Query 002566
Match_columns 907
No_of_seqs 745 out of 5901
Neff 8.5
Searched_HMMs 29240
Date Tue Mar 26 15:47:12 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002566.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1286-1289//hhsearch_pdb/002566hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 1.0 1 1 351.9 17.3 209 675-886 12-236 (299)
2 4fie_A Serine/threonine-protei 1.0 1 1 351.2 22.2 201 675-885 150-351 (423)
3 4aoj_A High affinity nerve gro 1.0 1 1 350.9 20.3 208 676-886 41-266 (329)
4 4fih_A Serine/threonine-protei 1.0 1 1 349.9 20.7 201 675-885 73-274 (346)
5 4b9d_A Serine/threonine-protei 1.0 1 1 349.6 17.5 203 676-885 24-229 (350)
6 4gt4_A Tyrosine-protein kinase 1.0 1 1 346.1 19.1 207 677-886 27-253 (308)
7 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 342.5 18.4 201 676-884 32-237 (311)
8 3omv_A RAF proto-oncogene seri 1.0 1 1 340.7 20.2 202 675-886 35-242 (307)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 338.4 19.3 201 675-888 57-263 (336)
10 3ubd_A Ribosomal protein S6 ki 1.0 1 1 337.2 13.5 201 676-885 24-230 (304)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=351.86 Aligned_cols=209 Identities=33% Similarity=0.535 Sum_probs=183.4
Q ss_pred HCCCCCCCEEECCCCEEEEEEEEC------CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEE
Q ss_conf 349886782411396599999987------99399999904666102588999999997159996234875874086468
Q 002566 675 TNNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLL 748 (907)
Q Consensus 675 t~~f~~~~~IG~G~fG~Vyk~~~~------~g~~VAVK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 748 (907)
.++|.+.+.||+|+||.||+|++. +++.||||+++.......++|.+|++++++++|||||+++|+|.+++..+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHHEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEE
T ss_conf 88929824982078829999998776667788799999967778589999999999998589988862879995699899
Q ss_pred EEEEECCCCCHHHHHHCCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEE
Q ss_conf 88641368942455515874--------2245899899999999999999999847999838708899997874999399
Q 002566 749 LVYEYMKNNCLSRAIFGKDT--------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAK 820 (907)
Q Consensus 749 LV~E~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~k 820 (907)
+||||+++|+|.++++.... .....++|.++++|+.|+|+||.|||+++ |+||||||+|||++.++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEE
T ss_conf 999858999689999860864211123577788999999999999999999997599---04676577638987998689
Q ss_pred EEECCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCC
Q ss_conf 963488500147885-21124345665344221114989954679999999999991-9999999999
Q 002566 821 ISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYRPN 886 (907)
Q Consensus 821 l~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLlt-G~~p~~~~~~ 886 (907)
|+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~ 236 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ECCCCCCEECCCCCCEEECCCEECCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 88730010067887416647513470103889870799970366778899999998089999999899
No 2
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=351.19 Aligned_cols=201 Identities=27% Similarity=0.524 Sum_probs=181.7
Q ss_pred HCCCCCCCEEECCCCEEEEEEEEC-CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEE
Q ss_conf 349886782411396599999987-9939999990466610258899999999715999623487587408646888641
Q 002566 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (907)
Q Consensus 675 t~~f~~~~~IG~G~fG~Vyk~~~~-~g~~VAVK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 753 (907)
.+.|+..++||+|+||.||+|++. +++.||||++........+.+.+|+.+++.++|||||++++++.+++.+|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 68438616962481848999999999989999998625546899999999999857998987168999989999999969
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf 36894245551587422458998999999999999999998479998387088999978749993999634885001478
Q 002566 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (907)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 833 (907)
+++|+|.+++... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 230 ~~gG~L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 230 LEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp CTTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCHHHHHHCC------CCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEECCCCCEEEECCCCCEECCCC
T ss_conf 8998289887616------9899999999999999999999889---044657877789858999898037265477788
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8521124345665344221114989954679999999999991999999999
Q 002566 834 KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 885 (907)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLltG~~p~~~~~ 885 (907)
... ....+||+.|||||++.+..|+.++||||+||++|||++|+.||....
T Consensus 301 ~~~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 351 (423)
T 4fie_A 301 VPR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 351 (423)
T ss_dssp CCC-BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CCC-CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 764-346664747279999779999968999999999999997879989869
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=350.86 Aligned_cols=208 Identities=31% Similarity=0.513 Sum_probs=182.9
Q ss_pred CCCCCCCEEECCCCEEEEEEEEC------CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEE
Q ss_conf 49886782411396599999987------993999999046661025889999999971599962348758740864688
Q 002566 676 NNFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (907)
Q Consensus 676 ~~f~~~~~IG~G~fG~Vyk~~~~------~g~~VAVK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~L 749 (907)
++|...++||+|+||.||+|+++ +++.||||+++.......++|.+|++++++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 99288779714778489989987866577896999999775797999999999999985899899969899998998999
Q ss_pred EEEECCCCCHHHHHHCCCCC----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCE
Q ss_conf 86413689424555158742----------24589989999999999999999984799983870889999787499939
Q 002566 750 VYEYMKNNCLSRAIFGKDTE----------YRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNA 819 (907)
Q Consensus 750 V~E~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~ 819 (907)
||||+++|+|.++++..... ...+++|.+++.|+.|+|+||.|||+++ |+||||||+|||++.++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC---EECCCCCHHHEEECCCCCE
T ss_conf 9982799939999986075410012211245788999999999999999999984088---4226666764898899968
Q ss_pred EEEECCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCC
Q ss_conf 9963488500147885-21124345665344221114989954679999999999991-9999999999
Q 002566 820 KISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYRPN 886 (907)
Q Consensus 820 kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLlt-G~~p~~~~~~ 886 (907)
||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~ 266 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH
T ss_pred EECCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCH
T ss_conf 976660333656787530047645565665826544799996630010578999998289999999899
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=349.86 Aligned_cols=201 Identities=27% Similarity=0.524 Sum_probs=181.1
Q ss_pred HCCCCCCCEEECCCCEEEEEEEEC-CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEE
Q ss_conf 349886782411396599999987-9939999990466610258899999999715999623487587408646888641
Q 002566 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (907)
Q Consensus 675 t~~f~~~~~IG~G~fG~Vyk~~~~-~g~~VAVK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 753 (907)
.+.|+..++||+|+||.||+|++. +++.||||++........+.+.+|+++++.++|||||++++++.+++.+|+||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 57538707960272829999999899989999998527656899999999999867998999199999989999999969
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCCC
Q ss_conf 36894245551587422458998999999999999999998479998387088999978749993999634885001478
Q 002566 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEED 833 (907)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~ 833 (907)
+++|+|.+++... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.....
T Consensus 153 ~~gg~L~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 153 LEGGALTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CTTEEHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred CCCCCHHHHHHCC------CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEECCCCCEECCCC
T ss_conf 8998089998718------9899999999999999999999888---355627889978879998899027575366788
Q ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8521124345665344221114989954679999999999991999999999
Q 002566 834 KTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 885 (907)
Q Consensus 834 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLltG~~p~~~~~ 885 (907)
... ....+||+.|||||++.+..++.++||||+||++|||++|+.||....
T Consensus 224 ~~~-~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~ 274 (346)
T 4fih_A 224 VPR-RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP 274 (346)
T ss_dssp SCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred CCC-CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 775-346562758279999779999968999999999999997879989859
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=349.65 Aligned_cols=203 Identities=24% Similarity=0.412 Sum_probs=179.6
Q ss_pred CCCCCCCEEECCCCEEEEEEEEC-CCCEEEEEEECCCC--CHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEE
Q ss_conf 49886782411396599999987-99399999904666--1025889999999971599962348758740864688864
Q 002566 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (907)
Q Consensus 676 ~~f~~~~~IG~G~fG~Vyk~~~~-~g~~VAVK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 752 (907)
++|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEE
T ss_conf 25588479702779399999988999899999986587897999999999999987799898919999998999999994
Q ss_pred ECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf 13689424555158742245899899999999999999999847999838708899997874999399963488500147
Q 002566 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (907)
Q Consensus 753 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 832 (907)
|+++|+|.+++..... ..+++.+++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 104 y~~gg~L~~~i~~~~~---~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 177 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG---VLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS 177 (350)
T ss_dssp CCTTCBHHHHHHHTTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred CCCCCCHHHHHHHCCC---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCCCHHHEEECCCCCEEECCCCCCEEECC
T ss_conf 8899839999997389---99978999999999999999999899---15135978997987899989764652144068
Q ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 88521124345665344221114989954679999999999991999999999
Q 002566 833 DKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 885 (907)
Q Consensus 833 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLltG~~p~~~~~ 885 (907)
... .....+||+.|||||++.+..++.++||||+||++|||++|+.||....
T Consensus 178 ~~~-~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 178 TVE-LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp HHH-HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred CCC-CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 854-1014578836039999879998959999999999999997879989969
No 6
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=1.00 E-value=1 Score=346.10 Aligned_cols=207 Identities=31% Similarity=0.458 Sum_probs=178.4
Q ss_pred CCCCCCEEECCCCEEEEEEEEC------CCCEEEEEEECCCCC-HHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEE
Q ss_conf 9886782411396599999987------993999999046661-025889999999971599962348758740864688
Q 002566 677 NFDPANKVGEGGFGSVYKGILS------DGTVIAVKQLSSKSR-QGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (907)
Q Consensus 677 ~f~~~~~IG~G~fG~Vyk~~~~------~g~~VAVK~~~~~~~-~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~L 749 (907)
++...++||+|+||.||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEE
T ss_conf 88586691358884899999857765888869999998801496899999999999985899898773649988998899
Q ss_pred EEEECCCCCHHHHHHCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCC
Q ss_conf 8641368942455515874-----------22458998999999999999999998479998387088999978749993
Q 002566 750 VYEYMKNNCLSRAIFGKDT-----------EYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLN 818 (907)
Q Consensus 750 V~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~ 818 (907)
||||+++|+|.+++..... .....++|.++++|+.|+|+||+|||+++ ||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCEEECCCCC
T ss_conf 99818999499999862765433332211112468999999999999999999998689---977873623068879997
Q ss_pred EEEEECCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCCCCC
Q ss_conf 99963488500147885-21124345665344221114989954679999999999991-9999999999
Q 002566 819 AKISDFGLAKLYEEDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVS-GKSNTNYRPN 886 (907)
Q Consensus 819 ~kl~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLlt-G~~p~~~~~~ 886 (907)
+||+|||+|+....... .......||++|||||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred EEECCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
T ss_conf 8988760202336777404734512577656989982799996300015799999999689999999899
No 7
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=342.54 Aligned_cols=201 Identities=26% Similarity=0.416 Sum_probs=179.7
Q ss_pred CCCCCCCEEECCCCEEEEEEEEC-CCCEEEEEEECCCC---CHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEE
Q ss_conf 49886782411396599999987-99399999904666---102588999999997159996234875874086468886
Q 002566 676 NNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKS---RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVY 751 (907)
Q Consensus 676 ~~f~~~~~IG~G~fG~Vyk~~~~-~g~~VAVK~~~~~~---~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~LV~ 751 (907)
++|++.+.||+|+||.||+|+.. +++.||+|++.+.. ....+.+.+|+++++.++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEEE
T ss_conf 23689889831648499999999999899999988888779789999999999998679989891999997389899999
Q ss_pred EECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEECCCCCCCC
Q ss_conf 41368942455515874224589989999999999999999984799983870889999787499939996348850014
Q 002566 752 EYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYE 831 (907)
Q Consensus 752 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 831 (907)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+.
T Consensus 112 Ey~~gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~ 183 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLS 183 (311)
T ss_dssp CCCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred ECCCCCCHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEEECCCCEECC
T ss_conf 6489989999998749-----9999999999999999999999887---8268787899698589888998768750257
Q ss_pred CCCC-CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 7885-2112434566534422111498995467999999999999199999999
Q 002566 832 EDKT-HISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYR 884 (907)
Q Consensus 832 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLltG~~p~~~~ 884 (907)
.... ......+||+.|||||++.+..++.++||||+||++|||++|+.||...
T Consensus 184 ~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~ 237 (311)
T 4aw0_A 184 PESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 237 (311)
T ss_dssp TTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 787765436755680307998976899996898998999999997498998997
No 8
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=340.75 Aligned_cols=202 Identities=29% Similarity=0.500 Sum_probs=173.3
Q ss_pred HCCCCCCCEEECCCCEEEEEEEECCCCEEEEEEECCC--CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEE
Q ss_conf 3498867824113965999999879939999990466--61025889999999971599962348758740864688864
Q 002566 675 TNNFDPANKVGEGGFGSVYKGILSDGTVIAVKQLSSK--SRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYE 752 (907)
Q Consensus 675 t~~f~~~~~IG~G~fG~Vyk~~~~~g~~VAVK~~~~~--~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~LV~E 752 (907)
.+++...++||+|+||.||+|++.+ .||||+++.. ..+..+.|.+|+.++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHEEEEEEEEECCCCEEEEEEECC--CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC-CEEEEEEE
T ss_conf 7994984498208886899999899--68999997268999999999999999985899887469999978-95899997
Q ss_pred ECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEECCCCCCCCC
Q ss_conf 13689424555158742245899899999999999999999847999838708899997874999399963488500147
Q 002566 753 YMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKLYEE 832 (907)
Q Consensus 753 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 832 (907)
|+++|+|.++++.... .+++.++..|+.|+|+||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 112 WCEGSSLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp CCSSCBHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred CCCCCCHHHHHHHCCC----CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEEEECCCCEECCC
T ss_conf 4899878898752489----9999999999999999999997799---52785578997888999089944157542466
Q ss_pred CCC-CCCCCCCCCCCCCCHHHHCC---CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 885-21124345665344221114---9899546799999999999919999999999
Q 002566 833 DKT-HISTRIAGTIGYMAPEYAMR---GYLTSKADVYSFGVVTLEIVSGKSNTNYRPN 886 (907)
Q Consensus 833 ~~~-~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~SlGiil~eLltG~~p~~~~~~ 886 (907)
... ......+||+.|||||++.+ ..++.++|||||||++|||++|+.||....+
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~ 242 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred CCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 7764031564468772498786146899878687757289999999978899899996
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=338.37 Aligned_cols=201 Identities=28% Similarity=0.321 Sum_probs=175.0
Q ss_pred HCCCCCCCEEECCCCEEEEEEEEC-CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEEEEE
Q ss_conf 349886782411396599999987-9939999990466610258899999999715999623487587408646888641
Q 002566 675 TNNFDPANKVGEGGFGSVYKGILS-DGTVIAVKQLSSKSRQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLLVYEY 753 (907)
Q Consensus 675 t~~f~~~~~IG~G~fG~Vyk~~~~-~g~~VAVK~~~~~~~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~LV~E~ 753 (907)
.+.|...++||+|+||.||+|+++ +++.||||+++.... +.+|+.+++.++|||||++++++.+++..++||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH-----HHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 3351768685138780999999889998999999788886-----99999999857998999399999989999999966
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCC-CEEEEECCCCCCCCC
Q ss_conf 3689424555158742245899899999999999999999847999838708899997874999-399963488500147
Q 002566 754 MKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDL-NAKISDFGLAKLYEE 832 (907)
Q Consensus 754 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~~~ 832 (907)
+++|+|.+++...+ .+++..+..++.|++.||+|||+++ |+||||||+|||++.++ .+||+|||+|+....
T Consensus 132 ~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG-----CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred CCCCCHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CEECCCCHHHEEEECCCCEEEEEECCCCEECCC
T ss_conf 59986999998769-----9999999999999999999999889---042616778879958999799962787768567
Q ss_pred CCCC----CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 8852----1124345665344221114989954679999999999991999999999965
Q 002566 833 DKTH----ISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRPNED 888 (907)
Q Consensus 833 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLltG~~p~~~~~~~~ 888 (907)
+... .....+||+.|||||++.+..++.++||||+||++|||++|+.||......+
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~ 263 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred CCCCCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 876540221785455802008999889998908999999999999997869989989999
No 10
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=337.23 Aligned_cols=201 Identities=27% Similarity=0.379 Sum_probs=177.1
Q ss_pred CCCCCCCEEECCCCEEEEEEEEC----CCCEEEEEEECCCC--CHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEE
Q ss_conf 49886782411396599999987----99399999904666--1025889999999971599962348758740864688
Q 002566 676 NNFDPANKVGEGGFGSVYKGILS----DGTVIAVKQLSSKS--RQGNREFVNEIGMISAQQHPNLVKLYGCCVEGNQLLL 749 (907)
Q Consensus 676 ~~f~~~~~IG~G~fG~Vyk~~~~----~g~~VAVK~~~~~~--~~~~~~f~~E~~~l~~l~H~nIv~l~g~~~~~~~~~L 749 (907)
++|++.+.||+|+||.||+|+.. .++.||+|+++... ......+.+|+++++.++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEE
T ss_conf 56589889721888399999985588789799999981577684789999999999987799799909999998999999
Q ss_pred EEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEEECCCCCC
Q ss_conf 86413689424555158742245899899999999999999999847999838708899997874999399963488500
Q 002566 750 VYEYMKNNCLSRAIFGKDTEYRLKLDWPTRKKICIGIARGLAYLHEDSRIKIVHRDIKTSNVLLDKDLNAKISDFGLAKL 829 (907)
Q Consensus 750 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~aL~yLH~~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 829 (907)
||||+++|+|.+++.... .+++.++..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+|+.
T Consensus 104 vmEy~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEECCCCCCHHHHHHHCC-----CCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHEEECCCCCEEECCCCCCEE
T ss_conf 997579988899997559-----9999999999999999999999779---95888878995786899887623663433
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 14788521124345665344221114989954679999999999991999999999
Q 002566 830 YEEDKTHISTRIAGTIGYMAPEYAMRGYLTSKADVYSFGVVTLEIVSGKSNTNYRP 885 (907)
Q Consensus 830 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~SlGiil~eLltG~~p~~~~~ 885 (907)
....... ....+||+.|||||++.+..++.++||||+||++|||++|+.||....
T Consensus 176 ~~~~~~~-~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 176 SIDHEKK-AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp -----CC-CCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CCCCCCC-CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 2688763-045441815079999656887877763611999999985989989849
Done!