Query         002568
Match_columns 906
No_of_seqs    335 out of 2152
Neff          6.9 
Searched_HMMs 29240
Date          Tue Mar 26 16:29:44 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002568.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1286-1289//hhsearch_pdb/002568hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3l4y_A Maltase-glucoamylase, i   1.0       1       1 1627.6  89.8  823   25-904    25-870 (875)
  2 3lpp_A Sucrase-isomaltase; gly   1.0       1       1 1624.0  87.6  824   24-902    53-898 (898)
  3 3top_A Maltase-glucoamylase, i   1.0       1       1 1619.5  81.1  826   25-904    26-904 (908)
  4 4ba0_A Alpha-glucosidase, puta   1.0       1       1 1330.4  79.5  761   44-902    35-815 (817)
  5 3nsx_A Alpha-glucosidase; stru   1.0       1       1 1282.9  55.7  604  184-809    33-665 (666)
  6 2x2h_A Alpha-1,4-glucan lyase    1.0       1       1 1233.4  64.5  791   78-902    65-1026(1027)
  7 2g3m_A Maltase, alpha-glucosid   1.0       1       1 1217.3  61.5  610  185-867    46-670 (693)
  8 2f2h_A Putative family 31 gluc   1.0       1       1 1205.8  71.3  692   46-830    21-734 (773)
  9 2xvl_A Alpha-xylosidase, putat   1.0       1       1 1204.6  68.7  715   78-867    65-985 (1020)
 10 1zy9_A Alpha-galactosidase; TM   1.0       1       1  235.4  17.2  207  254-469   122-344 (564)

No 1  
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=1.00  E-value=1  Score=1627.55  Aligned_cols=823  Identities=37%  Similarity=0.700  Sum_probs=740.7

Q ss_pred             HHHHHHHHHHHC-------CCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEEC
Q ss_conf             999999986510-------2488898809968998368870899996303788788887138999999818869999964
Q 002568           25 LLLFLYCIFVAA-------EKDSVGYGYSVRSVAVDSSLKSLTAGLGLIRSSSVYGPDIQSLNLFASFETKDRLRVRITD   97 (906)
Q Consensus        25 ~~~~~~~~~~~~-------~~~~~~~gY~v~~~~~~~~~~~~~a~L~~~~~~~~~g~di~~L~l~v~~~~~~~lrv~i~d   97 (906)
                      .|.--=||....       |--|.++||++.++... +..|++|.|++...|+.||+||+.|+|+|+++++++|||||+|
T Consensus        25 ~C~~rgCcw~~~~~~~vP~C~~p~~~gy~~~~~~~~-~~~g~~a~l~~~~~~~~~g~di~~l~l~v~~~~~~~l~~~i~d  103 (875)
T 3l4y_A           25 TCDQRGCCWNPQGAVSVPWCYYSKNHSYHVEGNLVN-TNAGFTARLKNLPSSPVFGSNVDNVLLTAEYQTSNRFHFKLTD  103 (875)
T ss_dssp             HHHHHTCEECTTSSTTCCSEECCTTSSEEEEEEEEE-CSSEEEEEEEECCCCCSSSCBCSEEEEEEEEEETTEEEEEEEE
T ss_pred             HHHHCCCCCCCCCCCCCCCEECCCCCCEEEEEEEEC-CCCCEEEEEEECCCCCCCCCCCCCEEEEEEEECCCEEEEEECC
T ss_conf             996688882168888998334789999688663542-7886899997678887776663105999999659768878658


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEECCCCCEEEECCCCC
Q ss_conf             99884336743578998777554577668999878899996111169974899999458299999915994786059999
Q 002568           98 SKKQRWEIPQEIIPRQSYCTHCWLPENRLNSPVNHQTGPGNHFLSDPTSDLVFTLHTTPFGFSVKRRSSGDILFDTSPET  177 (906)
Q Consensus        98 ~~~~r~evp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pf~~~v~r~~~~~vl~~t~~~~  177 (906)
                      ++++|||||.+++|++....                         .++.++.|.++++||+|+|+|+++|+|||||+.++
T Consensus       104 ~~~~r~~vp~~~~~~~~~~~-------------------------~~~~~~~~~~~~~pf~~~v~r~~~~~vlfdt~~~~  158 (875)
T 3l4y_A          104 QTNNRFEVPHEHVQSFSGNA-------------------------AASLTYQVEISRQPFSIKVTRRSNNRVLFDSSIGP  158 (875)
T ss_dssp             TTBCCCCCCCSSCCCCCSCC-------------------------CSSCSEEEEEEETTEEEEEEETTTCCEEEEGGGSC
T ss_pred             CCCCEEECCCCCCCCCCCCC-------------------------CCCCCEEEEEECCCEEEEEEECCCCEEEEECCCCC
T ss_conf             88880788843578898887-------------------------77873599995798379999878981878604675


Q ss_pred             CCCCCEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCCCCC-CCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCE
Q ss_conf             888621388312699984068765203421544567765699-9749976436679898878665103378754999965
Q 002568          178 SHSDTFLVFKDQYIQLSSALPIERSHLYGIGEHTKKSFKLTP-NDTLTLWNADLASANVDVNLYGSHPFYIDVRSPNGTT  256 (906)
Q Consensus       178 ~~~~~~l~f~d~~~~~s~~lp~~~~~~YGlGE~~~~~~~l~~-g~~~~l~n~D~~~~~~~~~lYgs~Pf~l~~~~~~g~~  256 (906)
                            |+|+|||+++++.||+  +++|||||+.++.+++.. +++++|||+|+++.....||||+|||||+++..+|.+
T Consensus       159 ------l~f~dq~l~~~t~lp~--~~~yGlGE~~~~~~~~~~~~~~~~~~n~D~~~~~~~~~lY~~~Pf~~~~~~~~~~~  230 (875)
T 3l4y_A          159 ------LLFADQFLQLSTRLPS--TNVYGLGEHVHQQYRHDMNWKTWPIFNRDTTPNGNGTNLYGAQTFFLCLEDASGLS  230 (875)
T ss_dssp             ------CEEETTEEEEEEECSC--SCEEEEESSCCSSSSBCCSSEEEEECCCCCCCSTTCCCCSCCEEEEEEECSTTCCE
T ss_pred             ------EEEECCEEEEEEECCC--CCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCE
T ss_conf             ------5886248999998797--64342466667554015798588878547899877777655110799986589967


Q ss_pred             EEEEEECCCCEEEEEEC-CEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHH
Q ss_conf             99999649981457619-82999997786999998289998999999998399999998755710123077898899999
Q 002568          257 HGVLLLNSNGMDVVYTG-DRISYKVTGGIIDLYFFAGPSPDSVIQQYTELIGRPAPMPYWSFGFHQCRYGYENVSDLKAV  335 (906)
Q Consensus       257 ~Gvf~~Ns~~~~v~~~~-~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~hqsr~gy~~~~~v~~v  335 (906)
                      ||||++||++|+|.+++ +.++|+++||.+|+|||.||+|++|++||++|||+|+|||+||||||||||+|.++++|+++
T Consensus       231 ~Gvf~~Ns~~~~v~~~~~~~~~~~~~gg~lD~y~~~Gptp~~Vv~~Y~~ltG~p~lpP~WalG~~qsr~~Y~s~~ev~~v  310 (875)
T 3l4y_A          231 FGVFLMNSNAMEVVLQPAPAITYRTIGGILDFYVFLGNTPEQVVQEYLELIGRPALPSYWALGFHLSRYEYGTLDNMREV  310 (875)
T ss_dssp             EEEEECCCSCEEEEEETTTEEEEEESSSCEEEEEEEESSHHHHHHHHHHHHCCCCCCCGGGGSEEECCSCCCSHHHHHHH
T ss_pred             EEEEEECCCCCEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHH
T ss_conf             99999779863897368962999977884899998089899999999998588887971012651333578999999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC----CHHHHHHHHHC
Q ss_conf             99988829997379980778899621155999999715999999999889989998289998889----82888984426
Q 002568          336 VAGYAKAGIPLEVMWTDIDYMDGYKDFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISVNE----TYGTFIRGLKA  411 (906)
Q Consensus       336 v~~~~~~~IP~D~iw~Didy~~~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~~~----~y~~y~~g~~~  411 (906)
                      +++|++++||||+||+|+|||+++++||||+++||+|  ++|+++||++|+|+++|++|+|+.++    .|+.|++|.++
T Consensus       311 v~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp--~~mv~~Lh~~G~k~v~~idP~I~~~s~~~~~y~~y~eg~~~  388 (875)
T 3l4y_A          311 VERNRAAQLPYDVQHADIDYMDERRDFTYDSVDFKGF--PEFVNELHNNGQKLVIIVDPAISNNSSSSKPYGPYDRGSDM  388 (875)
T ss_dssp             HHHHHHTTCCCCEEEECGGGSBTTBTTCCCTTTTTTH--HHHHHHHHHTTCEEEEEECSCEECCCCSSSCCHHHHHHHHH
T ss_pred             HHHHHHCCCCCCEEEECCCHHCCCCCEEECHHHCCCH--HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHC
T ss_conf             9998862999863897660105777400385458898--99999999779989999678614576666566889999879


Q ss_pred             CEEEEEC-C-CCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCCCCC
Q ss_conf             8488409-9-55156672880113578898889999999998761279753995346545666799--999999999974
Q 002568          412 DIFIKRD-G-VPYLGEVWPGKVYYPDFVNPAAETFWKGEIQLFRDILPMDGLWLDMNELSNFITSL--PTPHSTLDDPPY  487 (906)
Q Consensus       412 ~~fik~~-g-~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~--~~~~~~ld~ppy  487 (906)
                      |+|||+. | .+++|.||||.++||||+||++++||.++++.++..+|+||+|+|||||++|+.|.  .|+.+.++.|||
T Consensus       389 g~fvk~~dG~~~~~g~~WpG~~~~pDFtnP~a~~WW~~~~k~~~~~~gidg~W~DmnEp~~f~~g~~~~c~~~~l~~ppy  468 (875)
T 3l4y_A          389 KIWVNSSDGVTPLIGEVWPGQTVFPDYTNPNCAVWWTKEFELFHNQVEFDGIWIDMNEVSNFVDGSVSGCSTNNLNNPPF  468 (875)
T ss_dssp             TCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHTTSCCSEEEECSTTTCCSSSBSTTCCCCSTTTSCSC
T ss_pred             CEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             92898889983248874589755729999899999999999987406876899728985325777534576443458886


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             43478875677774434542113674432210001355899999999985-19998799845336989841001798846
Q 002568          488 KINNNGVRRPINNKTVPATALHYRNLTEYNTHNLYGLLEAKATHAALINV-NGKRPFILSRSTFVGSGKYTAHWTGDNAA  566 (906)
Q Consensus       488 ~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~~l~~~-~~~RpfilsRS~f~Gs~ry~~~W~GDn~s  566 (906)
                      .+...  ...+..+|+++++.|+.+ .|+++||+||++|++|+++++++. +++|||+||||+|+|+|||++||+|||.|
T Consensus       469 ~p~~~--d~~l~~~t~~~d~~~~~g-~h~~~HNlYg~~~~~at~e~l~~~~~~kRpfilsRS~~aGsqry~~~WsGDn~s  545 (875)
T 3l4y_A          469 TPRIL--DGYLFCKTLCMDAVQHWG-KQYDIHNLYGYSMAVATAEAAKTVFPNKRSFILTRSTFAGSGKFAAHWLGDNTA  545 (875)
T ss_dssp             CCSCG--GGCTTTTSBCTTCEETTE-EHHHHGGGHHHHHHHHHHHHHHHHSTTBCCCEEESSCCTTGGGTCEEECCSCBS
T ss_pred             CCCCC--CCCCCCCCCCCCHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCHHC
T ss_conf             54324--442126754565011377-402344474899999999999984479860899555337777656431885004


Q ss_pred             CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCH-H--HHHHHHH
Q ss_conf             758897407888523464798063036899999967799999763123523202678999775457732-7--9999999
Q 002568          567 TWNDLAYSIPSILNFGLFGIPMVGADICGFSGDTTEELCRRWIQLGAFYPFARDHSAIGTIRQELYFWD-T--VAATARK  643 (906)
Q Consensus       567 ~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~P~~R~H~~~~~~~qeP~~~~-~--~~~~~r~  643 (906)
                      +|++|+.+|+++|++||+|+||||+|||||.|++++|||+||+|+|||+||||+|++.++.+||||.|+ +  +.+++|+
T Consensus       546 ~W~~L~~sI~~~L~~~lsG~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~EPw~fg~~~~v~~~~r~  625 (875)
T 3l4y_A          546 TWDDLRWSIPGVLEFNLFGIPMVGPDICGFALDTPEELCRRWMQLGAFYPFSRNHNGQGYKDQDPASFGADSLLLNSSRH  625 (875)
T ss_dssp             SHHHHHHHHHHHHHHHHTTCCSEECEETCSBSCCCHHHHHHHHHHHTTSSSEEECCCTTSCCCSGGGGCTTCHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEECCCCHHHHHHHHH
T ss_conf             88899998999999886198842577477689997899999999740586266147999888797006985689999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEECCC
Q ss_conf             99999987799999999998639842223687898981111447525434970482023189435999749990652015
Q 002568          644 VLGLRYRLLPYFYTLMYEAHMKGTAVARPMFFSFPQDVKTYRIDTQFLIGKGVMVSPVLKSGAVSVDAYFPSGNWFDLFN  723 (906)
Q Consensus       644 ~i~lRY~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t  723 (906)
                      ++++||+|||||||++++||.+|.||||||||+||+|++++++++|||||++||||||+++|+++|+||||+|.|||+||
T Consensus       626 ~i~lRY~LlPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~dQfm~G~~LLVAPV~~~g~~~~~vYLP~g~Wyd~~t  705 (875)
T 3l4y_A          626 YLNIRYTLLPYLYTLFFRAHSRGDTVARPLLHEFYEDNSTWDVHQQFLWGPGLLITPVLDEGAEKVMAYVPDAVWYDYET  705 (875)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHTCCCSEECHHHHHTTCGGGTTCCSCEEETTTEEEECCCSTTCSEEEEEECSSCEEETTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCCEEEEECCCCCEECCCC
T ss_conf             99999998999999999999749852445315898986674478608855870894311489715999939986057899


Q ss_pred             CCEEEECCCCEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCC
Q ss_conf             85036438994999548999212994379598602676431012488617999968998089999922895700134588
Q 002568          724 YSNSVSLNSGKQITLDAPPDHINVHVREGNILALQGEALTTKAARKTPFHLLVVVSSKETSTGEVFLDDGEEVEMGKEAG  803 (906)
Q Consensus       724 ~~~~~~~~gG~~v~~~apld~iPvfvR~GsIiP~q~~~~~t~~~~~~p~~L~v~~~~~g~A~g~ly~DDG~s~~~~~~~g  803 (906)
                      ++.+.  .+|+++++++|+++||||||+|+|||++++.+++.+++.+|++|+|++++++.|+|+||+|||+|+++ .++|
T Consensus       706 g~~~~--~~g~~~~~~apld~iPvfvR~GsIiP~~~~~~~t~~~~~~~~~l~v~~~~~g~a~g~LY~DDG~s~~~-~~~g  782 (875)
T 3l4y_A          706 GSQVR--WRKQKVEMELPGDKIGLHLRGGYIFPTQQPNTTTLASRKNPLGLIIALDENKEAKGELFWDDGETKDT-VANK  782 (875)
T ss_dssp             CCBCS--CCSEEEEEECCTTCCEEEEETTEEEEEECCCSSHHHHTTSCEEEEEECCTTSCEEEEEEECCSSBTTT-TTTT
T ss_pred             CEEEE--CCCEEEEEECCCCCCEEEEECCEEEECCCCCCCHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCCCC-CCCC
T ss_conf             96996--39989999636742218965884710367554224541262379999479975999999859951030-0488


Q ss_pred             EEEEEEEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEE--CCEEEEEECCCCEEEEECCCCC
Q ss_conf             09999999995257599999664075457963299999998015567654369998--9968543037812346727983
Q 002568          804 KWSFVRFYSQMIKSNVNIRSEVLNGDFALGQKWIIDKVTFIGLEKFKRFKGYKLKT--CTGRNLIKNSPVIKASVNSNAQ  881 (906)
Q Consensus       804 ~~~~~~~~~~~~~~~~~i~~~~~~g~y~~~~~~~~~~i~i~g~~~~~~~~~~~v~~--ng~~~~~~~~~~~~~~~~~~~~  881 (906)
                      +|+.++|++..  +  ++++...+++|.......+++|+|+|+ ..    +..|.+  ||.+.....    .+.++.+.+
T Consensus       783 ~y~~~~f~~~~--~--~l~~~~~~~~y~~~~~~~~~~i~i~g~-~~----~~~v~v~~~~~~~~~~~----~~~~~~~~~  849 (875)
T 3l4y_A          783 VYLLCEFSVTQ--N--RLEVNISQSTYKDPNNLAFNEIKILGT-EE----PSNVTVKHNGVPSQTSP----TVTYDSNLK  849 (875)
T ss_dssp             CCEEEEEEECS--S--EEEEEEEEECCCCTTCCEEEEEEEESC-CC----CEEEEEEETTEEC-CCC----EEEEETTTT
T ss_pred             CEEEEEEEEEC--C--EEEEEEEECCCCCCCCCEEEEEEEEEC-CC----CCEEEEECCCCCCCCCC----CEEEECCCC
T ss_conf             58999999989--9--999998327756788735999999935-89----81899953882302445----569938867


Q ss_pred             EEEEEEECCCEEECCCEEEEEEE
Q ss_conf             69999903824308858999995
Q 002568          882 FLTVEISKLSLLIGEEFKLDLEL  904 (906)
Q Consensus       882 ~~~l~i~~~~l~~~~~~~i~~~~  904 (906)
                        +|+|++++|.++++|+|.|..
T Consensus       850 --~l~i~~~~~~~~~~~~~~~~~  870 (875)
T 3l4y_A          850 --VAIITDIDLLLGEAYTVEWAH  870 (875)
T ss_dssp             --EEEEESCCEETTCCEEEEEEC
T ss_pred             --EEEEECCCCCCCCCEEECHHH
T ss_conf             --899908861058861650011


No 2  
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=1.00  E-value=1  Score=1623.95  Aligned_cols=824  Identities=37%  Similarity=0.688  Sum_probs=740.2

Q ss_pred             HHHHHHHHHHHHC-------CCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEE
Q ss_conf             9999999986510-------248889880996899836887089999630378878888713899999981886999996
Q 002568           24 LLLLFLYCIFVAA-------EKDSVGYGYSVRSVAVDSSLKSLTAGLGLIRSSSVYGPDIQSLNLFASFETKDRLRVRIT   96 (906)
Q Consensus        24 ~~~~~~~~~~~~~-------~~~~~~~gY~v~~~~~~~~~~~~~a~L~~~~~~~~~g~di~~L~l~v~~~~~~~lrv~i~   96 (906)
                      -.|..-=||....       |--|.++||++.+++.  +..|++|.|+++..|+.||+||+.|+|+|+++++++|||||+
T Consensus        53 ~~C~~rgCcw~~~~~~~vP~Cf~p~~~gy~~~~~~~--~~~g~~~~l~~~~~~~~~g~di~~l~l~v~~~~~~~l~v~i~  130 (898)
T 3lpp_A           53 GICAQRGCCWRPWNDSLIPWCFFVDNHGYNVQDMTT--TSIGVEAKLNRIPSPTLFGNDINSVLFTTQNQTPNRFRFKIT  130 (898)
T ss_dssp             HHHHHHTCEECCCSSSSSCSEECTTSSCEEEEEEEE--CSSSEEEEEEECCCCCSSSCBCSEEEEEEEEEETTEEEEEEE
T ss_pred             HHHHHCCCCCCCCCCCCCCCEECCCCCCEEEEEEEC--CCCCEEEEEEECCCCCCCCCCCHHEEEEEEEECCCEEEEEEC
T ss_conf             899668887426888899733676788858866751--688679999877888778776301499999964987999865


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEECCCCCEEEECCCC
Q ss_conf             49988433674357899877755457766899987889999611116997489999945829999991599478605999
Q 002568           97 DSKKQRWEIPQEIIPRQSYCTHCWLPENRLNSPVNHQTGPGNHFLSDPTSDLVFTLHTTPFGFSVKRRSSGDILFDTSPE  176 (906)
Q Consensus        97 d~~~~r~evp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pf~~~v~r~~~~~vl~~t~~~  176 (906)
                      |+.++|||||..++++....                         ..++.++.|.++++||+|+|+|+++|++||||+.+
T Consensus       131 d~~~~r~~vp~~~~~~~~~~-------------------------~~~~~~~~~~~~~~pf~~~v~r~~~g~vlf~t~~~  185 (898)
T 3lpp_A          131 DPNNRRYEVPHQYVKEFTGP-------------------------TVSDTLYDVKVAQNPFSIQVIRKSNGKTLFDTSIG  185 (898)
T ss_dssp             CTTSCCCCCCCSSSCCCCCC-------------------------CCSSCSEEEEEEETTEEEEEEETTTTEEEEEGGGS
T ss_pred             CCCCCCEECCHHCCCCCCCC-------------------------CCCCCCEEEEEECCCEEEEEEECCCCCEEEECCCC
T ss_conf             88887078871026889888-------------------------76786079999679818999988899487833677


Q ss_pred             CCCCCCEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCCCCC-CCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf             9888621388312699984068765203421544567765699-974997643667989887866510337875499996
Q 002568          177 TSHSDTFLVFKDQYIQLSSALPIERSHLYGIGEHTKKSFKLTP-NDTLTLWNADLASANVDVNLYGSHPFYIDVRSPNGT  255 (906)
Q Consensus       177 ~~~~~~~l~f~d~~~~~s~~lp~~~~~~YGlGE~~~~~~~l~~-g~~~~l~n~D~~~~~~~~~lYgs~Pf~l~~~~~~g~  255 (906)
                      +      |+|+|||+|+++.+|.  +++||||||.+++|++++ |++++|||+|++......||||+|||||+++..+|.
T Consensus       186 ~------l~f~dq~~~~~~~lp~--~~~YGlGE~~~~~~~l~~~~~~~~l~n~D~~~~~~~~~lY~~iPf~~~~~~~~~~  257 (898)
T 3lpp_A          186 P------LVYSDQYLQISARLPS--DYIYGIGEQVHKRFRHDLSWKTWPIFTRDQLPGDNNNNLYGHQTFFMCIEDTSGK  257 (898)
T ss_dssp             C------CEEETTEEEEEEECSS--SCEEEEESSCCSSSSCCCSSEEEEESCCCCCCCSSCCCCSCCEEEEEEECSTTCC
T ss_pred             C------EEEEEEEEEEEEECCC--CCEECCCCCCCCCCEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCC
T ss_conf             5------5885018999743687--6377045667876422479978988866888887777755640279998648995


Q ss_pred             EEEEEEECCCCEEEEEEC-CEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHH
Q ss_conf             599999649981457619-8299999778699999828999899999999839999999875571012307789889999
Q 002568          256 THGVLLLNSNGMDVVYTG-DRISYKVTGGIIDLYFFAGPSPDSVIQQYTELIGRPAPMPYWSFGFHQCRYGYENVSDLKA  334 (906)
Q Consensus       256 ~~Gvf~~Ns~~~~v~~~~-~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~hqsr~gy~~~~~v~~  334 (906)
                      +||||++|+++++|.+++ +.++|+++||.+|+|||.||+|++|++||++|||+|+|||+||||||||||+|.++++|++
T Consensus       258 ~~Gvf~~Ns~~~~v~~~~~~~~~~~~~gg~lD~y~~~Gptp~~Vi~~Y~~LtG~p~lpP~WalG~~qsr~~Y~s~~ev~~  337 (898)
T 3lpp_A          258 SFGVFLMNSNAMEIFIQPTPIVTYRVTGGILDFYILLGDTPEQVVQQYQQLVGLPAMPAYWNLGFQLSRWNYKSLDVVKE  337 (898)
T ss_dssp             EEEEEECCCSCEEEEEETTTEEEEEESSSCEEEEEEEESSHHHHHHHHHHHHCCCCCCCGGGGSCEECCSCCCSHHHHHH
T ss_pred             EEEEEEECCCCCEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHCCCCEECCCCCCHHHHHH
T ss_conf             79999967997268714898089998788578999918889999999999858887686100273143144799999999


Q ss_pred             HHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC-----CHHHHHHHH
Q ss_conf             999988829997379980778899621155999999715999999999889989998289998889-----828889844
Q 002568          335 VVAGYAKAGIPLEVMWTDIDYMDGYKDFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISVNE-----TYGTFIRGL  409 (906)
Q Consensus       335 vv~~~~~~~IP~D~iw~Didy~~~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~~~-----~y~~y~~g~  409 (906)
                      ++++|++++||||+||+|+|||+++++||||+++||+|  ++|+++||++|+|+++|++|+|+.++     .|..|++|.
T Consensus       338 vv~~~r~~~IP~Dvi~lDidy~~~~~dFt~D~~~FPdp--~~mv~~Lh~~G~k~vl~idP~I~~~~~~~~~~Y~~y~eg~  415 (898)
T 3lpp_A          338 VVRRNREAGIPFDTQVTDIDYMEDKKDFTYDQVAFNGL--PQFVQDLHDHGQKYVIILDPAISIGRRANGTTYATYERGN  415 (898)
T ss_dssp             HHHHHHHTTCCCCEEEECGGGSSTTCTTCCCTTTTTTH--HHHHHHHHHTTCEEEEEECSCEECSCCTTSCCCHHHHHHH
T ss_pred             HHHHHHHCCCCCEEEEECCCCCCCCCCCEECHHHCCCH--HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHHH
T ss_conf             99999871998001476453004778501784358798--9999999977998999967863367744444508899998


Q ss_pred             HCCEEEEEC-C-CCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCCC
Q ss_conf             268488409-9-55156672880113578898889999999998761279753995346545666799--9999999999
Q 002568          410 KADIFIKRD-G-VPYLGEVWPGKVYYPDFVNPAAETFWKGEIQLFRDILPMDGLWLDMNELSNFITSL--PTPHSTLDDP  485 (906)
Q Consensus       410 ~~~~fik~~-g-~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~--~~~~~~ld~p  485 (906)
                      ++|+|||+. | .+++|.||||.++||||+||++++||.+++++++..+|+||+|+|||||++|+.|+  .|+.+.++.|
T Consensus       416 ~~g~fvk~~~G~~~~~g~~WpG~~~~~Dftnp~a~~ww~~~~~~~~~~~giDg~W~DmnEp~~F~~g~~~~~~~~~l~~p  495 (898)
T 3lpp_A          416 TQHVWINESDGSTPIIGEVWPGLTVYPDFTNPNCIDWWANECSIFHQEVQYDGLWIDMNEVSSFIQGSTKGCNVNKLNYP  495 (898)
T ss_dssp             HHTCBCBCTTSSSBCCEEETTEEEECBCTTSHHHHHHHHHHHHHHHHHSCCSEEEECSTTTCCSSSBCTTCCCCSTTTSC
T ss_pred             HCCCEEECCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             68957988999950477725997036089998999999999999885079538999089743356875345765444688


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             7443478875677774434542113674432210001355899999999985-199987998453369898410017988
Q 002568          486 PYKINNNGVRRPINNKTVPATALHYRNLTEYNTHNLYGLLEAKATHAALINV-NGKRPFILSRSTFVGSGKYTAHWTGDN  564 (906)
Q Consensus       486 py~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~~l~~~-~~~RpfilsRS~f~Gs~ry~~~W~GDn  564 (906)
                      ||.+...+  ..+..+|+|+++.|+++ .|+++||+||+++++|+++++++. +++|||+||||+|+|+|||+++|+|||
T Consensus       496 ~y~p~~~~--~~l~~~t~~~d~~~~~g-~~~~~HNlYg~~~~~at~e~l~~~~~~~RpfilsRS~~aGsqRy~~~WsGDn  572 (898)
T 3lpp_A          496 PFTPDILD--KLMYSKTICMDAVQNWG-KQYDVHSLYGYSMAIATEQAVQKVFPNKRSFILTRSTFAGSGRHAAHWLGDN  572 (898)
T ss_dssp             SSCCSCGG--GCTTTTSBCTTCEETTE-EHHHHGGGHHHHHHHHHHHHHHHHSTTBCCCEEESCCCTTGGGTCEEECCSC
T ss_pred             CCCCCCCC--CCCCCCCCCCCCCCCCC-CCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf             86544122--32234633455311588-5000023005889999999999743688861797133377776530168865


Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCH-H--HHHHH
Q ss_conf             46758897407888523464798063036899999967799999763123523202678999775457732-7--99999
Q 002568          565 AATWNDLAYSIPSILNFGLFGIPMVGADICGFSGDTTEELCRRWIQLGAFYPFARDHSAIGTIRQELYFWD-T--VAATA  641 (906)
Q Consensus       565 ~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~P~~R~H~~~~~~~qeP~~~~-~--~~~~~  641 (906)
                      .|+|++|+.+|+++|++||+|+||||+|||||.|++++|||+||+|+|||+||||+|+..++.+||||.|+ +  +.+++
T Consensus       573 ~s~W~~L~~sI~~~L~~~lsG~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~EPw~f~~~~~~~~~~  652 (898)
T 3lpp_A          573 TASWEQMEWSITGMLEFSLFGIPLVGADICGFVAETTEELCRRWMQLGAFYPFSRNHNSDGYEHQDPAFFGQNSLLVKSS  652 (898)
T ss_dssp             BSSHHHHHHHHHHHHHHHHTTCCSEECEETCSBSCCCHHHHHHHHHHHTTSSSCEECCCTTSCCCSGGGGCTTCHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCEECCCCHHHHHHH
T ss_conf             57899999989999987640997246877677899988999999887527860501169999898984669857899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEEC
Q ss_conf             99999999877999999999986398422236878989811114475254349704820231894359997499906520
Q 002568          642 RKVLGLRYRLLPYFYTLMYEAHMKGTAVARPMFFSFPQDVKTYRIDTQFLIGKGVMVSPVLKSGAVSVDAYFPSGNWFDL  721 (906)
Q Consensus       642 r~~i~lRY~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~  721 (906)
                      |+++++||+||||+||++++||.+|.||||||||+||+|++++++++|||||++||||||+++|+++|+||||+|.|||+
T Consensus       653 r~~i~lRY~LlPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~dQfm~G~~LLVAPV~~~g~~~~~VYLP~g~Wyd~  732 (898)
T 3lpp_A          653 RQYLTIRYTLLPFLYTLFYKAHVFGETVARPVLHEFYEDTNSWIEDTEFLWGPALLITPVLKQGADTVSAYIPDAIWYDY  732 (898)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHCCCSEECTHHHHTTSGGGGGCCSSEEETTTEEEECCCSTTCSEEEEEECSSCEEET
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCHHHHCCCCEEEECCCCEEEEECCCCCCEEEEECCCCEEEEC
T ss_conf             99999999999999999999997298533310038999867754787289658718933214897079999999848978


Q ss_pred             CCCCEEEECCCCEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCC
Q ss_conf             15850364389949995489992129943795986026764310124886179999689980899999228957001345
Q 002568          722 FNYSNSVSLNSGKQITLDAPPDHINVHVREGNILALQGEALTTKAARKTPFHLLVVVSSKETSTGEVFLDDGEEVEMGKE  801 (906)
Q Consensus       722 ~t~~~~~~~~gG~~v~~~apld~iPvfvR~GsIiP~q~~~~~t~~~~~~p~~L~v~~~~~g~A~g~ly~DDG~s~~~~~~  801 (906)
                      ||++.+.  .||+++++++|+++||||||+|+|||++++.+++.+++.+|++|+|+++++|.|+|+||+|||+|+++ .+
T Consensus       733 ~tg~~~~--~gg~~i~~~apld~iPvfvR~GsIiP~~~~~~~t~~~~~~~~~L~v~~~~~g~a~g~lY~DDG~s~~~-y~  809 (898)
T 3lpp_A          733 ESGAKRP--WRKQRVDMYLPADKIGLHLRGGYIIPIQEPDVTTTASRKNPLGLIVALGENNTAKGDFFWDDGETKDT-IQ  809 (898)
T ss_dssp             TTCCBCS--CCSEEEEEECCTTCCEEEEETTEEEEEECCCSSHHHHTTSCEEEEEECCTTSEEEEEEEECCSSBTTH-HH
T ss_pred             CCCCEEE--ECCEEEEEECCCCCCEEEEECCCEEEECCCCCCHHHHHCCCEEEEEEECCCCEEEEEEEEECCCCHHH-HC
T ss_conf             8995995--09989999778632439975881744047444245652162689998379974999999979970201-04


Q ss_pred             CCEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCEEEEEECCCCEEEEECCCCC
Q ss_conf             88099999999952575999996640754579632999999980155676543699989968543037812346727983
Q 002568          802 AGKWSFVRFYSQMIKSNVNIRSEVLNGDFALGQKWIIDKVTFIGLEKFKRFKGYKLKTCTGRNLIKNSPVIKASVNSNAQ  881 (906)
Q Consensus       802 ~g~~~~~~~~~~~~~~~~~i~~~~~~g~y~~~~~~~~~~i~i~g~~~~~~~~~~~v~~ng~~~~~~~~~~~~~~~~~~~~  881 (906)
                      +|+|+.++|++..  +.++  +....++|.......+++|+|+|+...|  +.+.|..||++.....    .+.++.+.+
T Consensus       810 ~g~y~~~~f~~~~--~~l~--~~~~~~~~~~~~~~~~~~i~i~g~~~~p--~~v~v~~ng~~~~~~~----~~~y~~~~~  879 (898)
T 3lpp_A          810 NGNYILYTFSVSN--NTLD--IVCTHSSYQEGTTLAFQTVKILGLTDSV--TEVRVAENNQPMNAHS----NFTYDASNQ  879 (898)
T ss_dssp             HTCSEEEEEEEET--TEEE--EEEEEECCGGGGGCEEEEEEEESCCSCC--SCEEEEETTCCCEEEC----CEEEETTTT
T ss_pred             CCCEEEEEEEEEC--CEEE--EEEEECCCCCCCCCEEEEEEEECCCCCC--EEEEEEECCCCCCCCC----EEEECCCCC
T ss_conf             8857999999989--9999--9995467666777558899999068997--4899976991722221----069807857


Q ss_pred             EEEEEEECCCEEECCCEEEEE
Q ss_conf             699999038243088589999
Q 002568          882 FLTVEISKLSLLIGEEFKLDL  902 (906)
Q Consensus       882 ~~~l~i~~~~l~~~~~~~i~~  902 (906)
                        +|+|+++++.++++|+|+|
T Consensus       880 --~l~i~~~~~~~~~~~~i~w  898 (898)
T 3lpp_A          880 --VLLIADLKLNLGRNFSVQW  898 (898)
T ss_dssp             --EEEECSCCEETTSCEEEEC
T ss_pred             --EEEECCCCCCCCCCEEEEC
T ss_conf             --8998388744789859859


No 3  
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=1.00  E-value=1  Score=1619.50  Aligned_cols=826  Identities=36%  Similarity=0.670  Sum_probs=737.2

Q ss_pred             HHHHHHHHHHHC--CCCCCC----CCEEEEEEEEECCCCCEEEEEEEECC---CCCCCCCCCEEEEEEEEEECCEEEEEE
Q ss_conf             999999986510--248889----88099689983688708999963037---887888871389999998188699999
Q 002568           25 LLLFLYCIFVAA--EKDSVG----YGYSVRSVAVDSSLKSLTAGLGLIRS---SSVYGPDIQSLNLFASFETKDRLRVRI   95 (906)
Q Consensus        25 ~~~~~~~~~~~~--~~~~~~----~gY~v~~~~~~~~~~~~~a~L~~~~~---~~~~g~di~~L~l~v~~~~~~~lrv~i   95 (906)
                      .|.--=||....  .-.|.|    .||++++++.  +..|++|.|++++.   |+.||+||+.|+|+|+++++++|||||
T Consensus        26 ~C~~rGCcw~~~~~~~~P~Cffp~~gY~~~~~~~--~~~g~~~~l~~~~~~~~~~~~~~di~~l~l~v~~~~~~~l~v~i  103 (908)
T 3top_A           26 NCTARGCIWEASNSSGVPFCYFVNDLYSVSDVQY--NSHGATADISLKSSVYANAFPSTPVNPLRLDVTYHKNEMLQFKI  103 (908)
T ss_dssp             HHHTTTEEECCCSSTTCCSEEESSCSEEECCCEE--CSSEEEEEEEESCHHHHTTSSSCBCSSEEEEEEECSSSEEEEEE
T ss_pred             HHHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEE--CCCCEEEEEECCCCCCCCCCCCCCCHHEEEEEEEECCCEEEEEE
T ss_conf             8966888711688999960052699737766653--47756998111666554557898730069999996698799998


Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEECCCCCEEEECCC
Q ss_conf             64998843367435789987775545776689998788999961111699748999994582999999159947860599
Q 002568           96 TDSKKQRWEIPQEIIPRQSYCTHCWLPENRLNSPVNHQTGPGNHFLSDPTSDLVFTLHTTPFGFSVKRRSSGDILFDTSP  175 (906)
Q Consensus        96 ~d~~~~r~evp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pf~~~v~r~~~~~vl~~t~~  175 (906)
                      +|+.++|||||.++ +.|....                       .+.++++|.|.++++||+|+|+|+++|++||||+.
T Consensus       104 ~d~~~~r~evp~~~-~~~~~~~-----------------------~~~~~~~~~~~~~~~pF~~~v~R~s~g~vlfdt~~  159 (908)
T 3top_A          104 YDPNKNRYEVPVPL-NIPSMPS-----------------------STPEGQLYDVLIKKNPFGIEIRRKSTGTIIWDSQL  159 (908)
T ss_dssp             ECSSSCCCCCCCCC-CCCSSCC-----------------------CCTTTCCEEEEEETTTTEEEEEETTSCCEEEECCS
T ss_pred             ECCCCCEEECCCCC-CCCCCCC-----------------------CCCCCCCEEEEEECCCCEEEEEECCCCCEEEECCC
T ss_conf             66888758888656-7788887-----------------------76678656999967884899998889838886688


Q ss_pred             CCCCCCCEEEEECCEEEEEEECCCCCCCEEECCCCCCCCCCCCC-CCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             99888621388312699984068765203421544567765699-97499764366798988786651033787549999
Q 002568          176 ETSHSDTFLVFKDQYIQLSSALPIERSHLYGIGEHTKKSFKLTP-NDTLTLWNADLASANVDVNLYGSHPFYIDVRSPNG  254 (906)
Q Consensus       176 ~~~~~~~~l~f~d~~~~~s~~lp~~~~~~YGlGE~~~~~~~l~~-g~~~~l~n~D~~~~~~~~~lYgs~Pf~l~~~~~~g  254 (906)
                      ++      |+|+|||+++++.||+  +++|||||+.+..+++.. +.+++|||+|++. ..+.||||+|||||+++.. |
T Consensus       160 ~~------l~f~dq~l~~st~lp~--~~~YGlGE~~~~~~r~~~~~~~~~~~~~D~~~-~~~~nlYgs~Pfyl~~~~~-~  229 (908)
T 3top_A          160 LG------FTFSDMFIRISTRLPS--KYLYGFGETEHRSYRRDLEWHTWGMFSRDQPP-GYKKNSYGVHPYYMGLEED-G  229 (908)
T ss_dssp             SC------CEEETTEEEEEEECSS--SCEECCSSSCCSSSBCCCSSEEEEESCCCCCS-CTTCCCSCCCCEEEEECSS-S
T ss_pred             CC------EEECCCEEEEEEECCC--CCEECCCCCCCCCCCCCCCCCEEEEEECCCCC-CCCCCCCCEEEEEEEECCC-C
T ss_conf             88------0783767999997684--33450467677432244677245203037898-7777764323269998479-8


Q ss_pred             CEEEEEEECCCCEEEEEEC-CEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHH
Q ss_conf             6599999649981457619-829999977869999982899989999999983999999987557101230778988999
Q 002568          255 TTHGVLLLNSNGMDVVYTG-DRISYKVTGGIIDLYFFAGPSPDSVIQQYTELIGRPAPMPYWSFGFHQCRYGYENVSDLK  333 (906)
Q Consensus       255 ~~~Gvf~~Ns~~~~v~~~~-~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~hqsr~gy~~~~~v~  333 (906)
                      .+||||++||++|||.+++ +.++|+++||.||+|||+||+|++|++||++|||+|+|||+||||||||||+|.++++|+
T Consensus       230 ~~~Gvf~~Ns~~~dv~~~~~~~~~~~~~gG~lD~y~~~Gptp~~Vi~qYt~LtG~p~mpP~WalGy~qsR~~Y~~~~ev~  309 (908)
T 3top_A          230 SAHGVLLLNSNAMDVTFQPLPALTYRTTGGVLDFYVFLGPTPELVTQQYTELIGRPVMVPYWSLGFQLCRYGYQNDSEIA  309 (908)
T ss_dssp             CEEEEEECCCSSEEEEEETTTEEEEEESSSCEEEEEECCSSHHHHHHHHHHHHCCCCCCCGGGGSCEECCTTCCSHHHHH
T ss_pred             EEEEEEEECCCCCEEEECCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCHHHHH
T ss_conf             08999997699876773489829999868958899966999999999999976899889723222030255689999999


Q ss_pred             HHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC--CHHHHHHHHHC
Q ss_conf             9999988829997379980778899621155999999715999999999889989998289998889--82888984426
Q 002568          334 AVVAGYAKAGIPLEVMWTDIDYMDGYKDFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISVNE--TYGTFIRGLKA  411 (906)
Q Consensus       334 ~vv~~~~~~~IP~D~iw~Didy~~~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~~~--~y~~y~~g~~~  411 (906)
                      +|+++||+++||||+||+|||||+++++||||+ +||+|  ++|+++||++|+|+|+||||+|+.++  .|+.|++|.++
T Consensus       310 ~vv~~~r~~~IPlDvi~~Didym~~~~~FT~d~-~FPdp--~~mv~~Lh~~G~k~v~iidP~I~~~~~~~Y~~y~eg~~~  386 (908)
T 3top_A          310 SLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSP-KFAGF--PALINRMKADGMRVILILDPAISGNETQPYPAFTRGVED  386 (908)
T ss_dssp             HHHHHHHHHTCCCCEEEECGGGSSTTCTTCCCG-GGTTH--HHHHHHHHHHTCEEEEEECSCEECCCCSCCHHHHHHHHH
T ss_pred             HHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCC-CCCCH--HHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHC
T ss_conf             999988873998215886052005644064587-88998--999999997798799996776257877788889988768


Q ss_pred             CEEEEEC--CCCEEEEECCC---------------------EECCCCCCCHHHHHHHHHHHHHHHC-------CCCCCEE
Q ss_conf             8488409--95515667288---------------------0113578898889999999998761-------2797539
Q 002568          412 DIFIKRD--GVPYLGEVWPG---------------------KVYYPDFVNPAAETFWKGEIQLFRD-------ILPMDGL  461 (906)
Q Consensus       412 ~~fik~~--g~~~~g~~WpG---------------------~~~~pDf~np~a~~ww~~~~~~~~~-------~~g~dg~  461 (906)
                      |+|||++  |+++.|.||||                     .++||||+||+|++||.++++++++       .+|+||+
T Consensus       387 g~fvk~~~gg~~~~g~vWpG~~~v~~d~~~~~~~~~~~~~~~~~fpDftnp~ar~WW~~~~~~~~~~~~~~~~~~gvdg~  466 (908)
T 3top_A          387 DVFIKYPNDGDIVWGKVWPDFPDVVVNGSLDWDSQVELYRAYVAFPDFFRNSTAKWWKREIEELYNNPQNPERSLKFDGM  466 (908)
T ss_dssp             TCBCBCSSSCCBCEEEEEEECSSCCCCTTSCHHHHHHHTEEEEECBCTTSHHHHHHHHHHHHHHHSCSSCGGGCCCCSEE
T ss_pred             CCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
T ss_conf             96897389895126752689755453332222222223557624646899899999999999987522343446786589


Q ss_pred             EEECCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--C--CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             953465456667999---99999999974434788756777744345421136--7--4432210001355899999999
Q 002568          462 WLDMNELSNFITSLP---TPHSTLDDPPYKINNNGVRRPINNKTVPATALHYR--N--LTEYNTHNLYGLLEAKATHAAL  534 (906)
Q Consensus       462 W~DmnEps~f~~~~~---~~~~~ld~ppy~~~~~g~~~~l~~~t~~~~~~h~~--~--~~~~~~HNlYg~~~~~at~~~l  534 (906)
                      |+|||||++|+.+.+   |+.+.++.|||.+........|..+|+|+++.|+.  |  ..||++||+||+++++|+++++
T Consensus       467 W~DmnEPs~F~~g~~~~~~~~~~l~~ppy~p~~~~~~~~l~~~t~~~~~~~~~~dG~~~~h~~vHNlYg~~~~~atye~l  546 (908)
T 3top_A          467 WIDMNEPSSFVNGAVSPGCRDASLNHPPYMPHLESRDRGLSSKTLCMESQQILPDGSLVQHYNVHNLYGWSQTRPTYEAV  546 (908)
T ss_dssp             EECSTTTCCSSSSSSSSCCCCTTTSSCSSCCSCTTGGGTTTTTSCCTTCEEECSSSCEEEHHHHGGGHHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             98068865455653234676433458864333334566643364345541541588742033333125899999999999


Q ss_pred             HHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf             98519998799845336989841001798846758897407888523464798063036899999967799999763123
Q 002568          535 INVNGKRPFILSRSTFVGSGKYTAHWTGDNAATWNDLAYSIPSILNFGLFGIPMVGADICGFSGDTTEELCRRWIQLGAF  614 (906)
Q Consensus       535 ~~~~~~RpfilsRS~f~Gs~ry~~~W~GDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF  614 (906)
                      ++.+++|||+||||+|+|+|||++||+|||.|+|++|+.+|+++|++||+|+||||+|||||.|++++|||+||+|+|||
T Consensus       547 ~~~~~~RpfilsRS~~aGsqry~~~WtGDn~s~W~~L~~si~~~L~~~lsG~p~~g~DIgGF~g~~~~EL~~RW~Q~gaF  626 (908)
T 3top_A          547 QEVTGQRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSIIGMMEFSLFGISYTGADICGFFQDAEYEMCVRWMQLGAF  626 (908)
T ss_dssp             HHHHSSCCCEEESSCCTTGGGTCEEECCCCBSSTHHHHHHHHHHHHHHHHTCCSEECBTTCSBSCCCHHHHHHHHHHHTT
T ss_pred             HHCCCCCCEEEEECCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
T ss_conf             96128985289842226777756605975242089999999999988620986235763764899988999999887227


Q ss_pred             CCEECCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEC
Q ss_conf             523202678999775457732-7999999999999987799999999998639842223687898981111447525434
Q 002568          615 YPFARDHSAIGTIRQELYFWD-TVAATARKVLGLRYRLLPYFYTLMYEAHMKGTAVARPMFFSFPQDVKTYRIDTQFLIG  693 (906)
Q Consensus       615 ~P~~R~H~~~~~~~qeP~~~~-~~~~~~r~~i~lRY~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~i~~Qfm~G  693 (906)
                      +||||+|+..++.+||||.|+ ++.+++|+++++||+||||+||++++||++|.|||||||++||+|++++++++|||+|
T Consensus       627 ~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy~LlPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~~Qfm~G  706 (908)
T 3top_A          627 YPFSRNHNTIGTRRQDPVSWDVAFVNISRTVLQTRYTLLPYLYTLMHKAHTEGVTVVRPLLHEFVSDQVTWDIDSQFLLG  706 (908)
T ss_dssp             SSSCEECCCSSSCCCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSEECGGGTCTTCTTTTTCCSSEEET
T ss_pred             CCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEC
T ss_conf             70036147999877687247989999999999999999999999999999639873045204688986785478637855


Q ss_pred             CCEEEEEEECCCCEEEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEE
Q ss_conf             97048202318943599974999065201585036438994999548999212994379598602676431012488617
Q 002568          694 KGVMVSPVLKSGAVSVDAYFPSGNWFDLFNYSNSVSLNSGKQITLDAPPDHINVHVREGNILALQGEALTTKAARKTPFH  773 (906)
Q Consensus       694 ~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~~~gG~~v~~~apld~iPvfvR~GsIiP~q~~~~~t~~~~~~p~~  773 (906)
                      ++||||||+++|+++|+||||+|.|||+||++.+.  .+|+++++++|+++||||||+|+|||++++++++.+++.++++
T Consensus       707 ~~lLVaPV~~~g~~~~~vYLP~g~Wyd~~tg~~~~--g~g~~~~~~apl~~iPvfvR~GsIiP~~~~~~~t~~~~~~~~~  784 (908)
T 3top_A          707 PAFLVSPVLERNARNVTAYFPRARWYDYYTGVDIN--ARGEWKTLPAPLDHINLHVRGGYILPWQEPALNTHLSRQKFMG  784 (908)
T ss_dssp             TTEEEECCCSSSCCEEEEEECSSCEEETTTCCBCC--CSSEEEEEECCTTCCEEEEETEEEEEEECCCSSHHHHTTSCEE
T ss_pred             CCEEEEEECCCCCEEEEEECCCCEEEECCCCCEEE--CCCEEEEEECCCCCEEEEEECCEEEEECCCCCCHHHHCCCCEE
T ss_conf             87189531248960799986997347669985896--5997999955864136999898682004744431331589779


Q ss_pred             EEEEECCCCEEEEEEEEECCCCCC-CCCCCCEEEEEEEEEEEECCEEEEEEEEEECCC-CCCCCEEEEEEEEEECCCCCC
Q ss_conf             999968998089999922895700-134588099999999952575999996640754-579632999999980155676
Q 002568          774 LLVVVSSKETSTGEVFLDDGEEVE-MGKEAGKWSFVRFYSQMIKSNVNIRSEVLNGDF-ALGQKWIIDKVTFIGLEKFKR  851 (906)
Q Consensus       774 L~v~~~~~g~A~g~ly~DDG~s~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~g~y-~~~~~~~~~~i~i~g~~~~~~  851 (906)
                      |+|+++++|.|+|+||+|||+|++ |  ++|+|+.++|++..  +  ++++....++| .......+++|+|+|+.+.| 
T Consensus       785 l~v~~~~~g~a~g~lY~DDG~s~~~y--~~g~y~~~~f~~~~--~--~l~~~~~~~~y~~~~~~~~~~~i~i~G~~~~~-  857 (908)
T 3top_A          785 FKIALDDEGTAGGWLFWDDGQSIDTY--GKGLYYLASFSASQ--N--TMQSHIIFNNYITGTNPLKLGYIEIWGVGSVP-  857 (908)
T ss_dssp             EEEECBTTBCEEEEEEECCSSSTTTG--GGSCCEEEEEEECS--S--CEEEEEEEESSCCSSSCCBEEEEEEECCCSSC-
T ss_pred             EEEEECCCCEEEEEEEEECCCCHHHH--CCCCEEEEEEEEEC--C--EEEEEECCCCCCCCCCCCEEEEEEEEEECCCC-
T ss_conf             99994899869999999799863142--28877999999989--9--99999730771357888468899999724898-


Q ss_pred             CCCEEEEECCEEEEEECCCCEEEEECCCCCEEEEEEECCCEEECCCEEEEEEE
Q ss_conf             54369998996854303781234672798369999903824308858999995
Q 002568          852 FKGYKLKTCTGRNLIKNSPVIKASVNSNAQFLTVEISKLSLLIGEEFKLDLEL  904 (906)
Q Consensus       852 ~~~~~v~~ng~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~l~~~~~~~i~~~~  904 (906)
                      ++.++|.+||++....      +.++.+.+.+++.+.++++++++.-.++|..
T Consensus       858 ~~~~~~~~~~~~~~~~------~~y~~~~~~l~i~~~~~~~~~~~~~~~~~~~  904 (908)
T 3top_A          858 VTSVSISVSGMVITPS------FNNDPTTQVLSIDVTDRNISLHNFTSLTWHH  904 (908)
T ss_dssp             CCSCCCEESSSEECCC------CEECSSSCCEECCCTTSCCBTTTCC------
T ss_pred             CCEEEEEECCEEEEEE------EEECCCCCEEEEEECCCEEECCCCCCEEECC
T ss_conf             8428999899370014------7987877689999078421148874101002


No 4  
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=1.00  E-value=1  Score=1330.43  Aligned_cols=761  Identities=22%  Similarity=0.347  Sum_probs=645.8

Q ss_pred             CEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             80996899836887089999630378878888713899999981886999996499884336743578998777554577
Q 002568           44 GYSVRSVAVDSSLKSLTAGLGLIRSSSVYGPDIQSLNLFASFETKDRLRVRITDSKKQRWEIPQEIIPRQSYCTHCWLPE  123 (906)
Q Consensus        44 gY~v~~~~~~~~~~~~~a~L~~~~~~~~~g~di~~L~l~v~~~~~~~lrv~i~d~~~~r~evp~~~~~~~~~~~~~~~~~  123 (906)
                      .+.+.+.+.  +++++.....   .          -.+.|+..+++++||+...... .. .+..+++++.....+    
T Consensus        35 ~~~~~~~~~--~~~~~~~~~~---~----------~~~~i~~~~~~iiRv~~~~~~~-~~-~s~av~~~~~~~~~~----   93 (817)
T 4ba0_A           35 AVFYKEHKL--RNDGLVITTN---Q----------GNIRLQFKSEAAIEVLYRADSK-QL-PSFALAQPESAIKAQ----   93 (817)
T ss_dssp             CCCEEEEEC--CSSSEEEEET---T----------EEEEEEEEETTEEEEEESTTSC-CC-CCSSCSSTTCCCCCE----
T ss_pred             CCCEEEEEE--CCCEEEEEEC---C----------EEEEEEEECCCEEEEEEECCCC-CC-CCEEEECCCCCCCEE----
T ss_conf             764268999--2999999989---9----------5899999889989999977998-89-990775789888459----


Q ss_pred             CCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEEEEECCEEEEEEECCCCCCC
Q ss_conf             66899987889999611116997489999945829999991599478605999988862138831269998406876520
Q 002568          124 NRLNSPVNHQTGPGNHFLSDPTSDLVFTLHTTPFGFSVKRRSSGDILFDTSPETSHSDTFLVFKDQYIQLSSALPIERSH  203 (906)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~pf~~~v~r~~~~~vl~~t~~~~~~~~~~l~f~d~~~~~s~~lp~~~~~  203 (906)
                        +.        .+...++..++++++.++++||++++.+  +|++|+.+..+       +.+.++.+.+++.++ .+|+
T Consensus        94 --v~--------~~~~~~~i~t~~l~v~i~~~p~~i~~~~--~g~~l~~~~~~-------~~~~~~~~~~~~~l~-~~e~  153 (817)
T 4ba0_A           94 --LT--------ETENHLQFSGGTLTARIQKRPFAISYYR--DSELLLAEESG-------FQVNTDKINFRFYLS-PGEK  153 (817)
T ss_dssp             --EE--------ECSSEEEEECSSEEEEEETTTTEEEEEE--TTEEEEEEEEE-------EECC--CEEEEEECC-TTCC
T ss_pred             --EE--------ECCCEEEEEECCEEEEEECCCEEEEEEE--CCEEEEEECCC-------CEEECCCEEEEEECC-CCCE
T ss_conf             --99--------7499999996999999986886999997--99499982577-------355077159999869-9852


Q ss_pred             EEECCCCCCCCCCCCCCCEEEEEECCCCCCCC-CCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEE---CCEEEEE
Q ss_conf             34215445677656999749976436679898-8786651033787549999659999964998145761---9829999
Q 002568          204 LYGIGEHTKKSFKLTPNDTLTLWNADLASANV-DVNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDVVYT---GDRISYK  279 (906)
Q Consensus       204 ~YGlGE~~~~~~~l~~g~~~~l~n~D~~~~~~-~~~lYgs~Pf~l~~~~~~g~~~Gvf~~Ns~~~~v~~~---~~~~~~~  279 (906)
                      +|||||+.+. + .++|++++|||+|..++.. ..++|+++|||++.+   |  +|||++|+..+.++++   .+.++|+
T Consensus       154 ~yGlGe~~~~-l-~~~G~~~~l~n~d~~~~~~~~~~~y~~iPf~~s~~---~--yGvf~dn~~~~~~d~~~~~~~~~~~~  226 (817)
T 4ba0_A          154 ILGGGQRILG-M-DRRGQRFPLYNRAHYGYSDHSGQMYFGLPAIMSSK---Q--YILVFDNSASGAMDIGKTESDILQLE  226 (817)
T ss_dssp             EEEEESCBSC-S-CCTTEEEEECCCCCTTCCSCBSSCSCEEEEEEETT---S--EEEEECCCSSEEEEESSSSTTEEEEE
T ss_pred             EECCCCCCCC-C-CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECC---C--EEEEEECCCCEEEEEEECCCCEEEEE
T ss_conf             8857645787-3-45997998776587776778865333543899667---4--89999878866999970799879999


Q ss_pred             EECCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCC---
Q ss_conf             97786999998289998999999998399999998755710123077898899999999888299973799807788---
Q 002568          280 VTGGIIDLYFFAGPSPDSVIQQYTELIGRPAPMPYWSFGFHQCRYGYENVSDLKAVVAGYAKAGIPLEVMWTDIDYM---  356 (906)
Q Consensus       280 ~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~hqsr~gy~~~~~v~~vv~~~~~~~IP~D~iw~Didy~---  356 (906)
                      ++||.+|+|||.||+|++|+++|++|||+|+|||+||||||||||+|.+++++++++++|++++||||+||+|++||   
T Consensus       227 ~~gg~ld~y~~~G~~p~~v~~~Y~~ltG~~~lpP~WalG~~~sr~~Y~s~~ev~~vv~~~r~~~IP~Dvi~lD~dw~g~d  306 (817)
T 4ba0_A          227 AKSGRSAYILVAGNSYPSLIENFTQVTGRQPLPPRWALGSFASRFGYRSEAETRATVQKYKTEDFPLDTIVLDLYWFGKD  306 (817)
T ss_dssp             ESSSCCEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSBEECCBCCCSHHHHHHHHHHHHHHTCCCCEEEECGGGSCSS
T ss_pred             ECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
T ss_conf             82783799995699999999999986099877983113760542558999999999999887379974899836523775


Q ss_pred             --CCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEC-CCCEEEEECCCEECC
Q ss_conf             --99621155999999715999999999889989998289998889828889844268488409-955156672880113
Q 002568          357 --DGYKDFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISVNETYGTFIRGLKADIFIKRD-GVPYLGEVWPGKVYY  433 (906)
Q Consensus       357 --~~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~~~~y~~y~~g~~~~~fik~~-g~~~~g~~WpG~~~~  433 (906)
                        +.+++||||+++||+|  ++|+++||++|+|+++|++|+|+.+  ++.|+++.++|+|+|+. |+++.+.+|||.+++
T Consensus       307 ~~~~~gdftwd~~~FPdp--~~mv~~Lh~~G~k~vl~i~P~I~~~--s~~y~e~~~~g~~vk~~~G~~~~~~~w~G~~~~  382 (817)
T 4ba0_A          307 IKGHMGNLDWDKENFPTP--LDMMADFKQQGVKTVLITEPFVLTS--SKRWDDAVKAKALAKDPQGQPKAFELYFGNGGI  382 (817)
T ss_dssp             SSSCTTCCSCCTTTCSCH--HHHHHHHHHTTCEEEEEECSEEETT--STTHHHHHHTTCBCBCTTSSBCCEEETTEEEEE
T ss_pred             CCCCCCCCCCCCCCCCCH--HHHHHHHHHCCCEEEEEECCCCCCC--CHHHHHHHHCCEEEECCCCCEEEEEECCCCCEE
T ss_conf             635437620261008898--9999999977998999967774688--677898875998999899985788865898511


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             57889888999999999876127975399534654566679999999999997443478875677774434542113674
Q 002568          434 PDFVNPAAETFWKGEIQLFRDILPMDGLWLDMNELSNFITSLPTPHSTLDDPPYKINNNGVRRPINNKTVPATALHYRNL  513 (906)
Q Consensus       434 pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~ld~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~  513 (906)
                      |||+||+|++||.++++.+.+ .|+||||+|||||+++.                                .++.|+++ 
T Consensus       383 ~DftnP~ar~ww~~~~~~l~~-~GvDg~W~DmnEp~~~p--------------------------------~d~~~~~g-  428 (817)
T 4ba0_A          383 IDVFSKEGSRWFSSIYKDLSK-QGVAGWWGDLGEPEMHP--------------------------------EDTQHAIG-  428 (817)
T ss_dssp             BCTTSHHHHHHHHHHHHHHHH-HTCCEEEECCTTTSSCC--------------------------------TTCEETTE-
T ss_pred             ECCCCHHHHHHHHHHHHHHHH-CCCCEEEECCCCCCCCC--------------------------------CCCCCCCC-
T ss_conf             668998999999999999975-79748995688877688--------------------------------54221699-


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf             432210001355899999999985-199987998453369898410-017988467588974078885234647980630
Q 002568          514 TEYNTHNLYGLLEAKATHAALINV-NGKRPFILSRSTFVGSGKYTA-HWTGDNAATWNDLAYSIPSILNFGLFGIPMVGA  591 (906)
Q Consensus       514 ~~~~~HNlYg~~~~~at~~~l~~~-~~~RpfilsRS~f~Gs~ry~~-~W~GDn~s~W~~L~~sI~~~L~~~l~Gip~~G~  591 (906)
                      .++++||+||+++++++++++++. +++|||++|||+|+|+|||++ ||+|||.|+|++|+.+|+++|++||+|+||||+
T Consensus       429 ~~~~~hN~Y~~~~~~a~~e~~~~~~~~~RpfilsRs~~aGsqry~~~~WsGDn~s~W~~L~~~i~~~L~~~lsG~p~~g~  508 (817)
T 4ba0_A          429 DADTVHNAYGHRWAEMLYQQQLDQFPELRPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLASQVELALQMSLLGFGYIHS  508 (817)
T ss_dssp             EHHHHGGGHHHHHHHHHHHHHHHHCTTSCCCEEESCCCTTGGGGTEEEBCCSCBSSHHHHHTHHHHHHHHHHTTCTTCBC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             77886558899999999999997368986489988505754557766748863377789999899998775308972356


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             36899999--967799999763123523202678999775457732-799999999999998779999999999863984
Q 002568          592 DICGFSGD--TTEELCRRWIQLGAFYPFARDHSAIGTIRQELYFWD-TVAATARKVLGLRYRLLPYFYTLMYEAHMKGTA  668 (906)
Q Consensus       592 DIgGF~g~--~~~EL~~RW~QlgaF~P~~R~H~~~~~~~qeP~~~~-~~~~~~r~~i~lRY~LlPY~Yt~~~~a~~~G~P  668 (906)
                      |||||.|+  +++|||+||+|+|||+||||+|+. .+.++|||.|+ ++.+++|+++++||+||||+||+++++|++|.|
T Consensus       509 DIGGF~g~~~~~~EL~~RW~Q~gaF~P~~R~H~~-~~~~~epw~~~~~~~~~~r~~i~lRy~LlPYlYtl~~~a~~~G~P  587 (817)
T 4ba0_A          509 DLGGFADGETLDKEMYIRWLQYGVFQPVYRPHGQ-DHIPSEPVFQDEETKAILRPLVKLRYRMLPYIYTAAYQNTLTGMP  587 (817)
T ss_dssp             CBTCCBCCSSCCHHHHHHHHHHHHTSSCBCBCCB-TTSCCSGGGSCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHCCC
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             7277789998998999999886417721570378-888999853680799999999999999999999999999961987


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCCEEEE
Q ss_conf             22236878989811114475254349704820231894359997499906520158503643899499954899921299
Q 002568          669 VARPMFFSFPQDVKTYRIDTQFLIGKGVMVSPVLKSGAVSVDAYFPSGNWFDLFNYSNSVSLNSGKQITLDAPPDHINVH  748 (906)
Q Consensus       669 i~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~~~gG~~v~~~apld~iPvf  748 (906)
                      ||||||++||+|++++++++|||||++||||||+++|+++|+||||+|.|||+||++.+.  .||+++++++|+++||||
T Consensus       588 v~RPL~~efP~D~~~~~i~~Qfm~G~~lLVaPV~~~g~~~~~vYLP~g~Wyd~~tg~~~~--~Gg~~~~~~apl~~iPvf  665 (817)
T 4ba0_A          588 LMRPLFFSDEKNPALIDNKTSYFWGDSLLVTPITQAGVESVSIPAPKGVWFDFWKDTRYQ--TDGAPLTLPTDLHTIPVL  665 (817)
T ss_dssp             SEEEGGGGCTTCGGGGGCCSCEEETTTEEECCCCSTTCCEEEECCCSEEEEETTTCCEEE--ESSSCEEEECCSSCCCEE
T ss_pred             CCCCCCCCCCCCHHHHCCCCEEEECCCEEEEECCCCCCCEEEEECCCCEEEECCCCCEEE--ECCEEEEEECCCCCCEEE
T ss_conf             535544469997678444988543885799861258964799990882389868995996--499899997376433059


Q ss_pred             EECCEEEEECCCCCCCCCCCCCCEEEEEEECCC-CEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEE
Q ss_conf             437959860267643101248861799996899-8089999922895700134588099999999952575999996640
Q 002568          749 VREGNILALQGEALTTKAARKTPFHLLVVVSSK-ETSTGEVFLDDGEEVEMGKEAGKWSFVRFYSQMIKSNVNIRSEVLN  827 (906)
Q Consensus       749 vR~GsIiP~q~~~~~t~~~~~~p~~L~v~~~~~-g~A~g~ly~DDG~s~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~  827 (906)
                      ||+|+|||++++.+++.+.+.++++|.|+++.+ +.|+|+||+|||+|+++ .++|+|+.++|++..+++++++++....
T Consensus       666 vR~GsIiP~~~~~~~~~~~~~~~l~l~v~~~~~~~~a~~~ly~DDG~s~~~-y~~g~y~~~~~~~~~~~~~l~i~~~~~g  744 (817)
T 4ba0_A          666 VKAGAFMPYVPAVSTTEDYRSDSLEIHYYADASVPLAQGEIFEDDGKDPNS-IKRNQFDLLTLQATHTDNQLHFQLARTG  744 (817)
T ss_dssp             EETTCEEEECCCCSSGGGCCCSEEEEEEECCTTCSEEEEEEEECCSCCTTT-TTTTCSEEEEEEEEECSSEEEEEEEEES
T ss_pred             EECCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCHHH-CCCCCEEEEEEEEEECCCEEEEEEEECC
T ss_conf             967817440676666543587625999994588977999999789986423-0477489999999973999999998516


Q ss_pred             CCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCEEEEEE----CCCCEEEEECCCCCEEEEEEECCCEEECCCEEEEE
Q ss_conf             7545796329999999801556765436999899685430----37812346727983699999038243088589999
Q 002568          828 GDFALGQKWIIDKVTFIGLEKFKRFKGYKLKTCTGRNLIK----NSPVIKASVNSNAQFLTVEISKLSLLIGEEFKLDL  902 (906)
Q Consensus       828 g~y~~~~~~~~~~i~i~g~~~~~~~~~~~v~~ng~~~~~~----~~~~~~~~~~~~~~~~~l~i~~~~l~~~~~~~i~~  902 (906)
                      |+|.........+|+|+|+...    +..|.+||+++...    ..+...|+|+.+.+  +|.|+-.  .-+++++|.+
T Consensus       745 g~y~~~~~~~~~~v~i~g~~~~----p~~v~~~g~~~~~~~~~~~~~~~~~~yd~~~~--~l~i~~~--~~~~~~~~~~  815 (817)
T 4ba0_A          745 KGYRGMPERRATTLVIHNASDQ----YQHLDINGKTIAIAQADCASTPALACYDQERR--QLQLVFT--WGREALNLRL  815 (817)
T ss_dssp             CCCTTCCSSEEEEEEEETCCTT----CCEEEETTEEEECBCSCGGGSCCSEEEETTTT--EEEEEEE--ECSSCEEEEE
T ss_pred             CCCCCCCCCCEEEEEEECCCCC----CEEEEECCEECCCCCCCHHCCCCCEEEECCCC--EEEEEEC--CCCCCEEEEE
T ss_conf             7766777554799999798999----66999999996332010002466559947787--8999956--8998658996


No 5  
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=1.00  E-value=1  Score=1282.88  Aligned_cols=604  Identities=27%  Similarity=0.522  Sum_probs=532.2

Q ss_pred             EEEECC-EEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCC-CCCCCCCCCCCEEEEECCCCCCEEEEEE
Q ss_conf             388312-69998406876520342154456776569997499764366798-9887866510337875499996599999
Q 002568          184 LVFKDQ-YIQLSSALPIERSHLYGIGEHTKKSFKLTPNDTLTLWNADLASA-NVDVNLYGSHPFYIDVRSPNGTTHGVLL  261 (906)
Q Consensus       184 l~f~d~-~~~~s~~lp~~~~~~YGlGE~~~~~~~l~~g~~~~l~n~D~~~~-~~~~~lYgs~Pf~l~~~~~~g~~~Gvf~  261 (906)
                      +.++++ ++.+++.++ .+|++|||||+.+. + .++|++++|||+|++.. ....+||++||||++..   +.+||||+
T Consensus        33 ~~~~~~~~~~~~~~l~-~~e~~YGlGE~~~~-l-~~~g~~~~l~n~D~~~~~~~~~~lY~~~Pf~~~~~---~~~~Gvf~  106 (666)
T 3nsx_A           33 GEISQKEGFAFTYIMD-EDDIVYGLGESNRG-I-NKRGYCYISNCTDDPIHTEDKRSLYGAHNFIIVSG---KTTFGLFF  106 (666)
T ss_dssp             SEEECTTSEEEEEECC-TTCEEEECSSCSSC-S-SCTTEEEEECCCCCSSCCTTCCCCSEECCEEEEES---SSCEEEEE
T ss_pred             CEECCCCCEEEEEECC-CCCEEEECCCCCCC-C-CCCCCEEEECCCCCCCCCCCCHHHHHCCEEEEEEC---CCCEEEEE
T ss_conf             4022787637996248-66657504645556-4-45651786416899876565021010020799976---73346898


Q ss_pred             ECCCCEEEEEE---CCEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHH
Q ss_conf             64998145761---982999997786999998289998999999998399999998755710123077898899999999
Q 002568          262 LNSNGMDVVYT---GDRISYKVTGGIIDLYFFAGPSPDSVIQQYTELIGRPAPMPYWSFGFHQCRYGYENVSDLKAVVAG  338 (906)
Q Consensus       262 ~Ns~~~~v~~~---~~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~hqsr~gy~~~~~v~~vv~~  338 (906)
                      +|++.+++.++   .+.++|+++||.+|+|||.||+|++|++||++|||+|+|||+||||||||||+|.++++|++|+++
T Consensus       107 ~n~~~~~~d~~~~~~~~~~~~~~~g~lD~y~~~G~~p~~v~~~Y~~ltG~~~lpP~walG~~qsr~~Y~~~~~v~~v~~~  186 (666)
T 3nsx_A          107 DYPSKLTFDIGYTRMDTLKVSCENADLDIYVIEGENAYDIVKQFRRVIGRSYIPPKFAFGFGQSRWGYTTKEDFRAVAKG  186 (666)
T ss_dssp             ECCSCEEEEESSSSTTEEEEEESSCCEEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSEEEEETTCCSHHHHHHHHHH
T ss_pred             ECCCCEEEEECCCCCCEEEEEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             26875799703554664899983586689998189989999999986075547960102456353466898999999987


Q ss_pred             HHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEC
Q ss_conf             88829997379980778899621155999999715999999999889989998289998889828889844268488409
Q 002568          339 YAKAGIPLEVMWTDIDYMDGYKDFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISVNETYGTFIRGLKADIFIKRD  418 (906)
Q Consensus       339 ~~~~~IP~D~iw~Didy~~~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~~~~y~~y~~g~~~~~fik~~  418 (906)
                      |++++||||+||+|+|||+++++||||+++||+|  ++|+++||++|+|+++|+||+|+.+++|+.|++|.++|+|||+.
T Consensus       187 ~~~~~IP~dvi~lD~dy~~~~~~ft~d~~~FPdp--~~mv~~Lh~~G~k~v~~idP~i~~~~~~~~y~e~~~~g~fvk~~  264 (666)
T 3nsx_A          187 YRENHIPIDMIYMDIDYMQDFKDFTVNEKNFPDF--PEFVKEMKDQELRLIPIIDAGVKVEKGYEVYEEGVKNNYFCKRE  264 (666)
T ss_dssp             HHHTTCCCCEEEECGGGSSTTCTTCCCTTTCTTH--HHHHHHHHTTTCEEEEEEESCEECCTTCHHHHHHHHTTCBCBCT
T ss_pred             HHHCCCCCCEEEEECHHHHHHCCCCCCHHHCCCH--HHHHHHHHHCCCEEEEEECCCEEEECCCHHHHHHCCCCCCCCCC
T ss_conf             8862997316998307777514651072008778--99999998769159766315534424711776401038211477


Q ss_pred             -CCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCC----------CCCCCC-CC
Q ss_conf             -955156672880113578898889999999998761279753995346545666799999----------999999-97
Q 002568          419 -GVPYLGEVWPGKVYYPDFVNPAAETFWKGEIQLFRDILPMDGLWLDMNELSNFITSLPTP----------HSTLDD-PP  486 (906)
Q Consensus       419 -g~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~----------~~~ld~-pp  486 (906)
                       |++++|.||||.++||||+||+|++||.++++.+++ .|+||||+|||||++||.+++++          ....+. +.
T Consensus       265 ~G~~~~g~~WpG~~~~pDftnp~a~~ww~~~~~~~~~-~Gidg~W~DmnEp~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (666)
T 3nsx_A          265 DGSDFVAAVWPGDTHFPDMLNPEARKWFGDKYRFLID-QGIEGFWNDMNEPAIFYSSEGLAEAKEFAGEFAKDTEGKIHP  343 (666)
T ss_dssp             TSCBCCEEETTEEEECBCTTSHHHHHHHHHTTHHHHT-TTCCEEEEESTTTCCSEEHHHHHHHHHHHHHHHHCCSSCSCH
T ss_pred             CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCHHHHHCCCCCCEEECHHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf             8982268845775678432697899986555468785-462332104688624755878999999987644256661123


Q ss_pred             CCCCCCCCCCCCCCCC-CCCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCCCC
Q ss_conf             4434788756777744-345421136---74432210001355899999999985-199987998453369898410017
Q 002568          487 YKINNNGVRRPINNKT-VPATALHYR---NLTEYNTHNLYGLLEAKATHAALINV-NGKRPFILSRSTFVGSGKYTAHWT  561 (906)
Q Consensus       487 y~~~~~g~~~~l~~~t-~~~~~~h~~---~~~~~~~HNlYg~~~~~at~~~l~~~-~~~RpfilsRS~f~Gs~ry~~~W~  561 (906)
                      +.+..  ....+.... -..+..|..   ...|+++||+||+++++|+++++++. +++|||+||||+|+|+|||++||+
T Consensus       344 ~~~~~--~~~~l~~~~~~~~~~~h~~~g~~~~~~~~hNlYg~~~~~at~e~l~~~~~~~RpfilsRS~~aGsqry~~~W~  421 (666)
T 3nsx_A          344 WAMQA--KMKDIVNSPEDYKRFYHNVNGKKIRHDKVHNLFGYNMTRAAGEAFERIDPEKRFLMFSRSSYIGMHRYGGIWM  421 (666)
T ss_dssp             HHHHH--HHHHTTTCHHHHTSCEEEETTEEEEGGGGGGGHHHHHHHHHHHHHHHHCTTCCCEEEESSEETTGGGTCEEEE
T ss_pred             HHHHH--HHHHHCCCHHHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCEECEEECCCEEC
T ss_conf             45778--8765228857878776015882875113122202000177889998619874399986100111000375631


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             98846758897407888523464798063036899999967799999763123523202678999775457732799999
Q 002568          562 GDNAATWNDLAYSIPSILNFGLFGIPMVGADICGFSGDTTEELCRRWIQLGAFYPFARDHSAIGTIRQELYFWDTVAATA  641 (906)
Q Consensus       562 GDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~g~~~~EL~~RW~QlgaF~P~~R~H~~~~~~~qeP~~~~~~~~~~  641 (906)
                      |||.|+|++|+.+|+++|++||+|+||||+|||||.|++++|||+||+|+|||+||||+|+..++.+||||.|+ +.+++
T Consensus       422 GDn~s~W~~L~~sI~~~L~~~l~G~p~~g~DIGGF~g~~~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~ePw~~~-~~~~~  500 (666)
T 3nsx_A          422 GANKSWWSHILLNLKMLPSLNMCGFMYTGADLGGFGDDTTRDLLLRFLALGVFTPLMRDHAAEGTREQECYQFE-NIEDF  500 (666)
T ss_dssp             CCSSCCTHHHHHHHHHHHHHHHTTCCSEEECCCCCBTCSCHHHHHHHHHHHTTSSSEEEEECSSBCCCCGGGST-TTHHH
T ss_pred             CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC-CHHHH
T ss_conf             78713899998764425644300046655655767877348999999987337665504544574301131147-88998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEEC
Q ss_conf             99999999877999999999986398422236878989811114475254349704820231894359997499906520
Q 002568          642 RKVLGLRYRLLPYFYTLMYEAHMKGTAVARPMFFSFPQDVKTYRIDTQFLIGKGVMVSPVLKSGAVSVDAYFPSGNWFDL  721 (906)
Q Consensus       642 r~~i~lRY~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~  721 (906)
                      |+++++||+||||+||++++||++|.|||||||++||+|++++++++|||||++||||||+++|+++|+||||+|.|||+
T Consensus       501 r~~i~lRy~LlPYlYtl~~~a~~~G~Pv~RPL~~efP~D~~~~~i~dQfm~G~~LLVaPV~~~g~~~~~vYLP~g~W~d~  580 (666)
T 3nsx_A          501 RSVINARYRLVPYLYSEYMKAALNDDMYFKPLGFVYPDDKMAIRVEDQLMLGNEIMIAPVYEQNARGRYVYLPEEMKFIK  580 (666)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCCSEECHHHHCTTCTTGGGCCSCEEETTTEEECCCCSTTCSEEEEEESSCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHEECCCEEEEEEEEECCCCEEEECCHHEEEEE
T ss_conf             77765554567888999999873488055111035787378776445521266247721332056613897630507999


Q ss_pred             CC------CCEEEECCCCEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCC
Q ss_conf             15------850364389949995489992129943795986026764310124886179999689980899999228957
Q 002568          722 FN------YSNSVSLNSGKQITLDAPPDHINVHVREGNILALQGEALTTKAARKTPFHLLVVVSSKETSTGEVFLDDGEE  795 (906)
Q Consensus       722 ~t------~~~~~~~~gG~~v~~~apld~iPvfvR~GsIiP~q~~~~~t~~~~~~p~~L~v~~~~~g~A~g~ly~DDG~s  795 (906)
                      |+      ++..   .||+ +.+++|+++||||||+|+|||++++.+++.+.+.++++|+|+    +.|+|+||+|||+|
T Consensus       581 ~~~~~~~t~~~~---~gG~-~~v~apl~~iPvfvR~GsIiP~~~~~~~t~~~~~~~~~l~v~----~~a~~~LY~DDG~s  652 (666)
T 3nsx_A          581 FMPDGSISEEVL---EKGV-HYVDVALNEVPLFIRSGKCIPVAEAAECVKDIDTENMQLIGY----EGSSYTLYEDDGIH  652 (666)
T ss_dssp             ECTTSCEEEEEE---CSEE-EEEECCTTCEEEEEETTCEEEECCCCSSGGGCCCSSCEEEEC----TTCEEEEECCCSSS
T ss_pred             EECCCCEEEEEE---CCCC-EEEEEECCEEEEEEECCCEEEECCCHHHHHHCCHHHEEEEEC----CCCCEEEECCCCCC
T ss_conf             704883147870---5873-158853210469987583666455022032258737079840----89723677479824


Q ss_pred             CCCCCCCCE-EEEEE
Q ss_conf             001345880-99999
Q 002568          796 VEMGKEAGK-WSFVR  809 (906)
Q Consensus       796 ~~~~~~~g~-~~~~~  809 (906)
                      ++|  ++|+ |+.+.
T Consensus       653 ~~y--~~G~~y~~i~  665 (666)
T 3nsx_A          653 KDY--DKKENYRVLT  665 (666)
T ss_dssp             CCC--CCGGGEEEEE
T ss_pred             CCC--CCCCCEEEEC
T ss_conf             587--7764348615


No 6  
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*
Probab=1.00  E-value=1  Score=1233.44  Aligned_cols=791  Identities=21%  Similarity=0.351  Sum_probs=610.9

Q ss_pred             EEEEEEEEEECCEEEEEEECCCCCCCCCCCC-C----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf             3899999981886999996499884336743-5----------7899877755457766899987889999611116997
Q 002568           78 SLNLFASFETKDRLRVRITDSKKQRWEIPQE-I----------IPRQSYCTHCWLPENRLNSPVNHQTGPGNHFLSDPTS  146 (906)
Q Consensus        78 ~L~l~v~~~~~~~lrv~i~d~~~~r~evp~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (906)
                      .+.++|++++++++||++.+....+ +++.. .          ++.......             ..+..+...+..++.
T Consensus        65 ~~~~~i~~~~~~i~Rv~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~i~t~  130 (1027)
T 2x2h_A           65 PVQVQVTSYNNNSYRVRFNPDGPIR-DVTRGPILKQQLDWIRTQELSEGCDP-------------GMTFTSEGFLTFETK  130 (1027)
T ss_dssp             EEEEEEEETTTTEEEEEECTTSSCC-CCSSSSSCHHHHHHHHHHHHHTTCCC-------------CCEECTTSCEEEECS
T ss_pred             CEEEEEEEECCCEEEEEEECCCCCC-CCCCCCCCCCCCCCEEEECCCCCCCC-------------EEEECCCCEEEEEEC
T ss_conf             7189999965996999984698756-64335333456551133045556773-------------167437986999928


Q ss_pred             CEEEEEEECCCEEEEEECCCCCEEEECCC-CCCCC---CCEEEEECCEE---------EEEEECCCCCCCEEECCCCCCC
Q ss_conf             48999994582999999159947860599-99888---62138831269---------9984068765203421544567
Q 002568          147 DLVFTLHTTPFGFSVKRRSSGDILFDTSP-ETSHS---DTFLVFKDQYI---------QLSSALPIERSHLYGIGEHTKK  213 (906)
Q Consensus       147 ~l~~~i~~~pf~~~v~r~~~~~vl~~t~~-~~~~~---~~~l~f~d~~~---------~~s~~lp~~~~~~YGlGE~~~~  213 (906)
                      ++++.|. .||.++|+|+++|++|+++.. .....   ...+.|.++++         .+++.+. .+|++|||||+.+.
T Consensus       131 ~l~v~i~-~~~~i~v~~~~~g~~l~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~E~~yGlGE~~g~  208 (1027)
T 2x2h_A          131 DLSVIIY-GNFKTRVTRKSDGKVIMENDEVGTASSGNKCRGLMFVDRLYGNAIASVNKNFRNDAV-KQEGFYGAGEVNCK  208 (1027)
T ss_dssp             SEEEEEC-TTCCEEEEETTTCCEEEEBCEECCSSSCCEEEEEEEECTTTCCCEEEEEECCTTCTT-TCCEEEECTTCCEE
T ss_pred             CEEEEEE-CCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC-CCCCEECCCCCCCC
T ss_conf             7999994-683899998899859876055554534444554211332234322322136998348-99837877654676


Q ss_pred             ---CCCC-CCCCEEEEEECCCCCCCC------------C----CCCCCCCCEEEEECCC---CCCEEEEEEECCCCEEEE
Q ss_conf             ---7656-999749976436679898------------8----7866510337875499---996599999649981457
Q 002568          214 ---SFKL-TPNDTLTLWNADLASANV------------D----VNLYGSHPFYIDVRSP---NGTTHGVLLLNSNGMDVV  270 (906)
Q Consensus       214 ---~~~l-~~g~~~~l~n~D~~~~~~------------~----~~lYgs~Pf~l~~~~~---~g~~~Gvf~~Ns~~~~v~  270 (906)
                         ...| ++|+++++||+|+..+..            +    .+||++|||||++...   ++..+|||++|++...++
T Consensus       209 f~~~~~L~~rG~~~~~wN~D~~~y~~~~~~~~g~~s~~dp~~~~~lY~siPf~is~~~~g~~~~~~yGvf~dn~~~~~fD  288 (1027)
T 2x2h_A          209 YQDTYILERTGIAMTNYNYDNLNYNQWDLRPPHHDGALNPDYYIPMYYAAPWLIVNGCAGTSEQYSYGWFMDNVSQSYMN  288 (1027)
T ss_dssp             ETTEEESCCCSCEEEECCCCCGGGCCGGGCCTTCCSCCCCCTTSCCSEECCEEEEEESTTSTTCEEEEEEECCCSSEEEE
T ss_pred             CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEE
T ss_conf             66665414578672114605654455444566776545743343434530669984356677785699999179733897


Q ss_pred             EEC--------CEEEEEEECCEEEEEEEE--CCCHHHHHHHHHHHHCC----------CCCCCCCCCCCCEEECCCCC--
Q ss_conf             619--------829999977869999982--89998999999998399----------99999875571012307789--
Q 002568          271 YTG--------DRISYKVTGGIIDLYFFA--GPSPDSVIQQYTELIGR----------PAPMPYWSFGFHQCRYGYEN--  328 (906)
Q Consensus       271 ~~~--------~~~~~~~~gG~lD~y~f~--G~~p~~vi~qY~~ltG~----------p~lpP~WalG~hqsr~gy~~--  328 (906)
                      ++.        ....+.+++|.+|+|||.  ||+|++|++||++|||+          |+|||+||||||||||||.+  
T Consensus       289 ~g~~~~~~~~~~~~~~~~~~g~lD~y~~~g~G~tp~~Vv~~Yt~LTGkp~~~~~ltGrp~lpP~WalGy~qsR~gY~s~~  368 (1027)
T 2x2h_A          289 TGDTTWNSGQEDLAYMGAQYGPFDQHFVYGAGGGMECVVTAFSLLQGKEFENQVLNKRSVMPPKYVFGFFQGVFGTSSLL  368 (1027)
T ss_dssp             SSCCGGGCCCTTEEEEEESSCCEEEEEECCSSSSHHHHHHHHHHHTCCGGGTCSSCSSSCCCCGGGGSCEEEEECCCBSS
T ss_pred             CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCC
T ss_conf             65554456755259999726875689999379999999999999738865223234677879777741012432445443


Q ss_pred             ---------HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCC----------CCHHHHHHHHHHHHCCCEEE
Q ss_conf             ---------88999999998882999737998077889962115599999----------97159999999998899899
Q 002568          329 ---------VSDLKAVVAGYAKAGIPLEVMWTDIDYMDGYKDFTLDPINF----------PVNSMQNFVNTLHQNGQRYV  389 (906)
Q Consensus       329 ---------~~~v~~vv~~~~~~~IP~D~iw~Didy~~~~~~Ft~d~~~F----------P~~~l~~~v~~L~~~g~k~v  389 (906)
                               +++|++|+++|++++||||+||+|||||+++++||||+++|          |+|  ++|+++||++|+|++
T Consensus       369 ~~~y~~~~~~~~v~~vv~~~r~~~IPlDvi~lDidymd~~r~FT~D~~~~~~~~~~~~~fPdp--~~mv~~Lh~~G~k~v  446 (1027)
T 2x2h_A          369 RAHMPAGENNISVEEIVEGYQNNNFPFEGLAVDVDMQDNLRVFTTKGEFWTANRVGTGGDPNN--RSVFEWAHDKGLVCQ  446 (1027)
T ss_dssp             GGGCCCCTTCCBHHHHHHHHHHTTCCCCEEEECGGGSSTTCTTCCCGGGBTTSSCCCSCCTTS--CBHHHHHHHTTCEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCCH--HHHHHHHHHCCEEEE
T ss_conf             323344421899999999898729997525973334468776314534375000244568999--999999986880899


Q ss_pred             EEECCCCCCC---CCHHHHHHHHHCCEEEEEC------------C--CCEEEEECCC-----EECCCCCCCHHHHHHHHH
Q ss_conf             9828999888---9828889844268488409------------9--5515667288-----011357889888999999
Q 002568          390 LILDPGISVN---ETYGTFIRGLKADIFIKRD------------G--VPYLGEVWPG-----KVYYPDFVNPAAETFWKG  447 (906)
Q Consensus       390 ~~idP~I~~~---~~y~~y~~g~~~~~fik~~------------g--~~~~g~~WpG-----~~~~pDf~np~a~~ww~~  447 (906)
                      +|++|+|+.+   ..|.+|++|.++|+|+|+.            |  .+|+|.||||     .++||||+||++++||.+
T Consensus       447 ~iidP~i~~~~~~~~y~~~~e~~~~g~fvk~~~~~~~~~~~~~dG~~~~y~g~vWpg~~~~g~~~~pDFtnp~a~~WW~~  526 (1027)
T 2x2h_A          447 TNITCFLRNDNEGQDYEVNQTLRERQLYTKNDSLTGTDFGMTDDGPSDAYIGHLDYGGGVECDALFPDWGRPDVAEWWGN  526 (1027)
T ss_dssp             EEECSCEECCCTTCCCHHHHHHHHTTCBCBSCCSSCCCCCCCTTCCTTBCCEEEECSTTCEEEEECBCTTSTTHHHHHHH
T ss_pred             EEECCEECCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEECCCCCCHHHHHHHHH
T ss_conf             97364452487655667788787688488647567655222578987502554325888647424658898789999999


Q ss_pred             HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCC-----CCCCC--CCCCCCCCCC
Q ss_conf             99987612797539953465456667999999999999744347-88-7567777443-----45421--1367443221
Q 002568          448 EIQLFRDILPMDGLWLDMNELSNFITSLPTPHSTLDDPPYKINN-NG-VRRPINNKTV-----PATAL--HYRNLTEYNT  518 (906)
Q Consensus       448 ~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~ld~ppy~~~~-~g-~~~~l~~~t~-----~~~~~--h~~~~~~~~~  518 (906)
                      +++.|+ .+|+||||+|||||++|+.+...+....  +...... .. ....++.++.     ..+..  +++...+...
T Consensus       527 ~~k~l~-~~GvDg~W~DmnEPs~f~~~~g~~~~~~--~~~~~~~~~~p~~~~~~~~~y~p~~~~~~~~~~~~g~~~~~~~  603 (1027)
T 2x2h_A          527 NYKKLF-SIGLDFVWQDMTVPAMMPHKIGDDINVK--PDGNWPNADDPSNGQYNWKTYHPQVLVTDMRYENHGREPMVTQ  603 (1027)
T ss_dssp             TTHHHH-TTTCCEEEECSTTTCCCCCBTTSCTTCC--CCTTCSBTTBCCTTCBCTTSSCTTCEEECSSSTTSCEEEGGGT
T ss_pred             HHHHHH-HCCCCEEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             999985-2798789970899753444456544555--5556545556655543443334443345531124676420226


Q ss_pred             CCCHHHHHHHHH-HHHHHH-----HCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf             000135589999-999998-----51999879984533698984100179884675889740788852346479806303
Q 002568          519 HNLYGLLEAKAT-HAALIN-----VNGKRPFILSRSTFVGSGKYTAHWTGDNAATWNDLAYSIPSILNFGLFGIPMVGAD  592 (906)
Q Consensus       519 HNlYg~~~~~at-~~~l~~-----~~~~RpfilsRS~f~Gs~ry~~~W~GDn~s~W~~L~~sI~~~L~~~l~Gip~~G~D  592 (906)
                      ||+|++.+.+++ ++++.+     .+++||||||||+|+|+|||+++|+|||.++|++|+.+|+++|++||||+||||+|
T Consensus       604 ~n~~~~~~~~at~~eg~~~~~~~l~~~kRpfilsRs~~aGsqRy~~~WsGDn~s~W~~L~~si~~~L~~~lsG~p~~g~D  683 (1027)
T 2x2h_A          604 RNIHAYTLCESTRKEGIVENADTLTKFRRSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIANNINMNMSCLPLVGSD  683 (1027)
T ss_dssp             GGGHHHHHHHHHHHHTTTTTGGGCCSCSCCCEEESCEETTGGGTCEEECCSCCSSHHHHHHHHHHHHHHHHTTCCSEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             67789999999998876643431266763179962324766776654488645645568999999998875098702577


Q ss_pred             CCCCCC--------CCCHHHHHHHHHHCCCCCEECCCCC-------CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             689999--------9967799999763123523202678-------9997754577327999999999999987799999
Q 002568          593 ICGFSG--------DTTEELCRRWIQLGAFYPFARDHSA-------IGTIRQELYFWDTVAATARKVLGLRYRLLPYFYT  657 (906)
Q Consensus       593 IgGF~g--------~~~~EL~~RW~QlgaF~P~~R~H~~-------~~~~~qeP~~~~~~~~~~r~~i~lRY~LlPY~Yt  657 (906)
                      ||||.|        ++++|||+||+|+|||+||||+|+.       .++.+||||.|++.++++|+++++||+||||+||
T Consensus       684 IgGF~g~~~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~~~~~~ePw~~~~~~~~~r~~i~lRy~LlPYlYt  763 (1027)
T 2x2h_A          684 IGGFTSYDNENQRTPCTGDLMVRYVQAGCLLPWFRNHYDRWIESKDHGKDYQELYMYPNEMDTLRKFVEFRYRWQEVLYT  763 (1027)
T ss_dssp             TTCSSCCCSSCTTCCCCHHHHHHHHHHHTTSSSCEEEEEBCBTTBCCSBSCCCGGGCTTTHHHHHHHHHHHHHTHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             47667777654568999899999988635771057236765545567887666502573899999999999987999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCEEEECC----CEEEEEEECCCCEEEEEECCC-CEEEECC---CCCEE-
Q ss_conf             9999986398422236878989811114-475254349----704820231894359997499-9065201---58503-
Q 002568          658 LMYEAHMKGTAVARPMFFSFPQDVKTYR-IDTQFLIGK----GVMVSPVLKSGAVSVDAYFPS-GNWFDLF---NYSNS-  727 (906)
Q Consensus       658 ~~~~a~~~G~Pi~RPL~~efP~D~~~~~-i~~Qfm~G~----~LLVaPVl~~g~t~~~vYlP~-G~Wyd~~---t~~~~-  727 (906)
                      ++++||.+|.|||||||+ ||+|++++. +++|||||+    +||||||+++|+++|+||||+ |.|||+|   ++... 
T Consensus       764 l~~~a~~~G~Pi~RPl~~-fp~D~~~~~~~~~qfm~G~~~G~~lLVaPV~~~g~~~~~vYLP~~g~W~d~~~~~~~~~~~  842 (1027)
T 2x2h_A          764 AMYQNAAFGKPIIKAASM-YNNDSNVRRAQNDHFLLGGHDGYRILCAPVVWENSTERELYLPVLTQWYKFGPDFDTKPLE  842 (1027)
T ss_dssp             HHHHHHHHCCCSSEEGGG-SSSCSSHHHHTTTCEEECTTTSCSEEECCCCSTTCCEEEEECCSSSEEEECSGGGGGSCCC
T ss_pred             HHHHHHHHCCCEECCCCC-CCCCHHHHHCCCCEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCEEE
T ss_conf             999998649962533234-7898778521585699747777887999540379806899979898568614456687202


Q ss_pred             EECCCCEEE-EECCCCCCEEEEEECCEEEEECCCC-----CCCCCCCCCCEEEEEEECCCCEEEEEEEEECCC-CCCCCC
Q ss_conf             643899499-9548999212994379598602676-----431012488617999968998089999922895-700134
Q 002568          728 VSLNSGKQI-TLDAPPDHINVHVREGNILALQGEA-----LTTKAARKTPFHLLVVVSSKETSTGEVFLDDGE-EVEMGK  800 (906)
Q Consensus       728 ~~~~gG~~v-~~~apld~iPvfvR~GsIiP~q~~~-----~~t~~~~~~p~~L~v~~~~~g~A~g~ly~DDG~-s~~~~~  800 (906)
                      ..+.||+++ ++++|+++||||||+|+|||++...     ..+...+.++++|+|+++.++.|+|.||+|||+ +.++ .
T Consensus       843 ~~~~gG~~i~~~~apl~~iPvfvR~GsIiP~~~~~~~~~~~~~~~~~~~~~~l~v~~~~~g~a~g~ly~DDG~~~~~~-~  921 (1027)
T 2x2h_A          843 GAMNGGDRIYNYPVPQSESPIFVREGAILPTRYTLNGENKSLNTYTDEDPLVFEVFPLGNNRADGMCYLDDGGVTTNA-E  921 (1027)
T ss_dssp             CCEETTCEEEEEECCTTCCCEEEETTBEEEEECCTTSCCCCGGGCCTTSCEEEEECSCBTTEEEEEEEECCTTSSSHH-H
T ss_pred             EEECCCEEEEEEECCCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC-C
T ss_conf             597498399999657656645986781754235445555443322357745999997899937789999099841130-1


Q ss_pred             CCCEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCEEEE------EE-------
Q ss_conf             58809999999995257599999664075457963299999998015567654369998996854------30-------
Q 002568          801 EAGKWSFVRFYSQMIKSNVNIRSEVLNGDFALGQKWIIDKVTFIGLEKFKRFKGYKLKTCTGRNL------IK-------  867 (906)
Q Consensus       801 ~~g~~~~~~~~~~~~~~~~~i~~~~~~g~y~~~~~~~~~~i~i~g~~~~~~~~~~~v~~ng~~~~------~~-------  867 (906)
                      ++|+|+.++|++..++.+++|+.....+.|.....+   .|++.+...     +..|.+||....      ..       
T Consensus       922 ~~G~y~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~---~~~~~~~~~-----p~~v~v~g~~~~~~~~~~~~~~~~~~~  993 (1027)
T 2x2h_A          922 DNGKFSVVKVAAEQDGGTETITFTNDCYEYVFGGPF---YVRVRGAQS-----PSNIHVSSGAGSQDMKVSSATSRAALF  993 (1027)
T ss_dssp             HHCCCEEEEEEEEEETTEEEEEEEEEEECSCCCSCE---EEEEETCCC-----CSCEEEECSSCCEECEECSCCSHHHHH
T ss_pred             CCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCE---EEEEECCCC-----CCEEEECCEECCCCCCCCCHHHHHHHH
T ss_conf             588689999999967998999980466765677667---999945799-----738998882023332354102334453


Q ss_pred             -CCCCEEEEECCCCCEEEEEEECCCEEECCCEEEEE
Q ss_conf             -37812346727983699999038243088589999
Q 002568          868 -NSPVIKASVNSNAQFLTVEISKLSLLIGEEFKLDL  902 (906)
Q Consensus       868 -~~~~~~~~~~~~~~~~~l~i~~~~l~~~~~~~i~~  902 (906)
                       .++...|+++.+++  ++.|+-++.. .++..|.+
T Consensus       994 ~~~~~~~w~~d~~~~--~~~vk~~~~~-~~~~~i~~ 1026 (1027)
T 2x2h_A          994 NDGENGDFWVDQETD--SLWLKLPNVV-LPDAVITI 1026 (1027)
T ss_dssp             HTCCTTEEEEETTTT--EEEEEECGGG-TTSEEEEE
T ss_pred             HCCCCCEEEEECCCC--EEEEECCCCC-CCCEEEEE
T ss_conf             147774479838998--8999848987-77558996


No 7  
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=1.00  E-value=1  Score=1217.26  Aligned_cols=610  Identities=28%  Similarity=0.568  Sum_probs=536.5

Q ss_pred             EEECCEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCC-CCCCCCCCCEEEEECCCCCCEEEEEEEC
Q ss_conf             883126999840687652034215445677656999749976436679898-8786651033787549999659999964
Q 002568          185 VFKDQYIQLSSALPIERSHLYGIGEHTKKSFKLTPNDTLTLWNADLASANV-DVNLYGSHPFYIDVRSPNGTTHGVLLLN  263 (906)
Q Consensus       185 ~f~d~~~~~s~~lp~~~~~~YGlGE~~~~~~~l~~g~~~~l~n~D~~~~~~-~~~lYgs~Pf~l~~~~~~g~~~Gvf~~N  263 (906)
                      ..+++++.+++.++ .+|++|||||+.+. + ..+|++++|||+|++.+.. ..++|++||||+++++  +..||||++|
T Consensus        46 ~~~~~~~~~~~~~~-~~e~~yGlGE~~~~-l-~~~g~~~~l~n~D~~~~~~~~~~lY~~iPf~~~~~~--~~~~Gvf~~n  120 (693)
T 2g3m_A           46 VQQGNKVIVEKSLD-LKEHIIGLGEKAFE-L-DRKRKRYVMYNVDAGAYKKYQDPLYVSIPLFISVKD--GVATGYFFNS  120 (693)
T ss_dssp             EEETTEEEEEEECC-TTCEEEECSSCSSC-S-SCCSEEEEECCCCCCSCCTTCCCCSEECCEEEEEET--TEEEEEEECC
T ss_pred             EEECCEEEEEEECC-CCCCEEECCCCCCC-C-CCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECC--CCEEEEEEEC
T ss_conf             99689799999848-99858937887988-6-879978886864777668787665451427999716--9989999957


Q ss_pred             CCCEEEEEE---CCEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf             998145761---98299999778699999828999899999999839999999875571012307789889999999988
Q 002568          264 SNGMDVVYT---GDRISYKVTGGIIDLYFFAGPSPDSVIQQYTELIGRPAPMPYWSFGFHQCRYGYENVSDLKAVVAGYA  340 (906)
Q Consensus       264 s~~~~v~~~---~~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~hqsr~gy~~~~~v~~vv~~~~  340 (906)
                      ++.+++.++   .+.++|+++||.+|+|||.||+|++|+++|+++||+|+|||+||||||||||+|.+++++++++++++
T Consensus       121 ~~~~~~d~~~~~~~~~~~~~~~g~lD~y~~~G~~~~~v~~~Y~~ltG~p~~pP~WalG~~qsr~~y~~~~ev~~v~~~~~  200 (693)
T 2g3m_A          121 ASKVIFDVGLEEYDKVIVTIPEDSVEFYVIEGPRIEDVLEKYTELTGKPFLPPMWAFGYMISRYSYYPQDKVVELVDIMQ  200 (693)
T ss_dssp             CSCEEEEESSSSTTEEEEEESSSCEEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSEEEEETTCCSHHHHHHHHHHHH
T ss_pred             CCCEEEEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             98439997023586699998799779999968999999999999769998996020375435876889999999999999


Q ss_pred             HCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEC-C
Q ss_conf             829997379980778899621155999999715999999999889989998289998889828889844268488409-9
Q 002568          341 KAGIPLEVMWTDIDYMDGYKDFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISVNETYGTFIRGLKADIFIKRD-G  419 (906)
Q Consensus       341 ~~~IP~D~iw~Didy~~~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~~~~y~~y~~g~~~~~fik~~-g  419 (906)
                      +++||||+||+|+|||+++++||||+++||+|  ++|+++||++|+|+++|++|+|+.++.|..|++|.+  +|||+. |
T Consensus       201 ~~~IP~dvi~lD~~y~~~~~dft~d~~~FPdp--~~mv~~Lh~~G~k~~l~i~P~I~~~~~y~~y~e~~~--~fvk~~~G  276 (693)
T 2g3m_A          201 KEGFRVAGVFLDIHYMDSYKLFTWHPYRFPEP--KKLIDELHKRNVKLITIVDHGIRVDQNYSPFLSGMG--KFCEIESG  276 (693)
T ss_dssp             HTTCCEEEEEECGGGSBTTBTTCCCTTTCSCH--HHHHHHHHHTTCEEEEEECSCEECCTTCHHHHHHTT--SBCEETTS
T ss_pred             HCCCCCCEEEEECCEECCCCCCEECHHHCCCH--HHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH--HEEECCCC
T ss_conf             72998546998466006886303774458998--999999997898899995676467887399999875--51898999


Q ss_pred             CCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             55156672880113578898889999999998761279753995346545666799999999999974434788756777
Q 002568          420 VPYLGEVWPGKVYYPDFVNPAAETFWKGEIQLFRDILPMDGLWLDMNELSNFITSLPTPHSTLDDPPYKINNNGVRRPIN  499 (906)
Q Consensus       420 ~~~~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~ld~ppy~~~~~g~~~~l~  499 (906)
                      +++.|.||||.+++|||+||+|++||.++++.+++ .|+||||+|||||++|+.... ....+..||+.+...     ..
T Consensus       277 ~~~~g~~W~g~~~~~Dftnp~a~~ww~~~~~~l~~-~GiDg~w~DmnEp~~f~~~~~-~~~~~~~~p~~~~~~-----~~  349 (693)
T 2g3m_A          277 ELFVGKMWPGTTVYPDFFREDTREWWAGLISEWLS-QGVDGIWLDMNEPTDFSRAIE-IRDVLSSLPVQFRDD-----RL  349 (693)
T ss_dssp             SBCEEEETTEEEECBCTTSHHHHHHHHHHHHHHHT-TTCCEEEECSTTTCCCHHHHH-HHHHHTTSCSCBCCC-----GG
T ss_pred             CEEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCC-CCCCCCCCCCCCCCC-----CC
T ss_conf             98787747997450289998999999999999873-697489971687543466544-333335775333565-----33


Q ss_pred             CCCCCCCCCCCC-C--CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             744345421136-7--4432210001355899999999985199987998453369898410017988467588974078
Q 002568          500 NKTVPATALHYR-N--LTEYNTHNLYGLLEAKATHAALINVNGKRPFILSRSTFVGSGKYTAHWTGDNAATWNDLAYSIP  576 (906)
Q Consensus       500 ~~t~~~~~~h~~-~--~~~~~~HNlYg~~~~~at~~~l~~~~~~RpfilsRS~f~Gs~ry~~~W~GDn~s~W~~L~~sI~  576 (906)
                      .+|+|+++.|+. +  ..|+++||+||+++++|+++++++..++|||+||||+|+|+|||+++|+|||.++|++|+.+|+
T Consensus       350 ~~t~p~d~~~~~~g~~~~~~~~hN~Y~~~~~~a~~e~l~~~~~~RpfilsRS~~aGsqry~~~W~GD~~s~W~~L~~~i~  429 (693)
T 2g3m_A          350 VTTFPDNVVHYLRGKRVKHEKVRNAYPLYEAMATFKGFRTSHRNEIFILSRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQ  429 (693)
T ss_dssp             GGSCCTTEEEEETTEEEEHHHHGGGHHHHHHHHHHHHHHHTTCCSCCEEESCEETTGGGTCEEECCSCCCSHHHHHHHHH
T ss_pred             CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             35567530463678746588862135689999999999961788747998254588888742359985357999999999


Q ss_pred             HHHHCCCCCCCEEEECCCCCCCC------CCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHH
Q ss_conf             88523464798063036899999------967799999763123523202678999775457732-79999999999999
Q 002568          577 SILNFGLFGIPMVGADICGFSGD------TTEELCRRWIQLGAFYPFARDHSAIGTIRQELYFWD-TVAATARKVLGLRY  649 (906)
Q Consensus       577 ~~L~~~l~Gip~~G~DIgGF~g~------~~~EL~~RW~QlgaF~P~~R~H~~~~~~~qeP~~~~-~~~~~~r~~i~lRY  649 (906)
                      ++|++||+|+||||+|||||.|+      +++|||+||+|+|||+|+||+|+..++.+||||.|+ ++.+++|+++++||
T Consensus       430 ~~L~~~l~G~p~~g~DIGGF~g~~~~~~~~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~i~lRy  509 (693)
T 2g3m_A          430 LVLGLSISGVPFVGCDIGGFQGRNFAEIDNSMDLLVKYYALALFFPFYRSHKATDGIDTEPVFLPDYYKEKVKEIVELRY  509 (693)
T ss_dssp             HHHHHHTTTCCSEECEETCSCCSSSSCCCCCHHHHHHHHHHTTTCSCEEECCCTTSCCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEECCCCCCCCCCCEECCHHHHHHHHHHHHHHH
T ss_conf             99999862998356777888787766789998999999987346522150359999887674528589999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEECCCCCEEEE
Q ss_conf             87799999999998639842223687898981111447525434970482023189435999749990652015850364
Q 002568          650 RLLPYFYTLMYEAHMKGTAVARPMFFSFPQDVKTYRIDTQFLIGKGVMVSPVLKSGAVSVDAYFPSGNWFDLFNYSNSVS  729 (906)
Q Consensus       650 ~LlPY~Yt~~~~a~~~G~Pi~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~  729 (906)
                      +||||+||++++||++|.||||||||+||+|++++++++|||+|++||||||+++| ++|+||||+|.|||+||++.+  
T Consensus       510 ~LlPYlYtl~~~a~~~G~Pi~RPL~~~fP~D~~~~~i~~Qfm~G~~lLVaPV~~~g-~~r~vYLP~g~W~d~~tg~~~--  586 (693)
T 2g3m_A          510 KFLPYIYSLALEASEKGHPVIRPLFYEFQDDDDMYRIEDEYMVGKYLLYAPIVSKE-ESRLVTLPRGKWYNYWNGEII--  586 (693)
T ss_dssp             HHHHHHHHHHHHHHHHCCCSEECHHHHCTTCGGGGGCCSCEEETTTEEECCCCSSS-SSCEEEECSSEEEETTTCCEE--
T ss_pred             HHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCHHHHCCCCEEECCCCEEEEEEECCC-CEEEEECCCCEEEECCCCCEE--
T ss_conf             87999999999998769963201103479986784569717607974998640179-679999799728988899899--


Q ss_pred             CCCCEEEEECCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEE
Q ss_conf             38994999548999212994379598602676431012488617999968998089999922895700134588099999
Q 002568          730 LNSGKQITLDAPPDHINVHVREGNILALQGEALTTKAARKTPFHLLVVVSSKETSTGEVFLDDGEEVEMGKEAGKWSFVR  809 (906)
Q Consensus       730 ~~gG~~v~~~apld~iPvfvR~GsIiP~q~~~~~t~~~~~~p~~L~v~~~~~g~A~g~ly~DDG~s~~~~~~~g~~~~~~  809 (906)
                       +||+++++.+   +||||||+|+|||++++            +|+|+++    |+|+||+||                 
T Consensus       587 -~Gg~~i~~~a---~iPvfvR~GsIiP~~~~------------~l~v~~~----~~~~ly~Dd-----------------  629 (693)
T 2g3m_A          587 -NGKSVVKSTH---ELPIYLREGSIIPLEGD------------ELIVYGE----TSFKRYDNA-----------------  629 (693)
T ss_dssp             -ESSEEEECCS---SSCEEEESSEEEEEGGG------------EEEEESS----EEEECTTSC-----------------
T ss_pred             -ECCEEEEEEE---EEEEEEECCEEEECCCC------------EEEEEEC----CEEEEEECC-----------------
T ss_conf             -7999999986---88799989979453789------------8999908----789999578-----------------


Q ss_pred             EEEEEECCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCEEEEEE
Q ss_conf             9999525759999966407545796329999999801556765436999899685430
Q 002568          810 FYSQMIKSNVNIRSEVLNGDFALGQKWIIDKVTFIGLEKFKRFKGYKLKTCTGRNLIK  867 (906)
Q Consensus       810 ~~~~~~~~~~~i~~~~~~g~y~~~~~~~~~~i~i~g~~~~~~~~~~~v~~ng~~~~~~  867 (906)
                       ++..++++++++     +.        ...+.++++...   .+.+|.+||+++...
T Consensus       630 -~~~~~~~~~~i~-----~~--------~~~~~~~~~~~~---~p~~v~vng~~~~~~  670 (693)
T 2g3m_A          630 -EITSSSNEIKFS-----RE--------IYVSKLTITSEK---PVSKIIVDDSKEIQV  670 (693)
T ss_dssp             -EEEECSSEEEES-----SC--------EEEEEEEEECSS---CCCEEEETTSCEEEC
T ss_pred             -EEEECCCEEEEE-----EE--------EEEEEEEECCCC---CCEEEEECCEEEEEE
T ss_conf             -268229989998-----61--------116899985889---946999999890226


No 8  
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=1.00  E-value=1  Score=1205.79  Aligned_cols=692  Identities=21%  Similarity=0.372  Sum_probs=583.1

Q ss_pred             EEEEEEEECCCCCEEEEEEEEC-CCCCCCCCCCEEEEEEEEEECCEEEEEEECCC-----CCCCCCCCCCCCCCCCCCCC
Q ss_conf             9968998368870899996303-78878888713899999981886999996499-----88433674357899877755
Q 002568           46 SVRSVAVDSSLKSLTAGLGLIR-SSSVYGPDIQSLNLFASFETKDRLRVRITDSK-----KQRWEIPQEIIPRQSYCTHC  119 (906)
Q Consensus        46 ~v~~~~~~~~~~~~~a~L~~~~-~~~~~g~di~~L~l~v~~~~~~~lrv~i~d~~-----~~r~evp~~~~~~~~~~~~~  119 (906)
                      ++.+++..  +..+++.+.... ......-+...+.|+|+..+++++||+|++..     .++|+++..    ... ...
T Consensus        21 ~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~i~~~~~~iiRv~~~~~~~~~~~~~~~~~~~~----~~~-~~~   93 (773)
T 2f2h_A           21 QVFEVEQQ--DNEMVVYAAPRDVRERTWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNIL----QDV-KVT   93 (773)
T ss_dssp             EEEEEEEE--TTEEEEEEESSCCSSGGGSSSSCCEEEEEECSSTTEEEEEEESCTTSCCCCCCCCCCCC----SCC-CEE
T ss_pred             EEEEEEEE--CCEEEEEEEEEEEECCCEECCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCEEECCC----CCC-CEE
T ss_conf             05899995--99999999646730573131467489999996699799999758887777896352477----788-618


Q ss_pred             CCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEE-CCCEEEEEECCCCCEEEECCCCCCCCCCEEEEE----CCEEEEE
Q ss_conf             45776689998788999961111699748999994-582999999159947860599998886213883----1269998
Q 002568          120 WLPENRLNSPVNHQTGPGNHFLSDPTSDLVFTLHT-TPFGFSVKRRSSGDILFDTSPETSHSDTFLVFK----DQYIQLS  194 (906)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~-~pf~~~v~r~~~~~vl~~t~~~~~~~~~~l~f~----d~~~~~s  194 (906)
                            +..        +...++..+.++++.|++ +||.++|.|  +|++|+++....    ...++.    ++|++++
T Consensus        94 ------~~~--------~~~~~~i~t~~l~v~i~~~~p~~i~~~~--~g~~l~~~~~~~----~~~~~~~~~~~~~~~~~  153 (773)
T 2f2h_A           94 ------IEN--------TERYAEFKSGNLSARVSKGEFWSLDFLR--NGERITGSQVKN----NGYVQDTNNQRNYMFER  153 (773)
T ss_dssp             ------EEE--------CSSEEEEEETTEEEEEECSSSCEEEEEE--TTEEEEEEETTS----EEEEEETTTTEEEEEEE
T ss_pred             ------EEE--------CCCEEEEEECCEEEEEECCCCEEEEEEE--CCEEEEEECCCC----CCEEECCCCCEEEEEEE
T ss_conf             ------996--------4998999979999999848982899998--997999715866----32157168870599999


Q ss_pred             EECCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEC-
Q ss_conf             4068765203421544567765699974997643667989887866510337875499996599999649981457619-
Q 002568          195 SALPIERSHLYGIGEHTKKSFKLTPNDTLTLWNADLASANVDVNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDVVYTG-  273 (906)
Q Consensus       195 ~~lp~~~~~~YGlGE~~~~~~~l~~g~~~~l~n~D~~~~~~~~~lYgs~Pf~l~~~~~~g~~~Gvf~~Ns~~~~v~~~~-  273 (906)
                      +.++ .+|++|||||+.++ |. ++|++++|||+|.+  ....++|++|||||+.+     .||||++|++.+++.++. 
T Consensus       154 ~~l~-~~e~~YGlGE~~~~-~~-~~g~~~~l~n~d~~--~~~~~lY~~iPf~~s~~-----g~Gvf~~n~~~~~~d~~~~  223 (773)
T 2f2h_A          154 LDLG-VGETVYGLGERFTA-LV-RNGQTVETWNRDGG--TSTEQAYKNIPFYMTNR-----GYGVLVNHPQCVSFEVGSE  223 (773)
T ss_dssp             EECC-TTCCEEEEEECCSC-SS-CTTEEEECCCCCCT--TSBSCCSEEEEEEEETT-----SEEEEECCSSCCEEEESSS
T ss_pred             EECC-CCCEEEECCCCCCC-CC-CCCCEEEEEECCCC--CCCCCCCCEEEEEEECC-----EEEEEEECCCCEEEEEEEC
T ss_conf             9738-99728978877786-03-39968887866888--88766732389999797-----8999995798549998412


Q ss_pred             --CEEEEEEECCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECC--CCCHHHHHHHHHHHHHCCCCCCEE
Q ss_conf             --8299999778699999828999899999999839999999875571012307--789889999999988829997379
Q 002568          274 --DRISYKVTGGIIDLYFFAGPSPDSVIQQYTELIGRPAPMPYWSFGFHQCRYG--YENVSDLKAVVAGYAKAGIPLEVM  349 (906)
Q Consensus       274 --~~~~~~~~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG~hqsr~g--y~~~~~v~~vv~~~~~~~IP~D~i  349 (906)
                        ..++|+++||.+|+|||.||+|++|+++|+++||+|+|||+|||||||||+.  ..+++++++++++|++++||||+|
T Consensus       224 ~~~~~~~~~~~~~ldyy~~~G~~p~~v~~~Y~~LtG~p~lpP~walG~w~s~~y~~~y~e~~v~~v~~~~r~~~IP~dvi  303 (773)
T 2f2h_A          224 KVSKVQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEATVNSFIDGMAERNLPLHVF  303 (773)
T ss_dssp             BTTEEEEEEESSEEEEEEEECSSHHHHHHHHHHHHCCCCCCCGGGGSEEEECCSSSCCCHHHHHHHHHHHHHTTCCCCEE
T ss_pred             CCCEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf             57549999826868999995999999999999873244568733358687302347899999999999998739984699


Q ss_pred             EEECCCCCCCC--CEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHCCEEEEEC-CCCEEEEE
Q ss_conf             98077889962--1155999999715999999999889989998289998889828889844268488409-95515667
Q 002568          350 WTDIDYMDGYK--DFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISVNETYGTFIRGLKADIFIKRD-GVPYLGEV  426 (906)
Q Consensus       350 w~Didy~~~~~--~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~~~~y~~y~~g~~~~~fik~~-g~~~~g~~  426 (906)
                      |+|++||++++  +||||+++||+|  ++|+++||++|+|+++|++|+|+.+  ++.|+++.++|+|||+. |+++.+.+
T Consensus       304 ~lD~~w~~~~~w~dft~d~~~FPdp--~~mv~~Lh~~G~k~~l~i~P~I~~~--s~~y~e~~~~g~~vk~~~G~~~~~~~  379 (773)
T 2f2h_A          304 HFDCFWMKAFQWCDFEWDPLTFPDP--EGMIRRLKAKGLKICVWINPYIGQK--SPVFKELQEKGYLLKRPDGSLWQWDK  379 (773)
T ss_dssp             EECGGGBCTTCCSSCCBCTTTCSCH--HHHHHHHHHTTCEEEEEECSEECTT--STTHHHHHHHTCBCBCTTSSBCCBSS
T ss_pred             EECCCCCCCCCCCCCEECHHHCCCH--HHHHHHHHHCCCEEEEEECCCCCCC--CHHHHHHHHCCCEEECCCCCEEEEEE
T ss_conf             9776534666666414773228998--9999999978998999846870788--78999998789266889998304111


Q ss_pred             CCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             28801135788988899999999987612797539953465456667999999999999744347887567777443454
Q 002568          427 WPGKVYYPDFVNPAAETFWKGEIQLFRDILPMDGLWLDMNELSNFITSLPTPHSTLDDPPYKINNNGVRRPINNKTVPAT  506 (906)
Q Consensus       427 WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps~f~~~~~~~~~~ld~ppy~~~~~g~~~~l~~~t~~~~  506 (906)
                      |||.+++|||+||+|++||.++++.+.+ +|+|++|+||||+.                                  |.+
T Consensus       380 w~g~~~~~DftnP~a~~ww~~~~~~l~d-~Gvd~~w~D~~e~~----------------------------------p~d  424 (773)
T 2f2h_A          380 WQPGLAIYDFTNPDACKWYADKLKGLVA-MGVDCFKTDFGERI----------------------------------PTD  424 (773)
T ss_dssp             SSTTBEEBCTTSHHHHHHHHHHHHHHHH-TTCCEEEECCCCCC----------------------------------CSS
T ss_pred             CCCCCEEECCCCHHHHHHHHHHHHHHHH-CCCCEEECCCCCCC----------------------------------CCC
T ss_conf             0798456689898999999999999986-59988975678988----------------------------------755


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             21136744322100013558999999999851-99987998453369898410017988467588974078885234647
Q 002568          507 ALHYRNLTEYNTHNLYGLLEAKATHAALINVN-GKRPFILSRSTFVGSGKYTAHWTGDNAATWNDLAYSIPSILNFGLFG  585 (906)
Q Consensus       507 ~~h~~~~~~~~~HNlYg~~~~~at~~~l~~~~-~~RpfilsRS~f~Gs~ry~~~W~GDn~s~W~~L~~sI~~~L~~~l~G  585 (906)
                      ..++++..++++||+|++++++++++++++.. ++|||+||||+|+|+|||+++|+|||.++|++|+.+|+++|++||+|
T Consensus       425 ~~~~~g~~~~~~hN~y~~~~~~a~~e~l~~~~~~~rp~ilsRS~~aGsqRy~~~WsGDn~s~W~~L~~si~~~L~~~lsG  504 (773)
T 2f2h_A          425 VQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSG  504 (773)
T ss_dssp             SBCTTCCCHHHHHHHHHHHHHHHHHHHHHTTTCGGGCCEEESCBCTTGGGSCCEECCCCCSSHHHHHHHHHHHHHHHTTT
T ss_pred             EEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             14448998788423667999999999999962898835886144676678860759977545999999999998633138


Q ss_pred             CCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             980630368999999677999997631235232026789997754577327-9999999999999877999999999986
Q 002568          586 IPMVGADICGFSGDTTEELCRRWIQLGAFYPFARDHSAIGTIRQELYFWDT-VAATARKVLGLRYRLLPYFYTLMYEAHM  664 (906)
Q Consensus       586 ip~~G~DIgGF~g~~~~EL~~RW~QlgaF~P~~R~H~~~~~~~qeP~~~~~-~~~~~r~~i~lRY~LlPY~Yt~~~~a~~  664 (906)
                      +||||+|||||.|++++|||+||+|+|+|+|+||+|+..  ..||||.|++ +.+++|+++++||+||||+||++++||.
T Consensus       505 ~p~~g~DIGGF~g~~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~ePw~~~~~~~~~~r~~i~lRy~LlPYlYtl~~~a~~  582 (773)
T 2f2h_A          505 FGFWSHDIGGFENTAPAHVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANA  582 (773)
T ss_dssp             CCCEEEETTCSSSCCCHHHHHHHHHHHHTSSEEEECCSS--SCCCGGGTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             862468768868989989999888764077756335698--885870415899999999999999999999999999986


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCEEEECCCCCEEEECCCCEEEEECCCCCC
Q ss_conf             39842223687898981111447525434970482023189435999749990652015850364389949995489992
Q 002568          665 KGTAVARPMFFSFPQDVKTYRIDTQFLIGKGVMVSPVLKSGAVSVDAYFPSGNWFDLFNYSNSVSLNSGKQITLDAPPDH  744 (906)
Q Consensus       665 ~G~Pi~RPL~~efP~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~Wyd~~t~~~~~~~~gG~~v~~~apld~  744 (906)
                      +|.||||||||+||+|++++++++|||||++||||||++++. +|+||||+|.|||+||++.+   +||+++++.+|+++
T Consensus       583 ~G~Pi~RPL~~~fP~D~~~~~i~~Qfm~G~~lLVaPV~~~~~-~~~vYLP~g~W~d~~tg~~~---~Gg~~i~~~~pl~~  658 (773)
T 2f2h_A          583 RGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAG-DVQFYLPEGRWTHLWHNDEL---DGSRWHKQQHGFLS  658 (773)
T ss_dssp             HCCCSEECHHHHSTTCGGGTTCCSCEEETTTEEECCCCSSSC-EEEEEECSSEEEETTTCCEE---ECSEEEEEECCTTC
T ss_pred             HCCCEECHHHCCCCCCHHHHCCCCCCCCCCCEEEEEECCCCC-EEEEECCCCEEEECCCCCEE---ECCEEEEEECCCCC
T ss_conf             599503131035789867845498430077669941014685-59999899848988999799---79989999788533


Q ss_pred             EEEEEECCEEEEECCCCCCCCCCCCCCEEEEEEECC-CCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEE
Q ss_conf             129943795986026764310124886179999689-9808999992289570013458809999999995257599999
Q 002568          745 INVHVREGNILALQGEALTTKAARKTPFHLLVVVSS-KETSTGEVFLDDGEEVEMGKEAGKWSFVRFYSQMIKSNVNIRS  823 (906)
Q Consensus       745 iPvfvR~GsIiP~q~~~~~t~~~~~~p~~L~v~~~~-~g~A~g~ly~DDG~s~~~~~~~g~~~~~~~~~~~~~~~~~i~~  823 (906)
                      ||||||+|+|||++++.+++.....++++|.|++.+ ++.|++.||+|||+|           .++|++..++++++|+.
T Consensus       659 iPvfvR~GsIiP~~~~~~~~~~~~~~~l~l~vy~~~~~~~~~~~ly~DdG~~-----------~~~~~~~~~~~~~~v~~  727 (773)
T 2f2h_A          659 LPVYVRDNTLLALGNNDQRPDYVWHEGTAFHLFNLQDGHEAVCEVPAADGSV-----------IFTLKAARTGNTITVTG  727 (773)
T ss_dssp             CCEEECSSEEEEECSCSSCSCSCTTBSCEEEEECCCTTCEEEEEEECTTSCE-----------EEEEEEEEETTEEEEEE
T ss_pred             CCEEEECCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCE-----------EEEEEEEEECCEEEEEE
T ss_conf             7679988928763561236665688866999997689987999999089968-----------99999999799999998


Q ss_pred             EEEECCC
Q ss_conf             6640754
Q 002568          824 EVLNGDF  830 (906)
Q Consensus       824 ~~~~g~y  830 (906)
                      ....+.|
T Consensus       728 ~~~~~~~  734 (773)
T 2f2h_A          728 AGEAKNW  734 (773)
T ss_dssp             EECCBSC
T ss_pred             CCCCCCE
T ss_conf             2357851


No 9  
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=1.00  E-value=1  Score=1204.64  Aligned_cols=715  Identities=22%  Similarity=0.361  Sum_probs=581.9

Q ss_pred             EEEEEEEEEECCEEEEEEECCCCCCCC-CCCCC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEE
Q ss_conf             389999998188699999649988433-67435--78998-777554577668999878899996111169974899999
Q 002568           78 SLNLFASFETKDRLRVRITDSKKQRWE-IPQEI--IPRQS-YCTHCWLPENRLNSPVNHQTGPGNHFLSDPTSDLVFTLH  153 (906)
Q Consensus        78 ~L~l~v~~~~~~~lrv~i~d~~~~r~e-vp~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~  153 (906)
                      ...+.|+..+++++||+.+....  +. .+.++  ++.+. ....        .     .+ .+...+...+..+.+.|+
T Consensus        65 ~~~~~i~~~~~~~iRv~~~~~~~--~~~~~~sl~~~~~~~~~~~~--------~-----v~-~~~~~~~~~t~~l~~~v~  128 (1020)
T 2xvl_A           65 VKKLRLQVMGERIIRVTALPGTD--FGIVPESIQVVAKPATNVPF--------S-----VD-QAGEKLVLKTSQVSAEVS  128 (1020)
T ss_dssp             CCEEEEEEEETTEEEEEEESSSC--GGGSCCCSSCCCCCCSSCCC--------E-----EE-EETTEEEEECSSEEEEEE
T ss_pred             CEEEEEEEECCCEEEEEEECCCC--CCCCCCCEEEECCCCCCCCE--------E-----EE-ECCCEEEEEECCEEEEEE
T ss_conf             63999999789979999846886--77788650563476678850--------8-----99-749989999498999998


Q ss_pred             ECCCEEEEEECCCCCEEEECCCCCCCCCCEEEE-----EC--CEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCEEEEE
Q ss_conf             458299999915994786059999888621388-----31--26999840687652034215445677656999749976
Q 002568          154 TTPFGFSVKRRSSGDILFDTSPETSHSDTFLVF-----KD--QYIQLSSALPIERSHLYGIGEHTKKSFKLTPNDTLTLW  226 (906)
Q Consensus       154 ~~pf~~~v~r~~~~~vl~~t~~~~~~~~~~l~f-----~d--~~~~~s~~lp~~~~~~YGlGE~~~~~~~l~~g~~~~l~  226 (906)
                      +.++.+.+++. +|++|+.+......  ..+..     .+  --+...+.++ .+|.||||||+... ....+|+.+.||
T Consensus       129 ~~~~~i~f~d~-~g~~ll~e~~~~~~--~~~~~~~r~~~~~~~~~~~~f~~~-~dE~~yGlGq~q~g-~ln~rG~~~~l~  203 (1020)
T 2xvl_A          129 LLDGTVSFRDA-KGNVLLQEENRGTF--SPVIHDPDPVDADSYALRQEFNRG-SDEGFFGLGQHQNG-QVNYAGENVELT  203 (1020)
T ss_dssp             TTTCCEEEEET-TSCEEEEBSSSCEE--ECCCSCSSCCCTTCEEEEEEECTT-CCCCEEEEEECSSC-CSSCTTSCEEEC
T ss_pred             CCCCEEEEEEC-CCCEEEEECCCCCC--CCCCCCCCCCCCCCEEEEEEEECC-CCCCEECCCCCCCC-CCCCCCCEEEEE
T ss_conf             88867999908-99896650456765--522122323688734999998079-99816878768777-565589888868


Q ss_pred             ECCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEE-----E-----------------------------
Q ss_conf             436679898878665103378754999965999996499814576-----1-----------------------------
Q 002568          227 NADLASANVDVNLYGSHPFYIDVRSPNGTTHGVLLLNSNGMDVVY-----T-----------------------------  272 (906)
Q Consensus       227 n~D~~~~~~~~~lYgs~Pf~l~~~~~~g~~~Gvf~~Ns~~~~v~~-----~-----------------------------  272 (906)
                      ++|         +|.++||+++.+     .||+||+|+....+..     .                             
T Consensus       204 ~~n---------~~~siPf~~s~~-----~YGilwdn~~~~~f~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~  269 (1020)
T 2xvl_A          204 TYN---------LVISIPFLVSSR-----NYGLLWDNNSITRFGDPREAQPLNQSLKLYDAEGKEGGLTVRYFVGDELKL  269 (1020)
T ss_dssp             CBT---------TBEEEEEEEESS-----SEEEEECCCSCEEESCCSCCEETTSSEEEECTTSCBTSEEEEEEETTEEEE
T ss_pred             ECC---------CCCCEEEEECCC-----CEEEEEECCCCEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCEEE
T ss_conf             668---------775161899278-----589999589745983574310222100101457874623678851786047


Q ss_pred             --------------------------------------------------------------------------------
Q ss_conf             --------------------------------------------------------------------------------
Q 002568          273 --------------------------------------------------------------------------------  272 (906)
Q Consensus       273 --------------------------------------------------------------------------------  272 (906)
                                                                                                      
T Consensus       270 ~r~~~~~~~~~~~~~~~~~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~w~~  349 (1020)
T 2xvl_A          270 TRVEADFNHQFYKQGNELENPFPEEVAGAYKNNTLRIELEGSIEAQATGKHQFKMYNSGYAQLSLDGEVVLDRWRMNWNP  349 (1020)
T ss_dssp             EEEESSCEECCEEETTEESSCCCTTTHHHHHTTCEEEEEEEEEEESSCEEEEEEEEESEEEEEEETTEEEEEEEECTTSC
T ss_pred             EEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCEEEEEECCEEHHHHHHHCCCC
T ss_conf             85011233334320322257644445666656540489999973278860899971366049988887612334312799


Q ss_pred             ----------------------------------------CCEEEEEE-ECCEEEEEEEECCCHHHHHHHHHHHHCCCCC
Q ss_conf             ----------------------------------------98299999-7786999998289998999999998399999
Q 002568          273 ----------------------------------------GDRISYKV-TGGIIDLYFFAGPSPDSVIQQYTELIGRPAP  311 (906)
Q Consensus       273 ----------------------------------------~~~~~~~~-~gG~lD~y~f~G~~p~~vi~qY~~ltG~p~l  311 (906)
                                                              .+.++|.+ .||.+|+|||.||+|++|+++|+++||+|+|
T Consensus       350 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~l~~~~p~~~~~~~~~~~~s~~gg~lDyy~~~G~tp~~Vv~~Yt~LTGrp~m  429 (1020)
T 2xvl_A          350 WYHNFYRELNAGDKHKLKVSWKPDGGFFHLRHLDPLPANEQHELSLASETGKAIDYYFVAGDTKDDIISGYRQLTGKSVM  429 (1020)
T ss_dssp             EEEEEEEEECTTCEEEEEEEEECTTCCEEEEEECCCCGGGSSSEEEEEEEESSEEEEEEECSSHHHHHHHHHHHHCCCCC
T ss_pred             CCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHCCCCC
T ss_conf             86302110113753789999715875355531576666678618999916997799999699999999999998688889


Q ss_pred             CCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCC--CCCCEEECCCCCCCHHHHHHHHHHHHCCCEEE
Q ss_conf             9987557101230778988999999998882999737998077889--96211559999997159999999998899899
Q 002568          312 MPYWSFGFHQCRYGYENVSDLKAVVAGYAKAGIPLEVMWTDIDYMD--GYKDFTLDPINFPVNSMQNFVNTLHQNGQRYV  389 (906)
Q Consensus       312 pP~WalG~hqsr~gy~~~~~v~~vv~~~~~~~IP~D~iw~Didy~~--~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v  389 (906)
                      ||+||||||||||+|.+++++++++++|++++||||+||+|++||+  ++++||||+++||+|  ++|+++||++|+|++
T Consensus       430 pP~WalG~wqsr~~Y~sq~ev~~va~~~re~gIPlDvi~lD~~y~~~~~~~dFtwD~~rFPdp--~~mv~~Lh~~G~k~v  507 (1020)
T 2xvl_A          430 LPKWAYGFWQSRERYKSSDEIIQNLKEYRDRKIPIDNIVLDWSYWPEDAWGSHDFDKQFFPDP--KALVDKVHAMNAQIM  507 (1020)
T ss_dssp             CCGGGGSEEECCTTCCSHHHHHHHHHHHHHTTCCCCEEEECSCCSCTTCTTSCCCCTTTCSCH--HHHHHHHHHTTCEEE
T ss_pred             CCCCEECEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEECHHHCCCH--HHHHHHHHHCCCEEE
T ss_conf             986441415531778999999999999998099844699955202657666448785567898--999999998899899


Q ss_pred             EEECCCCCCCCCHHHHHHHHHCCEEEEEC-CCCEEEEECCCE--ECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             98289998889828889844268488409-955156672880--113578898889999999998761279753995346
Q 002568          390 LILDPGISVNETYGTFIRGLKADIFIKRD-GVPYLGEVWPGK--VYYPDFVNPAAETFWKGEIQLFRDILPMDGLWLDMN  466 (906)
Q Consensus       390 ~~idP~I~~~~~y~~y~~g~~~~~fik~~-g~~~~g~~WpG~--~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~Dmn  466 (906)
                      +|++|+|..+  ++.|+++.+++++++.. +..+.+.+|||.  +++ ||+||++++||.+.+.+.+...|+||||+|||
T Consensus       508 l~V~P~I~~~--s~~Y~e~~~~G~~v~~~~~~~~~~w~wpG~~~~v~-DftNPear~~ww~~l~~~l~~~GiDg~W~Dmn  584 (1020)
T 2xvl_A          508 ISVWPKFYPT--TDNYKELNAKGFMFNRNLDEKNLDWIGKGYLNAFY-DPFSPEATAIFWKQIRDKINVHGFDAWWLDAV  584 (1020)
T ss_dssp             EEECSEECTT--SHHHHHHHHTTCEETHHHHTTCCCSSTTCCCCEEE-CTTSHHHHHHHHHHHHHHTGGGTCCEEEECCT
T ss_pred             EEECCCCCCC--CHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCEEE-CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf             9979854899--66689998689799747787445443799874150-89994999999999988763268858995588


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEE
Q ss_conf             54566679999999999997443478875677774434542113674432210001355899999999985-19998799
Q 002568          467 ELSNFITSLPTPHSTLDDPPYKINNNGVRRPINNKTVPATALHYRNLTEYNTHNLYGLLEAKATHAALINV-NGKRPFIL  545 (906)
Q Consensus       467 Eps~f~~~~~~~~~~ld~ppy~~~~~g~~~~l~~~t~~~~~~h~~~~~~~~~HNlYg~~~~~at~~~l~~~-~~~Rpfil  545 (906)
                      ||++|...         +.++.            +.++. ..|.+  .++++||+||+++++|+|+++++. +++|||+|
T Consensus       585 Eps~~~~~---------d~~~~------------~~l~~-~~~~G--~~~~vhNlY~~~~~~atye~l~~~~~~kRpfil  640 (1020)
T 2xvl_A          585 EPDIHSNL---------TFEKR------------KWLMT-PNARG--NGAEIFNAYAVPHAEGVYQGELATDGDKRSFIL  640 (1020)
T ss_dssp             TTCSSTTB---------CHHHH------------HHTTC-SBTTB--CGGGGTTCTHHHHHHHHHHHHHHHCTTSCCCEE
T ss_pred             CCCCCCCC---------CCCCC------------CCCCC-CCCCC--CHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             86556777---------85444------------24567-55678--566633235678899999999974579853899


Q ss_pred             ECCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC-------------------CCCC----
Q ss_conf             8453369898410-017988467588974078885234647980630368999-------------------9996----
Q 002568          546 SRSTFVGSGKYTA-HWTGDNAATWNDLAYSIPSILNFGLFGIPMVGADICGFS-------------------GDTT----  601 (906)
Q Consensus       546 sRS~f~Gs~ry~~-~W~GDn~s~W~~L~~sI~~~L~~~l~Gip~~G~DIgGF~-------------------g~~~----  601 (906)
                      |||+|+|+|||++ +|+|||.++|++|+.+|+++|++||+|+||||+|||||.                   |+++    
T Consensus       641 sRS~~aGsQRy~~~~WsGDn~ssW~~L~~sI~~~L~~glsGip~~g~DIGGF~~~~~y~~~~~~~~~~~~g~g~~d~~~~  720 (1020)
T 2xvl_A          641 TRSGFGGIQRTGSAIWSGDIVSRWSDMKDQIAAGIGTNLAGVTNWTFDIGGFTPEDRFRHGKKGFVGSWTALDAEQVDEW  720 (1020)
T ss_dssp             ESCCCTTGGGGTEEEECCSCBSSHHHHHHHHHHHHHHHHTTCCCEECCBTCSBCCHHHHEETTEECSSGGGSCGGGHHHH
T ss_pred             EECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             91666877767601657866752999999999999875308862304658775433444333333333345677778889


Q ss_pred             HHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             7799999763123523202678999775457732-7---99999999999998779999999999863984222368789
Q 002568          602 EELCRRWIQLGAFYPFARDHSAIGTIRQELYFWD-T---VAATARKVLGLRYRLLPYFYTLMYEAHMKGTAVARPMFFSF  677 (906)
Q Consensus       602 ~EL~~RW~QlgaF~P~~R~H~~~~~~~qeP~~~~-~---~~~~~r~~i~lRY~LlPY~Yt~~~~a~~~G~Pi~RPL~~ef  677 (906)
                      +|||+||+|+|||+|+||+|+..  .+||||.|+ +   +.+++|+++++||+||||+||+++++|.+|.||||||||+|
T Consensus       721 ~EL~~RW~Q~GaF~P~~R~H~~~--~~~EPW~f~~eg~~~~~~~r~~i~lRY~LlPYlYtl~~~a~~~G~Pi~RPL~~ef  798 (1020)
T 2xvl_A          721 QELNTRWYQFGAFVPLYRSHGQN--PYREIFNIADEGTEVYNAMVWYTKLRYYLMPYIYTLGGDTYHKDGTIMRGLVMDF  798 (1020)
T ss_dssp             HHHHHHHHHHHTTSSSEEECCSS--SCCSHHHHSCTTSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHTCCCSEECHHHHC
T ss_pred             HHHHHHHHHHHCCCHHHHHCCCC--CCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHCCC
T ss_conf             89999998874278877542588--8753133067657899999999999998899999999999975997210211137


Q ss_pred             CCCCCCCCCCCEEEECCCEEEEEEECCCCEEEEEECCCCE-EEECCCCCEEEECCCCEEEEECCCCCCEEEEEECCEEEE
Q ss_conf             8981111447525434970482023189435999749990-652015850364389949995489992129943795986
Q 002568          678 PQDVKTYRIDTQFLIGKGVMVSPVLKSGAVSVDAYFPSGN-WFDLFNYSNSVSLNSGKQITLDAPPDHINVHVREGNILA  756 (906)
Q Consensus       678 P~D~~~~~i~~Qfm~G~~LLVaPVl~~g~t~~~vYlP~G~-Wyd~~t~~~~~~~~gG~~v~~~apld~iPvfvR~GsIiP  756 (906)
                      |+|++++++++|||||++||||||+++|+++|+||||+|. |||+||++.+   +||+++++++|+++||||||+|+|||
T Consensus       799 P~D~~~~~i~dQfm~G~~LLVAPV~e~g~~~r~VYLP~G~~WyD~~Tg~~~---~GG~~i~v~apLd~iPvfvR~GsIIP  875 (1020)
T 2xvl_A          799 PNDRKAWDINTQYMFGPAFLVNPVYEYKARSRDVYLPAGSDWYNFYTGEKL---AGGQTITADAPLARVPLFVKAGAIVP  875 (1020)
T ss_dssp             TTCHHHHHCCSCEEETTTEEECCCCSTTCSEEEEEECTTSCEEETTTCCEE---CSSEEEEEECCTTCCCEEEETTCEEE
T ss_pred             CCCHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEECCCCCEE---ECCEEEEEECCCCCCCEEEECCCEEE
T ss_conf             898678445872005898699988237985699990799850776899498---79989999778554744865784743


Q ss_pred             ECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEECCEEEEEEEEEECCCCCCCCE
Q ss_conf             02676431012488617999968998089999922895700134588099999999952575999996640754579632
Q 002568          757 LQGEALTTKAARKTPFHLLVVVSSKETSTGEVFLDDGEEVEMGKEAGKWSFVRFYSQMIKSNVNIRSEVLNGDFALGQKW  836 (906)
Q Consensus       757 ~q~~~~~t~~~~~~p~~L~v~~~~~g~A~g~ly~DDG~s~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~g~y~~~~~~  836 (906)
                      ++++.+++.+.+.++++|+|+++.+  ++|+||+|||+|++|  ++|+|+.++|++.....  ++++...+|+|......
T Consensus       876 ~~~~~~~t~~~~~~~l~l~V~~~~~--~~~~LYeDDG~s~~y--e~g~y~~~~~~~~~~~~--~lti~~~~G~y~g~~~~  949 (1020)
T 2xvl_A          876 TGPLIQHVDEGLNSPLLITVYTGAN--GSFDIYEDDGRSLKY--QQGEWSRIPLSYDDVTG--TLIIGDRVGSFTGMADE  949 (1020)
T ss_dssp             ECCCCSSGGGGTTCCEEEEEECSSC--EEEEEEECCSSSSGG--GGTBEEEEEEEEETTTT--EEEECCCEEECTTCCSC
T ss_pred             ECCCCCCCCCCCCCCEEEEEECCCC--CEEEEEECCCCCCCC--CCCCEEEEEEEEECCCC--EEEEEECCCCCCCCCCC
T ss_conf             1687665533578754999970798--369999779972344--58858999999989845--89996357776677655


Q ss_pred             EEEEEEEEECCCCC-----CCCCEEEEECCEEEEEE
Q ss_conf             99999998015567-----65436999899685430
Q 002568          837 IIDKVTFIGLEKFK-----RFKGYKLKTCTGRNLIK  867 (906)
Q Consensus       837 ~~~~i~i~g~~~~~-----~~~~~~v~~ng~~~~~~  867 (906)
                      +..+|++++-....     ......|..+|+++...
T Consensus       950 r~~~v~~~~~~~~~~~~~~~~~~~~v~y~g~~~~v~  985 (1020)
T 2xvl_A          950 RNIRVRFIAGPTADATNFDKAAAEAVTYTGKSVSIK  985 (1020)
T ss_dssp             EEEEEEEECSCCTTTTCTTTSCCEEEEESSSCEEEE
T ss_pred             CEEEEEEECCCCCEEECCCCCCCCEEEECCEEEEEE
T ss_conf             179999978985234215677771599888589998


No 10 
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=1.00  E-value=1  Score=235.36  Aligned_cols=207  Identities=15%  Similarity=0.165  Sum_probs=170.4

Q ss_pred             CCEEEEEEECCCCEEEEEECCEEEEEEEC-C-------EEEE-EEEECCCHHHHHHHHHHHHCCCCCCCCCCCC--CCEE
Q ss_conf             96599999649981457619829999977-8-------6999-9982899989999999983999999987557--1012
Q 002568          254 GTTHGVLLLNSNGMDVVYTGDRISYKVTG-G-------IIDL-YFFAGPSPDSVIQQYTELIGRPAPMPYWSFG--FHQC  322 (906)
Q Consensus       254 g~~~Gvf~~Ns~~~~v~~~~~~~~~~~~g-G-------~lD~-y~f~G~~p~~vi~qY~~ltG~p~lpP~WalG--~hqs  322 (906)
                      +..+|++..+.....+..+...+.+.... |       .++. .++.|++|.+++++|++++|+++ ||+|+.+  +++|
T Consensus       122 ~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~v~~~y~~l~g~~~-~p~w~~~~P~gwn  200 (564)
T 1zy9_A          122 GKVYGFLSSKIAHPFFAVEDGELVAYLEYFDVEFDDFVPLEPLVVLEDPNTPLLLEKYAELVGMEN-NARVPKHTPTGWC  200 (564)
T ss_dssp             TEEEEESCCSSSEEEEEEETTEEEEEEECTTCCEEEEEECCCEEEEECSCHHHHHHHHHHHHHHHT-TCCCCSSCCEEEE
T ss_pred             CEEEEEEECCCCCCEEEEECCCEEEEEECCCCCCCCEEECCEEEEEECCCHHHHHHHHHHHHCCCC-CCCCCCCCCEEEC
T ss_conf             627999863776635897358379999627965354143130999958999999999999866268-9854568835771


Q ss_pred             ECCCC----CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf             30778----98899999999888299973799807788996211559999997159999999998899899982899988
Q 002568          323 RYGYE----NVSDLKAVVAGYAKAGIPLEVMWTDIDYMDGYKDFTLDPINFPVNSMQNFVNTLHQNGQRYVLILDPGISV  398 (906)
Q Consensus       323 r~gy~----~~~~v~~vv~~~~~~~IP~D~iw~Didy~~~~~~Ft~d~~~FP~~~l~~~v~~L~~~g~k~v~~idP~I~~  398 (906)
                      +|.+.    ++++++++++.++  ++|++.+++|++|+..+++|++|+++||+  ++.|++++|++|+|+.+|++|++..
T Consensus       201 sW~~~~~~~te~~v~~~ad~~~--~~G~~~~~IDdgW~~~~Gdw~~d~~kFP~--lk~lvd~lh~~Glk~Giw~~P~~v~  276 (564)
T 1zy9_A          201 SWYHYFLDLTWEETLKNLKLAK--NFPFEVFQIDDAYEKDIGDWLVTRGDFPS--VEEMAKVIAENGFIPGIWTAPFSVS  276 (564)
T ss_dssp             SHHHHGGGCCHHHHHHHHHHGG--GTTCSEEEECTTSEEETTEEEEECTTCCC--HHHHHHHHHHTTCEEEEEECTTEEE
T ss_pred             CHHCCCCCCCHHHHHHHHHHHH--HCCCCEEEECCCCCCCCCCCCCCCCCCCC--HHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf             5204275799999999999998--45982999886512225885538545899--8999999998799899996777568


Q ss_pred             CCCHHHHHHHHHCCEEEEECCCCE-EEEECCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             898288898442684884099551-56672880113578898889999999998761279753995346545
Q 002568          399 NETYGTFIRGLKADIFIKRDGVPY-LGEVWPGKVYYPDFVNPAAETFWKGEIQLFRDILPMDGLWLDMNELS  469 (906)
Q Consensus       399 ~~~y~~y~~g~~~~~fik~~g~~~-~g~~WpG~~~~pDf~np~a~~ww~~~~~~~~~~~g~dg~W~DmnEps  469 (906)
                      . +...|++  ..+++++.+|.+. .+.+|+|...++||+||++++||.+.++.+ ...|+|++|+|||++.
T Consensus       277 ~-~S~ly~~--~pdw~v~~~G~~~~~~~~W~~~~~~lD~t~P~a~~~~~~~~~~~-~~~GVD~iK~D~~~~~  344 (564)
T 1zy9_A          277 E-TSDVFNE--HPDWVVKENGEPKMAYRNWNKKIYALDLSKDEVLNWLFDLFSSL-RKMGYRYFKIDFLFAG  344 (564)
T ss_dssp             T-TCHHHHH--CGGGBCEETTEECEEEEETTEEEEEBCTTCHHHHHHHHHHHHHH-HHTTCCEEEECCGGGG
T ss_pred             C-CCHHHHH--CCCEEEECCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHH-HHCCCCEEEECCCCCC
T ss_conf             8-9866886--88869965995222001257863412899877999999999999-8649988998478876


Done!