BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002578
(906 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WKV8|ULP2A_ARATH Probable ubiquitin-like-specific protease 2A OS=Arabidopsis
thaliana GN=ULP2A PE=2 SV=2
Length = 774
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 287/714 (40%), Positives = 408/714 (57%), Gaps = 88/714 (12%)
Query: 5 SSKKKYKVFEFSEEDELVEKTAKKMLGKYSNPRKNQRHSSPIDKYKFLQFFSQGTKPQQK 64
S +K VF++S+ED+ VE+ +KK+L K+ +P ++H IDKY+FL+ F++ T+ + K
Sbjct: 10 SKRKPIDVFDYSDEDDRVEEESKKLLRKFDSP-VTKKHHCAIDKYEFLRCFAKDTQSESK 68
Query: 65 KIISEIVDVDAGVTQGAEFEDVGISQEPIGID-DGDAMSIQREDGAFREVALLDNFSLSS 123
+ ++DV+ V + +EP + GD S L+D S S
Sbjct: 69 VLQHIVIDVE-----------VPVKEEPSRCELSGDGNS-----------DLIDVISNGS 106
Query: 124 SKNYGNEQVGLISDSDDDDCMEMSSPATSSSPLSVNGVLLEEQVAECGSCGHQSDMENKM 183
+ G + + S S++D+ + +S P H+ D EN
Sbjct: 107 HRRIGIDSLTSSSLSENDEVSTGEATNPASDP-------------------HEVDPENAQ 147
Query: 184 VVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGS 243
V++ PD I++GD T S++TFS + + VESS +N TKGTFS +W I D+I I++ WC
Sbjct: 148 VLIIPDVIIYGDIYCTNSKLTFSRNCMNVESSSVNATKGTFSCQWTIEDIIKIESQWCLE 207
Query: 244 VGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNTV 303
V TA V ++LKS+ GV +I G DLL+FSV D W + + I SLD RYK W
Sbjct: 208 VETAFVNVLLKSRKPEGVDIAKDISGIDLLKFSVYDPKWSKEVETIRSLDSRYKNIW--- 264
Query: 304 DFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTFI 363
FD+ E + L + ++ + FED+VYP+ +PDAV++ ++D++LL+P FI
Sbjct: 265 -FDTITESEEIAFSGHDLGTSLTNLA--DSFEDLVYPQGEPDAVVVRKQDIELLKPRRFI 321
Query: 364 NDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTR 423
NDTIIDFYIKYL N+I + FHFFN FFFRKLA+LDK S C GR A+QRV+KWT+
Sbjct: 322 NDTIIDFYIKYLKNRISPKERGRFHFFNCFFFRKLANLDKGTPSTCGGREAYQRVQKWTK 381
Query: 424 KVNLFEKDYIFIPVNYSLHWSLIVICHPGE-VPYFRDDEIEKSLKVPCILHMDSIKGSHR 482
V+LFEKDYIFIP+N S HWSL++ICHPGE VP +E +VPCILH+DSIKGSH+
Sbjct: 382 NVDLFEKDYIFIPINCSFHWSLVIICHPGELVP----SHVENPQRVPCILHLDSIKGSHK 437
Query: 483 -GLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELF 541
GL N+ YL EEWK RH NT ++ S+ +Q LELPQQ+NSFDCGLFLLHY++LF
Sbjct: 438 GGLINIFPSYLREEWKARHENTTND-SSRAPNMQSISLELPQQENSFDCGLFLLHYLDLF 496
Query: 542 LKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHSRRKDPS---AD 598
+ +A + FNP + +NFL RNWFP E S+KR I +LLY + K H DPS A+
Sbjct: 497 VAQAPAKFNPSLISRSANFLTRNWFPAKEASLKRRNILELLYNLHKGH----DPSILPAN 552
Query: 599 SVDEHPSSQPTNDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISISGASPQRD 658
S E P +N + +ET + + + N P S+++D + S
Sbjct: 553 SKSEPPHCGVSN-RNDQETESENVIECCNWIKPFDGSSSTVTDISQTKTCS--------- 602
Query: 659 AQCTRDPEFSFKEQCKLGTGPASLSDLRYQHVTSRLRRSIMSPI-EEAKETDEQ 711
P+ ++ G Y +S+LR+ MSPI EE +E+ E+
Sbjct: 603 ------PDLILSKEVSYSGG--------YDPPSSKLRKVFMSPIVEEVQESCEK 642
>sp|Q8L7S0|ULP2B_ARATH Probable ubiquitin-like-specific protease 2B OS=Arabidopsis
thaliana GN=ULP2B PE=2 SV=3
Length = 931
Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust.
Identities = 241/482 (50%), Positives = 321/482 (66%), Gaps = 20/482 (4%)
Query: 184 VVVFPDFIVHGDNNYTESRVTFSCSFVTVESSVINGTKGTFSFEWAIGDVINIQTGWCGS 243
V++ ++++ D + S V FSC+ + ++S + N + FS E+ + D+++IQ W +
Sbjct: 242 VIMTSEYVILKDMHCAASLVIFSCNGIKIKSFLANNEEVPFSCEFGVEDIVSIQYNWYQN 301
Query: 244 VGTAIVALILKSKDSTGVRNQNEIPGSDLLRFSVCDQHWPERLNKIISLDVRYKERWNT- 302
VG I+ + + KD + E L+ +V + +WP + KI SL V+Y WNT
Sbjct: 302 VGLIILRIRVLLKDENCHEDMEE------LKIAVKEHNWPNKQQKINSLHVKYPAVWNTD 355
Query: 303 VDFDSKYEENSLLSQKSRLPSKCCSIEFDEPFEDVVYPKDDPDAVLISERDVKLLEPDTF 362
++ D + +L QK PS FDEPFEDVVYPK DPDAV I +RDV+LL+P+TF
Sbjct: 356 LEDDVEVSGYNLNQQKRYFPS------FDEPFEDVVYPKGDPDAVSICKRDVELLQPETF 409
Query: 363 INDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWT 422
+NDTIIDFYI YL N+IQT+ + FHFFNSFFFRKLADLDKDPSS +G+AAF RVRKWT
Sbjct: 410 VNDTIIDFYINYLKNQIQTEEKHRFHFFNSFFFRKLADLDKDPSSIADGKAAFLRVRKWT 469
Query: 423 RKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHR 482
RKV++F KDYIF+PVNY+LHWSLIVICHPGEV D +++ S KVPCILHMDSIKGSH
Sbjct: 470 RKVDMFGKDYIFVPVNYNLHWSLIVICHPGEVANRTDLDLDDSKKVPCILHMDSIKGSHA 529
Query: 483 GLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFL 542
GLKNL+Q YL EEWKERH T D++ S+F+ L+F LELPQQ+NSFDCGLFLLHY+ELFL
Sbjct: 530 GLKNLVQTYLCEEWKERHKETSDDISSRFMNLRFVSLELPQQENSFDCGLFLLHYLELFL 589
Query: 543 KEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHSRRKDPSADSVDE 602
EA NF+P K SNFL NWFPPAE S+KR I+KL++E+ ++ SR + E
Sbjct: 590 AEAPLNFSPFKIYNASNFLYLNWFPPAEASLKRTLIQKLIFELLENRSREVSNEQNQSCE 649
Query: 603 HPSSQPTNDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISISGASPQRDAQCT 662
P + ND +G E +L + +P + + D ++GI++++ S R Q
Sbjct: 650 SPVA--VNDDMGIE----VLSERCSPLIDCNGDMTQTQD-DQGIEMTLLERSSMRHIQAA 702
Query: 663 RD 664
D
Sbjct: 703 ND 704
Score = 40.8 bits (94), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 7 KKKYKVFEFSEEDELVEKTAKKMLGKYSNPRKNQRHSSPIDKYKFLQFF 55
KK ++VF+F EEDEL E A K+L K++NP +SP+ + + +Q F
Sbjct: 2 KKNFEVFDFKEEDELAESAAGKLLEKFTNPSPC---NSPVLQRQRIQSF 47
>sp|Q2PS26|ULP1D_ARATH Ubiquitin-like-specific protease 1D OS=Arabidopsis thaliana
GN=ULP1D PE=1 SV=1
Length = 584
Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/271 (34%), Positives = 152/271 (56%), Gaps = 44/271 (16%)
Query: 335 EDVVYP-KDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQ--QDFHFFN 391
ED+ YP +DDP V + +D++ L P ++ +++FY+++L +I + Q D HFFN
Sbjct: 330 EDICYPTRDDPHFVQVCLKDLECLAPREYLTSPVMNFYMRFLQQQISSSNQISADCHFFN 389
Query: 392 SFFFRKLADL------DKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSL 445
++F++KL+D DKD A F R R+W + ++LF K YIFIP++ LHWSL
Sbjct: 390 TYFYKKLSDAVTYKGNDKD--------AFFVRFRRWWKGIDLFRKAYIFIPIHEDLHWSL 441
Query: 446 IVICHPGEVPYFRDDEIEKSLKVPCILHMDSIK-GSHRGLKNLIQGYLSEEWKERHSNTD 504
+++C P D + E L ILH+DS+ S + + ++ +L +EW + N D
Sbjct: 442 VIVCIP-------DKKDESGL---TILHLDSLGLHSRKSIVENVKRFLKDEWN--YLNQD 489
Query: 505 D--------EVPSKFL--RLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKK 554
D E K L R+ A +++PQQ+N FDCG F+L +++ F++EA LK+
Sbjct: 490 DYSLDLPISEKVWKNLPRRISEAVVQVPQQKNDFDCGPFVLFFIKRFIEEAPQR---LKR 546
Query: 555 KQVSNFLNRNWFPPAEVSMKRAQIKKLLYEI 585
K + F ++ WF P E S R +I+ L E+
Sbjct: 547 KDLGMF-DKKWFRPDEASALRIKIRNTLIEL 576
>sp|O13769|ULP2_SCHPO Ubiquitin-like-specific protease 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp2 PE=1 SV=2
Length = 638
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 145/283 (51%), Gaps = 41/283 (14%)
Query: 337 VVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDR---QQDFHFFNSF 393
+VYP +++ I+ D+ L F+NDTI+DFY++YL K+QT D H FN+F
Sbjct: 337 LVYPFSGTNSIAITNTDLTRLNEGEFLNDTIVDFYLRYLYCKLQTQNPSLANDTHIFNTF 396
Query: 394 FFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICH--- 450
F+ +L DKD R + VRKWT+KV+LF K YI +P+N + HW L +IC+
Sbjct: 397 FYNRLTSKDKD-----GKRLGHRGVRKWTQKVDLFHKKYIIVPINETFHWYLAIICNIDR 451
Query: 451 --PGEVPYFRDDEI----------------EKSLKVPCILHMDSIKGSHRGLKNLIQGYL 492
P + DEI E + P IL DS+ H+G N ++ YL
Sbjct: 452 LMPVDTKLEEQDEIVMSSVEQPSASKTRQAELTSNSPAILIFDSLANLHKGALNYLREYL 511
Query: 493 SEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFL---KEALSNF 549
EE ER + V K ++ ++PQQ N DCG++ LH+VELFL ++ ++N
Sbjct: 512 LEEAFERKN-----VHLKSTDIRGFHAKVPQQSNFSDCGIYALHFVELFLETPEQVIANT 566
Query: 550 --NPLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHS 590
L++ NF ++ W +++ R +K L+ +S + S
Sbjct: 567 LDKSLRRTDAKNF-DQQW-NLQKINTMRCDLKGLIRRLSTEWS 607
>sp|Q8RWN0|ULP1C_ARATH Ubiquitin-like-specific protease 1C OS=Arabidopsis thaliana
GN=ULP1C PE=1 SV=1
Length = 571
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 146/268 (54%), Gaps = 36/268 (13%)
Query: 335 EDVVYPKDDP----DAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKI-QTDR-QQDFH 388
ED+ YP D D V +S +D+K L P ++ +I+FYI+Y+ + + D+ + H
Sbjct: 315 EDIYYPSSDQSDGRDLVQVSLKDLKCLSPGEYLTSPVINFYIRYVQHHVFSADKTAANCH 374
Query: 389 FFNSFFFRKLADLDKDPSSACEGR---AAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSL 445
FFN+FF++KL + + + +G A F + R+W + +LF K YIFIP++ LHWSL
Sbjct: 375 FFNTFFYKKLTE-----AVSYKGNDRDAYFVKFRRWWKGFDLFCKSYIFIPIHEDLHWSL 429
Query: 446 IVICHPGEVPYFRDDEIEKSLKVPCILHMDSIKGSHRGLK-NLIQGYLSEEWKERHSNTD 504
++IC P D E E L I+H+DS+ R L N ++ +L EEW + +
Sbjct: 430 VIICIP-------DKEDESGL---TIIHLDSLGLHPRNLIFNNVKRFLREEWNYLNQDAP 479
Query: 505 DEVP--SKFLR-----LQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQV 557
++P +K R + A +++PQQ+N FDCGLFLL ++ F++EA Q
Sbjct: 480 LDLPISAKVWRDLPNMINEAEVQVPQQKNDFDCGLFLLFFIRRFIEEAPQRLT----LQD 535
Query: 558 SNFLNRNWFPPAEVSMKRAQIKKLLYEI 585
+++ WF P E S R +I +L ++
Sbjct: 536 LKMIHKKWFKPEEASALRIKIWNILVDL 563
>sp|A7MBJ2|SENP7_BOVIN Sentrin-specific protease 7 OS=Bos taurus GN=SENP7 PE=2 SV=1
Length = 1047
Score = 136 bits (342), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 144/305 (47%), Gaps = 69/305 (22%)
Query: 337 VVYPKDDPDAVL-ISERDVKLLEPDTFINDTIIDFYIKYLN-NKIQTDRQQDFHFFNSFF 394
+VYP L ++ D++ LE F+ND IIDFY+KYL K + + H F+SFF
Sbjct: 746 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFF 805
Query: 395 F----RKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVIC- 449
+ RK +L +D + + +RVR WTR +N+F KDYIF+PVN S HW L VIC
Sbjct: 806 YKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 865
Query: 450 ----------HPGEVPYFRDDE-----------------------------------IEK 464
P +P + E +K
Sbjct: 866 PWLEEVVYEDFPQTIPQYSQAEESHHDSRTIDNDLHTSSALSSGTEDSQSPEMNVTVPKK 925
Query: 465 SLKVPCILHMDSIKGSHRGLKNLIQG---YLSEEWKERHSNTDDEVPSKFLRLQFAPLEL 521
K PCIL +DS+K + ++N +Q YL EW E T E SK + P ++
Sbjct: 926 MCKRPCILILDSLKAA--SIQNTVQNLREYLEVEW-EVKRKTHREF-SKTNMVDLCP-KV 980
Query: 522 PQQQNSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
P+Q NS DCG++LL YVE F K+ + NF P+ ++ WFP + KR I++
Sbjct: 981 PKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 1032
Query: 581 LLYEI 585
L+ ++
Sbjct: 1033 LILKL 1037
>sp|D3ZF42|SENP7_RAT Sentrin-specific protease 7 OS=Rattus norvegicus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 145/305 (47%), Gaps = 69/305 (22%)
Query: 337 VVYPKDDPDAVL-ISERDVKLLEPDTFINDTIIDFYIKYLN-NKIQTDRQQDFHFFNSFF 394
+VYP L ++ D++ LE F+ND IIDFY+KYL K + + H F+SFF
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFF 795
Query: 395 F----RKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICH 450
+ RK +L +D + +RVR WTR +N+F KDYIF+PVN S HW L VIC
Sbjct: 796 YKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 855
Query: 451 PG--EVPY----------FRDDEIE----------------------------------K 464
P E Y F+D + + K
Sbjct: 856 PWLEEAVYEDFPQTVSQEFQDQQSQHDNKTIDNDPHTTSTVFTSAEESQSTETSMSVPKK 915
Query: 465 SLKVPCILHMDSIKGSHRGLKNLIQG---YLSEEWKERHSNTDDEVPSKFLRLQFAPLEL 521
K PCIL +DS+K + ++N +Q YL EW E T E SK + P ++
Sbjct: 916 MCKRPCILILDSLKAA--SIQNTVQNLREYLEVEW-EVKRKTHREF-SKTNMVDLCP-KV 970
Query: 522 PQQQNSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
P+Q NS DCG++LL YVE F ++ + NF P+ ++ WFP + KR I++
Sbjct: 971 PKQDNSSDCGVYLLQYVESFFQDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 1022
Query: 581 LLYEI 585
L+ ++
Sbjct: 1023 LILKL 1027
>sp|Q8BUH8|SENP7_MOUSE Sentrin-specific protease 7 OS=Mus musculus GN=Senp7 PE=2 SV=1
Length = 1037
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 144/305 (47%), Gaps = 69/305 (22%)
Query: 337 VVYPKDDPDAVL-ISERDVKLLEPDTFINDTIIDFYIKYLN-NKIQTDRQQDFHFFNSFF 394
+VYP L ++ D++ LE F+ND IIDFY+KYL K + + H F+SFF
Sbjct: 736 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLLLEKASDELVERSHIFSSFF 795
Query: 395 F----RKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICH 450
+ RK +L +D + +RVR WTR +N+F KDYIF+PVN S HW L VIC
Sbjct: 796 YKCLTRKENNLTEDNPDLSVAQRRHRRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 855
Query: 451 PG-EVPYFRD----------------------------------------DEIEKSL--- 466
P E + D E+ S+
Sbjct: 856 PWLEEAVYEDCPQTVSQQFQGQQSQHDHKMTDNDPHTTSTVSTSAEDSQSTEVNMSVPKK 915
Query: 467 --KVPCILHMDSIKGSHRGLKNLIQG---YLSEEWKERHSNTDDEVPSKFLRLQFAPLEL 521
K PCIL +DS+K + ++N +Q YL EW E T E SK + P ++
Sbjct: 916 MCKRPCILILDSLKAA--SIQNTVQNLREYLEVEW-EVKRKTHREF-SKTNMVDLCP-KV 970
Query: 522 PQQQNSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
P+Q NS DCG++LL YVE F ++ + NF P+ ++ WFP + KR I++
Sbjct: 971 PKQDNSSDCGVYLLQYVESFFQDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 1022
Query: 581 LLYEI 585
L+ ++
Sbjct: 1023 LILKL 1027
>sp|Q9BQF6|SENP7_HUMAN Sentrin-specific protease 7 OS=Homo sapiens GN=SENP7 PE=1 SV=4
Length = 1050
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 145/305 (47%), Gaps = 69/305 (22%)
Query: 337 VVYPKDDPDAVL-ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQ-QDFHFFNSFF 394
+VYP L ++ D++ LE F+ND IIDFY+KYL + +D + H F+SFF
Sbjct: 749 IVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELVERSHIFSSFF 808
Query: 395 F----RKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICH 450
+ RK +L +D + + +RVR WTR +N+F KDYIF+PVN S HW L VIC
Sbjct: 809 YKCLTRKENNLTEDNPNLSMAQRRHKRVRTWTRHINIFNKDYIFVPVNESSHWYLAVICF 868
Query: 451 PG-EVPYFRD------------------DEIEKSLKV----------------------- 468
P E + D I+ L+
Sbjct: 869 PWLEEAVYEDFPQTVSQQSQAQQSQNDNKTIDNDLRTTSTLSLSAEDSQSTESNMSVPKK 928
Query: 469 ----PCILHMDSIKGSHRGLKNLIQG---YLSEEWKERHSNTDDEVPSKFLRLQFAPLEL 521
PCIL +DS+K + ++N +Q YL EW E T + SK + P ++
Sbjct: 929 MCKRPCILILDSLKAA--SVQNTVQNLREYLEVEW-EVKLKTHRQF-SKTNMVDLCP-KV 983
Query: 522 PQQQNSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
P+Q NS DCG++LL YVE F K+ + NF P+ ++ WFP + KR I++
Sbjct: 984 PKQDNSSDCGVYLLQYVESFFKDPIVNFELPIHLEK--------WFPRHVIKTKREDIRE 1035
Query: 581 LLYEI 585
L+ ++
Sbjct: 1036 LILKL 1040
>sp|Q91ZX6|SENP2_MOUSE Sentrin-specific protease 2 OS=Mus musculus GN=Senp2 PE=1 SV=2
Length = 588
Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 115/233 (49%), Gaps = 44/233 (18%)
Query: 344 PDAVL-------ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFR 396
PD +L I+ D++ L+ ++ND +I+FY+ L + + H F++FF+
Sbjct: 384 PDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHAFSTFFYP 443
Query: 397 KLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPY 456
KL +Q V++WT+ VNLFE++ + +P++ +HWSL+V+
Sbjct: 444 KLKS------------GGYQAVKRWTKGVNLFEQELVLVPIHRKVHWSLVVM-------- 483
Query: 457 FRDDEIEKSLKVPCILHMDSI-KGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQ 515
L+ C+ ++DS+ + HR + L+Q YL +E K + NTD + ++
Sbjct: 484 --------DLRKKCLKYLDSMGQKGHRICEILLQ-YLQDESKTKR-NTDLNL-LEWTHYS 532
Query: 516 FAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFN----PL-KKKQVSNFLNR 563
P E+PQQ N DCG+F Y + ++ F PL +KK V L++
Sbjct: 533 MKPHEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEILHQ 585
>sp|Q9HC62|SENP2_HUMAN Sentrin-specific protease 2 OS=Homo sapiens GN=SENP2 PE=1 SV=3
Length = 589
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 111/221 (50%), Gaps = 37/221 (16%)
Query: 349 ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSA 408
I+ D++ L+ ++ND +I+FY+ L + + H F++FF+ KL
Sbjct: 397 ITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKS-------- 448
Query: 409 CEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKV 468
+Q V++WT+ VNLFE++ I +P++ +HWSL+VI L+
Sbjct: 449 ----GGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI----------------DLRK 488
Query: 469 PCILHMDSI-KGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNS 527
C+ ++DS+ + HR + L+Q YL +E K + N+D + ++ P E+PQQ N
Sbjct: 489 KCLKYLDSMGQKGHRICEILLQ-YLQDESKTKR-NSDLNL-LEWTHHSMKPHEIPQQLNG 545
Query: 528 FDCGLFLLHYVELFLKEALSNFN----PL-KKKQVSNFLNR 563
DCG+F Y + ++ F PL +KK V L++
Sbjct: 546 SDCGMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEILHQ 586
>sp|Q5R7K7|SENP2_PONAB Sentrin-specific protease 2 OS=Pongo abelii GN=SENP2 PE=2 SV=1
Length = 589
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 37/221 (16%)
Query: 349 ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSA 408
I+ D++ L+ ++ND +I+FY+ L + + H F++FF+ KL
Sbjct: 397 ITRGDIQTLKNYHWLNDEVINFYMNLLVERNKKQGYPALHVFSTFFYPKLKS-------- 448
Query: 409 CEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKV 468
+Q V++WT+ VNLFE++ I +P++ +HWSL+VI L+
Sbjct: 449 ----GGYQAVKRWTKGVNLFEQEIILVPIHRKVHWSLVVI----------------DLRK 488
Query: 469 PCILHMDSI-KGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNS 527
C+ ++DS+ + HR + L+Q YL +E K + N D + ++ P E+PQQ N
Sbjct: 489 KCLKYLDSMGQKGHRICEILLQ-YLQDESKTKR-NIDLNL-LEWTHYSMKPHEIPQQLNG 545
Query: 528 FDCGLFLLHYVELFLKEALSNFN----PL-KKKQVSNFLNR 563
DCG+F Y + ++ F PL +KK V L++
Sbjct: 546 SDCGMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEILHQ 586
>sp|Q6P7W0|SENP6_MOUSE Sentrin-specific protease 6 OS=Mus musculus GN=Senp6 PE=1 SV=3
Length = 1132
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 330 FDEPFED-VVYPKDDPDA-VLISERDVKLLEPDTFINDTIIDFYIKYLN-NKIQTDRQQD 386
F P E +VYP + ++ D+ L F+ND IIDFY+KYL K++ +
Sbjct: 667 FIGPVEKLIVYPPPPAKGGISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLKKEDADR 726
Query: 387 FHFFNSFFFRKLADLDK---DPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHW 443
H F+SFF+++L ++ + ++ + RV+ WTR V++FEKD+IF+P+N + HW
Sbjct: 727 IHIFSSFFYKRLNQRERRNPETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHW 786
Query: 444 SLIVICHPG 452
L V+C PG
Sbjct: 787 FLAVVCFPG 795
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 13/138 (9%)
Query: 467 KVPCILHMDSIKGSHR-GLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQ 525
K PCIL MDS++G R + +++ YL EW+ + + SK + P ++PQQ
Sbjct: 988 KQPCILLMDSLRGPSRSNVVKILREYLEVEWEVKKGSKRSF--SKDVMKGSNP-KVPQQN 1044
Query: 526 NSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYE 584
N DCG+++L YVE F + + NF P+ N + NWFPP + KR +I+ ++ +
Sbjct: 1045 NFSDCGVYVLQYVESFFENPVLNFELPM------NLM--NWFPPPRMKTKREEIRNIILK 1096
Query: 585 ISKDHSRRKDPSADSVDE 602
+ + S+ K DS+ E
Sbjct: 1097 LQESQSKDKKLLKDSLAE 1114
>sp|Q9GZR1|SENP6_HUMAN Sentrin-specific protease 6 OS=Homo sapiens GN=SENP6 PE=1 SV=2
Length = 1112
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 330 FDEPFED-VVYPKDDPDA-VLISERDVKLLEPDTFINDTIIDFYIKYLN-NKIQTDRQQD 386
F P E +VYP + ++ D+ L F+ND IIDFY+KYL K++ +
Sbjct: 647 FIGPVEKLIVYPPPPAKGGISVTNEDLHCLNEGEFLNDVIIDFYLKYLVLEKLKKEDADR 706
Query: 387 FHFFNSFFFRKLADLDK---DPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHW 443
H F+SFF+++L ++ + ++ + RV+ WTR V++FEKD+IF+P+N + HW
Sbjct: 707 IHIFSSFFYKRLNQRERRNHETTNLSIQQKRHGRVKTWTRHVDIFEKDFIFVPLNEAAHW 766
Query: 444 SLIVICHPG 452
L V+C PG
Sbjct: 767 FLAVVCFPG 775
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 467 KVPCILHMDSIKGSHR-GLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQ 525
K PCIL MDS++G R + +++ YL EW+ + + SK + P ++PQQ
Sbjct: 969 KQPCILLMDSLRGPSRSNVVKILREYLEVEWEVKKGSKRSF--SKDVMKGSNP-KVPQQN 1025
Query: 526 NSFDCGLFLLHYVELFLKEALSNFN-PLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYE 584
N DCG+++L YVE F + + +F P+ NWFPP + KR +I+ ++ +
Sbjct: 1026 NFSDCGVYVLQYVESFFENPILSFELPMNLA--------NWFPPPRMRTKREEIRNIILK 1077
Query: 585 ISKDHSRRKDPSADS 599
+ +D S+ K D+
Sbjct: 1078 LQEDQSKEKRKHKDT 1092
>sp|Q9EQE1|SENP2_RAT Sentrin-specific protease 2 OS=Rattus norvegicus GN=Senp2 PE=1 SV=1
Length = 588
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 114/233 (48%), Gaps = 44/233 (18%)
Query: 344 PDAVL-------ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFR 396
PD +L I+ D++ L+ ++ND +I+FY+ L + + H ++FF+
Sbjct: 384 PDEILSSAFKLRITRGDIQTLKNYHWLNDEVINFYMNLLVERSKKQGYPALHALSTFFYP 443
Query: 397 KLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPY 456
KL +Q V++WT+ VNLF+++ + +P++ +HWSL+V+
Sbjct: 444 KLKS------------GGYQAVKRWTKGVNLFDQELVLVPIHRKVHWSLVVM-------- 483
Query: 457 FRDDEIEKSLKVPCILHMDSI-KGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQ 515
L+ C+ ++DS+ + HR + L+Q YL +E K + NTD + ++
Sbjct: 484 --------DLRKKCLKYLDSMGQKGHRICEILLQ-YLQDESKTKR-NTDLNL-LEWTHYS 532
Query: 516 FAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFN----PL-KKKQVSNFLNR 563
P E+PQQ N DCG+F Y + ++ F PL +KK V L++
Sbjct: 533 MKPHEIPQQLNGSDCGMFTCKYADYISRDKPITFTQHQMPLFRKKMVWEILHQ 585
>sp|Q94F30|ESD4_ARATH Ubiquitin-like-specific protease ESD4 OS=Arabidopsis thaliana
GN=ESD4 PE=1 SV=1
Length = 489
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 102/194 (52%), Gaps = 35/194 (18%)
Query: 354 VKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDF--HFFNSFFFRKLADLDKDPSSACEG 411
++ L P ++ND +I+ Y++ L + + ++ H+FN+FF++KL +
Sbjct: 295 LQCLTPSAWLNDEVINVYLELLKERETREPKKYLKCHYFNTFFYKKLV---------SDS 345
Query: 412 RAAFQRVRKWT--RKVN--LFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLK 467
F+ VR+WT RK+ L + D IF+P++ +HW+L VI + +
Sbjct: 346 GYNFKAVRRWTTQRKLGYALIDCDMIFVPIHRGVHWTLAVINN----------------R 389
Query: 468 VPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNS 527
+L++DS+ G + N + Y+ +E E+ + ++ + ++F +LPQQ+N
Sbjct: 390 ESKLLYLDSLNGVDPMILNALAKYMGDEANEK---SGKKIDANSWDMEFVE-DLPQQKNG 445
Query: 528 FDCGLFLLHYVELF 541
+DCG+F+L Y++ F
Sbjct: 446 YDCGMFMLKYIDFF 459
>sp|P59110|SENP1_MOUSE Sentrin-specific protease 1 OS=Mus musculus GN=Senp1 PE=2 SV=1
Length = 640
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 35/222 (15%)
Query: 347 VLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPS 406
+ I+ +D++ L ++ND II+FY+ L + + H FN+FFF KL
Sbjct: 446 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGFPSVHAFNTFFFTKLKT------ 499
Query: 407 SACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSL 466
A +Q V++WT+KV++F D + +P++ +HW L V+
Sbjct: 500 ------AGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVV----------------DF 537
Query: 467 KVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQN 526
+ I + DS+ G + ++ YL +E ++ D + + E+PQQ N
Sbjct: 538 RRKSITYYDSMGGINNEACRILLQYLKQESVDKKRKEFDTNGWQLFSKKSQ--EIPQQMN 595
Query: 527 SFDCGLFLLHYVELFLKEALSNFNP-----LKKKQVSNFLNR 563
DCG+F Y + K+ NF +K+ V L+R
Sbjct: 596 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILHR 637
>sp|Q5RBB1|SENP1_PONAB Sentrin-specific protease 1 OS=Pongo abelii GN=SENP1 PE=2 SV=1
Length = 645
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 347 VLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPS 406
+ I+ +D++ L ++ND II+FY+ L + + H FN+FFF KL
Sbjct: 451 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKT------ 504
Query: 407 SACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSL 466
A +Q V++WT+KV++F D + +P++ +HW L V+ FR I
Sbjct: 505 ------AGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVD-------FRKKNIT--- 548
Query: 467 KVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQN 526
+ DS+ G + ++ YL +E ++ D + + E+PQQ N
Sbjct: 549 ------YYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLFSKK--SQEIPQQMN 600
Query: 527 SFDCGLFLLHYVELFLKEALSNFNP-----LKKKQVSNFLNR 563
DCG+F Y + K+ NF +K+ V L+R
Sbjct: 601 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILHR 642
>sp|Q9P0U3|SENP1_HUMAN Sentrin-specific protease 1 OS=Homo sapiens GN=SENP1 PE=1 SV=2
Length = 644
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 347 VLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPS 406
+ I+ +D++ L ++ND II+FY+ L + + H FN+FFF KL
Sbjct: 450 LTITRKDIQTLNHLNWLNDEIINFYMNMLMERSKEKGLPSVHAFNTFFFTKLKT------ 503
Query: 407 SACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSL 466
A +Q V++WT+KV++F D + +P++ +HW L V+ FR I
Sbjct: 504 ------AGYQAVKRWTKKVDVFSVDILLVPIHLGVHWCLAVVD-------FRKKNIT--- 547
Query: 467 KVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQN 526
+ DS+ G + ++ YL +E ++ D + + E+PQQ N
Sbjct: 548 ------YYDSMGGINNEACRILLQYLKQESIDKKRKEFDTNGWQLFSKK--SQEIPQQMN 599
Query: 527 SFDCGLFLLHYVELFLKEALSNFNP-----LKKKQVSNFLNR 563
DCG+F Y + K+ NF +K+ V L+R
Sbjct: 600 GSDCGMFACKYADCITKDRPINFTQQHMPYFRKRMVWEILHR 641
>sp|O65278|ULP1B_ARATH Putative ubiquitin-like-specific protease 1B OS=Arabidopsis
thaliana GN=ULP1B PE=5 SV=2
Length = 341
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 102/200 (51%), Gaps = 36/200 (18%)
Query: 349 ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDF--HFFNSFFFRKLADLDKDPS 406
IS ++ L P+ ++ND + + Y++ L + D Q+ F HFFN+FF+ KL
Sbjct: 141 ISGETLQCLRPNQWLNDDVTNLYLELLKERQTRDPQKYFKCHFFNTFFYVKLVS------ 194
Query: 407 SACEGRAAFQRVRKWTRK----VNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEI 462
++ V +WT K +L + D IF+P++ +HW+L VI +
Sbjct: 195 ---GSGYNYKAVSRWTTKRKLGYDLIDCDIIFVPIHIDIHWTLGVI-----------NNR 240
Query: 463 EKSLKVPCILHMDSI-KGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLEL 521
E+ +++DS+ G + N + YL +E K++ S + +V S +++ E
Sbjct: 241 ERKF-----VYLDSLFTGVGHTILNAMAKYLVDEVKQK-SQKNIDVSS--WGMEYVE-ER 291
Query: 522 PQQQNSFDCGLFLLHYVELF 541
PQQQN +DCG+F+L Y++ +
Sbjct: 292 PQQQNGYDCGMFMLKYIDFY 311
>sp|Q8GYL3|ULP1A_ARATH Ubiquitin-like-specific protease 1A OS=Arabidopsis thaliana
GN=ULP1A PE=2 SV=2
Length = 502
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 34/199 (17%)
Query: 349 ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDF--HFFNSFFFRKLADLDKDPS 406
I+ + ++ L+P ++ND +I+ Y+ L + + ++ HFFN+FFF KL + S
Sbjct: 302 ITGKILRCLKPGKWLNDEVINLYMVLLKEREAREPKKFLKCHFFNTFFFTKLVN-----S 356
Query: 407 SACEGRAAFQRVRKWTRK----VNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEI 462
+ A VR+WT +L + D IFIP++ ++HW+L VI
Sbjct: 357 ATGYNYGA---VRRWTSMKRLGYHLKDCDKIFIPIHMNIHWTLAVI-------------- 399
Query: 463 EKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELP 522
++K ++DS KG + + + Y +E +++ S D +V R +F +LP
Sbjct: 400 --NIKDQKFQYLDSFKGREPKILDALARYFVDEVRDK-SEVDLDVSR--WRQEFVQ-DLP 453
Query: 523 QQQNSFDCGLFLLHYVELF 541
Q+N FDCG+F++ Y++ +
Sbjct: 454 MQRNGFDCGMFMVKYIDFY 472
>sp|P40537|ULP2_YEAST Ubiquitin-like-specific protease 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP2 PE=1 SV=1
Length = 1034
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 198/474 (41%), Gaps = 79/474 (16%)
Query: 326 CSIEFDEP--FE-DVVYPKDDPDAVLISERDVKLLEPDTFINDTIIDFYIK-YLNNKIQT 381
+ EF+ P F+ + Y +D + I+ +D K L ++ND+I+DF+ K Y+ + I+
Sbjct: 418 ATTEFETPELFKPSLCYKFNDGSSYTITNQDFKCLFNKDWVNDSILDFFTKFYIESSIEK 477
Query: 382 D--RQQDFHFFNSFFFRKLADLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNY 439
+++ H +SFF+ KL D + V+KW +LF K Y+ IP+N
Sbjct: 478 SIIKREQVHLMSSFFYTKLISNPAD---------YYSNVKKWVNNTDLFSKKYVVIPINI 528
Query: 440 SLHWSLIVICHPGEVPYFR----------DDEIEKSLKVPCILHMDSIKGSHRGLKNLIQ 489
S HW +I + + F DEI + + IL DS++ +H + I+
Sbjct: 529 SYHWFSCIITNLDAILDFHQNKDKNDAINSDEISINNPLVNILTFDSLRQTHSREIDPIK 588
Query: 490 GYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNF 549
+L +++S D+ ++++ P+ PQQ N DCG+ ++ + F + +
Sbjct: 589 EFLISYALDKYSIQLDKTQ---IKMKTCPV--PQQPNMSDCGVHVILNIRKFFENPVETI 643
Query: 550 N-----PLKKKQVSNFLNRNWFPPAEVSMKRAQIKKLLYEISKDHSR--RKDPSADSVDE 602
+ +K K + + +F E + R ++ L + ++ +K+ + V +
Sbjct: 644 DVWKNSKIKSKHFTAKMINKYFDKNERNSARKNLRHTLKLLQLNYISYLKKENLYEEVMQ 703
Query: 603 HPSSQPTNDKIGKETGAVILGQMWNPTLPGQQGFSSISDAEKGIQISISGASPQRDAQCT 662
+ TN + + ++ Q +I + K ++ P C+
Sbjct: 704 MEEKKSTN---------INNNENYDDDDEEIQIIENIDQSSKDNNAQLTSEPP-----CS 749
Query: 663 RDPEFSFKEQ---------CKLGTG--------PASLSDLRYQHVTSRLRRSIM---SPI 702
R S E+ + TG P + V+ +R +I+ SP
Sbjct: 750 RSSSISTTEREPTELHNSVVRQPTGEIITDNEDPVRAASPETASVSPPIRHNILKSSSPF 809
Query: 703 --EEAKETDEQMATSPYNVENFKQ--VTRLARKYCGVPPKIWCDKQFSPDFDIL 752
E A ET+++ TSPY F + + A+++ GV I D+ S DI+
Sbjct: 810 ISESANETEQEEFTSPY----FGRPSLKTRAKQFEGVSSPIKNDQALSSTHDIM 859
>sp|Q96HI0|SENP5_HUMAN Sentrin-specific protease 5 OS=Homo sapiens GN=SENP5 PE=1 SV=3
Length = 755
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 41/194 (21%)
Query: 353 DVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGR 412
D+ L+ ++ND +I+ Y + + + + HFFNSFF R+L
Sbjct: 573 DLATLDGQNWLNDQVINMYGELIMDAVP----DKVHFFNSFFHRQLVT------------ 616
Query: 413 AAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCIL 472
+ V++WT+KV+LF+K + IP++ +HWSLI + + F D +
Sbjct: 617 KGYNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDSQ----------- 665
Query: 473 HMDSIKGSH-RGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLE-LPQQQNSFDC 530
G H + I+ YL E +E++ P Q A + +PQQ+N DC
Sbjct: 666 ------GIHFKFCVENIRKYLLTEAREKNR------PEFLQGWQTAVTKCIPQQKNDSDC 713
Query: 531 GLFLLHYVELFLKE 544
G+F+L Y + E
Sbjct: 714 GVFVLQYCKCLALE 727
>sp|Q8WP32|SENP5_MACFA Sentrin-specific protease 5 OS=Macaca fascicularis GN=SENP5 PE=2
SV=1
Length = 755
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 41/194 (21%)
Query: 353 DVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGR 412
D+ L+ ++ND +I+ Y + + + + HFFNSFF R+L
Sbjct: 573 DLATLDGQNWLNDQVINMYGELIMDAVP----DKVHFFNSFFHRQLVT------------ 616
Query: 413 AAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCIL 472
+ V++WT+KV+LF+K + IP++ +HWSLI + + F D +
Sbjct: 617 KGYNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSNRIISFYDSQ----------- 665
Query: 473 HMDSIKGSH-RGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLE-LPQQQNSFDC 530
G H + I+ YL E +E++ P Q A + +PQQ+N DC
Sbjct: 666 ------GIHFKFCVENIRKYLLTEAREKNR------PEFLQGWQTAVTKCIPQQKNDSDC 713
Query: 531 GLFLLHYVELFLKE 544
G+F+L Y + E
Sbjct: 714 GVFVLQYCKCLALE 727
>sp|Q6NXL6|SENP5_MOUSE Sentrin-specific protease 5 OS=Mus musculus GN=Senp5 PE=2 SV=1
Length = 749
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 41/194 (21%)
Query: 353 DVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSACEGR 412
D+ L+ ++ND +I+ Y + + + + HFFNSFF R+L
Sbjct: 567 DLATLDGQNWLNDQVINMYGELIMDAVP----DKVHFFNSFFHRQLVT------------ 610
Query: 413 AAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLKVPCIL 472
+ V++WT+KV+LF+K + IP++ +HWSLI + + F D +
Sbjct: 611 KGYNGVKRWTKKVDLFKKSLLLIPIHLEVHWSLITVTLSSRIISFYDSQ----------- 659
Query: 473 HMDSIKGSH-RGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLE-LPQQQNSFDC 530
G H + I+ YL E +E++ P Q A + +PQQ+N DC
Sbjct: 660 ------GIHFKFCVENIRKYLLTEAREKNR------PEFLQGWQTAVTKCIPQQKNDSDC 707
Query: 531 GLFLLHYVELFLKE 544
G+F+L Y + E
Sbjct: 708 GVFVLQYCKCLALE 721
>sp|Q09275|ULP4_CAEEL Putative thiol protease ulp-4 OS=Caenorhabditis elegans GN=ulp-4
PE=3 SV=2
Length = 382
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 38/275 (13%)
Query: 346 AVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQ-QDFHFFNSFFFRKLA----- 399
++ I D L+ +NDT+IDFY+ ++ + D + S F+ L+
Sbjct: 130 SIAIRISDFCCLQEKDLLNDTMIDFYLNHIVEHVLPDSNGSNVTVLPSIFWHNLSLRQHA 189
Query: 400 ---DLDKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPY 456
+ +K S + F + + +L + DYI +PVN HWSL VICHP
Sbjct: 190 FDSEDEKMMSDEQKMDLKFGDLHDFVADFDLQDFDYIVVPVNEWEHWSLAVICHPF---- 245
Query: 457 FRDDEIEKSLKVPCILHMDSIKGSHRGLKN---LIQGYLSEEWKERHSNTDDEVPSKFLR 513
+ + ++ + L+N LI+ ++ +++R N +P F
Sbjct: 246 --------TAQARTVIFDSQLTADLNNLQNMATLIESFMKYSYEKRTGNA---MP--FPL 292
Query: 514 LQFAPLELPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSM 573
P +PQQ N+FDCG+F+ + FL +P K + NF +P +
Sbjct: 293 PCILPQRMPQQTNNFDCGIFIAEFARRFL------LSP--PKDLDNFDFAREYPDFSTAT 344
Query: 574 KRAQIKKLLYEISKDHSRRKDPSADSVDEHPSSQP 608
KR ++++++ +S + +R + P + ++ + ++ P
Sbjct: 345 KRTEMQRVVLSLSTNRARWR-PLVELLNGYSTAAP 378
>sp|Q09353|SENP_CAEEL Sentrin-specific protease OS=Caenorhabditis elegans GN=ulp-1 PE=2
SV=3
Length = 697
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 33/208 (15%)
Query: 343 DPDAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTD-RQQDFHFFNSFFFRKLADL 401
D ++ I ++D+ L ++ND II+FY++ + ++ D + + FN+FF+ +
Sbjct: 497 DAFSIQICKKDLATLSGLHWLNDEIINFYLQLICDRSNGDSKYPKIYAFNTFFYSNIVS- 555
Query: 402 DKDPSSACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDE 461
+ V++WTRKV++F D + +PV+ +HW + VI D
Sbjct: 556 -----------KGYASVKRWTRKVDIFAFDIVLVPVHLGMHWCMAVI-----------DM 593
Query: 462 IEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLEL 521
EK ++ DS+ + + ++GYL E ++ + ++ ++
Sbjct: 594 GEKKIEF-----YDSLYDGNTAVLPALRGYLEAESLDKKKTAMNFSGWTIQQM----TDI 644
Query: 522 PQQQNSFDCGLFLLHYVELFLKEALSNF 549
P+QQN DCG+F + E + F
Sbjct: 645 PRQQNGSDCGVFSCQFGEWASRRTTPRF 672
>sp|Q02724|ULP1_YEAST Ubiquitin-like-specific protease 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ULP1 PE=1 SV=1
Length = 621
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 50/197 (25%)
Query: 345 DAVLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKD 404
D + I+ RD K L P ++NDTII+F++KY+ FNSFF+ L++
Sbjct: 431 DNIEITVRDFKTLAPRRWLNDTIIEFFMKYIEKSTPNTVA-----FNSFFYTNLSE---- 481
Query: 405 PSSACEGRAAFQRVRKWT--RKVNLFEKDYIFIPVNYSL-HWSLIVICHPGEVPYFRDDE 461
+Q VR+W +K + + D IF P+N + HW+L +I
Sbjct: 482 --------RGYQGVRRWMKRKKTQIDKLDKIFTPINLNQSHWALGII------------- 520
Query: 462 IEKSLKVPCILHMDSIKGSHRGLKNLI----QGYLSEEWKERHSNTDDEVPSKFLRLQFA 517
LK I ++DS+ + I Q Y+ EE +H+ +D
Sbjct: 521 ---DLKKKTIGYVDSLSNGPNAMSFAILTDLQKYVMEE--SKHTIGED--------FDLI 567
Query: 518 PLELPQQQNSFDCGLFL 534
L+ PQQ N +DCG+++
Sbjct: 568 HLDCPQQPNGYDCGIYV 584
>sp|O42957|ULP1_SCHPO Ubiquitin-like-specific protease 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ulp1 PE=3 SV=1
Length = 568
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 39/196 (19%)
Query: 347 VLISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQ-QDFHFFNSFFFRKLADLDKDP 405
+ I+ +D+ L ++ND +I+FY+ ++ + + D H FN+FF+ L
Sbjct: 377 IPITLKDLHTLRNRQWLNDEVINFYMNLISERSKIDSSLPRVHGFNTFFYTSLQ------ 430
Query: 406 SSACEGRAAFQRVRKWTRK--VNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIE 463
R + VR+W +K VN+ + D +FIPV+ +HW + VI ++ +
Sbjct: 431 ------RRGYAGVRRWAKKARVNIADMDAVFIPVHLDVHWCMAVI-----------NKSK 473
Query: 464 KSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQ 523
K + + DS+ GS + +L++ Y E K +D E F P+
Sbjct: 474 KRFE-----YWDSLAGSPGKVFDLLRDYYIAETKGAVDVSDWE--------NFMDDNSPR 520
Query: 524 QQNSFDCGLFLLHYVE 539
Q+N DCG+F E
Sbjct: 521 QRNGHDCGVFACKTAE 536
>sp|Q9EP97|SENP3_MOUSE Sentrin-specific protease 3 OS=Mus musculus GN=Senp3 PE=1 SV=1
Length = 568
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 348 LISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSS 407
+++ D+ L ++ND +++ Y + + + + HFFNSFF+ KL
Sbjct: 381 VLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVP----EKVHFFNSFFYDKLRT------- 429
Query: 408 ACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLK 467
+ V++WT+ V++F K+ + IP++ +HWSLI + ++
Sbjct: 430 -----KGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISV----------------DVR 468
Query: 468 VPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNS 527
I + DS + +R I YL E ++ + + ++ A +Q N
Sbjct: 469 RRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFKMNVA-----RQNND 523
Query: 528 FDCGLFLLHYVE 539
DCG F+L Y +
Sbjct: 524 SDCGAFVLQYCK 535
>sp|Q9H4L4|SENP3_HUMAN Sentrin-specific protease 3 OS=Homo sapiens GN=SENP3 PE=1 SV=2
Length = 574
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 37/192 (19%)
Query: 348 LISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSS 407
+++ D+ L ++ND +++ Y + + + + HFFNSFF+ KL
Sbjct: 387 VLTMDDLGTLYGQNWLNDQVMNMYGDLVMDTVP----EKVHFFNSFFYDKLRT------- 435
Query: 408 ACEGRAAFQRVRKWTRKVNLFEKDYIFIPVNYSLHWSLIVICHPGEVPYFRDDEIEKSLK 467
+ V++WT+ V++F K+ + IP++ +HWSLI + ++
Sbjct: 436 -----KGYDGVKRWTKNVDIFNKELLLIPIHLEVHWSLISV----------------DVR 474
Query: 468 VPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLELPQQQNS 527
I + DS + +R I YL E ++ + + ++ A +Q N
Sbjct: 475 RRTITYFDSQRTLNRRCPKHIAKYLQAEAVKKDRLDFHQGWKGYFKMNVA-----RQNND 529
Query: 528 FDCGLFLLHYVE 539
DCG F+L Y +
Sbjct: 530 SDCGAFVLQYCK 541
>sp|Q9D2Z4|SENP8_MOUSE Sentrin-specific protease 8 OS=Mus musculus GN=Senp8 PE=1 SV=2
Length = 221
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 54/247 (21%)
Query: 348 LISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSS 407
L+ + DV LL+P +++ND II F +Y N D F + ++ K SS
Sbjct: 12 LLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHVCFISP----EVTQFIKCTSS 67
Query: 408 ACEGRAAFQRVRKWTRKVNLFEKDYIFIPVN-------YSLHWSLIVICHPGEVPYFRDD 460
E + + ++L K +F+ +N HWSL+V Y +D
Sbjct: 68 PAE-------IAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLV--------YLQDK 112
Query: 461 EIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLE 520
H D SH ++ ++E+ K + D +L F +
Sbjct: 113 N--------SFFHYD----SHSRSNSIHAKQVAEKLKAFLGSKGD-------KLVFVEEK 153
Query: 521 LPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
P Q+NS+DCG++++ E L ++L P Q+ P ++ KR + K
Sbjct: 154 APAQENSYDCGMYVICNTEA-LCQSLFRRQPESPLQL--------LTPTYITKKRGEWKD 204
Query: 581 LLYEISK 587
L+ ++K
Sbjct: 205 LIARLAK 211
>sp|Q96LD8|SENP8_HUMAN Sentrin-specific protease 8 OS=Homo sapiens GN=SENP8 PE=1 SV=1
Length = 212
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 54/247 (21%)
Query: 348 LISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSS 407
L+ + DV LL+P +++ND II F +Y N D SF ++ K S+
Sbjct: 12 LLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSDHV----SFISPEVTQFIKCTSN 67
Query: 408 ACEGRAAFQRVRKWTRKVNLFEKDYIFIPVN-------YSLHWSLIVICHPGEVPYFRDD 460
E + + ++L K +F+ +N HWSL+V Y +D
Sbjct: 68 PAE-------IAMFLEPLDLPNKRVVFLAINDNSNQAAGGTHWSLLV--------YLQDK 112
Query: 461 EIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLE 520
H DS S+ S K+ + + K +L F +
Sbjct: 113 N--------SFFHYDSHSRSN-----------SVHAKQVAEKLEAFLGRKGDKLAFVEEK 153
Query: 521 LPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
P QQNS+DCG++++ E + NF ++Q + L PA ++ KR + K
Sbjct: 154 APAQQNSYDCGMYVICNTEALCQ----NF---FRQQTESLLQL--LTPAYITKKRGEWKD 204
Query: 581 LLYEISK 587
L+ ++K
Sbjct: 205 LITTLAK 211
>sp|Q5FVJ8|SENP8_RAT Sentrin-specific protease 8 OS=Rattus norvegicus GN=Senp8 PE=2 SV=1
Length = 217
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 98/247 (39%), Gaps = 54/247 (21%)
Query: 348 LISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSS 407
L+ + DV LL+P ++ND II F +Y + D F + ++ K SS
Sbjct: 12 LLRQSDVSLLDPPNWLNDHIIGFAFEYFASSQFHDCSDHVCFISP----EVTQFIKCTSS 67
Query: 408 ACEGRAAFQRVRKWTRKVNLFEKDYIFIPVN-------YSLHWSLIVICHPGEVPYFRDD 460
E + + ++L K +F+ +N HWSL+V Y +D
Sbjct: 68 PAE-------IAMFLEPLDLPHKRVVFLAINDNSNQAAGGTHWSLLV--------YLQDK 112
Query: 461 EIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAPLE 520
H DS H ++ ++E+ K + D +L F +
Sbjct: 113 N--------SFFHYDS----HSRSNSIHAKQVAEKLKAFLGSKGD-------KLVFVEEK 153
Query: 521 LPQQQNSFDCGLFLLHYVELFLKEALSNFNPLKKKQVSNFLNRNWFPPAEVSMKRAQIKK 580
P QQNS+DCG++++ E + L ++Q + L P ++ KR + K
Sbjct: 154 APAQQNSYDCGMYVICNTEALCQN-------LFRRQPESPLQL--LTPTYITKKRGEWKD 204
Query: 581 LLYEISK 587
L+ ++K
Sbjct: 205 LIARLAK 211
>sp|Q54XR2|SENP8_DICDI Probable sentrin-specific protease 8 OS=Dictyostelium discoideum
GN=senp8 PE=3 SV=1
Length = 243
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 349 ISERDVKLLEPDTFINDTIIDFYIKYLNNKIQTDRQQDFHFFNSFFFRKLADLDKDPSSA 408
I + D+ +L+ + ++ND+II FY+++L + + ++ + ++ L
Sbjct: 14 IYQSDINILKSNQWLNDSIISFYLEWLKDGGEDNKNK--------IPNQVLLLSPSVVFC 65
Query: 409 CEGRAAFQRVR-KWTRKVNLFEKDYIFIPVNYS---------LHWSLIVICHPGEVPYFR 458
C + Q ++ + + ++L K+ IF P+ + HWSL++
Sbjct: 66 CSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGGTHWSLLIFI--------- 116
Query: 459 DDEIEKSLKVPCILHMDSIKGSHRGLKNLIQGYLSEEWKERHSNTDDEVPSKFLRLQFAP 518
KSL ++ DSI + ++ ++K S+ P L+
Sbjct: 117 -----KSLN--KFIYYDSINSFNSS----DAIFIISKFKFLLSSPP---PKTNLKEFLIN 162
Query: 519 LELPQQQNSFDCGLFLLHYVELFLK 543
+ PQQQN +DCGL++L +E LK
Sbjct: 163 QKTPQQQNGYDCGLYVLSIIEELLK 187
>sp|B9DIX2|AMPA_STACT Probable cytosol aminopeptidase OS=Staphylococcus carnosus (strain
TM300) GN=pepA PE=3 SV=1
Length = 495
Score = 34.7 bits (78), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 704 EAKETDEQMATSPYNVENFKQVTRLARKYCGVPPKIWCDKQFSPDFDILDEDESMKECRT 763
E DE T+ + E + +LAR + +PP I + F+ D++ S T
Sbjct: 158 HGAEADE--VTAIKDGEIIGEGIKLARDFSNIPPNILTPEYFA---DMI----SAHFEET 208
Query: 764 SLEVEVKDQPLAEYEGSDYPETTGKTDSF-----SNSSEGLSDFVVEDSQETSGIAAGIV 818
S+EVEVKD + EG GK F + + +G D DS + + GI
Sbjct: 209 SVEVEVKDAETLQAEGFGLIHAVGKGSEFGPRLITLTYQGADD----DSAPIALVGKGIT 264
Query: 819 EDS 821
DS
Sbjct: 265 YDS 267
>sp|A8F0P8|RPOC_RICM5 DNA-directed RNA polymerase subunit beta' OS=Rickettsia massiliae
(strain Mtu5) GN=rpoC PE=3 SV=1
Length = 1374
Score = 33.9 bits (76), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 769 VKDQPLAEYEGSDYPETTGKTDS--FSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENA 826
+K Q LAE++ P T K+ F + EG++ V D E +GI + ++ +S++ +
Sbjct: 1008 IKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGITIRDVTD--EATGIPSKVIIESKQYSR 1065
Query: 827 KLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIML-ISNEVTMSKADEQLVVKKSRP 885
+ + KGE LS+ L YL +L + + V +S D ++ +
Sbjct: 1066 GAELRPRIQLLGAKGEVITLSNG--LEARYYLPVGAVLSVEDGVQISVGD---IIAR--- 1117
Query: 886 LPKDRKQLKELNGGLPK 902
+PK+ K++ GGLP+
Sbjct: 1118 IPKESTTTKDITGGLPR 1134
>sp|Q9RH40|RPOC_RICCN DNA-directed RNA polymerase subunit beta' OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=rpoC PE=3 SV=2
Length = 1372
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 769 VKDQPLAEYEGSDYPETTGKTDS--FSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENA 826
+K Q LAE++ P T K+ F + EG+S V D E +GI + ++ +S++ +
Sbjct: 1006 IKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGISIRDVTD--EATGIPSKVIIESKQYSR 1063
Query: 827 KLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIML-ISNEVTMSKADEQLVVKKSRP 885
+ + KGE LS+ L YL +L + + V +S D ++ +
Sbjct: 1064 GAELRPRIQLLDAKGEVITLSNG--LEARYYLPVGAVLSVEDGVQISVGD---IIAR--- 1115
Query: 886 LPKDRKQLKELNGGLPK 902
+PK+ K++ GGLP+
Sbjct: 1116 IPKESTTTKDITGGLPR 1132
>sp|A8GQW5|RPOC_RICRS DNA-directed RNA polymerase subunit beta' OS=Rickettsia rickettsii
(strain Sheila Smith) GN=rpoC PE=3 SV=1
Length = 1372
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 769 VKDQPLAEYEGSDYPETTGKTDS--FSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENA 826
+K Q LAE++ P T K+ F + EG+S V D E +GI + ++ +S++ +
Sbjct: 1006 IKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGISIRDVTD--EATGIPSKVIIESKQYSR 1063
Query: 827 KLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIML-ISNEVTMSKADEQLVVKKSRP 885
+ + KGE LS+ L YL +L + + V +S D ++ +
Sbjct: 1064 GAELRPRIQLLDAKGEVITLSNG--LEARYYLPVGAVLSVEDGVQISVGD---IIAR--- 1115
Query: 886 LPKDRKQLKELNGGLPK 902
+PK+ K++ GGLP+
Sbjct: 1116 IPKESTTTKDITGGLPR 1132
>sp|B0BWB0|RPOC_RICRO DNA-directed RNA polymerase subunit beta' OS=Rickettsia rickettsii
(strain Iowa) GN=rpoC PE=3 SV=1
Length = 1372
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 769 VKDQPLAEYEGSDYPETTGKTDS--FSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENA 826
+K Q LAE++ P T K+ F + EG+S V D E +GI + ++ +S++ +
Sbjct: 1006 IKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGISIRDVTD--EATGIPSKVIIESKQYSR 1063
Query: 827 KLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIML-ISNEVTMSKADEQLVVKKSRP 885
+ + KGE LS+ L YL +L + + V +S D ++ +
Sbjct: 1064 GAELRPRIQLLDAKGEVITLSNG--LEARYYLPVGAVLSVEDGVQISVGD---IIAR--- 1115
Query: 886 LPKDRKQLKELNGGLPK 902
+PK+ K++ GGLP+
Sbjct: 1116 IPKESTTTKDITGGLPR 1132
>sp|A8EXK9|RPOC_RICCK DNA-directed RNA polymerase subunit beta' OS=Rickettsia canadensis
(strain McKiel) GN=rpoC PE=3 SV=1
Length = 1378
Score = 33.5 bits (75), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 769 VKDQPLAEYEGSDYPETTGKTDS--FSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENA 826
+K Q LAE++ P T K+ F + EG+S V D E +GI + ++ +S++ +
Sbjct: 1006 IKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGISIRDVTD--EATGIPSKVIIESKQYSR 1063
Query: 827 KLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIML-ISNEVTMSKADEQLVVKKSRP 885
+ + KGE LS+ L YL +L + + V +S D ++ +
Sbjct: 1064 GAELRPRIQLLDAKGEVITLSNG--LEARYYLPVGAVLSVEDGVQISVGD---IIAR--- 1115
Query: 886 LPKDRKQLKELNGGLPK 902
+PK+ K++ GGLP+
Sbjct: 1116 IPKESTTTKDITGGLPR 1132
>sp|Q68XM7|RPOC_RICTY DNA-directed RNA polymerase subunit beta' OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=rpoC PE=3 SV=1
Length = 1372
Score = 33.5 bits (75), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 766 EVEVKDQPLAEYEGSDYPETTGKTDS--FSNSSEGLSDFVVEDSQETSGIAAGIVEDSEE 823
++ +K Q LAE++ P T K+ F + EG+S V D E +GI + ++ +S++
Sbjct: 1003 DIVIKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGISIRDVTD--EATGIPSKVIIESKQ 1060
Query: 824 ENAKLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIML-ISNEVTMSKADEQLVVKK 882
+ + + KGE LS+ L YL +L + + + +S D ++ +
Sbjct: 1061 YSRGAELRPRIQLLDSKGEVITLSNG--LEARYYLPVGAVLSVEDGIQISVGD---IIAR 1115
Query: 883 SRPLPKDRKQLKELNGGLPK 902
+PK+ K++ GGLP+
Sbjct: 1116 ---IPKESTTTKDITGGLPR 1132
>sp|Q4UKD5|RPOC_RICFE DNA-directed RNA polymerase subunit beta' OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=rpoC PE=3 SV=1
Length = 1372
Score = 33.1 bits (74), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 769 VKDQPLAEYEGSDYPETTGKTDS--FSNSSEGLSDFVVEDSQETSGIAAGIVEDSEEENA 826
+K Q LAE++ P T K+ F + EG+S V D E +GI + ++ +S++ +
Sbjct: 1006 IKTQKLAEWDPYTIPIITEKSGKVLFKDMVEGISIRDVTD--EATGIPSKVIIESKQYSR 1063
Query: 827 KLDGKENKDSPCFKGETCNLSHEVLLSETIYLQENIML-ISNEVTMSKADEQLVVKKSRP 885
+ + KGE LS+ L YL +L + + V +S D ++ +
Sbjct: 1064 GAELRPRIQLLDAKGEVIALSNG--LEARYYLPVGAVLSVEDGVQISVGD---IIAR--- 1115
Query: 886 LPKDRKQLKELNGGLPK 902
+PK+ K++ GGLP+
Sbjct: 1116 IPKESTTTKDITGGLPR 1132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 348,842,760
Number of Sequences: 539616
Number of extensions: 15572149
Number of successful extensions: 30746
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 30593
Number of HSP's gapped (non-prelim): 102
length of query: 906
length of database: 191,569,459
effective HSP length: 127
effective length of query: 779
effective length of database: 123,038,227
effective search space: 95846778833
effective search space used: 95846778833
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)