Query 002577
Match_columns 906
No_of_seqs 346 out of 2131
Neff 7.9
Searched_HMMs 29240
Date Tue Mar 26 16:20:00 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002577.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1295-1299//hhsearch_pdb/002577hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 1.0 1 1 519.9 21.1 270 5-294 93-364 (369)
2 3b6u_A Kinesin-like protein KI 1.0 1 1 514.5 14.1 255 2-266 113-371 (372)
3 1x88_A Kinesin-like protein KI 1.0 1 1 514.4 14.4 235 15-256 123-359 (359)
4 2y65_A Kinesin, kinesin heavy 1.0 1 1 513.4 17.3 260 3-275 97-361 (365)
5 2wbe_C Bipolar kinesin KRP-130 1.0 1 1 511.7 14.6 237 13-258 133-372 (373)
6 2owm_A Nckin3-434, related to 1.0 1 1 511.4 20.7 256 2-265 148-431 (443)
7 3bfn_A Kinesin-like protein KI 1.0 1 1 509.4 16.6 245 5-261 112-361 (388)
8 2vvg_A Kinesin-2; motor protei 1.0 1 1 502.2 18.8 242 5-258 103-346 (350)
9 2zfi_A Kinesin-like protein KI 1.0 1 1 499.9 18.0 245 3-256 102-363 (366)
10 1t5c_A CENP-E protein, centrom 1.0 1 1 498.7 19.3 244 5-258 91-339 (349)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=1.00 E-value=1 Score=519.89 Aligned_cols=270 Identities=37% Similarity=0.550 Sum_probs=245.0
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHCC--CEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCE
Q ss_conf 888999889997818999999999986369--928999988777839532058887888544568999704775699975
Q 002577 5 ARKKNGEFPSDAGVIPRAVKQIFDILEAQH--AEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGKGGV 82 (906)
Q Consensus 5 ~~~~~g~~~~~~Giipr~~~~lf~~l~~~~--~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~~~~~ 82 (906)
++++..|.+.++|||||++.+||..+.... ..|.|++||+|||||.|+|||+|... .+..+.+++++.+++
T Consensus 93 KTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------~~~~l~i~e~~~~~~ 165 (369)
T 3cob_A 93 KTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQA-------KRLKLDIKKDSKGMV 165 (369)
T ss_dssp HHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSS-------CCCCCEEEECTTSCE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCC-------CCCCEEEEECCCCCE
T ss_conf 8375117998886258999999999874135752677899987707632345787556-------776427899799988
Q ss_pred EECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 87484788807998999999863004552212377888987216999999752388997324774201103668866667
Q 002577 83 FVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISR 162 (906)
Q Consensus 83 ~v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGsE~~~~ 162 (906)
+|.|++++.|.++++++.+|..|..+|++++|.+|..|||||+||+|+|....... .....|+|+|||||||||..+
T Consensus 166 ~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGSEr~~~ 242 (369)
T 3cob_A 166 SVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT---QAIARGKLSFVDLAGSERVKK 242 (369)
T ss_dssp EEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCSSCCCC
T ss_pred ECCCCEEEEECCHHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEEEEEEECCCC---CCEEEEEEEEEECCCCCCCCC
T ss_conf 80598799808999999999987525523034477877763389999999852787---727888999996887875443
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 78811348998876542788999999985099998788873200001246998404477612899898687898999998
Q 002577 163 SGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAH 242 (906)
Q Consensus 163 ~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~tL~fa~ 242 (906)
+++.|.|++|++.||+||++||+||.||+++..||||||||||+||+|+|||||+|+|||||||+..+++||++||+||.
T Consensus 243 t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~ 322 (369)
T 3cob_A 243 SGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYAS 322 (369)
T ss_dssp CSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 47630234778787788999999999986489967874777788788762898527999994772002899999999999
Q ss_pred HHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 8313836554330100777769999999999999999996269767800128
Q 002577 243 RAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYL 294 (906)
Q Consensus 243 rak~i~n~p~~n~~~~~~~~ik~l~~EI~~Lk~eL~~~r~kng~~~~~e~~~ 294 (906)
|||+|+|.|.+|... .+|.+|+.+|..++++.|.+.+.+.|.
T Consensus 323 rak~i~~~~~~n~~~----------~ei~~L~~~l~~~~~~~~~~~~~~~~~ 364 (369)
T 3cob_A 323 RVRSIVNDPSKNVSS----------KEVARLKKLVSYWKEQAGRKGDDEELE 364 (369)
T ss_dssp HHHTCBCCCCCCEEC----------HHHHHHHHHTTCC-----------CCB
T ss_pred HHHHCCCCCCCCCCH----------HHHHHHHHHHHHHHHHCCCCCCHHHHH
T ss_conf 986545677415788----------999999999999997647999867877
No 2
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=1.00 E-value=1 Score=514.52 Aligned_cols=255 Identities=45% Similarity=0.725 Sum_probs=231.0
Q ss_pred CCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHC-CCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 8898889998--8999781899999999998636-992899998877783953205888788854456899970477569
Q 002577 2 EGGARKKNGE--FPSDAGVIPRAVKQIFDILEAQ-HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (906)
Q Consensus 2 ~G~~~~~~g~--~~~~~Giipr~~~~lf~~l~~~-~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~ 78 (906)
+|+.++..|. .+..+|||||++.+||..+... +.+|.|+|||+|||||+|+|||++.. .+.+.+++++
T Consensus 113 SGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---------~~~l~i~e~~ 183 (372)
T 3b6u_A 113 TGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKDQ---------TKRLELKERP 183 (372)
T ss_dssp SSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTCSSCEEEEEEEEEEEETTEEEETTSSCT---------TCCBCEEEET
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCCC---------CCCCEEEECC
T ss_conf 9998757558998344881889999999986514577369999899996788899778977---------7773689879
Q ss_pred CCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 99758748478880799899999986300455221237788898721699999975238899732477420110366886
Q 002577 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSE 158 (906)
Q Consensus 79 ~~~~~v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGsE 158 (906)
.+|++|.|++++.|.++++++.+|..|..+|.+++|.||..|||||+||+|+|........+...++.|+|+||||||||
T Consensus 184 ~~~v~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSE 263 (372)
T 3b6u_A 184 DTGVYVKDLSSFVTKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSE 263 (372)
T ss_dssp TTEEEETTCCCEECCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEEECCCCC
T ss_pred CCCEECCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCC
T ss_conf 99675289889992679999999999997667254557787776429999999996047788762678899999798876
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
Q ss_conf 666778811348998876542788999999985099-9987888732000012469984044776128998986878989
Q 002577 159 NISRSGAREGRAREAGEINKSLLTLGRVINALVEHS-GHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLST 237 (906)
Q Consensus 159 ~~~~~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~~-~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~t 237 (906)
|..++++.|.|++|++.||+||++||+||.||+++. .||||||||||+||+|+|||||+|+||+||||+..+++||++|
T Consensus 264 r~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsT 343 (372)
T 3b6u_A 264 RQAKTGAQGERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTT 343 (372)
T ss_dssp E----------EEEGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH
T ss_conf 55445751543146756506499999999998638988786622088999998629995489999968852479999999
Q ss_pred HHHHHHHCCCCCCCCCCHHCCHHHHHHHH
Q ss_conf 99998831383655433010077776999
Q 002577 238 LDYAHRAKNIKNKPEINQKMMKSAMIKDL 266 (906)
Q Consensus 238 L~fa~rak~i~n~p~~n~~~~~~~~ik~l 266 (906)
|+||.|||+|+|+|.+|..+ +..++++|
T Consensus 344 LrfA~rak~I~n~~~~n~~~-~~~~~~~~ 371 (372)
T 3b6u_A 344 LRYANRAKNIKNKPRVNEDP-KDALLREF 371 (372)
T ss_dssp HHHHHHHTTCBCCCCCCC-----------
T ss_pred HHHHHHHHHCCCCCEECCCH-HHHHHHHC
T ss_conf 99999986455666255775-79999851
No 3
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=1.00 E-value=1 Score=514.43 Aligned_cols=235 Identities=64% Similarity=0.947 Sum_probs=221.4
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECC--CCCEEECCCEEEEE
Q ss_conf 9781899999999998636992899998877783953205888788854456899970477569--99758748478880
Q 002577 15 DAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG--KGGVFVRGLEEEIV 92 (906)
Q Consensus 15 ~~Giipr~~~~lf~~l~~~~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~--~~~~~v~~l~e~~v 92 (906)
.+|||||++.+||..+...+.+|.|+|||+|||||+|+|||+|... ....+.+++++ .+|++|.|++++.|
T Consensus 123 ~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-------~~~~l~i~~~~~~~~~v~v~gl~~~~v 195 (359)
T 1x88_A 123 LAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSD-------VSERLQMFDDPRNKRGVIIKGLEEITV 195 (359)
T ss_dssp TBCHHHHHHHHHHHHTSSSSEEEEEEEEEEEEETTEEEETTCTTSC-------TTCCBEEEEETTEEEEEEEETCCCEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEHHCCCCC-------CCCCCEEEECCCCCCCEEECCCEEEEC
T ss_conf 6870389999999877415825999999999957610012115655-------566605886557789889828789984
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 79989999998630045522123778889872169999997523889973247742011036688666677881134899
Q 002577 93 TTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRARE 172 (906)
Q Consensus 93 ~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGsE~~~~~~~~~~r~~E 172 (906)
.++++++.+|..|..+|.+++|.||..|||||+||+|+|........+....+.|+|+|||||||||+.++++.|.|++|
T Consensus 196 ~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E 275 (359)
T 1x88_A 196 HNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRARE 275 (359)
T ss_dssp CSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC-------------
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHH
T ss_conf 99999999999877514612254778777762899999987435578871377889999818998735435886320177
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 88765427889999999850999987888732000012469984044776128998986878989999988313836554
Q 002577 173 AGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNKPE 252 (906)
Q Consensus 173 ~~~iN~SL~~L~~vi~aL~~~~~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~tL~fa~rak~i~n~p~ 252 (906)
++.||+||++||+||.||+++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||.|||+|+|+|.
T Consensus 276 ~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~ 355 (359)
T 1x88_A 276 AGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPE 355 (359)
T ss_dssp --CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 76530789999999999864799776225668899999758997299999978974568999999999999865667661
Q ss_pred CCHH
Q ss_conf 3301
Q 002577 253 INQK 256 (906)
Q Consensus 253 ~n~~ 256 (906)
+|++
T Consensus 356 vn~~ 359 (359)
T 1x88_A 356 VNQK 359 (359)
T ss_dssp ----
T ss_pred ECCC
T ss_conf 4779
No 4
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=1.00 E-value=1 Score=513.39 Aligned_cols=260 Identities=38% Similarity=0.608 Sum_probs=234.6
Q ss_pred CCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHC--CCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 898889998--8999781899999999998636--992899998877783953205888788854456899970477569
Q 002577 3 GGARKKNGE--FPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (906)
Q Consensus 3 G~~~~~~g~--~~~~~Giipr~~~~lf~~l~~~--~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~ 78 (906)
|+.++..|. .+..+|||||++.+||..+... +.+|.|+|||+|||||+|+|||++. +..+.+++++
T Consensus 97 GKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~----------~~~l~i~e~~ 166 (365)
T 2y65_A 97 GKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS----------KVNLSVHEDK 166 (365)
T ss_dssp SHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTT----------CCSBCEEECS
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCC----------CCCCEEEECC
T ss_conf 996488668887555773779999999999833689539999999999877212622587----------6772378879
Q ss_pred CCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 99758748478880799899999986300455221237788898721699999975238899732477420110366886
Q 002577 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSE 158 (906)
Q Consensus 79 ~~~~~v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGsE 158 (906)
.++++|.|++++.|.|+++++.+|..|..+|++++|.+|..|||||+||+|+|.+..... .....|+|+||||||||
T Consensus 167 ~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~---~~~~~skL~lVDLAGSE 243 (365)
T 2y65_A 167 NRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLEN---QKKLSGKLYLVDLAGSE 243 (365)
T ss_dssp SSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTT---CCEEEEEEEEEECCCCC
T ss_pred CCCEEECCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCC---CCEEEEEEEEEECCCCC
T ss_conf 998784278899658799999999999864665235688878876399999999970588---87868999999799988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
Q ss_conf 66677881134899887654278899999998509-99987888732000012469984044776128998986878989
Q 002577 159 NISRSGAREGRAREAGEINKSLLTLGRVINALVEH-SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLST 237 (906)
Q Consensus 159 ~~~~~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~-~~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~t 237 (906)
|+.++++.|.|++|+++||+||++||+||.||+++ ..||||||||||+||+|+|||||+|+||+||||+..+++||++|
T Consensus 244 r~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~T 323 (365)
T 2y65_A 244 KVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKST 323 (365)
T ss_dssp C----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHH
T ss_pred CCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHH
T ss_conf 20121895224789988888899999899998527888786635788898776138996379999846752788999999
Q ss_pred HHHHHHHCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 99998831383655433010077776999999999999
Q 002577 238 LDYAHRAKNIKNKPEINQKMMKSAMIKDLYSEIDRLKQ 275 (906)
Q Consensus 238 L~fa~rak~i~n~p~~n~~~~~~~~ik~l~~EI~~Lk~ 275 (906)
|+||.|||+|+|+|.+|..+....+++.++.|+++++.
T Consensus 324 L~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~~~ 361 (365)
T 2y65_A 324 LDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNAR 361 (365)
T ss_dssp HHHHHHHTTCEEECCCEEECCSHHHHHC----------
T ss_pred HHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999972156754117889999999999999999998
No 5
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=1.00 E-value=1 Score=511.73 Aligned_cols=237 Identities=60% Similarity=0.943 Sum_probs=221.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEEC--CCCCEEECCCEEE
Q ss_conf 99978189999999999863699289999887778395320588878885445689997047756--9997587484788
Q 002577 13 PSDAGVIPRAVKQIFDILEAQHAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMED--GKGGVFVRGLEEE 90 (906)
Q Consensus 13 ~~~~Giipr~~~~lf~~l~~~~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~--~~~~~~v~~l~e~ 90 (906)
+.++|||||++.+||..+...+.+|.|+|||+|||||+|+|||++.. ...+.++++ +.++++|.|++++
T Consensus 133 ~~~~Giipr~~~~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---------~~~l~i~~~~~~~g~v~v~gl~~~ 203 (373)
T 2wbe_C 133 DSDIGIIPRALSHLFDELRMMEVEYTMRISYLELYNEELCDLLSTDD---------TTKIRIFDDSTKKGSVIIQGLEEI 203 (373)
T ss_dssp TTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEETTEEEESSCTTS---------CSCCCEEECSSSSSCEEETTCCCE
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCEEEECCCCCC---------CCCCEEEECCCCCCCEEECCCEEE
T ss_conf 67886769999999999872586299999999986776789778987---------777246741577895783686687
Q ss_pred EECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCC-HHH
Q ss_conf 8079989999998630045522123778889872169999997523889973247742011036688666677881-134
Q 002577 91 IVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAR-EGR 169 (906)
Q Consensus 91 ~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGsE~~~~~~~~-~~r 169 (906)
.|.++++++.+|..|..+|++++|.||..|||||+||+|+|........+....+.|+|+|||||||||+.++++. |.|
T Consensus 204 ~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~r 283 (373)
T 2wbe_C 204 PVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIR 283 (373)
T ss_dssp EESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC-------------
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 06999999999999863304311438888888618999999996578888742558999999799887463236765631
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 89988765427889999999850999987888732000012469984044776128998986878989999988313836
Q 002577 170 AREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKN 249 (906)
Q Consensus 170 ~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~tL~fa~rak~i~n 249 (906)
++|+..||+||++||+||.||+++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||.|||+|+|
T Consensus 284 l~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n 363 (373)
T 2wbe_C 284 VRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQN 363 (373)
T ss_dssp -------CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 46788888889999999999971799576216568899998738996099999969973458999999999999865666
Q ss_pred CCCCCHHCC
Q ss_conf 554330100
Q 002577 250 KPEINQKMM 258 (906)
Q Consensus 250 ~p~~n~~~~ 258 (906)
+|.+|+...
T Consensus 364 ~p~vN~~~s 372 (373)
T 2wbe_C 364 KPEVNQKLT 372 (373)
T ss_dssp CCCCCEECC
T ss_pred CCEECCCCC
T ss_conf 543333157
No 6
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=1.00 E-value=1 Score=511.40 Aligned_cols=256 Identities=40% Similarity=0.592 Sum_probs=223.2
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-----CCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 88988899988999781899999999998636-----9928999988777839532058887888544568999704775
Q 002577 2 EGGARKKNGEFPSDAGVIPRAVKQIFDILEAQ-----HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALME 76 (906)
Q Consensus 2 ~G~~~~~~g~~~~~~Giipr~~~~lf~~l~~~-----~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~ 76 (906)
+|+.++..| .+.++|||||++.+||..+... +..|.|+|||+|||||.|+|||+|... ...+..+.+++
T Consensus 148 SGKTyTM~G-~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~-----~~~~~~l~ire 221 (443)
T 2owm_A 148 SGKSYTMMG-TPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVP-----NKPPYYLKVRE 221 (443)
T ss_dssp SSHHHHHTC-CTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCS-----SCCCCCCEEEE
T ss_pred CCCCEEEEC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEECCCCCCC-----CCCCCCCCEEE
T ss_conf 999888646-877775379999999998876521367734999999999988975685676345-----78653443037
Q ss_pred CCCCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEECCCCCC
Q ss_conf 69997587484788807998999999863004552212377888987216999999752388-99732477420110366
Q 002577 77 DGKGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTP-EGEEMIKCGKLNLVDLA 155 (906)
Q Consensus 77 ~~~~~~~v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~-~~~~~~~~skl~lVDLA 155 (906)
++.+|++|.||+++.|.++++++.+|..|..+|.+++|.||..|||||+||+|+|.+..... .+....+.|+|+|||||
T Consensus 222 ~~~~g~~V~gl~e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLA 301 (443)
T 2owm_A 222 SPTEGPYVKDLTEVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLA 301 (443)
T ss_dssp ETTTEEEEETCCCEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECC
T ss_pred CCCCCEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEEEEEEEECC
T ss_conf 79999952687799828999999999999733786337587766777199999999860356788740688779999798
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC----------------------CCCCCCCCCCCCCCCCCCC
Q ss_conf 886666778811348998876542788999999985099----------------------9987888732000012469
Q 002577 156 GSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHS----------------------GHVPYRDSKLTRLLRDSLG 213 (906)
Q Consensus 156 GsE~~~~~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~~----------------------~~ipyr~SkLT~lL~dsLg 213 (906)
||||+.++++.|.|++|+++||+||++||+||.||+++. .||||||||||+||+|+||
T Consensus 302 GSER~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLg 381 (443)
T 2owm_A 302 GSERAKSTEATGQRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLG 381 (443)
T ss_dssp CCCC--------------CCSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTT
T ss_pred CCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 87535656776641211001057899999999998604555554443222343334456777455745476888888627
Q ss_pred CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHHH
Q ss_conf 9840447761289989868789899999883138365543301007777699
Q 002577 214 GKTKTCIIATVSPSIHCLEETLSTLDYAHRAKNIKNKPEINQKMMKSAMIKD 265 (906)
Q Consensus 214 g~~~t~lI~~isp~~~~~~eTl~tL~fa~rak~i~n~p~~n~~~~~~~~ik~ 265 (906)
|||+|+||+||||+ +++||++||+||.|||+|+|+|++|.....+..+++
T Consensus 382 GnskT~mIa~iSP~--~~~ETlsTLrfA~rak~I~n~~~vN~~d~~~~~~~~ 431 (443)
T 2owm_A 382 GNSKTAMIACISPT--DYDETLSTLRYADQAKRIRTRAVVNQVDGVSAAERD 431 (443)
T ss_dssp SSCEEEEEEEECSS--CHHHHHHHHHHHHHHTTCEECCCCCCC---------
T ss_pred CCCCEEEEEEECCC--CHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHH
T ss_conf 99708999981643--078999999999998544563335135776678889
No 7
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=1.00 E-value=1 Score=509.45 Aligned_cols=245 Identities=35% Similarity=0.568 Sum_probs=223.6
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHC-----CCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 88899988999781899999999998636-----9928999988777839532058887888544568999704775699
Q 002577 5 ARKKNGEFPSDAGVIPRAVKQIFDILEAQ-----HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGK 79 (906)
Q Consensus 5 ~~~~~g~~~~~~Giipr~~~~lf~~l~~~-----~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~~ 79 (906)
++++..|.+.++|||||++.+||..+... ...|.|+|||+|||||+|+|||+|.. ..+.+++|+.
T Consensus 112 KTyTM~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~----------~~l~ired~~ 181 (388)
T 3bfn_A 112 KTHTMLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPAS----------GDLVIREDCR 181 (388)
T ss_dssp HHHHHTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSS----------CBCCCEECTT
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCEEEEHHCCCC----------CCCEEEECCC
T ss_conf 976865675566416899999999998742337771489999999998886456001678----------8845998699
Q ss_pred CCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 97587484788807998999999863004552212377888987216999999752388997324774201103668866
Q 002577 80 GGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSEN 159 (906)
Q Consensus 80 ~~~~v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGsE~ 159 (906)
++++|.|++++.|.++++++.+|..|..+|.+++|.||..|||||+||+|+|.+....... ..+.|+|+|||||||||
T Consensus 182 ~~v~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~--~~~~skL~lVDLAGSEr 259 (388)
T 3bfn_A 182 GNILIPGLSQKPISSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPF--RQREGKLYLIDLAGSED 259 (388)
T ss_dssp SCEECTTCCCEECCSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTC--CEEEEEEEEEECCCTTC
T ss_pred CCEEECCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCC--CEEEEEEEEEECCCCCC
T ss_conf 9988536059995899999999999750265223647787777739999999982268887--33688999998987766
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 66778811348998876542788999999985099998788873200001246998404477612899898687898999
Q 002577 160 ISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (906)
Q Consensus 160 ~~~~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~tL~ 239 (906)
..++++.|.|++|++.||+||++||+||.||.++..||||||||||+||||+|||||+|+||+||||+..+++||++||+
T Consensus 260 ~~~t~~~g~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLr 339 (388)
T 3bfn_A 260 NRRTGNKGLRLKESGAINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALN 339 (388)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHH
T ss_conf 55456755114777675063999999999996699988675658899999860899628999997985000899999999
Q ss_pred HHHHHCCCCCCCCCCHHCCHHH
Q ss_conf 9988313836554330100777
Q 002577 240 YAHRAKNIKNKPEINQKMMKSA 261 (906)
Q Consensus 240 fa~rak~i~n~p~~n~~~~~~~ 261 (906)
||.|||+|+|+|.+|..+....
T Consensus 340 fA~rak~I~n~p~~n~~~~~~~ 361 (388)
T 3bfn_A 340 FAARSKEVINRPFTNESLQPHA 361 (388)
T ss_dssp HHCSEEEEC-------------
T ss_pred HHHHHHHCCCCCCCCCCCCHHH
T ss_conf 9999851757673567899899
No 8
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=1.00 E-value=1 Score=502.20 Aligned_cols=242 Identities=48% Similarity=0.699 Sum_probs=223.6
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHC--CCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCE
Q ss_conf 88899988999781899999999998636--9928999988777839532058887888544568999704775699975
Q 002577 5 ARKKNGEFPSDAGVIPRAVKQIFDILEAQ--HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGKGGV 82 (906)
Q Consensus 5 ~~~~~g~~~~~~Giipr~~~~lf~~l~~~--~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~~~~~ 82 (906)
++++..|.+.++|||||++.+||..+... +..|.|++||+|||||+|+|||++ +.++.+++++.+|+
T Consensus 103 KTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~-----------~~~l~i~e~~~~~~ 171 (350)
T 2vvg_A 103 KTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKN-----------NTKLPLKEDKTRGI 171 (350)
T ss_dssp HHHHHTBCSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTT-----------EEEECEEEETTTEE
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCC-----------CCCCEEEECCCCCE
T ss_conf 9878535876675588999999999986536875799999999928788885567-----------76842567489988
Q ss_pred EECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 87484788807998999999863004552212377888987216999999752388997324774201103668866667
Q 002577 83 FVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISR 162 (906)
Q Consensus 83 ~v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGsE~~~~ 162 (906)
+|.|++++.|.++++++.+|..|..+|++++|.+|..|||||+||+|+|...... .+...++.|+|+|||||||||..+
T Consensus 172 ~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-~~~~~~~~skl~lVDLAGSEr~~~ 250 (350)
T 2vvg_A 172 YVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVI-ENKEVIRVGKLNLVDLAGSERQSK 250 (350)
T ss_dssp EETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC-----CEEEEEEEEEEECCCCCC---
T ss_pred EECCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECC-CCCCCEEEEEEEEEECCCCCCCCC
T ss_conf 8158779974999999999999984146001457888876529999999995046-787617889999996898875544
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 78811348998876542788999999985099998788873200001246998404477612899898687898999998
Q 002577 163 SGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLDYAH 242 (906)
Q Consensus 163 ~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~tL~fa~ 242 (906)
+++.|.|++|++.||+||++||+||.||+++..||||||||||+||||+|||||+|+||+||||+..+++||++||+||.
T Consensus 251 t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~ 330 (350)
T 2vvg_A 251 TGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYAD 330 (350)
T ss_dssp ------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 56507788999887589999999999997389988764558889989860899628999996884001899999999999
Q ss_pred HHCCCCCCCCCCHHCC
Q ss_conf 8313836554330100
Q 002577 243 RAKNIKNKPEINQKMM 258 (906)
Q Consensus 243 rak~i~n~p~~n~~~~ 258 (906)
|||+|+|+|.+|..+.
T Consensus 331 rak~i~n~~~~n~~~~ 346 (350)
T 2vvg_A 331 RAKQIKNKPRINEDPK 346 (350)
T ss_dssp HHTTCBCCCCCCBSCT
T ss_pred HHHHCCCCCEECCCCH
T ss_conf 9854456661257820
No 9
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=1.00 E-value=1 Score=499.86 Aligned_cols=245 Identities=39% Similarity=0.616 Sum_probs=221.0
Q ss_pred CCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHC---CCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECC
Q ss_conf 8988899988-999781899999999998636---992899998877783953205888788854456899970477569
Q 002577 3 GGARKKNGEF-PSDAGVIPRAVKQIFDILEAQ---HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDG 78 (906)
Q Consensus 3 G~~~~~~g~~-~~~~Giipr~~~~lf~~l~~~---~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~ 78 (906)
|+.++..|.. +.++|||||++.+||..+... +..|.|+|||+|||||+|+|||+|.. +..+.+++++
T Consensus 102 GKTyTm~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~---------~~~l~ire~~ 172 (366)
T 2zfi_A 102 GKSYTMMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKN---------KGNLRVREHP 172 (366)
T ss_dssp SHHHHHTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTT---------CSCBCEEEET
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEECCCCCC---------CCCCEEEECC
T ss_conf 8845864787657786699999999998764026770699999999960884789123556---------7885688869
Q ss_pred CCCEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEECCCCCCCC
Q ss_conf 9975874847888079989999998630045522123778889872169999997523889-973247742011036688
Q 002577 79 KGGVFVRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPE-GEEMIKCGKLNLVDLAGS 157 (906)
Q Consensus 79 ~~~~~v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~-~~~~~~~skl~lVDLAGs 157 (906)
.+|++|.|++++.|.++++++.+|..|..+|.+++|.||..|||||+||+|+|.+...... +....+.|+|+|||||||
T Consensus 173 ~~g~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGS 252 (366)
T 2zfi_A 173 LLGPYVEDLSKLAVTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGS 252 (366)
T ss_dssp TTEEEETTCCCEECCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCG
T ss_pred CCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEECCCC
T ss_conf 99879769899997799999999999762246112657777776459999999996046778754136768999968988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC------------CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 666677881134899887654278899999998509------------99987888732000012469984044776128
Q 002577 158 ENISRSGAREGRAREAGEINKSLLTLGRVINALVEH------------SGHVPYRDSKLTRLLRDSLGGKTKTCIIATVS 225 (906)
Q Consensus 158 E~~~~~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~------------~~~ipyr~SkLT~lL~dsLgg~~~t~lI~~is 225 (906)
||+.++++.|.|++|++.||+||++||+||.||++. ..||||||||||+||+|+|||||+|+||+|||
T Consensus 253 Er~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~is 332 (366)
T 2zfi_A 253 ERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALS 332 (366)
T ss_dssp GGC------CCCHHHHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEEC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEC
T ss_conf 64554678763004465676789999999999871234543333456677464333288999998728996099999968
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHH
Q ss_conf 9989868789899999883138365543301
Q 002577 226 PSIHCLEETLSTLDYAHRAKNIKNKPEINQK 256 (906)
Q Consensus 226 p~~~~~~eTl~tL~fa~rak~i~n~p~~n~~ 256 (906)
|+..+++||++||+||.|||+|+|+|.++..
T Consensus 333 P~~~~~~ETlsTLrfA~rak~I~~~~~~~~~ 363 (366)
T 2zfi_A 333 PADINYDETLSTLRYADRAKQIRNTVSVNHH 363 (366)
T ss_dssp CBGGGHHHHHHHHHHHHHTC-----------
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 8733499999999999998405588889997
No 10
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=1.00 E-value=1 Score=498.71 Aligned_cols=244 Identities=41% Similarity=0.638 Sum_probs=221.8
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCEEEEEEEEEEEECCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEE
Q ss_conf 88899988999781899999999998636-99289999887778395320588878885445689997047756999758
Q 002577 5 ARKKNGEFPSDAGVIPRAVKQIFDILEAQ-HAEYSMKVTFLELYNEEISDLLALEETSKFVDDKSKKPIALMEDGKGGVF 83 (906)
Q Consensus 5 ~~~~~g~~~~~~Giipr~~~~lf~~l~~~-~~~~~v~~S~~Eiyne~v~DLL~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 83 (906)
++++..|.+.++|||||++.+||..+... +.+|.|+|||+|||||+|+|||++.. ..+++.+++|+.++++
T Consensus 91 KTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------~~~~l~i~ed~~~~~~ 162 (349)
T 1t5c_A 91 KTYTMMGSEDHLGVIPRAIHDIFQKIKKFPDREFLLRVSYMEIYNETITDLLCGTQ--------KMKPLIIREDVNRNVY 162 (349)
T ss_dssp HHHHHTBCSSSBCHHHHHHHHHHHHGGGCTTEEEEEEEEEEEEETTEEEESSSSSC--------TTCCEEEEETTTTEEE
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCEEEECCCCCC--------CCCCCEEEECCCCCEE
T ss_conf 87687468888745889999999999747688679998899984877788667877--------7877469988999987
Q ss_pred ECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCC--CCCEEEEEECCCCCCCCCCCC
Q ss_conf 748478880799899999986300455221237788898721699999975238899--732477420110366886666
Q 002577 84 VRGLEEEIVTTADEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEG--EEMIKCGKLNLVDLAGSENIS 161 (906)
Q Consensus 84 v~~l~e~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~ssRSH~if~i~v~~~~~~~~~--~~~~~~skl~lVDLAGsE~~~ 161 (906)
|.|++++.|.++++++.+|..|..+|.+++|.||..|||||+||+|+|......... ....+.|+|+|||||||||..
T Consensus 163 v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~ 242 (349)
T 1t5c_A 163 VADLTEEVVYTSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAA 242 (349)
T ss_dssp ETTCCCEECSSHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC
T ss_pred ECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCCCC
T ss_conf 44887998689999999999752334523365778888763999999998516887676763789999999799875322
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
Q ss_conf 778811348998876542788999999985099--998788873200001246998404477612899898687898999
Q 002577 162 RSGAREGRAREAGEINKSLLTLGRVINALVEHS--GHVPYRDSKLTRLLRDSLGGKTKTCIIATVSPSIHCLEETLSTLD 239 (906)
Q Consensus 162 ~~~~~~~r~~E~~~iN~SL~~L~~vi~aL~~~~--~~ipyr~SkLT~lL~dsLgg~~~t~lI~~isp~~~~~~eTl~tL~ 239 (906)
++++.|.|++|++.||+||++||+||.+|+++. .||||||||||+||||+|||||+|+|||||||+ +++||++||+
T Consensus 243 ~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~ 320 (349)
T 1t5c_A 243 QTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQ 320 (349)
T ss_dssp -------CCCSSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCC--CHHHHHHHHH
T ss_conf 14786411133547768999999999998556877777655637789999861899629999994777--7899999999
Q ss_pred HHHHHCCCCCCCCCCHHCC
Q ss_conf 9988313836554330100
Q 002577 240 YAHRAKNIKNKPEINQKMM 258 (906)
Q Consensus 240 fa~rak~i~n~p~~n~~~~ 258 (906)
||.|||+|+|+|.+|..+.
T Consensus 321 fA~rak~I~n~~~vn~~~~ 339 (349)
T 1t5c_A 321 FASTAKYMKNTPYVNEVST 339 (349)
T ss_dssp HHHHHTTCCCCCCCCEEC-
T ss_pred HHHHHHHCCCCCEECCCCC
T ss_conf 9999745366765366788
Done!