BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002567
(907 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
Q+ K Y SPE++ G + +I+SLG++ FEL F ++ ++D+R+ PP F
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLF 249
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584
+ P E L P P+ RP I+++ V
Sbjct: 250 TQKYPCEYVMVQDMLSPSPMERPEAINIIENAV 282
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 314 NLREWLNARG--HKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
NL++W+N R + +R CL+IF QI V++ H++G+ DLKPS+ + VK
Sbjct: 101 NLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK 158
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
Q+ K Y SPE++ G + +I+SLG++ FEL F ++ ++D+R+ P F
Sbjct: 236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLF 295
Query: 552 LSENPKEAGFCLWQLHPEPLSRPTTREILQSEV 584
+ P+E L P P RP +I+++ +
Sbjct: 296 TQKYPQEHMMVQDMLSPSPTERPEATDIIENAI 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 314 NLREWLNARGHKGKRIE--CLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
NL++W+N R R CL+IF QI V++ H++G+ DLKPS+ + VK
Sbjct: 147 NLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVK 204
>pdb|3IZA|A Chain A, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|B Chain B, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|C Chain C, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|D Chain D, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|E Chain E, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|F Chain F, Structure Of An Apoptosome-Procaspase-9 Card Complex
pdb|3IZA|G Chain G, Structure Of An Apoptosome-Procaspase-9 Card Complex
Length = 1263
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 787 FDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS 846
F D A+ G K +++F+ + +E+ C + ++A+
Sbjct: 629 FSEDGQRIASCGADKTLQVFK--------AETGEKLLEIKAHEDEVLCCAFSTDDRFIAT 680
Query: 847 ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV-HPTKLASGSDDCSVKLWNINE 903
D VK+W++ TG+ V Y EH ++ F+ H LA+GS DC +KLW++N+
Sbjct: 681 CSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQ 738
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQV 882
++ +++SC C + +++ Y+A D +G +++ + + +H+K W + F+
Sbjct: 962 IDYLTEAQVSCCCLSPHLQ-YIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTAD 1020
Query: 883 HPTKLASGSDDCSVKLWN 900
T L S SDD +++WN
Sbjct: 1021 EKT-LISSSDDAEIQVWN 1037
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
L S +DG VK+W+ TG ++ H+ S D S TK +S S D + K+W+ +
Sbjct: 1064 LLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISH-DATKFSSTSADKTAKIWSFD 1121
>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A
Resolution Of 2.45 Angstrom
pdb|4AOW|B Chain B, Crystal Structure Of The Human Rack1 Protein At A
Resolution Of 2.45 Angstrom
pdb|4AOW|C Chain C, Crystal Structure Of The Human Rack1 Protein At A
Resolution Of 2.45 Angstrom
Length = 340
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
+ S +DG ++LWD TG T ++ H K SV FS + ++ SGS D ++KLWN
Sbjct: 100 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWN 156
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831
T F + S++F D + K IK L+N Y + S+ +
Sbjct: 121 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK------LWNTLGVCKYTVQDESHSEWV 174
Query: 832 SCVCWN-NYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASG 890
SCV ++ N + S +D +VK+W+ + +++I H +V S + ASG
Sbjct: 175 SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASG 233
Query: 891 SDDCSVKLWNINEN 904
D LW++NE
Sbjct: 234 GKDGQAMLWDLNEG 247
>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
Length = 317
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
+ S +DG ++LWD TG T ++ H K SV FS + ++ SGS D ++KLWN
Sbjct: 77 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWN 133
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 772 TGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKL 831
T F + S++F D + K IK L+N Y + S+ +
Sbjct: 98 TRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK------LWNTLGVCKYTVQDESHSEWV 151
Query: 832 SCVCWN-NYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASG 890
SCV ++ N + S +D +VK+W+ + +++I H +V S + ASG
Sbjct: 152 SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSP-DGSLCASG 210
Query: 891 SDDCSVKLWNINEN 904
D LW++NE
Sbjct: 211 GKDGQAMLWDLNEG 224
>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1
Length = 1249
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 787 FDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS 846
F +D A+ G K +++F+ + +++ C + +Y+A+
Sbjct: 623 FSQDGQRIASCGADKTLQVFK--------AETGEKLLDIKAHEDEVLCCAFSSDDSYIAT 674
Query: 847 ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS-QVHPTKLASGSDDCSVKLWNINE 903
D VK+WD+ TG+ V Y EH ++ F+ + + LA+GS+D +KLW++N+
Sbjct: 675 CSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 829 SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLA 888
+++SC C + +++ Y+A D DG +K+ + + S + H+K + F+ T L
Sbjct: 962 AQVSCCCLSPHLE-YVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKT-LI 1019
Query: 889 SGSDDCSVKLWN 900
S S+D +++WN
Sbjct: 1020 SSSEDSVIQVWN 1031
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
L S +DG VK+W+ TG+ + H+ S S TK +S S D + K+W+ +
Sbjct: 1058 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISS-DATKFSSTSADKTAKIWSFD 1115
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
L S+ D V+++W+ TG V E DF + ++L S S D +VK+WN+
Sbjct: 1018 LISSSEDSVIQVWNWQTGDYVFLQAHQETVK---DFRLLQDSRLLSWSFDGTVKVWNV 1072
>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length
Murine Apaf-1
Length = 1256
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 787 FDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS 846
F +D A+ G K +++F+ + +++ C + +Y+A+
Sbjct: 630 FSQDGQRIASCGADKTLQVFK--------AETGEKLLDIKAHEDEVLCCAFSSDDSYIAT 681
Query: 847 ADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFS-QVHPTKLASGSDDCSVKLWNINE 903
D VK+WD+ TG+ V Y EH ++ F+ + + LA+GS+D +KLW++N+
Sbjct: 682 CSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 739
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 829 SKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLA 888
+++SC C + +++ Y+A D DG +K+ + + S + H+K + F+ T L
Sbjct: 969 AQVSCCCLSPHLE-YVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKT-LI 1026
Query: 889 SGSDDCSVKLWN 900
S S+D +++WN
Sbjct: 1027 SSSEDSVIQVWN 1038
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
L S +DG VK+W+ TG+ + H+ S S TK +S S D + K+W+ +
Sbjct: 1065 LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISS-DATKFSSTSADKTAKIWSFD 1122
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
L S+ D V+++W+ TG V E DF + ++L S S D +VK+WN+
Sbjct: 1025 LISSSEDSVIQVWNWQTGDYVFLQAHQETVK---DFRLLQDSRLLSWSFDGTVKVWNV 1079
>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a
Cryo-em Map Of Yeast 80s Ribosome
Length = 314
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
Y SA +D ++LWD TG+T ++ H+ SVD + + + SGS D ++K+W I
Sbjct: 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK 137
Query: 903 ENIL 906
L
Sbjct: 138 GQCL 141
>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
pdb|3O2Z|T Chain T, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
pdb|3O30|T Chain T, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
pdb|3U5C|GG Chain g, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
pdb|3U5G|GG Chain g, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
Length = 319
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
Y SA +D ++LWD TG+T ++ H+ SVD + + + SGS D ++K+W I
Sbjct: 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK 137
Query: 903 ENIL 906
L
Sbjct: 138 GQCL 141
>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 313
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
Y SA +D ++LWD TG+T ++ H+ SVD + + + SGS D ++K+W I
Sbjct: 73 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK 131
Query: 903 ENIL 906
L
Sbjct: 132 GQCL 135
>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
pdb|3RFH|B Chain B, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
pdb|3RFH|C Chain C, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
pdb|3RFH|D Chain D, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P21
Length = 319
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
Y SA +D ++LWD TG+T ++ H+ SVD + + + SGS D ++K+W I
Sbjct: 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK 137
Query: 903 ENIL 906
L
Sbjct: 138 GQCL 141
>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P63
pdb|3RFG|B Chain B, Crystal Structure Of The Yeast Rack1 Dimer In Space Group
P63
Length = 319
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
Y SA +D ++LWD TG+T ++ H+ SVD + + + SGS D ++K+W I
Sbjct: 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK 137
Query: 903 ENIL 906
L
Sbjct: 138 GQCL 141
>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure
pdb|2YMU|B Chain B, Structure Of A Highly Repetitive Propeller Structure
Length = 577
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841
+ ++F D A+A K +K++ N ++ + +V S
Sbjct: 347 VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSP---------DG 397
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
+ASA D VKLW+ GQ + H W V FS T +AS SDD +VKLWN
Sbjct: 398 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQT-IASASDDKTVKLWNR 455
Query: 902 NENIL 906
N +L
Sbjct: 456 NGQLL 460
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841
+ ++F D A+A K +K++ N ++ + +V S
Sbjct: 60 VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSP---------DG 110
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
+ASA D VKLW+ GQ + H W V FS T +AS SDD +VKLWN
Sbjct: 111 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKLWNR 168
Query: 902 NENIL 906
N +L
Sbjct: 169 NGQLL 173
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSVDVYYPAVEMSNRSKLSCVCW 836
+ ++F D A+A K +K++ N L S V+ A ++
Sbjct: 101 VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT------- 153
Query: 837 NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896
+ASA D VKLW+ GQ + H W V FS T +AS SDD +V
Sbjct: 154 -------IASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTV 204
Query: 897 KLWNINENIL 906
KLWN N +L
Sbjct: 205 KLWNRNGQLL 214
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSVDVYYPAVEMSNRSKLSCVCW 836
+ ++F D A+A K +K++ N L S V+ A ++
Sbjct: 265 VNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT------- 317
Query: 837 NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896
+ASA D VKLW+ GQ + H W V FS T +AS SDD +V
Sbjct: 318 -------IASASDDKTVKLWNR-NGQHLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTV 368
Query: 897 KLWNINENIL 906
KLWN N +L
Sbjct: 369 KLWNRNGQLL 378
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903
+ASA D VKLW+ GQ + H W V FS T +AS SDD +VKLWN N
Sbjct: 31 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQT-IASASDDKTVKLWNRNG 88
Query: 904 NIL 906
+L
Sbjct: 89 QLL 91
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 54/125 (43%), Gaps = 11/125 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841
+ ++F D+ A+A K +K++ N ++ + +V S
Sbjct: 429 VWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSP---------DG 479
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
+ASA D VKLW+ GQ + H V FS T +AS SDD +VKLWN
Sbjct: 480 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTVKLWNR 537
Query: 902 NENIL 906
N +L
Sbjct: 538 NGQLL 542
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 21/130 (16%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSVDVYYPAVEMSNRSKLSCVCW 836
+ ++F D A+A K +K++ N L S V+ A ++
Sbjct: 142 VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT------- 194
Query: 837 NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896
+ASA D VKLW+ GQ + H V FS T +AS SDD +V
Sbjct: 195 -------IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTV 245
Query: 897 KLWNINENIL 906
KLWN N +L
Sbjct: 246 KLWNRNGQLL 255
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 21/130 (16%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSVDVYYPAVEMSNRSKLSCVCW 836
+ ++F D A+A K +K++ N L S V+ A ++
Sbjct: 306 VWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQT------- 358
Query: 837 NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896
+ASA D VKLW+ GQ + H V FS T +AS SDD +V
Sbjct: 359 -------IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTV 409
Query: 897 KLWNINENIL 906
KLWN N +L
Sbjct: 410 KLWNRNGQLL 419
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSVDVYYPAVEMSNRSKLSCVCW 836
+ ++F D A+A K +K++ N L S V+ A +++
Sbjct: 388 VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQT------- 440
Query: 837 NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896
+ASA D VKLW+ GQ + H V FS T +AS SDD +V
Sbjct: 441 -------IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTV 491
Query: 897 KLWNINENIL 906
KLWN N +L
Sbjct: 492 KLWNRNGQLL 501
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 21/130 (16%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNA-----LFNDSVDVYYPAVEMSNRSKLSCVCW 836
+ ++F D A+A K +K++ N L S V+ A ++
Sbjct: 19 VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT------- 71
Query: 837 NNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896
+ASA D VKLW+ GQ + H V FS T +AS SDD +V
Sbjct: 72 -------IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQT-IASASDDKTV 122
Query: 897 KLWNINENIL 906
KLWN N +L
Sbjct: 123 KLWNRNGQLL 132
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841
+ ++F D A+A K +K++ N ++ + +V S
Sbjct: 183 VWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSP---------DG 233
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
+ASA D VKLW+ GQ + H V F T +AS SDD +VKLWN
Sbjct: 234 QTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQT-IASASDDKTVKLWNR 291
Query: 902 NENIL 906
N +L
Sbjct: 292 NGQLL 296
>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1.
pdb|3FRX|B Chain B, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1.
pdb|3FRX|C Chain C, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1.
pdb|3FRX|D Chain D, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1
Length = 319
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
Y SA +D ++LWD TG+T ++ H+ SVD + + + SGS D ++K+W I
Sbjct: 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDIDK-KASXIISGSRDKTIKVWTIK 137
Query: 903 ENIL 906
L
Sbjct: 138 GQCL 141
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPK 557
Y SPE++S ++Y+LG++ EL D+ + +DLRD I+ F + K
Sbjct: 201 YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DKK 257
Query: 558 EAGFCLWQLHPEPLSRPTTREILQS 582
E L +P RP T EIL++
Sbjct: 258 EKTLLQKLLSKKPEDRPNTSEILRT 282
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 315 LREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
L +W+ R G K ++ L +F QI VDY H++ + DLKPS+ L+ + QVK
Sbjct: 121 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVK 176
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSFLSENPK 557
Y SPE++S ++Y+LG++ EL D+ + +DLRD I+ F + K
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DKK 243
Query: 558 EAGFCLWQLHPEPLSRPTTREILQS 582
E L +P RP T EIL++
Sbjct: 244 EKTLLQKLLSKKPEDRPNTSEILRT 268
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 315 LREWLNAR-GHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
L +W+ R G K ++ L +F QI VDY H++ + DLKPS+ L+ + QVK
Sbjct: 107 LEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162
>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex
pdb|2OVQ|B Chain B, Structure Of The Skp1-Fbw7-Cyclinedegc Complex
pdb|2OVR|B Chain B, Structure Of The Skp1-Fbw7-Cyclinedegn Complex
Length = 445
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 823 VEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQ 881
V M + + + CV Y + S YD +VK+WD T +T H ++ H R +S+ F
Sbjct: 234 VLMGHVAAVRCV---QYDGRRVVSGAYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQFDG 289
Query: 882 VHPTKLASGSDDCSVKLWNI 901
+H + SGS D S+++W++
Sbjct: 290 IH---VVSGSLDTSIRVWDV 306
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 839 YIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKL 898
+ N + S D +K+W A TG+ + + H WS SQ+ + SGS D ++K+
Sbjct: 127 FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWS---SQMRDNIIISGSTDRTLKV 183
Query: 899 WN 900
WN
Sbjct: 184 WN 185
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
N L S + D VK+WD TGQ + K +V Q + + + SDD +VKLW++
Sbjct: 330 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 389
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 836 WNNYIK-NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC 894
W++ ++ N + S D +K+W+A TG+ + H +V +H ++ SGS D
Sbjct: 163 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS---TVRCMHLHEKRVVSGSRDA 219
Query: 895 SVKLWNI 901
++++W+I
Sbjct: 220 TLRVWDI 226
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 827 NRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHE 871
++S ++C+ +N KN++ ++ DG VKLWD TG+ + + + E
Sbjct: 361 HQSAVTCLQFN---KNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 402
>pdb|4I79|A Chain A, Crystal Structure Of Human Nup43
pdb|4I79|B Chain B, Crystal Structure Of Human Nup43
Length = 399
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 776 NNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVC 835
N ++ + +++F R + + + +KI++F N+ + +R L CV
Sbjct: 188 NADSSTLHAVTFLRTPEILTVNSIGQ-LKIWDFRQQGNEPSQILS---LTGDRVPLHCVD 243
Query: 836 WNNYIKNYLASADYDGVVKLWDACTG-QTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDC 894
+ ++ +A+ DG++ +WD G VS HE W V F +P L + S+D
Sbjct: 244 RHPNQQHVVATGGQDGMLSIWDVRQGTMPVSLLKAHEAEMWEVHFHPSNPEHLFTCSEDG 303
Query: 895 SVKLWNINENI 905
S+ W+ + ++
Sbjct: 304 SLWHWDASTDV 314
>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana
Length = 694
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
+ S +DG ++LWD G + ++ H K SV FS + ++ S S D ++KLWN
Sbjct: 444 FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFS-LDNRQIVSASRDRTIKLWN 500
>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex
Of The Copi Vesicular Coat
pdb|3MKQ|C Chain C, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex
Of The Copi Vesicular Coat
pdb|3MKQ|E Chain E, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex
Of The Copi Vesicular Coat
Length = 814
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
KN++ D +++++ TG+ V + H S+ VHPTK + SGSDD +VKL
Sbjct: 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI---AVHPTKPYVLSGSDDLTVKL 123
Query: 899 WNINENILL 907
WN N L
Sbjct: 124 WNWENNWAL 132
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
K Y+ +A D +K+WD T V+ H +V F+ HPT + SGS+D ++K+
Sbjct: 198 KPYMITASDDLTIKIWDYQTKSCVATLEGHMS---NVSFAVFHPTLPIIISGSEDGTLKI 254
Query: 899 WN 900
WN
Sbjct: 255 WN 256
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899
K Y+ S D VKLW+ + E HE V F+ P+ ASG D +VK+W
Sbjct: 109 KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168
Query: 900 NINE 903
++ +
Sbjct: 169 SLGQ 172
>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif
Length = 604
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
KN++ D +++++ TG+ V + H S+ VHPTK + SGSDD +VKL
Sbjct: 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI---AVHPTKPYVLSGSDDLTVKL 123
Query: 899 WNINENILL 907
WN N L
Sbjct: 124 WNWENNWAL 132
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
K Y+ +A D +K+WD T V+ H +V F+ HPT + SGS+D ++K+
Sbjct: 198 KPYMITASDDLTIKIWDYQTKSCVATLEGHMS---NVSFAVFHPTLPIIISGSEDGTLKI 254
Query: 899 WN 900
WN
Sbjct: 255 WN 256
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899
K Y+ S D VKLW+ + E HE V F+ P+ ASG D +VK+W
Sbjct: 109 KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168
Query: 900 NINE 903
++ +
Sbjct: 169 SLGQ 172
>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6
pdb|2YNO|B Chain B, Yeast Betaprime Cop 1-304h6
Length = 310
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
KN++ D +++++ TG+ V + H S+ VHPTK + SGSDD +VKL
Sbjct: 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI---AVHPTKPYVLSGSDDLTVKL 123
Query: 899 WNINENILL 907
WN N L
Sbjct: 124 WNWENNWAL 132
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
K Y+ +A D +K+WD T V+ H +V F+ HPT + SGS+D ++K+
Sbjct: 198 KPYMITASDDLTIKIWDYQTKSCVATLEGHMS---NVSFAVFHPTLPIIISGSEDGTLKI 254
Query: 899 WN 900
WN
Sbjct: 255 WN 256
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899
K Y+ S D VKLW+ + E HE V F+ P+ ASG D +VK+W
Sbjct: 109 KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168
Query: 900 NINEN 904
++ ++
Sbjct: 169 SLGQS 173
>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif
Length = 304
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
KN++ D +++++ TG+ V + H S+ VHPTK + SGSDD +VKL
Sbjct: 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSI---AVHPTKPYVLSGSDDLTVKL 123
Query: 899 WNINENILL 907
WN N L
Sbjct: 124 WNWENNWAL 132
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKL 898
K Y+ +A D +K+WD T V+ H +V F+ HPT + SGS+D ++K+
Sbjct: 198 KPYMITASDDLTIKIWDYQTKSCVATLEGHMS---NVSFAVFHPTLPIIISGSEDGTLKI 254
Query: 899 WN 900
WN
Sbjct: 255 WN 256
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHPTKLASGSDDCSVKLW 899
K Y+ S D VKLW+ + E HE V F+ P+ ASG D +VK+W
Sbjct: 109 KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168
Query: 900 NINEN 904
++ ++
Sbjct: 169 SLGQS 173
>pdb|3JPX|A Chain A, Eed: A Novel Histone Trimethyllysine Binder Within The
Eed-Ezh2 Polycomb Complex
pdb|3JZG|A Chain A, Structure Of Eed In Complex With H3k27me3
pdb|3JZH|A Chain A, Eed-H3k79me3
Length = 402
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903
LA A G++++ + T Q + HY+ H + F P L S S D +++LWNI
Sbjct: 124 LAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 183
Query: 904 NILL 907
+ L+
Sbjct: 184 DTLV 187
>pdb|2QXV|A Chain A, Structural Basis Of Ezh2 Recognition By Eed
Length = 361
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903
LA A G++++ + T Q + HY+ H + F P L S S D +++LWNI
Sbjct: 83 LAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 142
Query: 904 NILL 907
+ L+
Sbjct: 143 DTLV 146
>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
pdb|1ERJ|B Chain B, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
pdb|1ERJ|C Chain C, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1
Length = 393
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 779 ANVICSISFDRDEDHFAAAGVSKKIKIFEFN------ALFNDSVDVYYP-----AVEMSN 827
+V+C + F D ++ A G +K +++ + L +DS P + S+
Sbjct: 64 TSVVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSS 122
Query: 828 RSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPT-- 885
+ VC++ K +LA+ D ++++WD + V HE+ +S+D+ P+
Sbjct: 123 DLYIRSVCFSPDGK-FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY---FPSGD 178
Query: 886 KLASGSDDCSVKLWNI 901
KL SGS D +V++W++
Sbjct: 179 KLVSGSGDRTVRIWDL 194
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHY-------IEHEKRAWSVDFSQVHPTKLASGSDDCS 895
Y+A+ D V++WD+ TG V H+ +SV F++ + SGS D S
Sbjct: 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRS 279
Query: 896 VKLWNI 901
VKLWN+
Sbjct: 280 VKLWNL 285
>pdb|3IIW|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H3k27 Peptide
Length = 365
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903
LA A G++++ + T Q + HY+ H + F P L S S D +++LWNI
Sbjct: 87 LAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 146
Query: 904 NILL 907
+ L+
Sbjct: 147 DTLV 150
>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f)
Length = 315
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 209 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268
Query: 901 I 901
+
Sbjct: 269 L 269
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 29 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 79
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 80 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 138
Query: 901 INENILL 907
+ L
Sbjct: 139 VKTGKCL 145
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 167 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 224
Query: 902 NENILL 907
++ L
Sbjct: 225 SKGKCL 230
>pdb|3JZN|A Chain A, Structure Of Eed In Apo Form
pdb|3K26|A Chain A, Complex Structure Of Eed And Trimethylated H3k4
pdb|3K27|A Chain A, Complex Structure Of Eed And Trimethylated H3k9
Length = 366
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903
LA A G++++ + T Q + HY+ H + F P L S S D +++LWNI
Sbjct: 88 LAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147
Query: 904 NILL 907
+ L+
Sbjct: 148 DTLV 151
>pdb|3IIY|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H1k26 Peptide
pdb|3IJ0|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H3k9 Peptide
pdb|3IJ1|A Chain A, Crystal Structure Of Eed In Complex With A Trimethylated
Histone H4k20 Peptide
pdb|3IJC|A Chain A, Crystal Structure Of Eed In Complex With Ndsb-195
Length = 365
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903
LA A G++++ + T Q + HY+ H + F P L S S D +++LWNI
Sbjct: 87 LAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 146
Query: 904 NILL 907
+ L+
Sbjct: 147 DTLV 150
>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1
Angstrom
pdb|2CO0|C Chain C, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 209 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 268
Query: 901 I 901
+
Sbjct: 269 L 269
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 29 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 79
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 80 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 138
Query: 901 INENILL 907
+ + L
Sbjct: 139 VKTGMCL 145
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 167 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 224
Query: 902 NENILL 907
++ L
Sbjct: 225 SKGKCL 230
>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y)
Length = 315
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 209 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268
Query: 901 I 901
+
Sbjct: 269 L 269
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 29 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 79
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 80 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 138
Query: 901 INENILL 907
+ L
Sbjct: 139 VKTGKCL 145
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 167 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 224
Query: 902 NENILL 907
++ L
Sbjct: 225 SKGKCL 230
>pdb|2H9L|A Chain A, Wdr5delta23
pdb|2H9P|A Chain A, Wdr5 In Complex With Trimethylated H3k4 Peptide
Length = 329
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 223 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 282
Query: 901 I 901
+
Sbjct: 283 L 283
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 43 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 93
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 94 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 152
Query: 901 I 901
+
Sbjct: 153 V 153
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 843 YLASADYDGVVKLWDACTG---QTVS-HYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKL 898
+LAS+ D ++K+W A G +T+S H + AWS D L S SDD ++K+
Sbjct: 54 WLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD-----SNLLVSASDDKTLKI 108
Query: 899 WNINENILL 907
W+++ L
Sbjct: 109 WDVSSGKCL 117
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 181 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 238
Query: 902 NENILL 907
++ L
Sbjct: 239 SKGKCL 244
>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
Site
pdb|2XL2|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
Site
pdb|2XL3|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3
Peptide
pdb|2XL3|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3
Peptide
Length = 334
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 228 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 901 I 901
+
Sbjct: 288 L 288
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 48 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 98
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 99 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 157
Query: 901 INENILL 907
+ L
Sbjct: 158 VKTGKCL 164
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 186 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 243
Query: 902 NENILL 907
++ L
Sbjct: 244 SKGKCL 249
>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a)
Length = 315
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 209 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 268
Query: 901 I 901
+
Sbjct: 269 L 269
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + AA+ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 29 VSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 79
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 80 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 138
Query: 901 INENILL 907
+ L
Sbjct: 139 VKTGKCL 145
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 167 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 224
Query: 902 NENILL 907
++ L
Sbjct: 225 SKGKCL 230
>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction
Length = 318
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 212 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271
Query: 901 I 901
+
Sbjct: 272 L 272
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 32 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 82
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 83 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 141
Query: 901 INENILL 907
+ L
Sbjct: 142 VKTGKCL 148
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 47/268 (17%)
Query: 651 PLVDPSLQNESAPSRENRYFNEQLSS-----SEAQLSP----ISDANEMRLMRNLNQLER 701
PL P Q++ P + N L+ S + SP ++ ++ +L++ +
Sbjct: 2 PLGSPEFQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 61
Query: 702 AYFSMRSQIQLSDSDSTTRADNDLLRDRENLFLAQQDQEIQNPTDRLGAFFDGLCKYARY 761
+ S +L SD +D++LL A D+ ++ G L ++ Y
Sbjct: 62 KFEKTISGHKLGISDVAWSSDSNLLVS------ASDDKTLKIWDVSSGKCLKTLKGHSNY 115
Query: 762 SKFEVQGMLRTGEFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYP 821
+ FN +N+I S SFD + K K + +D V
Sbjct: 116 --------VFCCNFNPQSNLIVSGSFDESVRIWDV----KTGKCLKTLPAHSDPVS---- 159
Query: 822 AVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQ 881
AV + L + S+ YDG+ ++WD +GQ + I+ + V F +
Sbjct: 160 AVHFNRDGSL------------IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVK 205
Query: 882 VHPTK--LASGSDDCSVKLWNINENILL 907
P + + + D ++KLW+ ++ L
Sbjct: 206 FSPNGKYILAATLDNTLKLWDYSKGKCL 233
>pdb|2GNQ|A Chain A, Structure Of Wdr5
Length = 336
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 230 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 289
Query: 901 I 901
+
Sbjct: 290 L 290
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 50 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 100
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 101 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 159
Query: 901 INENILL 907
+ L
Sbjct: 160 VKTGKCL 166
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 188 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 245
Query: 902 NENILL 907
++ L
Sbjct: 246 SKGKCL 251
>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3PSL|B Chain B, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
Activity By A Histone H3 Based Peptide Mimetic
pdb|3UVK|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll2
pdb|3UVL|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll3
pdb|3UVM|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Mll4
pdb|3UVN|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVN|C Chain C, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1a
pdb|3UVO|A Chain A, Crystal Structure Of Wdr5 In Complex With The
Wdr5-Interacting Motif Of Set1b
Length = 318
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 212 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271
Query: 901 I 901
+
Sbjct: 272 L 272
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 32 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 82
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 83 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 141
Query: 901 INENILL 907
+ L
Sbjct: 142 VKTGKCL 148
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 170 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 227
Query: 902 NENILL 907
++ L
Sbjct: 228 SKGKCL 233
>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
Length = 311
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 205 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 264
Query: 901 I 901
+
Sbjct: 265 L 265
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 25 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 75
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 76 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 134
Query: 901 INENILL 907
+ L
Sbjct: 135 VKTGKCL 141
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 163 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 220
Query: 902 NENILL 907
++ L
Sbjct: 221 SKGKCL 226
>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel
Histone Mark That Supports Euchromatin Maintenance
Length = 318
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 212 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 271
Query: 901 I 901
+
Sbjct: 272 L 272
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 32 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 82
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 83 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 141
Query: 901 INENILL 907
+ L
Sbjct: 142 VKTGKCL 148
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 170 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 227
Query: 902 NENILL 907
++ L
Sbjct: 228 SKGKCL 233
>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX
pdb|2H14|A Chain A, Crystal Of Wdr5 (Apo-Form)
pdb|3P4F|A Chain A, Structural And Biochemical Insights Into Mll1 Core Complex
Assembly And Regulation
Length = 317
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 211 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 270
Query: 901 I 901
+
Sbjct: 271 L 271
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 31 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 81
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 82 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 140
Query: 901 INENILL 907
+ L
Sbjct: 141 VKTGKCL 147
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 169 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 226
Query: 902 NENILL 907
++ L
Sbjct: 227 SKGKCL 232
>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
pdb|2G99|B Chain B, Structural Basis For The Specific Recognition Of
Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
Length = 308
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 202 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 261
Query: 901 I 901
+
Sbjct: 262 L 262
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 22 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 72
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 73 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 131
Query: 901 INENILL 907
+ L
Sbjct: 132 VKTGKCL 138
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 160 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 217
Query: 902 NENILL 907
++ L
Sbjct: 218 SKGKCL 223
>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9M|C Chain C, Wdr5 In Complex With Unmodified H3k4 Peptide
pdb|2H9N|A Chain A, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2H9N|C Chain C, Wdr5 In Complex With Monomethylated H3k4 Peptide
pdb|2O9K|A Chain A, Wdr5 In Complex With Dimethylated H3k4 Peptide
pdb|2O9K|C Chain C, Wdr5 In Complex With Dimethylated H3k4 Peptide
Length = 313
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 207 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 266
Query: 901 I 901
+
Sbjct: 267 L 267
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 27 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSS-D 77
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 78 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 136
Query: 901 INENILL 907
+ L
Sbjct: 137 VKTGKCL 143
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 165 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 222
Query: 902 NENILL 907
++ L
Sbjct: 223 SKGKCL 228
>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|C Chain C, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3SMR|D Chain D, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3UR4|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|3UR4|B Chain B, Crystal Structure Of Human Wd Repeat Domain 5 With
Compound
pdb|4IA9|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 In Complex
With 2-
Chloro-4-Fluoro-3-Methyl-N-[2-(4-Methylpiperazin-1-Yl)-
5- Nitrophenyl]benzamide
Length = 312
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 206 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 265
Query: 901 I 901
+
Sbjct: 266 L 266
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 76
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 135
Query: 901 INENILL 907
+ L
Sbjct: 136 VKTGKCL 142
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 164 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 221
Query: 902 NENILL 907
++ L
Sbjct: 222 SKGKCL 227
>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H68|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6K|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6K|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6N|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6N|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6Q|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|2H6Q|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
Of The Mll1 Complex
pdb|3EG6|A Chain A, Structure Of Wdr5 Bound To Mll1 Peptide
pdb|4ERQ|A Chain A, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|B Chain B, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERQ|C Chain C, X-Ray Structure Of Wdr5-Mll2 Win Motif Peptide Binary
Complex
pdb|4ERY|A Chain A, X-Ray Structure Of Wdr5-Mll3 Win Motif Peptide Binary
Complex
pdb|4ERZ|A Chain A, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|B Chain B, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ERZ|C Chain C, X-Ray Structure Of Wdr5-Mll4 Win Motif Peptide Binary
Complex
pdb|4ES0|A Chain A, X-Ray Structure Of Wdr5-Setd1b Win Motif Peptide Binary
Complex
pdb|4ESG|A Chain A, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4ESG|B Chain B, X-Ray Structure Of Wdr5-Mll1 Win Motif Peptide Binary
Complex
pdb|4EWR|A Chain A, X-Ray Structure Of Wdr5-Setd1a Win Motif Peptide Binary
Complex
Length = 312
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 206 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 265
Query: 901 I 901
+
Sbjct: 266 L 266
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 26 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 76
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 77 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 135
Query: 901 INENILL 907
+ L
Sbjct: 136 VKTGKCL 142
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D ++KLW+
Sbjct: 164 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDY 221
Query: 902 NENILL 907
++ L
Sbjct: 222 SKGKCL 227
>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
Length = 315
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIF-EFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYI 840
+ S+ F + + A++ K IKI+ ++ F ++ ++ +S V W++
Sbjct: 29 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GHKLGISDVAWSSD- 79
Query: 841 KNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
N L SA D +K+WD +G+ + H + +F+ + SGS D SV++W+
Sbjct: 80 SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWD 138
Query: 901 INENILL 907
+ + L
Sbjct: 139 VKTGMCL 145
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSV--DFSQVHPTKLASGSDDCSVKLWN 900
Y+ +A D +KLWD G+ + Y H+ + + +FS + SGS+D V +WN
Sbjct: 209 YILAATLDNDLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 268
Query: 901 I 901
+
Sbjct: 269 L 269
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTK--LASGSDDCSVKLWNI 901
+ S+ YDG+ ++WD +GQ + I+ + V F + P + + + D +KLW+
Sbjct: 167 IVSSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNDLKLWDY 224
Query: 902 NENILL 907
++ L
Sbjct: 225 SKGKCL 230
>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1
Length = 330
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 844 LASADYDGVVKLWDACT--GQTVSHYIEHEKRAWSVDFSQVHPT-KLASGSDDCSVKLW 899
LAS+ YD V++W + V+ HE WS DF + +L SGSDD +V++W
Sbjct: 168 LASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226
>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
pdb|2XZN|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
Length = 343
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 26/148 (17%)
Query: 770 LRTG----EFNNSANVICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEM 825
LRTG F + + S++F D +AG ++IK L+N + + + E
Sbjct: 105 LRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIK------LWNILGECKFSSAEK 158
Query: 826 SNRSK-LSCVCWNNYIKN---------YLASADYDGVVKLWDACTGQTVSHYIEHEKRAW 875
N S +SCV ++ +K+ Y AS +DG +K+W+ Q + HE
Sbjct: 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHES--- 214
Query: 876 SVDFSQVHPTK--LASGSDDCSVKLWNI 901
+V+ + P +A+G D + +W+I
Sbjct: 215 NVNHLSISPNGKYIATGGKDKKLLIWDI 242
>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form
Length = 402
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Query: 751 FFDGLCKYARYSKFEVQGMLRTGEFNNSANVICS-------ISFDRDEDHFAAAGVSKKI 803
F +C+ + F V + +TG + + ++C I++ D+ A+G S+
Sbjct: 46 FMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASG-SEDC 104
Query: 804 KIFEFNALFNDSV-DVYYPAVEMSNRSK-LSCVCWNNYIKNYLASADYDGVVKLWDACTG 861
+ + V + P + + +K + V W+ +N L SA D V+ +WD TG
Sbjct: 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG 164
Query: 862 QTVSHYIE--HEKRAWSVDFSQ 881
V H +SVD+S+
Sbjct: 165 AAVLTLGPDVHPDTIYSVDWSR 186
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 191 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 247
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P+ RPT EI L+ ++ F EV
Sbjct: 248 LDQPDNCPERVTDLMRMCWQFNPK--MRPTFLEIVNLLKDDLHPSFPEV 294
>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
Length = 318
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
N+ SA +D ++LW+ GQ ++ H K SV FS + ++ SG D ++++WN+
Sbjct: 80 NFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDN-RQIVSGGRDNALRVWNV 138
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 782 ICSISFDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIK 841
+ S++F D + G ++++ + + ++ +SCV ++ +
Sbjct: 112 VLSVAFSPDNRQIVSGGRDNALRVWNVKG------ECMHTLSRGAHTDWVSCVRFSPSLD 165
Query: 842 N-YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWN 900
+ S +D +VK+WD TG+ V+ H SV S + AS D +LW+
Sbjct: 166 APVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSP-DGSLCASSDKDGVARLWD 224
Query: 901 INE 903
+ +
Sbjct: 225 LTK 227
>pdb|1R5M|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Sif2
Length = 425
Score = 36.2 bits (82), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNINE 903
L SA DG +++W G + + + H + V S V K+ S S D SV+LW++ +
Sbjct: 262 LLSASDDGTLRIWHGGNGNSQNCFYGHSQSI--VSASWVGDDKVISCSMDGSVRLWSLKQ 319
Query: 904 NILL 907
N LL
Sbjct: 320 NTLL 323
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 193 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 249
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P+ RPT EI L+ ++ F EV
Sbjct: 250 LDQPDNCPERVTDLMRMCWQFNPK--MRPTFLEIVNLLKDDLHPSFPEV 296
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 194 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 250
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P+ RPT EI L+ ++ F EV
Sbjct: 251 LDQPDNCPERVTDLMRMCWQFNPK--MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 194 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 250
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P+ RPT EI L+ ++ F EV
Sbjct: 251 LDQPDNCPERVTDLMRMCWQFNPK--MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 194 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 250
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P+ RPT EI L+ ++ F EV
Sbjct: 251 LDQPDNCPERVTDLMRMCWQFNPK--MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|2PM9|A Chain A, Crystal Structure Of Yeast Sec1331 VERTEX ELEMENT OF THE
Copii Vesicular Coat
Length = 416
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 770 LRTGEFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNR 828
L G+ +S + + S+++++ H FA+AG S I++ A + + + Y + +
Sbjct: 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK-KEVIHLSYTSPNSGIK 214
Query: 829 SKLSCVCWNNYIKNYLASA---DYDGVVKLWDACTGQTVSHYIE--HEKRAWSVDFSQVH 883
+LS V W+ +A+A D D + +WD T + H+K S+D+
Sbjct: 215 QQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD 274
Query: 884 PTKLASGSDDCSVKLWN 900
L S D +V LWN
Sbjct: 275 EHLLLSSGRDNTVLLWN 291
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 761 YSKFEVQGMLRT-GEFNNSANVICSISFDRDEDH-FAAAGVSKKIKIFEFNALFNDSVDV 818
YS E + + F+N ++ + ++ F+ +D+ A+ G + +I I++ N +S
Sbjct: 94 YSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC-TESPSN 152
Query: 819 YYPAV---EMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSH--YIEHE-- 871
Y P MS+ ++ + WN + + ASA +WD + V H Y
Sbjct: 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSG 212
Query: 872 -KRAWSVDFSQVHP-----TKLASGSD-DCSVKLWNI 901
K+ SV + HP A+GSD D S+ +W++
Sbjct: 213 IKQQLSV--VEWHPKNSTRVATATGSDNDPSILIWDL 247
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFE-LFGR--FDSERALAAAMSDLRDRI 546
Y SPE+ G ++IYS+G++ +E L G F+ E A++ A+ ++D +
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 194 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 250
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P RPT EI L+ ++ F EV
Sbjct: 251 LDQPDNCPERVTDLMRMCWQFNPN--MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 195 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 251
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P RPT EI L+ ++ F EV
Sbjct: 252 LDQPDNCPERVTDLMRMCWQFNPN--MRPTFLEIVNLLKDDLHPSFPEV 298
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAMSDLRDR 545
L +W A PE L GV TTSS+++S GV+ +E+ + +E+ L M
Sbjct: 194 LPVRWMA-PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG--GY 250
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI---LQSEVTNEFQEV 591
+ P E + WQ +P RPT EI L+ ++ F EV
Sbjct: 251 LDQPDNCPERVTDLMRMCWQFNPN--MRPTFLEIVNLLKDDLHPSFPEV 297
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 249
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 250 DNCPDMLLELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 292
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 247
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 248 DNCPDMLLELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 290
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVKYI 371
+FRQIV+ V Y H+QG DLKP + + +++K I
Sbjct: 113 VFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLI 150
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLRDRILPPS 550
Y SPE+ G S++YSLG + +E+ F + ++ A +R+ +PPS
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 257
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 255
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 256 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 298
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 252
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 253 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 295
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 255
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 256 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 298
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLR 543
T + + Y SPE+ G S++YSLG + +E+ F + ++ A +R
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 544 DRILPPS 550
+ +PPS
Sbjct: 234 EDPIPPS 240
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 249
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 250 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 292
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 17/110 (15%)
Query: 493 LEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRD 544
L +W SPE L GV TT S+++S GV+ +E+ + +E+ L M L D
Sbjct: 224 LPVRW-MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 282
Query: 545 RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ P + E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 283 K---PDNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 327
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 253
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 254 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 296
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLR 543
T + + Y SPE+ G S++YSLG + +E+ F + ++ A +R
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 544 DRILPPS 550
+ +PPS
Sbjct: 234 EDPIPPS 240
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 256
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 257 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 299
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLR 543
T + + Y SPE+ G S++YSLG + +E+ F + ++ A +R
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
Query: 544 DRILPPS 550
+ +PPS
Sbjct: 234 EDPIPPS 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
+R E +FRQI+ + Y H+QG+ DLKP + + +S VK
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK 156
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRIL--PPSFLSE 554
Y + E L G G ++YSLG++FFE+ F + + LR + PP F
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 555 NPK-EAGFCLWQLHPEPLSRPTTREILQS 582
K E + +P RP R +L S
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
+R E +FRQI+ + Y H+QG+ DLKP + + +S VK
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVK 156
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRIL--PPSFLSE 554
Y + E L G G ++YSLG++FFE+ F + + LR + PP F
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 555 NPK-EAGFCLWQLHPEPLSRPTTREILQS 582
K E + +P RP R +L S
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1
Length = 402
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 821 PAVEMSNRSK-LSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE--HEKRAWSV 877
P + + +K + V W+ +N L SA D V+ +WD TG V H +SV
Sbjct: 123 PVITLEGHTKRVGIVAWHPTAQNVLLSAGXDNVILVWDVGTGAAVLTLGPDVHPDTIYSV 182
Query: 878 DFSQ 881
D+S+
Sbjct: 183 DWSR 186
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 262
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 263 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 305
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 256
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 257 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 299
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFEL-------FGRFDSERALAAAM-SDLRDRILPP 549
+ SPE L GV TT S+++S GV+ +E+ + +E+ L M L D+ P
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK---P 262
Query: 550 SFLSENPKEAGFCLWQLHPEPLSRPTTREILQS---EVTNEFQEV 591
+ E WQ +P+ RP+ EI+ S E+ F+EV
Sbjct: 263 DNCPDMLFELMRMCWQYNPK--MRPSFLEIISSIKEEMEPGFREV 305
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
+L KW A PE + V T S+++S G+ +ELF S S +++ F
Sbjct: 224 RLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-KMIKEGF 281
Query: 552 LSENPKEAGFCLWQLH-----PEPLSRPTTREILQ 581
+P+ A ++ + +PL RPT ++I+Q
Sbjct: 282 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRF------DSERAL 535
Q +SV + KW ++PE ++ S++++ G+L +E+F G+ +SE L
Sbjct: 158 QYVSSVGTKFPVKW-SAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216
Query: 536 AAAMSDLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQS 582
+ R+ P S+ + + W H P RPT +++L S
Sbjct: 217 KVSQG---HRLYRPHLASDTIYQIMYSCW--HELPEKRPTFQQLLSS 258
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 498 YASPEELSGGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLRDRILPPS 550
Y SPE+ G S++YSLG + +E+ F + ++ A +R+ +PPS
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPS 240
>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4
pdb|2XU7|A Chain A, Structural Basis For Rbap48 Binding To Fog-1
pdb|2XU7|B Chain B, Structural Basis For Rbap48 Binding To Fog-1
Length = 425
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHP 884
++ ++++C+ +N Y + LA+ D V LWD + H E H+ + V +S +
Sbjct: 271 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 330
Query: 885 TKLASGSDDCSVKLWNINE 903
T LAS D + +W++++
Sbjct: 331 TILASSGTDRRLNVWDLSK 349
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
+L KW A PE + V T S+++S G+ +ELF S S +++ F
Sbjct: 226 RLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-KMIKEGF 283
Query: 552 LSENPKEAGFCLWQLH-----PEPLSRPTTREILQ 581
+P+ A ++ + +PL RPT ++I+Q
Sbjct: 284 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
+L KW A PE + V T S+++S G+ +ELF S S +++ F
Sbjct: 231 RLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-KMIKEGF 288
Query: 552 LSENPKEAGFCLWQLH-----PEPLSRPTTREILQ 581
+P+ A ++ + +PL RPT ++I+Q
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
+L KW A PE + V T S+++S G+ +ELF S S +++ F
Sbjct: 231 RLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-KMIKEGF 288
Query: 552 LSENPKEAGFCLWQLH-----PEPLSRPTTREILQ 581
+P+ A ++ + +PL RPT ++I+Q
Sbjct: 289 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL--FGRFDSER 533
T + ST + +L KW A PE L +T S+++S G+L +E+ FGR R
Sbjct: 155 TKEASSTQDTGKLPVKWTA-PEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPR 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.9 bits (76), Expect = 0.37, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD 530
WYA PE LS + + S+++S GV+ +ELF D
Sbjct: 180 WYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCD 212
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRILPPSF 551
+L KW A PE + V T S+++S G+ +ELF S S +++ F
Sbjct: 208 RLPVKWMA-PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY-KMIKEGF 265
Query: 552 LSENPKEAGFCLWQLH-----PEPLSRPTTREILQ 581
+P+ A ++ + +PL RPT ++I+Q
Sbjct: 266 RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55
pdb|3C9C|A Chain A, Structural Basis Of Histone H4 Recognition By P55
Length = 432
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHP 884
++ ++++C+ +N Y + LA+ D V LWD + H E H+ + V +S +
Sbjct: 277 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 336
Query: 885 TKLASGSDDCSVKLWNINE 903
T LAS D + +W++++
Sbjct: 337 TILASSGTDRRLHVWDLSK 355
>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide
Length = 430
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHP 884
++ ++++C+ +N Y + LA+ D V LWD + H E H+ + V +S +
Sbjct: 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334
Query: 885 TKLASGSDDCSVKLWNINE 903
T LAS D + +W++++
Sbjct: 335 TILASSGTDRRLHVWDLSK 353
>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN
ALLOSTERIC Inhibitor Scf-I2
pdb|3MKS|D Chain D, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN
ALLOSTERIC Inhibitor Scf-I2
pdb|3V7D|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Psic1 Peptide Complex
pdb|3V7D|D Chain D, Crystal Structure Of Scskp1-Sccdc4-Psic1 Peptide Complex
Length = 464
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
NY+ + D +++++D+ + + H+ W++ ++ H L SGS D +V++W+I
Sbjct: 133 NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA--HGGILVSGSTDRTVRVWDI 190
Query: 902 NE 903
+
Sbjct: 191 KK 192
>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3
pdb|2YBA|B Chain B, Crystal Structure Of Nurf55 In Complex With Histone H3
pdb|2YB8|B Chain B, Crystal Structure Of Nurf55 In Complex With Su(Z)12
Length = 422
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHP 884
++ ++++C+ +N Y + LA+ D V LWD + H E H+ + V +S +
Sbjct: 279 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 338
Query: 885 TKLASGSDDCSVKLWNINE 903
T LAS D + +W++++
Sbjct: 339 TILASSGTDRRLHVWDLSK 357
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD 530
WYA PE LS + + S+++S GV+ +ELF D
Sbjct: 183 WYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCD 215
>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH
Histone H4
Length = 414
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHP 884
++ ++++C+ +N Y + LA+ D V LWD + H E H+ + V +S +
Sbjct: 273 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNE 332
Query: 885 TKLASGSDDCSVKLWNINE 903
T LAS D + +W++++
Sbjct: 333 TILASSGTDRRLNVWDLSK 351
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD 530
WYA PE LS + + S+++S GV+ +ELF D
Sbjct: 196 WYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCD 228
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFD 530
WYA PE LS + + S+++S GV+ +ELF D
Sbjct: 184 WYA-PESLSDNIFSRQSDVWSFGVVLYELFTYCD 216
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 207 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGT- 264
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 265 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 299
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 261 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 318
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 319 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 353
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSE-RALAAAMS 540
Q ++S + KW ASPE S ++ S+++S GVL +E+F G+ E R+ + +
Sbjct: 177 QYTSSTGTKFPVKW-ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 235
Query: 541 DLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
D+ R+ P S + + W+ PE RP +L+
Sbjct: 236 DISTGFRLYKPRLASTHVYQIMNHCWKERPE--DRPAFSRLLR 276
>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH
Histone H4
pdb|3CFV|A Chain A, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH
Histone H4
Length = 414
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 826 SNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHP 884
++ ++++C+ +N Y + LA+ D V LWD + H E H+ + V +S +
Sbjct: 273 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNE 332
Query: 885 TKLASGSDDCSVKLWNINE 903
T LAS D + +W++++
Sbjct: 333 TILASSGTDRRLNVWDLSK 351
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD--R 545
+L KW A PE + V T S+++S G+L +E+F + + ++D +
Sbjct: 227 RLPVKWMA-PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 285
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579
+ P+F +N W L EP RPT ++I
Sbjct: 286 MAQPAFAPKNIYSIMQACWAL--EPTHRPTFQQI 317
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSE-RALAAAMS 540
Q ++S + KW ASPE S ++ S+++S GVL +E+F G+ E R+ + +
Sbjct: 155 QYTSSTGTKFPVKW-ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 213
Query: 541 DLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
D+ R+ P S + + W+ PE RP +L+
Sbjct: 214 DISTGFRLYKPRLASTHVYQIMNHCWKERPE--DRPAFSRLLR 254
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 263 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 320
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 321 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 355
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSE-RALAAAMS 540
Q ++S + KW ASPE S ++ S+++S GVL +E+F G+ E R+ + +
Sbjct: 157 QYTSSTGTKFPVKW-ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
Query: 541 DLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
D+ R+ P S + + W+ PE RP +L+
Sbjct: 216 DISTGFRLYKPRLASTHVYQIMNHCWKERPE--DRPAFSRLLR 256
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 211 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 268
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 269 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSE-RALAAAMS 540
Q ++S + KW ASPE S ++ S+++S GVL +E+F G+ E R+ + +
Sbjct: 158 QYTSSTGTKFPVKW-ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 216
Query: 541 DLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
D+ R+ P S + + W+ PE RP +L+
Sbjct: 217 DISTGFRLYKPRLASTHVYQIMNHCWRERPE--DRPAFSRLLR 257
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD--R 545
+L KW A PE + V T S+++S G+L +E+F + + ++D +
Sbjct: 227 RLPVKWMA-PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 285
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579
+ P+F +N W L EP RPT ++I
Sbjct: 286 MAQPAFAPKNIYSIMQACWAL--EPTHRPTFQQI 317
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSE-RALAAAMS 540
Q ++S + KW ASPE S ++ S+++S GVL +E+F G+ E R+ + +
Sbjct: 157 QYTSSTGTKFPVKW-ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 215
Query: 541 DLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
D+ R+ P S + + W+ PE RP +L+
Sbjct: 216 DISTGFRLYKPRLASTHVYQIMNHCWKERPE--DRPAFSRLLR 256
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSE-RALAAAMS 540
Q ++S + KW ASPE S ++ S+++S GVL +E+F G+ E R+ + +
Sbjct: 160 QYTSSTGTKFPVKW-ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE 218
Query: 541 DLRD--RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
D+ R+ P S + + W+ PE RP +L+
Sbjct: 219 DISTGFRLYKPRLASTHVYQIMNHCWRERPE--DRPAFSRLLR 259
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 202 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 259
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 260 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 202 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 259
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 260 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 254 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 311
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 312 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 346
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFEL------FGRFDSERALAAAMSDLRDRILPPS 550
+Y SPE+++ S+I+SLG L +EL F F S++ LA + + + R +P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFRRIPYR 239
Query: 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587
+ E + L+ + RP+ EIL++ + E
Sbjct: 240 YSDELNE---IITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD--R 545
+L KW A PE + V T S+++S G+L +E+F + + ++D +
Sbjct: 229 RLPVKWMA-PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 287
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579
+ P+F +N W L EP RPT ++I
Sbjct: 288 MAQPAFAPKNIYSIMQACWAL--EPTHRPTFQQI 319
>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex
pdb|1NEX|D Chain D, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex
Length = 464
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
NY+ + D ++++D+ + + H+ W++ ++ H L SGS D +V++W+I
Sbjct: 133 NYVITGADDKXIRVYDSINKKFLLQLSGHDGGVWALKYA--HGGILVSGSTDRTVRVWDI 190
Query: 902 NE 903
+
Sbjct: 191 KK 192
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 256 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 313
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 314 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 348
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 207 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 264
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 265 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 299
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 202 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 259
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 260 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD--R 545
+L KW A PE + V T S+++S G+L +E+F + + ++D +
Sbjct: 223 RLPVKWMA-PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 281
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579
+ P+F +N W L EP RPT ++I
Sbjct: 282 MAQPAFAPKNIYSIMQACWAL--EPTHRPTFQQI 313
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD--R 545
+L KW A PE + V T S+++S G+L +E+F + + ++D +
Sbjct: 215 RLPVKWMA-PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 273
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579
+ P+F +N W L EP RPT ++I
Sbjct: 274 MAQPAFAPKNIYSIMQACWAL--EPTHRPTFQQI 305
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 327 KRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQVK 369
+R E +FRQI+ + Y H+QG+ +LKP + + +S VK
Sbjct: 114 QRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVK 156
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 498 YASPEELSG-GVCTTSSNIYSLGVLFFELFGRFDSERALAAAMSDLRDRIL--PPSFLSE 554
Y + E L G G + YSLG++FFE F + + LR + PP F
Sbjct: 196 YVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKLRSVSIEFPPDFDDN 255
Query: 555 NPK-EAGFCLWQLHPEPLSRPTTREILQS 582
K E + +P RP R +L S
Sbjct: 256 KXKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 211 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 268
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 269 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 202 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 259
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 260 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 294
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFEL------FGRFDSERALAAAMSDLRDRILPPS 550
+Y SPE+++ S+I+SLG L +EL F F S++ LA + + + R +P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFRRIPYR 239
Query: 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587
+ E + L+ + RP+ EIL++ + E
Sbjct: 240 YSDELNE---IITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFEL------FGRFDSERALAAAMSDLRDRILPPS 550
+Y SPE+++ S+I+SLG L +EL F F S++ LA + + + R +P
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFRRIPYR 239
Query: 551 FLSENPKEAGFCLWQLHPEPLSRPTTREILQSEVTNE 587
+ E + L+ + RP+ EIL++ + E
Sbjct: 240 YSDELNE---IITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 211 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 268
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 269 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 211 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 268
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 269 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 211 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 268
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 269 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 303
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 213 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 270
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 271 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 19/101 (18%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---------RFDSE--RALAAAMS 540
+L KW A PE + V T S+++S GVL +E+F + D E R L
Sbjct: 248 RLPLKWMA-PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT- 305
Query: 541 DLRDRILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREILQ 581
R+ P + + + W H EP RPT E+++
Sbjct: 306 ----RMRAPDYTTPEMYQTMLDCW--HGEPSQRPTFSELVE 340
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL--FGRFDSER 533
T + ST + +L KW A PE L +T S+++S G+L +E+ FGR R
Sbjct: 149 TKEASSTQDTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 487 TSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFG---RFDSERALAAAMSDLR 543
T + + Y SPE+ G S++YSLG + +E+ F + + A +R
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR 233
Query: 544 DRILPPS 550
+ +PPS
Sbjct: 234 EDPIPPS 240
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 182 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 221
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 183 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELFGR----FDSERALAAAMSDLRD--R 545
+L KW A PE + V T S+++S G+L +E+F + + ++D +
Sbjct: 221 RLPVKWMA-PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQ 279
Query: 546 ILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREI 579
+ P+F +N W L EP RPT ++I
Sbjct: 280 MAQPAFAPKNIYSIMQACWAL--EPTHRPTFQQI 311
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 181 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL--FGRFDSER 533
T + ST + +L KW A PE L +T S+++S G+L +E+ FGR R
Sbjct: 336 TKEASSTQDTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 389
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 187 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 226
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 481 TAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFEL--FGRFDSER 533
T + ST + +L KW A PE L +T S+++S G+L +E+ FGR R
Sbjct: 164 TKEASSTQDTGKLPVKWTA-PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 183 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L G+ T S+++S G+L +E+F
Sbjct: 235 RLPVKWMA-PESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 186 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 225
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 189 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 228
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 201 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 240
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 188 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 227
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 186 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 225
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 186 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 225
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 214 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 253
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 190 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 229
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 183 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 222
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 201 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 240
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 497 WYASPEELSGGVCTTSSNIYSLGVLFFELFGRFDSERALAA 537
WYA PE L+ + +S+++S GV+ +ELF + ++ A
Sbjct: 184 WYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA 223
>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex:
Destruction Motif Binding And Lysine Specificity On The
Scfbeta-Trcp1 Ubiquitin Ligase
Length = 435
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 817 DVYYPAVEMSNRSKLSCVCWNNYIKNYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWS 876
D+ V + +R+ ++ V ++ Y+ SA D +K+W+ T + V H++
Sbjct: 245 DITLRRVLVGHRAAVNVV---DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR---G 298
Query: 877 VDFSQVHPTKLASGSDDCSVKLWNI 901
+ Q + SGS D +++LW+I
Sbjct: 299 IACLQYRDRLVVSGSSDNTIRLWDI 323
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDXXKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDXXKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L V T S+++S GVL +E+F
Sbjct: 266 RLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 299
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 484 QQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF--GRFDSERALAAAMSD 541
++++SV + +W + PE L ++ S+I++ GVL +E++ G+ ER + ++
Sbjct: 174 EETSSVGSKFPVRW-SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE 232
Query: 542 LRD---RILPPSFLSENPKEAGFCLWQLHPEPLSRPTTREIL 580
R+ P SE + W H + RPT + +L
Sbjct: 233 HIAQGLRLYRPHLASEKVYTIMYSCW--HEKADERPTFKILL 272
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDYYKNTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 200 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 245
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 208 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 253
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 195 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 240
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 480 NTAQQQSTSVSEQLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
N + + +L KW A PE L V T S+++S GVL +E+F
Sbjct: 197 NNIDYYKKTTNGRLPVKWMA-PEALFDRVYTHQSDVWSFGVLMWEIF 242
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 213 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 334 IFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSNQ 367
I RQI + + Y H QG+ D+KP +F L +N+
Sbjct: 173 IMRQIFSALHYLHNQGICHRDIKPENF-LFSTNK 205
>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS
CRYSTAL Structure
pdb|2PBI|D Chain D, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS
CRYSTAL Structure
Length = 354
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 842 NYLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPT--KLASGSDDCSVKLW 899
N S D +WD +GQ V + HE SV + +P+ ASGSDD + +L+
Sbjct: 211 NTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY---YPSGDAFASGSDDATCRLY 267
Query: 900 NINEN 904
++ +
Sbjct: 268 DLRAD 272
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 198 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 231
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 205 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 238
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 202 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 235
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 206 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 213 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
Length = 380
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIE-----HEKRAWSVDFSQVHPTKLASGSDDCSVKL 898
L + D LWD TGQ +S + H S+ + ++ SGS D +V+L
Sbjct: 173 LITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRL 232
Query: 899 WNI 901
W++
Sbjct: 233 WDL 235
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 213 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 496 KWYASPEELSGGVCTTSSNIYSLGVLFFEL 525
KW A PE ++ G T SN++S G+L +E+
Sbjct: 175 KWTA-PEAINFGCFTIKSNVWSFGILLYEI 203
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 213 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 246
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE L + T S+++S GVL +E+F
Sbjct: 254 RLPVKWMA-PEALFDRIYTHQSDVWSFGVLLWEIF 287
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366
E +QI+ V+Y HT+ + DLKP + LL N
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366
E +QI+ V+Y HT+ + DLKP + LL N
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366
E +QI+ V+Y HT+ + DLKP + LL N
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 492 QLEEKWYASPEELSGGVCTTSSNIYSLGVLFFELF 526
+L KW A PE + + +T S+++S GVL +E+F
Sbjct: 262 RLPLKWMA-PESIFDKIYSTKSDVWSYGVLLWEIF 295
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366
E +QI+ V+Y HT+ + DLKP + LL N
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366
E +QI+ V+Y HT+ + DLKP + LL N
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366
E +QI+ V+Y HT+ + DLKP + LL N
Sbjct: 116 EATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex
Length = 408
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 10/117 (8%)
Query: 787 FDRDEDHFAAAGVSKKIKIFEFNALFNDSVDVYYPAVEMSNRSKLSCVCWNNYIKNYLAS 846
+ D F ++ K +K+++ N L V + V + S +S K+ L +
Sbjct: 108 YPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVS-------TKHCLVA 160
Query: 847 ADYDG-VVKLWDACTGQTVSHYIE-HEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
G V+L D +G + SH ++ H + +V +S + LA+ S D VKLW++
Sbjct: 161 VGTRGPKVQLCDLKSG-SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDV 216
>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1
Length = 345
Score = 30.0 bits (66), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 13/63 (20%)
Query: 844 LASADYDGVVKL-------WDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSV 896
LASA YD VKL W C + HE WS+ F +LAS SDD +V
Sbjct: 165 LASASYDDTVKLYREEEDDWVCC-----ATLEGHESTVWSLAFDP-SGQRLASCSDDRTV 218
Query: 897 KLW 899
++W
Sbjct: 219 RIW 221
>pdb|1A4I|A Chain A, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE
pdb|1A4I|B Chain B, Human Tetrahydrofolate Dehydrogenase CYCLOHYDROLASE
Length = 301
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 160 DTSLHDFITQKPLNDEHNTILEQSANT-----ENDGLSGNMLSHGSIRTKMLSKSGFSEF 214
D+++H F+ Q PL+ E++ E+ N + DGL+ SI L++ ++
Sbjct: 91 DSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLT-------SINAGRLARGDLNDC 143
Query: 215 FVKTTLKG 222
F+ T KG
Sbjct: 144 FIPCTPKG 151
>pdb|1DIA|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly249543
pdb|1DIA|B Chain B, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly249543
pdb|1DIB|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly345899
pdb|1DIB|B Chain B, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly345899
pdb|1DIG|A Chain A, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly374571
pdb|1DIG|B Chain B, Human Methylenetetrahydrofolate Dehydrogenase
Cyclohydrolase Complexed With Nadp And Inhibitor
Ly374571
Length = 306
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 160 DTSLHDFITQKPLNDEHNTILEQSANT-----ENDGLSGNMLSHGSIRTKMLSKSGFSEF 214
D+++H F+ Q PL+ E++ E+ N + DGL+ SI L++ ++
Sbjct: 91 DSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLT-------SINAGRLARGDLNDC 143
Query: 215 FVKTTLKG 222
F+ T KG
Sbjct: 144 FIPCTPKG 151
>pdb|3ZWL|B Chain B, Structure Of Eukaryotic Translation Initiation Factor
Eif3i Complex With Eif3b C-Terminus (655-700)
pdb|3ZWL|D Chain D, Structure Of Eukaryotic Translation Initiation Factor
Eif3i Complex With Eif3b C-Terminus (655-700)
Length = 369
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 844 LASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNIN 902
L S D +W + G+ + H WS+D +GS D S+KLW+++
Sbjct: 47 LFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV-DCFTKYCVTGSADYSIKLWDVS 104
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSF 360
E ++ I V+Y H+QGV DLKPS+
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNI 152
>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|B Chain B, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|C Chain C, Crystal Structure Of The Wd Repeat-Containing Protein 61
pdb|3OW8|D Chain D, Crystal Structure Of The Wd Repeat-Containing Protein 61
Length = 321
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 843 YLASADYDGVVKLWDACTGQTVSHYIEHEKRAWSVDFSQVHPTKLASGSDDCSVKLWNI 901
YLAS DG++ ++D TG+ + H S+ FS L + SDD +K++++
Sbjct: 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDV 235
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.6 bits (65), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 330 ECLYIFRQIVALVDYHHTQGVTFLDLKPSSF 360
E ++ I V+Y H+QGV DLKPS+
Sbjct: 122 EASFVLHTIGKTVEYLHSQGVVHRDLKPSNI 152
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 312 GVNLREWLNARGHKGKRIECLYIFRQIVALVDYHHTQGVTFLDLKPSSFKLLQSN 366
G L E + + H + E YI R++V+ V + H GV DLKP + N
Sbjct: 90 GGELFERIKKKKHFSE-TEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN 143
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.130 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,594,510
Number of Sequences: 62578
Number of extensions: 1026296
Number of successful extensions: 3363
Number of sequences better than 100.0: 209
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 3042
Number of HSP's gapped (non-prelim): 399
length of query: 907
length of database: 14,973,337
effective HSP length: 108
effective length of query: 799
effective length of database: 8,214,913
effective search space: 6563715487
effective search space used: 6563715487
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)