++++ LA QI H
Sbjct: 317 LLYEAHSLQLQKQFAGYSEEVLDVRFLGPSDSHIVVASNSP-CLKVFELQTLACQILHGH 375
Query: 597 VDVSITALSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSV 650
D+ + AL + + A+ DQ+ + +W +N+ C+ G + S + I
Sbjct: 376 TDI-VLALDVFRKGWLFASCAKDQS-IRIWKMNKAGQVACVAQGSGHTHSVGT---ICCS 430
Query: 651 KMPSVSSVEGCQD 663
++ V G QD
Sbjct: 431 RLKESFLVTGSQD 443
Score = 81 (33.6 bits), Expect = 6.2e-06, Sum P(3) = 6.2e-06
Identities = 27/117 (23%), Positives = 51/117 (43%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGC 200
P M D + G +G++++W+I + F+G P + +
Sbjct: 111 PVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFS 170
Query: 201 S--DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLE 255
S D I V +++ D + + AVT+L+FS G +L+SG + +W+L+
Sbjct: 171 SAVDTSIRVWSLQ-DRSCLAVLTAHYSAVTSLSFSEGGHTMLSSGRDK-ICIVWDLQ 225
Score = 76 (31.8 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 53/267 (19%), Positives = 108/267 (40%)
Query: 90 SRHSAKVNLLLLFGEH-ILSIDIDGNMFIWAFKGIEEN-LAPV-----GHVKLDDKFTPT 142
+ +SA +L G H +LS D +W + + PV V L ++ P
Sbjct: 193 AHYSAVTSLSFSEGGHTMLSSGRDKICIVWDLQSYQTTRTVPVFESVEASVLLPEQPAPA 252
Query: 143 CIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLY---EFKGWGXXXXXXXXXPALDVVAVG 199
+ + L+ + G Q G L++W ++ + +Y + G A D++
Sbjct: 253 LGVK-SSGLHFLTAGDQ-GILRVWEAASGQCVYTQPQMPGLRQELTHCTLARAADLLLTV 310
Query: 200 CSDGKI---HVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
+D + H+++ ++ ++ + V L SD ++AS +S + ++ L+
Sbjct: 311 TADHNLLLYEAHSLQLQKQFAGYSEEVLD-VRFLG-PSDSHIVVAS--NSPCLKVFELQT 366
Query: 257 RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH--S 314
Q I H + +++L F + S + D SI++W + G + SGH S
Sbjct: 367 LACQ--ILHGHTDIVLALDVFRKGWLFASCAKDQSIRIWKMNKA-GQVACVAQGSGHTHS 423
Query: 315 APPLCIRFYANGRHILSAGQDRAFRLF 341
+C +++ QD +L+
Sbjct: 424 VGTICCSRLKES-FLVTGSQDCTVKLW 449
Score = 67 (28.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 30/160 (18%), Positives = 69/160 (43%)
Query: 200 CSDG-KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
C G K+++ +V L + + +T+ S D + +L + + + +++ W +
Sbjct: 41 CVCGTKVNILDVASGALLRSLEQEDQEDITSFDLSPDDE-VLVTASRALLLAQWAWREGT 99
Query: 259 LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
+ + + H + S+ F A +L + D ++++W G FR L
Sbjct: 100 VTRLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHH---FRGSPGVVHL 156
Query: 319 CIRFYANGRHIL--SAGQDRAFRLFSVIQDQQSRELSQRH 356
+ F+ + +L S+ D + R++S +QD+ + H
Sbjct: 157 -VAFHPDPTRLLLFSSAVDTSIRVWS-LQDRSCLAVLTAH 194
Score = 38 (18.4 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 811 IIDHDDHQELDKRPEYLSIELLLDYLIHE 839
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVIKQQELDNLLHE 663
>RGD|1305142 [details] [associations]
symbol:Tbl3 "transducin (beta)-like 3" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1305142 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006364 GO:GO:0032040 HSSP:P63005 CTD:10607
HOGENOM:HOG000188765 HOVERGEN:HBG058869 KO:K14555 OrthoDB:EOG42JNQR
GeneTree:ENSGT00690000102183 EMBL:BC085837 IPI:IPI00369236
RefSeq:NP_001008278.1 UniGene:Rn.32013 ProteinModelPortal:Q5U2W5
STRING:Q5U2W5 PRIDE:Q5U2W5 Ensembl:ENSRNOT00000018405 GeneID:287120
KEGG:rno:287120 UCSC:RGD:1305142 InParanoid:Q5U2W5 NextBio:625544
Genevestigator:Q5U2W5 Uniprot:Q5U2W5
Length = 800
Score = 143 (55.4 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 44/155 (28%), Positives = 69/155 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHR--VNGL 529
H V +A D+T+TL+ + G G ++VWD + +V +V +H L
Sbjct: 108 HTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLL 167
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
L + A D IR++ + + H +T FSEDG +LSSG D +WD+
Sbjct: 168 LFSSAVDTSIRVWSLQDRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSY 227
Query: 590 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVY 624
+ V S+ A L P LA V +G++
Sbjct: 228 ETSRTVPVFESVEASVLLPEEPALALG-VKNSGLH 261
Score = 141 (54.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 37/126 (29%), Positives = 64/126 (50%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ +LA S + + LLA+G+ +W L + +L V H + ++ F + VL +A
Sbjct: 482 INSLAVSPNDK-LLATGSQDRTAKLWALPQCQLLGVF-SGHRRGLWNVQFSPTDQVLATA 539
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
SAD +IK+W D L+ GH A L + F + G +LS+G D +L+++ +
Sbjct: 540 SADGTIKLWALQ----DFSCLKTFEGHDASVLKVAFVSRGAQLLSSGSDGLLKLWTIKSN 595
Query: 347 QQSREL 352
+ R L
Sbjct: 596 ECVRTL 601
Score = 116 (45.9 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 43/174 (24%), Positives = 72/174 (41%)
Query: 458 SRGSYLDMSERSNY-AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC 516
S G + + +S H+ ++ +A + L+ + K+W L +
Sbjct: 462 SDGDLIPLQAQSTQRCHDKDINSLAVSPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHR 521
Query: 517 -SLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSS 575
L + + + +LAT + D I+L+ + ++ FEGH + F G LLSS
Sbjct: 522 RGLWNVQFSPTDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGAQLLSS 581
Query: 576 GMDGSLRIWDVI---LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
G DG L++W + R +DA H D + L S D T D + LW
Sbjct: 582 GSDGLLKLWTIKSNECVRTLDA-HED-KVWGLHCSRLDDHAITGGSDSR-IILW 632
Score = 106 (42.4 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 41/160 (25%), Positives = 69/160 (43%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLA-SGASSGVISIWN 253
++A G DG + V ++ F S G V +AF D LL S A I +W+
Sbjct: 123 LLATGGCDGAVRVWDIVQHYGTHHFRGSP-GVVHLVAFHPDPTRLLLFSSAVDTSIRVWS 181
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
L+ R +V+ AH +A+ SL F + ++S+ D +W + + + F S
Sbjct: 182 LQDRSCLAVLT-AHYSAVTSLSFSEDGHTMLSSGRDKICIVWDLRSYETSRTVPVFESVE 240
Query: 314 SA------PPLCIRFYANGRHILSAGQDRAFRLFSVIQDQ 347
++ P L + +G H L+AG R++ Q
Sbjct: 241 ASVLLPEEPALALGVKNSGLHFLTAGDQGILRVWEAASGQ 280
Score = 98 (39.6 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 43/186 (23%), Positives = 90/186 (48%)
Query: 490 ISAGYHGDIKVWDF-KGRDLKSRWEV-GC--SLVKIVYHRVNGLLATVADDLVIRLFDVV 545
++AG G ++VW+ G+ + ++ ++ G L R GLL TV D + L++
Sbjct: 263 LTAGDQGILRVWEAASGQCVYTQPQMSGLRQELTHCTLARAAGLLLTVTADHNLLLYEAR 322
Query: 546 ALRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMDGSLRIWDV-ILARQIDAIHVDVSITA 603
+L++ ++F G+++ + D F + ++ + L+++++ LA QI H D+ + A
Sbjct: 323 SLQLQKQFAGYSEEVLDVRFLGPNDSHIIVASNSPCLKVFELQTLACQILHGHTDI-VLA 381
Query: 604 LSLSPNMDVLATAHVDQNGVYLW-VNR-----CMFSGDSNIDSYASGKEIVSVKMPSVSS 657
L + + A+ DQ+ + +W +N+ C+ G + S + I ++
Sbjct: 382 LDVFRKGWLFASCAKDQS-IRIWRMNKAGQVACVAQGSGHTHSVGT---ICCSRLKESFL 437
Query: 658 VEGCQD 663
V G QD
Sbjct: 438 VTGSQD 443
Score = 96 (38.9 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
Identities = 32/131 (24%), Positives = 62/131 (47%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEP---VL 283
V ++AF + LLA+G G + +W++ + R + ++ L F +P +L
Sbjct: 112 VASMAFDATST-LLATGGCDGAVRVWDIVQHYGTHHFRGSP--GVVHLVAFHPDPTRLLL 168
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S++ D SI++W D L + H + + F +G +LS+G+D+ +
Sbjct: 169 FSSAVDTSIRVWSLQ----DRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDK----ICI 220
Query: 344 IQDQQSRELSQ 354
+ D +S E S+
Sbjct: 221 VWDLRSYETSR 231
Score = 89 (36.4 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 39/170 (22%), Positives = 70/170 (41%)
Query: 141 PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGC 200
P M D + G +G++++W+I + F+G P + +
Sbjct: 111 PVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHHFRGSPGVVHLVAFHPDPTRLLLFS 170
Query: 201 S--DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
S D I V +++ D + + AVT+L+FS DG +L+SG + +W+L
Sbjct: 171 SAVDTSIRVWSLQ-DRSCLAVLTAHYSAVTSLSFSEDGHTMLSSGRDK-ICIVWDLRSYE 228
Query: 259 LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLR 308
+ ++ S+ EP L + NS ++ T GD +LR
Sbjct: 229 TSRTV-PVFESVEASV-LLPEEPAL-ALGVKNSGLHFL---TAGDQGILR 272
Score = 71 (30.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 30/160 (18%), Positives = 70/160 (43%)
Query: 200 CSDG-KIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRR 258
C G K+++ +V + + + + +TA S D + +L + + + +++ W +
Sbjct: 41 CVCGTKVNILDVASGDLIRSLEQEDQEDITAFDLSPDDE-VLVTASRALLLAQWAWREGT 99
Query: 259 LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL 318
+ + + H + S+ F A +L + D ++++W G FR L
Sbjct: 100 VARLWKAIHTAPVASMAFDATSTLLATGGCDGAVRVWDIVQHYGTHH---FRGSPGVVHL 156
Query: 319 CIRFYANGRHIL--SAGQDRAFRLFSVIQDQQSRELSQRH 356
+ F+ + +L S+ D + R++S +QD+ + H
Sbjct: 157 -VAFHPDPTRLLLFSSAVDTSIRVWS-LQDRSCLAVLTAH 194
Score = 38 (18.4 bits), Expect = 4.1e-08, Sum P(3) = 4.1e-08
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 811 IIDHDDHQELDKRPEYLSIELLLDYLIHE 839
+ + + +E KR E + + LD L+HE
Sbjct: 635 VTEAEQAEEQAKREEQVIKQQELDNLLHE 663
>FB|FBgn0004623 [details] [associations]
symbol:Gbeta76C "G protein beta-subunit 76C" species:7227
"Drosophila melanogaster" [GO:0016059 "deactivation of rhodopsin
mediated signaling" evidence=IMP;TAS] [GO:0016056 "rhodopsin
mediated signaling pathway" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=NAS;IMP] [GO:0007602 "phototransduction"
evidence=IDA;IMP] [GO:0016028 "rhabdomere" evidence=IDA;TAS]
[GO:0005834 "heterotrimeric G-protein complex"
evidence=NAS;IDA;IPI] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=NAS] [GO:0007202 "activation of
phospholipase C activity" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007601
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0007202 GO:GO:0016028 GO:GO:0016056
PRINTS:PR00319 GO:GO:0016059 GO:GO:0005834
GeneTree:ENSGT00550000074331 InterPro:IPR016346 PIRSF:PIRSF002394
KO:K07972 EMBL:M76593 EMBL:AY118886 PIR:JU0269 RefSeq:NP_523720.2
UniGene:Dm.9760 ProteinModelPortal:P29829 SMR:P29829 IntAct:P29829
MINT:MINT-938155 STRING:P29829 PaxDb:P29829
EnsemblMetazoa:FBtr0074949 GeneID:40148 KEGG:dme:Dmel_CG8770
CTD:40148 FlyBase:FBgn0004623 InParanoid:P29829 OMA:KGHINKV
OrthoDB:EOG4SJ3W9 PhylomeDB:P29829 ChiTaRS:Gbeta76C
GenomeRNAi:40148 NextBio:817248 Bgee:P29829 GermOnline:CG8770
Uniprot:P29829
Length = 346
Score = 138 (53.6 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 40/161 (24%), Positives = 73/161 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVG--CSLVKIVYHRVNGLL 530
H G++ G++ I+ K+WD + K + G + + YH
Sbjct: 189 HAGDIAGLSLSPDMKTYITGSVDKTAKLWDVREEGHKQMF-FGHDMDVSSVCYHPSGFGF 247
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDR--ITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
A+ ++D R++D+ A + + ++E T S G++L+ G++G++ WD +
Sbjct: 248 ASCSEDQTARMYDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMK 307
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLWV 627
R + H + IT +SL PN LA+ DQ V LW+
Sbjct: 308 QRHTGTLSGHEN-RITCISLCPNGMCLASTSWDQQ-VRLWL 346
Score = 124 (48.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 44/199 (22%), Positives = 84/199 (42%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ GS +G L +W+ T K+ P+ + VA G D + V++V +
Sbjct: 75 VTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVNNRD 134
Query: 215 -----ELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDN 269
++V G +++ F DG L +G+ I W+LEK ++++ H
Sbjct: 135 ASGVAKMVKELMGYEGFLSSCRFLDDGH--LITGSGDMKICHWDLEKG-VKTMDFNGHAG 191
Query: 270 AIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHI 329
I L + ++ S D + K+W D + + + F GH + ++ +G
Sbjct: 192 DIAGLSLSPDMKTYITGSVDKTAKLW--DVREEGHKQMFF--GHDMDVSSVCYHPSGFGF 247
Query: 330 LSAGQDRAFRLFSVIQDQQ 348
S +D+ R++ + DQQ
Sbjct: 248 ASCSEDQTARMYDLRADQQ 266
Score = 65 (27.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 253 NLEKRRLQSV-IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDT-TDGDPRLLRFR 310
++ K R S I + H N + S+HF + ++ S D + +W DT T +++ R
Sbjct: 43 DVPKIRFSSKKILKGHINKVNSVHFAGDSRHCVTGSLDGKLIIW--DTWTANKVQIIPLR 100
Query: 311 SGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
S A + + F +G + G D ++ V
Sbjct: 101 S---AWVMTVAFSPSGNFVACGGMDNQCTVYDV 130
Score = 42 (19.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 19/109 (17%), Positives = 42/109 (38%)
Query: 394 TCHMD-TAQAYVWRLQNFVLGEHILRPCPENPTAVKACTISACGNFAVLGTAGGWIERFN 452
+C D TA+ Y R + ++ P P+ T +C +S G + + G G + ++
Sbjct: 249 SCSEDQTARMYDLRADQQI-AQY--EP-PQKNTGFTSCALSTSGRYLMCGGIEGNVHSWD 304
Query: 453 LQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
G+ +S H + ++ + S + +++W
Sbjct: 305 TMKQRHTGT---LS-----GHENRITCISLCPNGMCLASTSWDQQVRLW 345
>WB|WBGene00004265 [details] [associations]
symbol:qui-1 species:6239 "Caenorhabditis elegans"
[GO:0050913 "sensory perception of bitter taste" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 HSSP:P16649
GO:GO:0050913 GeneTree:ENSGT00700000104282 EMBL:AL021487 PIR:T26919
RefSeq:NP_502613.2 ProteinModelPortal:O62471 SMR:O62471
STRING:O62471 PaxDb:O62471 EnsemblMetazoa:Y45F10B.10 GeneID:178326
KEGG:cel:CELE_Y45F10B.10 UCSC:Y45F10B.10 CTD:178326
WormBase:Y45F10B.10a HOGENOM:HOG000016418 InParanoid:O62471
OMA:MARDSEQ NextBio:900668 Uniprot:O62471
Length = 1592
Score = 133 (51.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 46/201 (22%), Positives = 86/201 (42%)
Query: 154 VIVGSQE--GSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVR 211
+I G+Q G + ++I++++ + FKG + D ++V
Sbjct: 882 LISGNQSDPGVIYAYHIASEQLIGTFKGHTAAVTCLCSSNDSSLFVSTSFDKTVNVWVFS 941
Query: 212 YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAI 271
++ TH VT +SD Q L+ + A S I LE + + H ++
Sbjct: 942 QSTPTMSLTHHT-AKVTCAILTSDDQYLITASADSSAKMI-KLETGEVMRSFND-HTGSV 998
Query: 272 ISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILS 331
+SL +N L++ S D ++MW D T+G + + G AP + +N ++
Sbjct: 999 VSLQLTSNNQFLITGSGDFVVQMW--DVTNG--KCISRMGGLMAPVSTLAITSNDAFVVV 1054
Query: 332 AGQDRAFRLFSVIQDQQSREL 352
A +D ++FS + Q+ EL
Sbjct: 1055 ACEDETLKVFSTVGGQELHEL 1075
Score = 88 (36.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 21/97 (21%), Positives = 49/97 (50%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILA 589
+AT + D+ ++++ + + + GH + +T C S D + ++S D + +W+V
Sbjct: 1351 IATGSRDMSLKIWQIDKGFLTQVLVGHENVVTCCCISFDERLVVSGARDEKIIVWNVQSG 1410
Query: 590 RQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ ++ +IT+LS++ + V+ + D V W
Sbjct: 1411 DMVCTVNTTAAITSLSMTGDSTVVFSTTED-GWVETW 1446
Score = 80 (33.2 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 44/199 (22%), Positives = 87/199 (43%)
Query: 468 RSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVN 527
R + H+ EV+ + + MIS G + +W+ G D V + ++
Sbjct: 1243 RELFMHSSEVLSIM-SLVHNKMISCDIQGKMVIWELFGDDDTPEM-VATGVKPPIFVPPT 1300
Query: 528 GLL----ATVAD-DLVIRLFDVVALRMVRKFEGHTDRITDFCFS-EDGKWLLSSGMDGSL 581
G + ++++ ++ I F + R H+D IT F S + G ++ + D SL
Sbjct: 1301 GRIMVGHCSLSNKEMKIWAFPEEGPPVTRAKLSHSDEITCFATSPKGGNFIATGSRDMSL 1360
Query: 582 RIWDVI--LARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLWVNRCMFSGDSNID 639
+IW + Q+ H +V +T +S + ++ + D+ + +W N + SGD +
Sbjct: 1361 KIWQIDKGFLTQVLVGHENV-VTCCCISFDERLVVSGARDEK-IIVW-N--VQSGDM-VC 1414
Query: 640 SYASGKEIVSVKMPSVSSV 658
+ + I S+ M S+V
Sbjct: 1415 TVNTTAAITSLSMTGDSTV 1433
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 118 (46.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 49/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHTGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSASRDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
Score = 47 (21.6 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WD+
Sbjct: 308 GPFLLSGSRDKTIKMWDI 325
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 57/235 (24%), Positives = 100/235 (42%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I L PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D +++++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+V H ++SL + +S + D SIK
Sbjct: 153 DDNQIITSSGDTT--CALWDIETGQ-QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D D R GH + + F+ NG + D RLF + DQ+
Sbjct: 210 LW--DVRDSMCRQTFI--GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 260
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ G+ + S++LW++ F G P G D + ++R D+
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ 259
Query: 215 ELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
EL+ ++H ++ +T++AFS G+ LLA G +IW+ K V+ HDN +
Sbjct: 260 ELLMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNIWDAMKGDRAGVLA-GHDNRVSC 317
Query: 274 LHFFANEPVLMSASADNSIKMW 295
L + + + S D+ +K+W
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H+G+V+ ++ +S IK+WD + + + S + V NG T
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 533 V-ADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
+DD RLFD+ A + + + H + IT FS G+ LL+ D + IWD +
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GDRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNFVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF + + I S+G D L+ +
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 57/235 (24%), Positives = 100/235 (42%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I L PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D +++++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+V H ++SL + +S + D SIK
Sbjct: 153 DDNQIITSSGDTT--CALWDIETGQ-QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D D R GH + + F+ NG + D RLF + DQ+
Sbjct: 210 LW--DVRDSMCRQTFI--GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 260
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ G+ + S++LW++ F G P G D + ++R D+
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ 259
Query: 215 ELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
EL+ ++H ++ +T++AFS G+ LLA G +IW+ K V+ HDN +
Sbjct: 260 ELLMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNIWDAMKGDRAGVLA-GHDNRVSC 317
Query: 274 LHFFANEPVLMSASADNSIKMW 295
L + + + S D+ +K+W
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H+G+V+ ++ +S IK+WD + + + S + V NG T
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 533 V-ADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
+DD RLFD+ A + + + H + IT FS G+ LL+ D + IWD +
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GDRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNFVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF + + I S+G D L+ +
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 57/235 (24%), Positives = 100/235 (42%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I L PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D +++++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+V H ++SL + +S + D SIK
Sbjct: 153 DDNQIITSSGDTT--CALWDIETGQ-QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D D R GH + + F+ NG + D RLF + DQ+
Sbjct: 210 LW--DVRDSMCRQTFI--GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 260
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ G+ + S++LW++ F G P G D + ++R D+
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ 259
Query: 215 ELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
EL+ ++H ++ +T++AFS G+ LLA G +IW+ K V+ HDN +
Sbjct: 260 ELLMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNIWDAMKGDRAGVLA-GHDNRVSC 317
Query: 274 LHFFANEPVLMSASADNSIKMW 295
L + + + S D+ +K+W
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H+G+V+ ++ +S IK+WD + + + S + V NG T
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 533 V-ADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
+DD RLFD+ A + + + H + IT FS G+ LL+ D + IWD +
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GDRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNFVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF + + I S+G D L+ +
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 57/235 (24%), Positives = 100/235 (42%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I L PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D +++++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+V H ++SL + +S + D SIK
Sbjct: 153 DDNQIITSSGDTT--CALWDIETGQ-QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D D R GH + + F+ NG + D RLF + DQ+
Sbjct: 210 LW--DVRDSMCRQTFI--GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 260
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ G+ + S++LW++ F G P G D + ++R D+
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ 259
Query: 215 ELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
EL+ ++H ++ +T++AFS G+ LLA G +IW+ K V+ HDN +
Sbjct: 260 ELLMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNIWDAMKGDRAGVLA-GHDNRVSC 317
Query: 274 LHFFANEPVLMSASADNSIKMW 295
L + + + S D+ +K+W
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H+G+V+ ++ +S IK+WD + + + S + V NG T
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 533 V-ADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
+DD RLFD+ A + + + H + IT FS G+ LL+ D + IWD +
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GDRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNFVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF + + I S+G D L+ +
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 57/235 (24%), Positives = 100/235 (42%)
Query: 123 IEENLAPVGHVKLDDKFT------PTCIMHPDTYLNKVIVGSQEGSLQLWNISTKKKLYE 176
I L PVG +++ + T MH T ++ SQ+G L +W+ T K++
Sbjct: 33 ITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALA---FS 233
P+ + VA G D +++++ E V + + G L+ F
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFL 152
Query: 234 SDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIK 293
D Q + +SG ++ ++W++E + Q+V H ++SL + +S + D SIK
Sbjct: 153 DDNQIITSSGDTT--CALWDIETGQ-QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIK 209
Query: 294 MWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQDQQ 348
+W D D R GH + + F+ NG + D RLF + DQ+
Sbjct: 210 LW--DVRDSMCRQTFI--GHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 260
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ G+ + S++LW++ F G P G D + ++R D+
Sbjct: 200 VSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ 259
Query: 215 ELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
EL+ ++H ++ +T++AFS G+ LLA G +IW+ K V+ HDN +
Sbjct: 260 ELLMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNIWDAMKGDRAGVLA-GHDNRVSC 317
Query: 274 LHFFANEPVLMSASADNSIKMW 295
L + + + S D+ +K+W
Sbjct: 318 LGVTDDGMAVATGSWDSFLKIW 339
Score = 105 (42.0 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H+G+V+ ++ +S IK+WD + + + S + V NG T
Sbjct: 183 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 242
Query: 533 V-ADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
+DD RLFD+ A + + + H + IT FS G+ LL+ D + IWD +
Sbjct: 243 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 301
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 302 GDRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 339
Score = 80 (33.2 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 58 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNFVACG 115
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF + + I S+G D L+ +
Sbjct: 116 GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETG 174
Query: 347 QQS 349
QQ+
Sbjct: 175 QQT 177
>UNIPROTKB|Q9W5Z5 [details] [associations]
symbol:wsb1 "WD repeat and SOCS box-containing protein 1"
species:31033 "Takifugu rubripes" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001496 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF07525 PROSITE:PS50082 PROSITE:PS50225
PROSITE:PS50294 SMART:SM00253 SMART:SM00320 SMART:SM00969
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0035556 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016567 GO:GO:0005622
CTD:26118 OrthoDB:EOG40ZQXJ EMBL:AF157597 EMBL:AF064564
RefSeq:NP_001027919.1 UniGene:Tru.1848 ProteinModelPortal:Q9W5Z5
STRING:Q9W5Z5 GeneID:445931 KEGG:tru:445931 InParanoid:Q9W5Z5
Uniprot:Q9W5Z5
Length = 427
Score = 159 (61.0 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 56/202 (27%), Positives = 86/202 (42%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS-DGKIHVHNVRYDEE 215
G G +++W++ T L P ++ V S D K+ V +++ D
Sbjct: 151 GLNNGRIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGN 210
Query: 216 LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLH 275
+V V + AFS D L + GAS V+ +WN++K L + E H N ++S
Sbjct: 211 MVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVL-LWNMDKYTLIRKL-EGHHNDVVSCE 268
Query: 276 FFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP--------------LCIR 321
F + +L +AS D + +W D G LL GH PP +
Sbjct: 269 FSPDGALLATASYDTRVIVW--DHQRGSI-LLEL--GHLFPPPSPIFAGGANDRWVRSVS 323
Query: 322 FYANGRHILSAGQDRAFRLFSV 343
F A+GRHI S DR R +S+
Sbjct: 324 FCADGRHIASVSDDRLVRFWSI 345
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 55/213 (25%), Positives = 97/213 (45%)
Query: 423 NPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMS--ERSNYAHNGEVVGV 480
NPT+ + + +C +V+ AG E GI G S E+ + + N E
Sbjct: 80 NPTSPRHLSRQSCKGGSVIPMAGAPPEHTIDCGGIVWGMAFGSSVPEKQSRSINIEWHHF 139
Query: 481 ACDSTNTLMISAGYHGDIKVWD-FKGRDLKSRWEVGCSLVKIVYHRVNG--LLATVADDL 537
L+ + +G IK+WD + G L + + +V+ + +G +L + + D
Sbjct: 140 QFGRDQLLLATGLNNGRIKIWDVYTGTLLLNLMD-HTDIVRDLTFAPDGSLMLVSASTDK 198
Query: 538 VIRLFDVVAL-RMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV---ILARQID 593
+R++D+ MV+ GH +R+ FS D L S G ++ +W++ L R+++
Sbjct: 199 KLRVWDLKDDGNMVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYTLIRKLE 258
Query: 594 AIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
H DV + SP+ +LATA D V +W
Sbjct: 259 GHHNDV--VSCEFSPDGALLATASYDTR-VIVW 288
Score = 113 (44.8 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 34/141 (24%), Positives = 61/141 (43%)
Query: 195 VVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNL 254
++A G ++G+I + +V Y L+ V L F+ DG +L S ++ + +W+L
Sbjct: 147 LLATGLNNGRIKIWDV-YTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDL 205
Query: 255 EKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+ + H N + S F + VL S A ++ +W D L+R GH
Sbjct: 206 KDDGNMVKVLWGHPNRVYSSAFSPDSSVLCSVGASKAVLLWNMDKYT----LIRKLEGHH 261
Query: 315 APPLCIRFYANGRHILSAGQD 335
+ F +G + +A D
Sbjct: 262 NDVVSCEFSPDGALLATASYD 282
Score = 54 (24.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 30/129 (23%), Positives = 51/129 (39%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEV----------GCS--LV 519
H+ +VV L+ +A Y + VWD +G L + G + V
Sbjct: 260 HHNDVVSCEFSPDGALLATASYDTRVIVWDHQRGSILLELGHLFPPPSPIFAGGANDRWV 319
Query: 520 KIVYHRVNGL-LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFC--FSEDGKWLLSSG 576
+ V +G +A+V+DD ++R + + R + C FS G L +
Sbjct: 320 RSVSFCADGRHIASVSDDRLVRFWSIEE----RAPQAVASLPNGLCCAFSTTGSVLAAGT 375
Query: 577 MDGSLRIWD 585
DGS+ W+
Sbjct: 376 CDGSVHFWE 384
>DICTYBASE|DDB_G0288659 [details] [associations]
symbol:wdr18 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0288659 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GenomeReviews:CM000154_GR EMBL:AAFI02000119 KO:K14829 OMA:KLYIWEL
RefSeq:XP_636608.1 ProteinModelPortal:Q54IM3
EnsemblProtists:DDB0233986 GeneID:8626736 KEGG:ddi:DDB_G0288659
InParanoid:Q54IM3 ProtClustDB:CLSZ2728833 Uniprot:Q54IM3
Length = 560
Score = 109 (43.4 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 52/235 (22%), Positives = 94/235 (40%)
Query: 125 ENLAPVGHVKLDDKFTPTCIMHPD--TYLNKV------IVGSQEGSLQLWNISTKKKLYE 176
+ + + HVKL D T H T L+ + I ++ SL ++++ +
Sbjct: 8 KRVVKIKHVKLSDATTDEQ-QHKKNTTSLSNITSEVIAITSKEDSSLFIYDLRNGNLIAT 66
Query: 177 FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV-TFTHSMRGAVTALAFSSD 235
F + + I+++N + D+ + T G + SSD
Sbjct: 67 FNNTNNDTNGFCTIGSEYFATSQANKAMINIYNWKKDQPIYKTPIQEKSGPICC---SSD 123
Query: 236 GQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
G L G++SG++ +W + L + EAH N I + F ++ +++A D I W
Sbjct: 124 GN-YLVMGSASGMVYLWEVSTGTLLRMW-EAHYNKISCITFTKDDFYIITAGDDGIINCW 181
Query: 296 IFDTT-DGDPRLLRFR---SGHSA--PPLCIRFYANGRHILSAGQDRAFRLFSVI 344
F+ D D LLR R S HS + F + S DR +++ ++
Sbjct: 182 SFEQCLDRDVSLLRARNSFSDHSLGITSIVCSFGGCNSRLFSVSLDRTCKIWDLV 236
Score = 102 (41.0 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 551 RKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNM 610
+ F GHT IT S DG L+S +DG+ IWD + + +I + + SLS M
Sbjct: 324 KTFNGHTKAITSISLSMDGSLLISGSIDGNCNIWDTFSRQIVRSIANTIKGSISSLSVLM 383
Query: 611 DVLATAHVDQNG 622
+ + + + + NG
Sbjct: 384 NPIDSLNFNVNG 395
Score = 76 (31.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 36/156 (23%), Positives = 69/156 (44%)
Query: 194 DVVAVGCS-DGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLA-SGASSGVISI 251
+V+A+ D + ++++R + TF ++ F + G A S A+ +I+I
Sbjct: 41 EVIAITSKEDSSLFIYDLRNGNLIATFNNTNNDTN---GFCTIGSEYFATSQANKAMINI 97
Query: 252 WNLEKRR--LQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRF 309
+N +K + ++ I+E S ++ L+ SA + +W + + G LLR
Sbjct: 98 YNWKKDQPIYKTPIQEKSGPICCS----SDGNYLVMGSASGMVYLW--EVSTGT--LLRM 149
Query: 310 RSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQ 345
H CI F + +I++AG D +S Q
Sbjct: 150 WEAHYNKISCITFTKDDFYIITAGDDGIINCWSFEQ 185
>TAIR|locus:2116194 [details] [associations]
symbol:AT4G34380 "AT4G34380" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AL035521 EMBL:AL161585
HOGENOM:HOG000236376 ProtClustDB:CLSN2681936 EMBL:BT005888
EMBL:AK118385 IPI:IPI00526524 PIR:T04784 RefSeq:NP_195164.1
UniGene:At.31507 ProteinModelPortal:Q9SZ03 SMR:Q9SZ03 IntAct:Q9SZ03
STRING:Q9SZ03 EnsemblPlants:AT4G34380.1 GeneID:829588
KEGG:ath:AT4G34380 TAIR:At4g34380 InParanoid:Q9SZ03 OMA:VEEERAC
PhylomeDB:Q9SZ03 Genevestigator:Q9SZ03 Uniprot:Q9SZ03
Length = 495
Score = 148 (57.2 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 46/178 (25%), Positives = 75/178 (42%)
Query: 148 DTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHV 207
D L + S + ++++W I+ K L D+V G +DG + V
Sbjct: 244 DVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFD-DLVFTGSADGTVKV 302
Query: 208 HNVRYDEE-----LVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV 262
+ L AVTALA S ++ G+S G+++ W KR
Sbjct: 303 WKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSS-IVYCGSSDGLVNYWERSKRSFTGG 361
Query: 263 IREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCI 320
I + H +A++ L N +L+S SAD +I +W D +D + L +GH P C+
Sbjct: 362 ILKGHKSAVLCLGIAGN--LLLSGSADKNICVWRRDPSDKSHQCLSVLTGHMGPVKCL 417
Score = 62 (26.9 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 23/87 (26%), Positives = 42/87 (48%)
Query: 35 GKAFHIYNCAKLNLVLVGPQLPKK--IRALASYRDYTFAAYGN-HIAVVKRAHQVATWSR 91
G F+ N + N L+G + K+ I +LA+ D + + +I V K + A +
Sbjct: 103 GADFNEDNVLETN-GLIGSIVRKEGHIYSLAASGDLLYTGSDSKNIRVWKNLKEHAGFKS 161
Query: 92 HSAKVNLLLLFGEHILSIDIDGNMFIW 118
S + +++FG+ I + DG + IW
Sbjct: 162 SSGLIKAIVIFGDRIFTGHQDGKIRIW 188
Score = 39 (18.8 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
E H G VA ++ S +KVW
Sbjct: 420 EEERACHQGAKASVAEGDRKWIIYSGSLDKSVKVW 454
>UNIPROTKB|E2RH42 [details] [associations]
symbol:TEP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003723
GO:GO:0030529 InterPro:IPR007111 PROSITE:PS50837
GeneTree:ENSGT00690000102183 OMA:SVPDAWK InterPro:IPR025139
InterPro:IPR008850 Pfam:PF13271 Pfam:PF05386 PROSITE:PS51226
EMBL:AAEX03009827 EMBL:AAEX03009828 EMBL:AAEX03009829
Ensembl:ENSCAFT00000008693 Uniprot:E2RH42
Length = 2602
Score = 125 (49.1 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 64/223 (28%), Positives = 95/223 (42%)
Query: 421 PENPTAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSY-LDMSERSN-----YAHN 474
P+ P + C+ AC + V G A W L S S GS L ER H
Sbjct: 2071 PQGPVVI--CSFLACHHDWVTGCA--WTRDNLLVSCSSDGSVGLWDPERQQRLGLFLGHQ 2126
Query: 475 GEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS-RWEVG-CSLVKIVYH-RVNG--- 528
V VA + + ++S G G +KVWD +G +L S G S + R G
Sbjct: 2127 SAVSAVA--AVDAHVVSVGRDGTLKVWDHRGVELTSIPAHSGPISQCAVALEPRAAGQPG 2184
Query: 529 ---LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
L+ATV D RL+ + + GH+ I+ SE LL++ DGS+R+W
Sbjct: 2185 SELLVATVGLDGATRLWHPLLVSQTHTLLGHSGPISAAAVSEASGLLLTASEDGSVRLWQ 2244
Query: 586 VIL-ARQIDAIHVDVSITALSLSPNMDVLATAHVDQNG-VYLW 626
V A A ++ A++ +P+ V A+ + G + LW
Sbjct: 2245 VPEEADDTCAPRSPATVAAVAWAPDGSVAASG--SRTGELTLW 2285
Score = 103 (41.3 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 51/204 (25%), Positives = 83/204 (40%)
Query: 153 KVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXX--XXXPALDVVAVGCSDGKIHVHNV 210
+++ ++G +Q+W+ +L G P D VAVG + I + V
Sbjct: 1876 QLVTAGEDGEVQVWS-GALGRLRGLLGPLPLSAALCVALSPDGDWVAVGYREDGIRTYEV 1934
Query: 211 RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSV-IREAHDN 269
V ++ AV AL + S G L SGA G + W LE R L+ + +
Sbjct: 1935 ASGSWEVR-CGAVAAAVWALVWLSPGA--LVSGAEDGSLQGWVLEARSLRPLWLLPGRQG 1991
Query: 270 AIISLHFFANEPVLMSASADNSIKMW-----IFDTTDGD-PRLLRFRSGHSAPPLCIRFY 323
+ L + E +L S S +++W + + D PR R H P C F
Sbjct: 1992 PVWGLAV-SGE-LLASTSEALPVRLWPRQPLMLPLQEADFPRGAELRE-HQGPVSCCGFS 2048
Query: 324 ANGRHILSAGQDRAFRLFSVIQDQ 347
A+G + + G+DR + V + Q
Sbjct: 2049 ADGGRLATGGRDRNLFCWDVRKPQ 2072
Score = 100 (40.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 37/139 (26%), Positives = 67/139 (48%)
Query: 197 AVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEK 256
AVG +DG +++ ++R +E + G V++ AF S L A G++ +W+L++
Sbjct: 1670 AVGTADGMVYLLDLRTWQEEKSLVSGCDG-VSSCAFLSASALFLT--AFDGLLELWDLQQ 1726
Query: 257 --RRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
R LQ+ AH + I + +L + +K+W DT G L F+ +
Sbjct: 1727 GCRVLQT---SAHQSQITGCCLSPDCRLLATVCLGGCLKLW--DTARGQ---LAFQHTCA 1778
Query: 315 APPLCIRFYANGRHILSAG 333
P C F+ +G H+++ G
Sbjct: 1779 RPLNCAAFHPDG-HVVAVG 1796
Score = 98 (39.6 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 33/118 (27%), Positives = 50/118 (42%)
Query: 146 HPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKI 205
HPD ++ V VGS G+ + + E G VVAVG DG +
Sbjct: 1787 HPDGHV--VAVGSWAGTCSFFGVDGLTAAKELGAPGASVRALAFRAPGRVVAVGRLDGTV 1844
Query: 206 HVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVI 263
+ + R L TF + RG V A DG L+ +G G + +W+ RL+ ++
Sbjct: 1845 ELWSWREGVRLATFP-AHRGVVVAALPLQDGCQLVTAG-EDGEVQVWSGALGRLRGLL 1900
Score = 80 (33.2 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 40/156 (25%), Positives = 65/156 (41%)
Query: 143 CIMHPDT-YLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCS 201
C + PD L V +G G L+LW+ + + ++ P VVAVG
Sbjct: 1743 CCLSPDCRLLATVCLG---GCLKLWDTARGQLAFQHT-CARPLNCAAFHPDGHVVAVGSW 1798
Query: 202 DGKIHVHNVRYDEELVTFTHSMRGA-VTALAFSSDGQPLLASGASSGVISIWNL-EKRRL 259
G V D GA V ALAF + G+ ++A G G + +W+ E RL
Sbjct: 1799 AGTCSFFGV--DGLTAAKELGAPGASVRALAFRAPGR-VVAVGRLDGTVELWSWREGVRL 1855
Query: 260 QSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
+ AH +++ + L++A D +++W
Sbjct: 1856 ATF--PAHRGVVVAALPLQDGCQLVTAGEDGEVQVW 1889
Score = 38 (18.4 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 63 ASYRDYTFAAYGNHIAVVKRAHQVATWS 90
AS R F A G +AV + V WS
Sbjct: 1821 ASVRALAFRAPGRVVAVGRLDGTVELWS 1848
>UNIPROTKB|Q9H6Y2 [details] [associations]
symbol:WDR55 "WD repeat-containing protein 55" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0006364 "rRNA processing" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0006364 EMBL:AC116353 OMA:EDSMAQE CTD:54853
HOGENOM:HOG000242496 HOVERGEN:HBG054778 OrthoDB:EOG41C6WQ
InterPro:IPR017422 PIRSF:PIRSF038169 EMBL:AK000202 EMBL:AK025355
EMBL:BC068485 IPI:IPI00302990 IPI:IPI00929643 RefSeq:NP_060176.2
UniGene:Hs.286261 ProteinModelPortal:Q9H6Y2 SMR:Q9H6Y2
IntAct:Q9H6Y2 PhosphoSite:Q9H6Y2 DMDM:296453035 PaxDb:Q9H6Y2
PRIDE:Q9H6Y2 Ensembl:ENST00000358337 GeneID:54853 KEGG:hsa:54853
UCSC:uc003lgr.4 GeneCards:GC05P140044 HGNC:HGNC:25971
neXtProt:NX_Q9H6Y2 PharmGKB:PA142670590 InParanoid:Q9H6Y2
PhylomeDB:Q9H6Y2 ChiTaRS:WDR55 GenomeRNAi:54853 NextBio:57710
ArrayExpress:Q9H6Y2 Bgee:Q9H6Y2 CleanEx:HS_WDR55
Genevestigator:Q9H6Y2 GermOnline:ENSG00000120314 Uniprot:Q9H6Y2
Length = 383
Score = 108 (43.1 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 34/109 (31%), Positives = 54/109 (49%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDE----ELVTFTHSMRGAVTALAFSSDGQPLLASGASS 246
PA D++A G DG + V + E EL + H ++ A A+AFS DGQ L+
Sbjct: 48 PARDLLAAGDVDGDVFVFSYSCQEGETKELWSSGHHLK-ACRAVAFSEDGQKLITVSKDK 106
Query: 247 GVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMW 295
I + ++E+ +L+ + +AH I SL +E VL + I +W
Sbjct: 107 A-IHVLDVEQGQLERRVSKAHGAPINSL-LLVDENVLATGDDTGGICLW 153
Score = 98 (39.6 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 32/127 (25%), Positives = 58/127 (45%)
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKS-RWEVGCSLVKIVYHRVNGLLAT 532
+G++ V + G I ++++ G S R+ + + + LL T
Sbjct: 210 SGDLTSVTLMKWGKKVACGSSEGTIYLFNWNGFGATSDRFALRAESIDCMVPVTESLLCT 269
Query: 533 VADDLVIRLFDVVALRMVRKFEGHT-DRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ D VIR +++ R+V HT + + + S G++L SSG D L+ WD+ Q
Sbjct: 270 GSTDGVIRAVNILPNRVVGSVGQHTGEPVEELALSHCGRFLASSGHDQRLKFWDMA---Q 326
Query: 592 IDAIHVD 598
+ A+ VD
Sbjct: 327 LRAVVVD 333
Score = 80 (33.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 20/86 (23%), Positives = 41/86 (47%)
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPL-CIRFYANGRHILSA 332
L F +L + D + ++ + +G+ + L + SGH + F +G+ +++
Sbjct: 44 LAFHPARDLLAAGDVDGDVFVFSYSCQEGETKEL-WSSGHHLKACRAVAFSEDGQKLITV 102
Query: 333 GQDRAFRLFSVIQDQQSRELSQRHVA 358
+D+A + V Q Q R +S+ H A
Sbjct: 103 SKDKAIHVLDVEQGQLERRVSKAHGA 128
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 144 (55.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 38/163 (23%), Positives = 79/163 (48%)
Query: 427 VKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTN 486
V+ S G + V G+ G+IE +N +G R L + N+ + V S +
Sbjct: 217 VECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKD-LKYQAQDNFMMMDDAVLCMSFSRD 275
Query: 487 TLMISAGYH-GDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLLATVADDLVIRLFD 543
T M++ G G IKVW + R+E S + + + + + + + + D IR+
Sbjct: 276 TEMLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHG 335
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ + + +++F GH+ + + + DG +S+ DG++++W++
Sbjct: 336 LKSGKCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKVWNM 378
Score = 138 (53.6 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 52/196 (26%), Positives = 84/196 (42%)
Query: 119 AFKGIEENLAPVG---HVKLDDKFTPTCI-MHPD-TYLNKVIVGSQEGSLQLWNIST--- 170
A K +EE P H+K K C PD YL + GS +G +++WN +T
Sbjct: 192 AVKDVEEERFPTQLARHIKFGQKSHVECARFSPDGQYL---VTGSVDGFIEVWNFTTGKI 248
Query: 171 KKKL-YE----FKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
+K L Y+ F +++A G DGKI V ++ + L + +
Sbjct: 249 RKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLRRYERAHSK 308
Query: 226 AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMS 285
VT L+FS D +L S + I I L+ + R H + + + +S
Sbjct: 309 GVTCLSFSKDSTQIL-SASFDQTIRIHGLKSGKCLKEFR-GHSSFVNEATLTPDGHHAIS 366
Query: 286 ASADNSIKMWIFDTTD 301
AS+D ++K+W TT+
Sbjct: 367 ASSDGTVKVWNMKTTE 382
Score = 120 (47.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 35/121 (28%), Positives = 58/121 (47%)
Query: 223 MRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
M AV ++FS D + +LA+GA G I +W ++ + AH + L F +
Sbjct: 263 MDDAVLCMSFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRYERAHSKGVTCLSFSKDSTQ 321
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +I+ I G L FR GHS+ +G H +SA D ++++
Sbjct: 322 ILSASFDQTIR--IHGLKSGKC-LKEFR-GHSSFVNEATLTPDGHHAISASSDGTVKVWN 377
Query: 343 V 343
+
Sbjct: 378 M 378
Score = 70 (29.7 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
Identities = 38/150 (25%), Positives = 65/150 (43%)
Query: 490 ISAGYHGDIKVWDFKGRDLKSRWE-VGCSL-VKIVYHRVNGLLATVADDLVI--RLFDVV 545
ISA G +KVW+ K + S ++ +G S I + V LL + V+ R VV
Sbjct: 365 ISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVI-LLPKNPEHFVVCNRSNTVV 423
Query: 546 ALRM----VRKFEGHTDRITDF--C-FSEDGKWLLSSGMDGSLRIWDVILARQIDAIHV- 597
+ M VR F DF C S G+W+ G D L + + + + V
Sbjct: 424 IMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERTLTVH 483
Query: 598 DVSITALSLSPNMDVLATAHVDQNGVY-LW 626
+ + ++ P+ +++ T ++G+ LW
Sbjct: 484 EKDVIGIAHHPHQNLIGT--YSEDGLLKLW 511
Score = 45 (20.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVW 501
ER+ H +V+G+A L+ + G +K+W
Sbjct: 477 ERTLTVHEKDVIGIAHHPHQNLIGTYSEDGLLKLW 511
Score = 37 (18.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 688 KQQIPDLVTLSLLPKSQWQSLINLDII 714
K++ D V +L P+ +W + D +
Sbjct: 439 KREGGDFVCCTLSPRGEWIYCVGEDYV 465
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 141 (54.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 82/375 (21%), Positives = 140/375 (37%)
Query: 267 HDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSG-HSAPPLCIR---- 321
H A+ + F + + S S IK+W DTT G L + SG H I+
Sbjct: 619 HSEAVWRVAFSPDGKQIASGSDSGLIKLW--DTTTGS--LQKTLSGSHPKRRYQIQQEQV 674
Query: 322 ----FYANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAKRARXXXXX----XXXXXX 373
F + + I+S D + L+ + +E++ +
Sbjct: 675 KAMAFLPDSKLIISGYYDGSVMLWDTTTGDR-QEIADHFGISKVNYTYLQPPEQGGYGLH 733
Query: 374 XPVIAFDCAEIRERDWCNVVTCHM--DTAQAYVWRLQNFVLGEHILRPCPENPTAVKACT 431
+ DC +I W TC M DTA LQ + G C
Sbjct: 734 AGAFSADCKQIAAFGWSRDSTCIMLFDTATG---DLQKILKGHS--HEC-------STMA 781
Query: 432 ISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDSTNTLMIS 491
S+ V G+ + +N +G D+ E++ H G V+ VA S ++S
Sbjct: 782 FSSDSRQLVTGSVDCTVRLWNTTTG-------DL-EKTFVGHTGTVLSVAISSDGRQIVS 833
Query: 492 AGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVALRMVR 551
+K+WD DL G + + + + +A D I ++D + +
Sbjct: 834 GSIEA-VKLWDAATGDLLKTLASGFA-GSVAFSPDSRQIAAGFKDGKIFIWDAAGT-LQK 890
Query: 552 KFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITALSLSPNMD 611
E H I FS D K L++ D +++ WD+ + +A+ +T + LSP+
Sbjct: 891 TLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGK 950
Query: 612 VLATAHVDQNGVYLW 626
V+A+ D+ + LW
Sbjct: 951 VIASGSADKT-IKLW 964
Score = 132 (51.5 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 51/202 (25%), Positives = 89/202 (44%)
Query: 153 KVIVGSQEGSLQLWNISTKKKLYEFKGW-GXXXXXXXXXPALDVVAVGCSDGKIHVHNVR 211
+++ GS + +++LWN +T F G G +V+ G + + + +
Sbjct: 788 QLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVS-GSIEA-VKLWDAA 845
Query: 212 YDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAI 271
+ L T G+V AFS D + + A+G G I IW+ LQ + E H AI
Sbjct: 846 TGDLLKTLASGFAGSV---AFSPDSRQI-AAGFKDGKIFIWDAAGT-LQKTL-ERHPGAI 899
Query: 272 ISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILS 331
+S+ F + L++ S D++IK W D T G ++ GHS + +G+ I S
Sbjct: 900 MSIAFSPDVKQLVTCSTDSTIKRW--DITIGG---VQEAVGHSKHVTTMVLSPDGKVIAS 954
Query: 332 AGQDRAFRLFSVIQDQQSRELS 353
D+ +L+ + L+
Sbjct: 955 GSADKTIKLWDAATGDLQKTLT 976
Score = 117 (46.2 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 36/157 (22%), Positives = 72/157 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCS--LVKIVYHRVNGLL 530
H G ++ +A +++ IK WD ++ VG S + +V ++
Sbjct: 895 HPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEA--VGHSKHVTTMVLSPDGKVI 952
Query: 531 ATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
A+ + D I+L+D + + GH D + FS D + ++S + +++IWD +
Sbjct: 953 ASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKIWDAATGK 1011
Query: 591 QIDAIHVDVSITALSLSPNMDVLATAHVDQNG-VYLW 626
++ D T +++SP+ +A+ H NG + LW
Sbjct: 1012 VQNSFESDDVFTIVAVSPDGKHIASGHC--NGRIKLW 1046
Score = 110 (43.8 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 29/108 (26%), Positives = 53/108 (49%)
Query: 479 GVACDSTNTLMISAGYH-GDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDL 537
G S ++ I+AG+ G I +WD G K+ +++ I + L T + D
Sbjct: 859 GSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQKTLERHPGAIMSIAFSPDVKQLVTCSTDS 918
Query: 538 VIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
I+ +D+ + V++ GH+ +T S DGK + S D ++++WD
Sbjct: 919 TIKRWDIT-IGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWD 965
Score = 102 (41.0 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 32/113 (28%), Positives = 61/113 (53%)
Query: 231 AFSSDGQPLLASGAS--SGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASA 288
AFS+D + + A G S S I +++ LQ +++ H + ++ F ++ L++ S
Sbjct: 736 AFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILK-GHSHECSTMAFSSDSRQLVTGSV 794
Query: 289 DNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLF 341
D ++++W +TT GD L + GH+ L + ++GR I+S G A +L+
Sbjct: 795 DCTVRLW--NTTTGD--LEKTFVGHTGTVLSVAISSDGRQIVS-GSIEAVKLW 842
Score = 92 (37.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 27/115 (23%), Positives = 50/115 (43%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV-KIVYHRVNGLLA 531
H+ V + ++ S IK+WD DL+ V K+V+ N +
Sbjct: 936 HSKHVTTMVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIV 995
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
+ + + V +++D ++ FE D T S DGK + S +G +++WD+
Sbjct: 996 SCSSEAV-KIWDAATGKVQNSFESD-DVFTIVAVSPDGKHIASGHCNGRIKLWDM 1048
Score = 66 (28.3 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 559 RITDFCFSEDGKWLLSSGMDGSLRIWDVI---LARQIDAIHVDVSIT-ALSLS 607
+IT FS D K +LS+ D ++++WD L +++ H D IT A S S
Sbjct: 1085 QITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPC-HSDSIITDAFSRS 1136
Score = 58 (25.5 bits), Expect = 7.4e-06, Sum P(4) = 7.4e-06
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 555 GHTDRITDFCFSEDGKWLLSSGMDGSLRIWDV 586
G+ + I FS DG+ + ++ D ++R+W +
Sbjct: 1138 GYPNWIFSVAFSSDGQHIAAASADKTIRVWSI 1169
Score = 50 (22.7 bits), Expect = 7.4e-06, Sum P(4) = 7.4e-06
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 474 NGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGC-SLVKIVYHRVNG 528
N ++ G+ L++S IK+WD DL+ R S++ + R +G
Sbjct: 1083 NTQITGLVFSPDAKLILSTSTDRAIKLWDAATGDLQKRLPCHSDSIITDAFSRSSG 1138
Score = 47 (21.6 bits), Expect = 5.3e-08, Sum P(3) = 5.3e-08
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 147 PDTYLNKVIVGSQEGSLQLWNIST 170
PD+ L +I G +GS+ LW+ +T
Sbjct: 681 PDSKL--IISGYYDGSVMLWDTTT 702
Score = 39 (18.8 bits), Expect = 4.3e-05, Sum P(4) = 4.3e-05
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 153 KVIVGSQEGSLQLWNIST 170
++ GS G ++LW+ +T
Sbjct: 634 QIASGSDSGLIKLWDTTT 651
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 114 (45.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 35/120 (29%), Positives = 57/120 (47%)
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNA-IISLHFFANEPVL 283
G V A+ FS G LLA+G + +W + + + + NA I S+ F + L
Sbjct: 339 GEVNAVQFSP-GSRLLATGGMDRRVKLWEVFGDKCEFKGSLSGSNAGITSIEFDSAGSYL 397
Query: 284 MSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
++AS D + ++W D D RL +GHS L +F + I+S DR +L+ +
Sbjct: 398 LAASNDFASRIWTVD----DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDL 453
Score = 97 (39.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 479 GVACDS---TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG----LLA 531
G +C+ T ++S + I+ WD + + E+ L KI +N LL+
Sbjct: 465 GSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREMEL---LGKITALDLNPERTELLS 521
Query: 532 TVADDLVIRLFD--VVALRMVRKFEGHT--DRITDFCFSEDGKWLLSSGMDGSLRIWDVI 587
DDL +++ D + A+R G T FS DG ++ + +GSL IW+V+
Sbjct: 522 CSRDDL-LKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVL 580
Query: 588 LAR--QIDAIHVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ ++ + H SI A++ SP + T V LW
Sbjct: 581 SGKVEKVLSKHHSSSINAVAWSPAGSHVVTVDKGSKAV-LW 620
Score = 85 (35.0 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 265 EAHDNAIISLHFFANEPVLMSASADNSIKMW-IFDTTDGDPRLLRFR-SGHSAPPLCIRF 322
+AHD + ++ F +L + D +K+W +F GD + SG +A I F
Sbjct: 335 DAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVF----GDKCEFKGSLSGSNAGITSIEF 390
Query: 323 YANGRHILSAGQDRAFRLFSVIQDQQSRELSQRHVAK 359
+ G ++L+A D A R+++V D + R H K
Sbjct: 391 DSAGSYLLAASNDFASRIWTV-DDYRLRHTLTGHSGK 426
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 142 (55.0 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 33/157 (21%), Positives = 72/157 (45%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKG-RDLKSRWEVGCSLVKIVYHRVNGLLA 531
H + + + L+++ G I+VWD + + L++ ++ + +H +A
Sbjct: 61 HTTPIESLQISAKEELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFVA 120
Query: 532 TVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQ 591
+ + D I+L+DV + K++ HT + FS DGKWL S+ D ++++WD+ +
Sbjct: 121 SGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKV 180
Query: 592 IDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ H + + P+++ L + + W
Sbjct: 181 MFEFTGHYG-PVNVVEFHPSIEYLLASGSSSMTIRFW 216
Score = 137 (53.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 48/210 (22%), Positives = 93/210 (44%)
Query: 425 TAVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMSERSNYAHNGEVVGVACDS 484
T +++ ISA V G+ G I ++L++ L R+ H + +
Sbjct: 63 TPIESLQISAKEELIVAGSQSGSIRVWDLEAA----KIL----RTLLGHKANICSLDFHP 114
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGL-LATVADDLVIRLFD 543
+ + S DIK+WD + + +++ V+ + +G LA+ ADD ++L+D
Sbjct: 115 YGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWD 174
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDG-SLRIWDVILARQIDAIHVDVS-I 601
+ A +++ +F GH + F ++LL+SG ++R WD+ + I + + +
Sbjct: 175 LTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEATPV 234
Query: 602 TALSLSPNMDVLATAHVDQNGVYLWV-NRC 630
+ +P+ L D VY W RC
Sbjct: 235 RCILFNPDGCCLYGGFQDSLRVYGWEPERC 264
Score = 130 (50.8 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 40/150 (26%), Positives = 76/150 (50%)
Query: 195 VVAVGCSDGKIHVHNV-RYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWN 253
++A G D +++V +V + +L+T H+ + +L S+ + L+ +G+ SG I +W+
Sbjct: 35 LLATGGDDCRVNVWSVAQLRHDLLT-GHTT--PIESLQISAK-EELIVAGSQSGSIRVWD 90
Query: 254 LEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGH 313
LE ++ + H I SL F + S S D IK+W D + +++S H
Sbjct: 91 LEAAKILRTLL-GHKANICSLDFHPYGSFVASGSLDTDIKLW--DVRRKGC-IFKYKS-H 145
Query: 314 SAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ C+RF +G+ + SA D +L+ +
Sbjct: 146 TQAVRCLRFSPDGKWLASAADDHTVKLWDL 175
Score = 108 (43.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 214 EELVTFTHSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
+E+V HS V++L LLA+G +++W++ + L+ + H I S
Sbjct: 14 QEIVA--HSSN--VSSLVLGKSTGRLLATGGDDCRVNVWSVAQ--LRHDLLTGHTTPIES 67
Query: 274 LHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAG 333
L A E ++++ S SI++W + ++LR GH A + F+ G + S
Sbjct: 68 LQISAKEELIVAGSQSGSIRVWDLEAA----KILRTLLGHKANICSLDFHPYGSFVASGS 123
Query: 334 QDRAFRLFSV 343
D +L+ V
Sbjct: 124 LDTDIKLWDV 133
Score = 81 (33.6 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 42/183 (22%), Positives = 76/183 (41%)
Query: 489 MISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YH-RVNGLLATVADDLVIRLFDVVA 546
+ SA +K+WD + + V +V +H + LLA+ + + IR +D+
Sbjct: 161 LASAADDHTVKLWDLTAGKVMFEFTGHYGPVNVVEFHPSIEYLLASGSSSMTIRFWDLEK 220
Query: 547 LRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVSITA-LS 605
+V E + F+ DG L G SLR++ R D + V+ A LS
Sbjct: 221 FHVVSCIEEEATPVRCILFNPDG-CCLYGGFQDSLRVYGWEPERCFDVVVVNWGKVADLS 279
Query: 606 LSPNMDV-LATAHVDQNGVYLWVNRCMFSGDSNIDSYASGKEIVSVKMPSVSSVEGCQDE 664
+ N + ++ A + + ++R SG S E+++ P+ SS+ D
Sbjct: 280 VCHNQLIGVSFAQSTVSSFVVDLSRVTKSG-SVPHGLLRNNELLAQPTPTGSSLRRSYDR 338
Query: 665 NSS 667
S+
Sbjct: 339 PST 341
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 47/163 (28%), Positives = 72/163 (44%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-G---RDLKSRWEVGCSLVKIVYHRVN 527
+H V VA T + S IK+WD++ G R LK G S + + N
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIR-GVSGLDYGGQKGN 170
Query: 528 GLLATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMDGSLRIWD 585
LLA+ + DL I+L+D +R GH ++ F + + L+S+ DG+LRIWD
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Query: 586 VILARQIDAIHVDVSITALSLSPNMDV--LATAHVDQNGVYLW 626
V + I +SP+ D L + DQ + +W
Sbjct: 231 VSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQ-AITVW 272
Score = 113 (44.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD-GQPLLASGASSGVI 249
P +A G D I + + E T +RG V+ L + G LLAS +S I
Sbjct: 124 PVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRG-VSGLDYGGQKGNTLLASCSSDLTI 182
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHFF-ANEPVLMSASADNSIKMWIFDTTDGD-PRLL 307
+W+ K HD+++ S+ F +N+ L+SAS D ++++W D + G +++
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW--DVSTGFCVKVI 240
Query: 308 RFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + + F +G+ ++S G+D+A ++ V
Sbjct: 241 KSATESWIRDVSPSF--DGKWLVSGGRDQAITVWEV 274
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI-- 587
+AT A D I+L++ R+++ GH + + F GK+L S D ++R WD+
Sbjct: 323 VATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Query: 588 --LARQIDAIHVD-VSITALSLSPNMD 611
L + I H VS + SPN D
Sbjct: 382 GRLVKTISGAHEHFVSCIRWAPSPNTD 408
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 33/177 (18%), Positives = 70/177 (39%)
Query: 132 HVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW--GXXXXXXX 188
H + TC+ HP + GS++ ++++W+ + KG G
Sbjct: 108 HTLTSHRDAVTCVAFHP--VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG 165
Query: 189 XXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGV 248
++A SD I + + D + +V+++ F + L S + G
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 249 ISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPR 305
+ IW++ VI+ A ++ I + + L+S D +I +W + + +P+
Sbjct: 226 LRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVW--EVSSAEPK 280
Score = 64 (27.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 498 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL-RMVRKFEG 555
IK+W+ +GR +K+ + +V+H L +V+DD IR +D+ R+V+ G
Sbjct: 332 IKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 47/163 (28%), Positives = 72/163 (44%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDFK-G---RDLKSRWEVGCSLVKIVYHRVN 527
+H V VA T + S IK+WD++ G R LK G S + + N
Sbjct: 112 SHRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIR-GVSGLDYGGQKGN 170
Query: 528 GLLATVADDLVIRLFDVVA-LRMVRKFEGHTDRITDFCF-SEDGKWLLSSGMDGSLRIWD 585
LLA+ + DL I+L+D +R GH ++ F + + L+S+ DG+LRIWD
Sbjct: 171 TLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIWD 230
Query: 586 VILARQIDAIHVDVSITALSLSPNMDV--LATAHVDQNGVYLW 626
V + I +SP+ D L + DQ + +W
Sbjct: 231 VSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQ-AITVW 272
Score = 113 (44.8 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 40/156 (25%), Positives = 75/156 (48%)
Query: 191 PALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSD-GQPLLASGASSGVI 249
P +A G D I + + E T +RG V+ L + G LLAS +S I
Sbjct: 124 PVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRG-VSGLDYGGQKGNTLLASCSSDLTI 182
Query: 250 SIWNLEKRRLQSVIREAHDNAIISLHFF-ANEPVLMSASADNSIKMWIFDTTDGD-PRLL 307
+W+ K HD+++ S+ F +N+ L+SAS D ++++W D + G +++
Sbjct: 183 KLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGTLRIW--DVSTGFCVKVI 240
Query: 308 RFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSV 343
+ + + F +G+ ++S G+D+A ++ V
Sbjct: 241 KSATESWIRDVSPSF--DGKWLVSGGRDQAITVWEV 274
Score = 94 (38.1 bits), Expect = 5.7e-08, Sum P(2) = 5.7e-08
Identities = 27/87 (31%), Positives = 42/87 (48%)
Query: 530 LATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVI-- 587
+AT A D I+L++ R+++ GH + + F GK+L S D ++R WD+
Sbjct: 323 VATGARDKTIKLWEARG-RLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Query: 588 --LARQIDAIHVD-VSITALSLSPNMD 611
L + I H VS + SPN D
Sbjct: 382 GRLVKTISGAHEHFVSCIRWAPSPNTD 408
Score = 73 (30.8 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 33/177 (18%), Positives = 70/177 (39%)
Query: 132 HVKLDDKFTPTCI-MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGW--GXXXXXXX 188
H + TC+ HP + GS++ ++++W+ + KG G
Sbjct: 108 HTLTSHRDAVTCVAFHP--VFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYG 165
Query: 189 XXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRGAVTALAFSSDGQPLLASGASSGV 248
++A SD I + + D + +V+++ F + L S + G
Sbjct: 166 GQKGNTLLASCSSDLTIKLWDPSKDYANIRTLSGHDHSVSSVRFLTSNDNHLISASRDGT 225
Query: 249 ISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPR 305
+ IW++ VI+ A ++ I + + L+S D +I +W + + +P+
Sbjct: 226 LRIWDVSTGFCVKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVW--EVSSAEPK 280
Score = 64 (27.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 498 IKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDVVAL-RMVRKFEG 555
IK+W+ +GR +K+ + +V+H L +V+DD IR +D+ R+V+ G
Sbjct: 332 IKLWEARGRLIKTLHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQEGRLVKTISG 390
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 109 (43.4 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 31/104 (29%), Positives = 55/104 (52%)
Query: 484 STNTLMI-SAGYHGDIKVWDFK-GRDLKS-RWEVGCSLVKIVYHRVNGLLATVADDLVIR 540
S +T +I SA + IK+W+ + G+ L S R V ++ +I + + LL + + D ++
Sbjct: 394 SPDTRIIASASFDKSIKLWEGRTGKYLTSLRGHVS-AVYQIAWSADSRLLVSGSSDSTLK 452
Query: 541 LFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIW 584
++D ++ GH D + +S DG+ + S G D LRIW
Sbjct: 453 VWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGKDKCLRIW 496
Score = 99 (39.9 bits), Expect = 6.6e-08, Sum P(2) = 6.6e-08
Identities = 36/142 (25%), Positives = 70/142 (49%)
Query: 220 THSMRG---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHF 276
T S+ G AV ++AFS G+ LASG+ + W+L Q + H + ++S+ +
Sbjct: 120 TSSLEGHTEAVISVAFSPTGK-YLASGSGDTTVRFWDLSTETPQFTAK-GHRHWVLSIAW 177
Query: 277 FANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRF---YANG--RHILS 331
+ L S ++ I +W D G+ ++ R +GHS C+ + + N R++ S
Sbjct: 178 SPDGKKLASGCKNSQIFLW--DPATGN-QIGRVLTGHSKWITCLCWEPLHINPECRYLAS 234
Query: 332 AGQDRAFRLFSVIQDQQSRELS 353
A +D + R++ + + + L+
Sbjct: 235 ASKDGSIRIWDTLMGRCDKILT 256
Score = 98 (39.6 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 40/164 (24%), Positives = 72/164 (43%)
Query: 157 GSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEEL 216
GS + +++ W++ST+ + KG P +A GC + +I + + ++
Sbjct: 145 GSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQI 204
Query: 217 --VTFTHSMRGAVTALAFSS-DGQP---LLASGASSGVISIWNLEKRRLQSVIREAHDNA 270
V HS +T L + P LAS + G I IW+ R ++ H +
Sbjct: 205 GRVLTGHSKW--ITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILT-GHTQS 261
Query: 271 IISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
+ + + + +L S+S D +IK+W + DG L R GH+
Sbjct: 262 VTCVKW-GGDGLLYSSSQDRTIKVW--RSQDGI--LCRTLQGHA 300
Score = 84 (34.6 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
++A+ + D I+L++ + + GH + +S D + L+S D +L++WD
Sbjct: 399 IIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWDAET 458
Query: 589 AR-QIDAI-HVDVSITALSLSPNMDVLATAHVDQ 620
+ ID H D + A SP+ +A+ D+
Sbjct: 459 KKLAIDLPGHAD-EVFATDWSPDGQRVASGGKDK 491
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 142 (55.0 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKT-IKMW 219
Score = 116 (45.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 48/198 (24%), Positives = 82/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKV----WDYETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SA+ D +IKMW T G ++ +GH +R +G I S D+ R++
Sbjct: 207 IVSAARDKTIKMWEVQT--G--YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 89 (36.4 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 26/129 (20%), Positives = 59/129 (45%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNT---LMISAGYHGDIKVWDFK-GRDLKSRWEVGC-S 517
+ + S+Y+ E G + ++S IK+WD G L + VG +
Sbjct: 282 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL--VGHDN 339
Query: 518 LVK-IVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSG 576
V+ +++H + + ADD +R++D R ++ H +T F + ++++
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 399
Query: 577 MDGSLRIWD 585
+D ++++W+
Sbjct: 400 VDQTVKVWE 408
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 140 (54.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 28/110 (25%), Positives = 60/110 (54%)
Query: 518 LVKIVYHRVNGLLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGM 577
+ ++++H V ++ + ++D I+++D R +GHTD + D F GK L S
Sbjct: 111 VTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSA 170
Query: 578 DGSLRIWDVILARQIDAIHV-DVSITALSLSPNMDVLATAHVDQNGVYLW 626
D ++++WD I +H D +++++++ PN D + +A D+ + +W
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKT-IKMW 219
Score = 123 (48.4 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 48/198 (24%), Positives = 83/198 (41%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELVTFTHSMRG 225
W I + Y G P V+ D I V +D E F +++G
Sbjct: 94 W-IPRPPEKYALSGHRSPVTRVIFHPVFSVIVSASEDATIKV----WDHETGDFERTLKG 148
Query: 226 ---AVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPV 282
+V ++F G+ LLAS ++ I +W+ + + HD+ + S+ N
Sbjct: 149 HTDSVQDISFDHTGK-LLASCSADMTIKLWDFQGFECIRTMH-GHDHNVSSVAIMPNGDH 206
Query: 283 LMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFS 342
++SAS D +IKMW + G ++ +GH +R +G I S+ D+ R++
Sbjct: 207 IVSASRDKTIKMW--EVATG--YCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWV 262
Query: 343 VIQDQQSRELSQR-HVAK 359
V + EL + HV +
Sbjct: 263 VATKECKAELREHEHVVE 280
Score = 119 (46.9 bits), Expect = 0.00096, P = 0.00096
Identities = 34/129 (26%), Positives = 60/129 (46%)
Query: 467 ERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRV 526
ER+ H V ++ D T L+ S IK+WDF+G + V V
Sbjct: 143 ERTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMP 202
Query: 527 NG-LLATVADDLVIRLFDVVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
NG + + + D I++++V V+ F GH + + ++DG + SS D ++R+W
Sbjct: 203 NGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVW- 261
Query: 586 VILARQIDA 594
V+ ++ A
Sbjct: 262 VVATKECKA 270
Score = 81 (33.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 22/100 (22%), Positives = 48/100 (48%)
Query: 489 MISAGYHGDIKVWDFK-GRDLKSRWEVGC-SLVK-IVYHRVNGLLATVADDLVIRLFDVV 545
++S IK+WD G L + VG + V+ ++ H + + ADD +R++D
Sbjct: 311 LLSGSRDKTIKMWDVSIGMCLMTL--VGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDYK 368
Query: 546 ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWD 585
R + H +T F + ++++ +D ++++W+
Sbjct: 369 NKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 48 (22.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 569 GKWLLSSGMDGSLRIWDV 586
G +LLS D ++++WDV
Sbjct: 308 GPFLLSGSRDKTIKMWDV 325
Score = 46 (21.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 12/72 (16%), Positives = 30/72 (41%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLV-KIVYHRVNGLLA 531
H+ V GV ++S +++WD+K + V + +H+ +
Sbjct: 337 HDNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTLSAHEHFVTSLDFHKTAPYVV 396
Query: 532 TVADDLVIRLFD 543
T + D +++++
Sbjct: 397 TGSVDQTVKVWE 408
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 153 (58.9 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 145 MHPDTYLNKVIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGK 204
MH T ++ SQ+G L +W+ T K++ P+ + VA G D
Sbjct: 17 MHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNI 76
Query: 205 IHVHNVRYDEELVTFTHSMRGAVTALA---FSSDGQPLLASGASSGVISIWNLEKRRLQS 261
+++++ E V + + G L+ F D Q + +SG ++ ++W++E + Q+
Sbjct: 77 CSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTT--CALWDIETGQ-QT 133
Query: 262 VIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIR 321
V H ++SL + +S + D SIK+W D D R GH + +
Sbjct: 134 VGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLW--DVRDSMCRQTFI--GHESDINAVA 189
Query: 322 FYANGRHILSAGQDRAFRLFSVIQDQQ 348
F+ NG + D RLF + DQ+
Sbjct: 190 FFPNGYAFTTGSDDATCRLFDLRADQE 216
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 35/142 (24%), Positives = 65/142 (45%)
Query: 155 IVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDE 214
+ G+ + S++LW++ F G P G D + ++R D+
Sbjct: 156 VSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQ 215
Query: 215 ELVTFTH-SMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIIS 273
EL+ ++H ++ +T++AFS G+ LLA G +IW+ K V+ HDN +
Sbjct: 216 ELLMYSHDNIICGITSVAFSRSGRLLLA-GYDDFNCNIWDAMKGDRAGVLA-GHDNRVSC 273
Query: 274 LHFFANEPVLMSASADNSIKMW 295
L + + + S D+ +K+W
Sbjct: 274 LGVTDDGMAVATGSWDSFLKIW 295
Score = 105 (42.0 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 39/160 (24%), Positives = 71/160 (44%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNGLLAT 532
H+G+V+ ++ +S IK+WD + + + S + V NG T
Sbjct: 139 HSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFT 198
Query: 533 V-ADDLVIRLFDVVALRMVRKFEGHTD---RITDFCFSEDGKWLLSSGMDGSLRIWDVIL 588
+DD RLFD+ A + + + H + IT FS G+ LL+ D + IWD +
Sbjct: 199 TGSDDATCRLFDLRADQELLMYS-HDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMK 257
Query: 589 ARQIDAI--HVDVSITALSLSPNMDVLATAHVDQNGVYLW 626
+ + H D ++ L ++ + +AT D + + +W
Sbjct: 258 GDRAGVLAGH-DNRVSCLGVTDDGMAVATGSWD-SFLKIW 295
Score = 80 (33.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 27/123 (21%), Positives = 54/123 (43%)
Query: 227 VTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAIISLHFFANEPVLMSA 286
+ A+ + +D + LL S + G + IW+ I + +++ + + +
Sbjct: 14 IYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNFVACG 71
Query: 287 SADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSAGQDRAFRLFSVIQD 346
DN ++ T +G+ R+ R GH+ C RF + + I S+G D L+ +
Sbjct: 72 GLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIITSSG-DTTCALWDIETG 130
Query: 347 QQS 349
QQ+
Sbjct: 131 QQT 133
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 155 (59.6 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 46/188 (24%), Positives = 87/188 (46%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ S + +L+++ + T K KG P +V G D + + +VR
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTG 195
Query: 214 EELVTF-THSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+ T HS V+A++F+ DG L+ SG+ G++ IW+ + + + + +
Sbjct: 196 MCVKTLPAHS--DPVSAVSFNRDGS-LITSGSYDGLVRIWDTANGQCVKTLVDDENPPVA 252
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYAN-----GR 327
+ F N ++S++ DN++K+W F G + L+ GH CI +AN G+
Sbjct: 253 FVKFSPNGKYILSSNLDNTLKLWDF----GKGKTLKQYQGHENNKYCI--FANFSVTGGK 306
Query: 328 HILSAGQD 335
I+S +D
Sbjct: 307 WIISGSED 314
Score = 122 (48.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 37/164 (22%), Positives = 83/164 (50%)
Query: 472 AHNGEVVGVACDSTNTLMISAGYHGDIKVWDF-KGRDLKSRWEVGCSLVKIVYHRVNG-- 528
AH+ V V+ + +L+ S Y G +++WD G+ +K+ + V V NG
Sbjct: 203 AHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKY 262
Query: 529 LLATVADDLVIRLFDVVALRMVRKFEGH-TDRITDFC-FS-EDGKWLLSSGMDGSLRIWD 585
+L++ D+ ++L+D + +++++GH ++ F FS GKW++S D + +W+
Sbjct: 263 ILSSNLDN-TLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWN 321
Query: 586 VILARQIDAI--HVDVSITALSLSPNMDVLATAHVD-QNGVYLW 626
+ + ++ H ++ A P +++A+ ++ N + +W
Sbjct: 322 LQTKEVVQSLEGHTQ-AVIASDCHPMQNMIASGALEPDNTIRIW 364
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 43/205 (20%), Positives = 92/205 (44%)
Query: 426 AVKACTISACGNFAVLGTAGGWIERFNLQSGISRGSYLDMS-ERSNYAHNGEVVGVACDS 484
++ A S CG F +A ++ +N+ D+S ER+ H V A +
Sbjct: 81 SISAVKFSPCGKFLGTSSADKTVKIWNMS---------DLSCERTLTGHKLGVNDFAWSA 131
Query: 485 TNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV-YHRVNGLLATVADDLVIRLFD 543
+ +++A +K+++ + + + V ++ + L+ + + D +R++D
Sbjct: 132 DSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWD 191
Query: 544 VVALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILARQIDAIHVDVS--I 601
V V+ H+D ++ F+ DG + S DG +RIWD + + + D + +
Sbjct: 192 VRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPV 251
Query: 602 TALSLSPNMDVLATAHVDQNGVYLW 626
+ SPN + ++++D N + LW
Sbjct: 252 AFVKFSPNGKYILSSNLD-NTLKLW 275
Score = 108 (43.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 24/102 (23%), Positives = 56/102 (54%)
Query: 486 NTLMISAGYHGDIKVWDFK-GRDLKSRWEVGCSLVKIVYHRVNGLLATVADDLVIRLFDV 544
++L++S + +++WD + G +K+ + + ++R L+ + + D ++R++D
Sbjct: 175 SSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDT 234
Query: 545 VALRMVRKFEGHTDRITDFC-FSEDGKWLLSSGMDGSLRIWD 585
+ V+ + F FS +GK++LSS +D +L++WD
Sbjct: 235 ANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWD 276
Score = 70 (29.7 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 22/86 (25%), Positives = 41/86 (47%)
Query: 258 RLQSVIREAHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPP 317
+L S I E H +I ++ F L ++SAD ++K+W D R +GH
Sbjct: 70 KLISTI-EGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMS----DLSCERTLTGHKLGV 124
Query: 318 LCIRFYANGRHILSAGQDRAFRLFSV 343
+ A+ + I++A D+ +++ V
Sbjct: 125 NDFAWSADSKSIVTASDDKTLKIYEV 150
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 141 (54.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 40/152 (26%), Positives = 70/152 (46%)
Query: 473 HNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIVYHRVNG-LLA 531
HN + V + + SA G I+ WD + + S + + +G +
Sbjct: 59 HNRSIDCVRFAYKDNFVYSADDIGIIRRWDLNSQKIYSTLNGHMKSGRTLDFNPSGEYVV 118
Query: 532 TVADDLVIRLFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSLRIWDVILAR 590
+ ++D +RL+DV ++ GH + FS DG W+ S+G++GS+ IWD+ ++
Sbjct: 119 SGSNDTTVRLWDVQNENNCIKVCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSK 178
Query: 591 QIDAIHVDVSITALS---LSPNMDVLATAHVD 619
QI D +TA++ P +LA VD
Sbjct: 179 QIMEFIADPPVTAITCVQFHPFEFLLAAGRVD 210
Score = 70 (29.7 bits), Expect = 9.0e-08, Sum P(2) = 9.0e-08
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 257 RRLQSVIRE--AHDNAIISLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHS 314
R+L S I + AHD+ + SL VL++ D ++ +W G +GH+
Sbjct: 5 RKLISKIYDIKAHDSRVTSLDLGETGRVLVTGGEDRNVNLWAI----GQNECFMSLTGHN 60
Query: 315 APPLCIRFYANGRHILSA 332
C+RF + SA
Sbjct: 61 RSIDCVRFAYKDNFVYSA 78
>MGI|MGI:2145443 [details] [associations]
symbol:Utp15 "UTP15, U3 small nucleolar ribonucleoprotein,
homolog (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2145443
GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006364 CTD:84135
GeneTree:ENSGT00390000004228 HOGENOM:HOG000185028
HOVERGEN:HBG080690 KO:K14549 OMA:QFEGHTK OrthoDB:EOG4Q58P5
ChiTaRS:UTP15 EMBL:AY151261 EMBL:AK049186 EMBL:AK162794
EMBL:BC034372 EMBL:BC065057 IPI:IPI00226889 RefSeq:NP_849249.1
UniGene:Mm.28221 ProteinModelPortal:Q8C7V3 SMR:Q8C7V3 STRING:Q8C7V3
PhosphoSite:Q8C7V3 PaxDb:Q8C7V3 PRIDE:Q8C7V3
Ensembl:ENSMUST00000040972 GeneID:105372 KEGG:mmu:105372
UCSC:uc007rom.1 InParanoid:Q8C7V3 NextBio:357640 Bgee:Q8C7V3
Genevestigator:Q8C7V3 GermOnline:ENSMUSG00000041747 Uniprot:Q8C7V3
Length = 528
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 43/190 (22%), Positives = 87/190 (45%)
Query: 154 VIVGSQEGSLQLWNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYD 213
++ GS++G +QL++I+ + L +F+G V G D + + ++
Sbjct: 95 LVAGSEDGVVQLFDINGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVKLWDIPNS 154
Query: 214 EELVTFT-HSMRGAVTALAFSSDGQPLLASGASSGVISIWNLEKRRLQSVIREAHDNAII 272
+E++TF HS V S L +G+ + I+ + R ++V+ H +
Sbjct: 155 KEILTFKEHS--DYVRCGCASKLNPDLFVTGSYDHTVKIF--DARTNKNVLCVEHGQPVE 210
Query: 273 SLHFFANEPVLMSASADNSIKMWIFDTTDGDPRLLRFRSGHSAPPLCIRFYANGRHILSA 332
S+ F + +L+SA +K+W D G L+ ++ H C+ ++G+ +LS
Sbjct: 211 SVLLFPSGGLLVSAGG-RYVKVW--DMLKGGQLLVSLKNHHKTVT-CLCLSSSGQRLLSG 266
Query: 333 GQDRAFRLFS 342
DR +++S
Sbjct: 267 SLDRKVKVYS 276
Score = 110 (43.8 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 166 WNISTKKKLYEFKGWGXXXXXXXXXPALDVVAVGCSDGKIHVHNVRYDEELV-TFTHSMR 224
WN K + K +G P L + +IH++ RY +E V TF+
Sbjct: 26 WN--NYKTPVQIKEFGAVSKVDFS-PQLPYNYAVTASSRIHIYG-RYSQEPVKTFSRFKD 81
Query: 225 GAVTALAFSSDGQPLLASGASSGVISIWNLEKRR-LQSVIREAHDNAIISLHFFANEPVL 283
A A F DGQ LL +G+ GV+ ++++ R L+ E H A+ ++ F A+ +
Sbjct: 82 TAYCA-TFRQDGQ-LLVAGSEDGVVQLFDINGRAPLRQF--EGHTKAVHTVDFTADNYHV 137
Query: 284 MSASADNSIKMW 295
+S + D ++K+W
Sbjct: 138 VSGADDYTVKLW 149
Score = 97 (39.2 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 33/162 (20%), Positives = 69/162 (42%)
Query: 463 LDMSERSNYAHNGEVVGVACDSTNTLMISAGYHGDIKVWDFKGRDLKSRWEVGCSLVKIV 522
L E S+Y G A L ++ Y +K++D + E G + ++
Sbjct: 158 LTFKEHSDYVR----CGCASKLNPDLFVTGSYDHTVKIFDARTNKNVLCVEHGQPVESVL 213
Query: 523 YHRVNGLLATVADDLVIRLFDVV-ALRMVRKFEGHTDRITDFCFSEDGKWLLSSGMDGSL 581
GLL + A ++++D++ +++ + H +T C S G+ LLS +D +
Sbjct: 214 LFPSGGLLVS-AGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKV 272
Query: 582 RIWDVILARQIDAIHVDVSITALSLSPNMDVLATAHVDQNGV 623
+++ + + + SI +L+LS + + NG+
Sbjct: 273 KVYSTTSYKVVHSFDYAASILSLALSHQDETIVVGMT--NGI 312
WARNING: HSPs involving 555 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 907 875 0.00085 122 3 11 22 0.50 33
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 805
No. of states in DFA: 634 (67 KB)
Total size of DFA: 466 KB (2219 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 80.44u 0.09s 80.53t Elapsed: 00:00:04
Total cpu time: 80.56u 0.10s 80.66t Elapsed: 00:00:04
Start: Tue May 21 14:15:45 2013 End: Tue May 21 14:15:49 2013
WARNINGS ISSUED: 2