Query 002579
Match_columns 905
No_of_seqs 394 out of 1907
Neff 4.9
Searched_HMMs 29240
Date Tue Mar 26 16:54:36 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002579.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1295-1299//hhsearch_pdb/002579hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kwj_A Zinc finger protein DPF 1.0 1 1 140.6 3.3 103 515-676 2-109 (114)
2 2ysm_A Myeloid/lymphoid or mix 1.0 1 1 139.7 5.7 96 509-673 2-102 (111)
3 3v43_A Histone acetyltransfera 1.0 1 1 132.6 4.8 103 513-674 4-111 (112)
4 4gne_A Histone-lysine N-methyl 1.0 1 1 124.5 7.1 93 506-671 7-101 (107)
5 3u5n_A E3 ubiquitin-protein li 1.0 1 1 89.4 4.2 50 511-572 4-55 (207)
6 3ask_A E3 ubiquitin-protein li 1.0 1 1 87.9 3.9 46 617-673 177-223 (226)
7 1fp0_A KAP-1 corepressor; PHD 1.0 1 1 87.8 4.5 52 507-570 18-71 (88)
8 3o36_A Transcription intermedi 1.0 1 1 87.7 4.2 49 512-572 2-52 (184)
9 3efa_A Putative acetyltransfer 1.0 1 1 86.7 11.9 118 730-858 13-131 (147)
10 2q0y_A GCN5-related N-acetyltr 1.0 1 1 86.7 11.1 85 772-857 52-146 (153)
No 1
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=1.00 E-value=1 Score=140.60 Aligned_cols=103 Identities=27% Similarity=0.765 Sum_probs=81.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 323436767876733324899946702489952233557788-----889997405232233321001334554333464
Q 002579 515 IICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLS-----SIPQGDWYCKYCQNMFERKRFLQHDANAVEAGR 589 (905)
Q Consensus 515 i~C~~C~~~~s~S~FE~HAdgG~Ll~CDgCp~afH~~CL~L~-----~vP~g~W~C~~C~~~~~kek~la~n~naia~Gr 589 (905)
..|.+|......- .-..++|+||+|++|+++||..||++. .+|++.|+|+.|..
T Consensus 2 ~~C~~C~~~~~~n--~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~------------------- 60 (114)
T 2kwj_A 2 SYCDFCLGGSNMN--KKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECKS------------------- 60 (114)
T ss_dssp CCCSSSCCBTTBC--TTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGCC-------------------
T ss_pred CCCCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCCC-------------------
T ss_conf 8086588975344--4679999986929899832321387846643116877517566273-------------------
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 24545033333343312013422478605344799877889999434167888767967777675876568999983445
Q 002579 590 VSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWFCC 669 (905)
Q Consensus 590 ~~Gvd~ie~I~~r~~R~~kd~e~e~~~C~IC~~~dfs~sgf~~~~LI~CDqCekaYHv~CL~~~~~~~LkeiP~g~WfC~ 669 (905)
|.+|+..+ +++.||.||+|+++||+.||.| +|.++|.++|||
T Consensus 61 ---------------------------C~~C~~~~------~~~~ll~Cd~C~~~yH~~Cl~p----pl~~~P~g~W~C- 102 (114)
T 2kwj_A 61 ---------------------------CILCGTSE------NDDQLLFCDDCDRGYHMYCLNP----PVAEPPEGSWSC- 102 (114)
T ss_dssp ---------------------------CTTTTCCT------TTTTEEECSSSCCEEETTTSSS----CCSSCCSSCCCC-
T ss_pred ---------------------------CCCCCCCC------CCCCEEECCCCCCCCCCCCCCC----CCCCCCCCCEEC-
T ss_conf ---------------------------37563468------8874577489894102504598----746788978199-
Q ss_pred CCCCCHH
Q ss_conf 8840036
Q 002579 670 MDCSRIN 676 (905)
Q Consensus 670 ~~C~~I~ 676 (905)
+.|....
T Consensus 103 ~~C~~~~ 109 (114)
T 2kwj_A 103 HLCWELL 109 (114)
T ss_dssp HHHHHHH
T ss_pred CCCCCHH
T ss_conf 2410344
No 2
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=1.00 E-value=1 Score=139.68 Aligned_cols=96 Identities=26% Similarity=0.826 Sum_probs=79.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC---EEECCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22577732343676787673332489994---6702489952233557788--889997405232233321001334554
Q 002579 509 YKNGLGIICHCCNSEVSPSQFEAHADGGN---LLPCDGCPRAFHKECASLS--SIPQGDWYCKYCQNMFERKRFLQHDAN 583 (905)
Q Consensus 509 ~~~~~gi~C~~C~~~~s~S~FE~HAdgG~---Ll~CDgCp~afH~~CL~L~--~vP~g~W~C~~C~~~~~kek~la~n~n 583 (905)
....+...|.+|+. +|+ ||+|++|+++||+.||++. .++++.|+|+.|..
T Consensus 2 s~~~~~~~C~~C~~------------~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~~------------- 56 (111)
T 2ysm_A 2 SSGSSGANCAVCDS------------PGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKV------------- 56 (111)
T ss_dssp CCCCCCSCBTTTCC------------CCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTCC-------------
T ss_pred CCCCCCCCCCCCCC------------CCCCCCCEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC-------------
T ss_conf 88899799957899------------88875885999999773967708865544566865876782-------------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33346424545033333343312013422478605344799877889999434167888767967777675876568999
Q 002579 584 AVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPK 663 (905)
Q Consensus 584 aia~Gr~~Gvd~ie~I~~r~~R~~kd~e~e~~~C~IC~~~dfs~sgf~~~~LI~CDqCekaYHv~CL~~~~~~~LkeiP~ 663 (905)
|.+|++.+ ++..+|.||+|+++||+.||+| +|+++|+
T Consensus 57 ---------------------------------C~~C~~~~------~~~~ll~Cd~C~~~yH~~Cl~p----pl~~~P~ 93 (111)
T 2ysm_A 57 ---------------------------------CQNCKQSG------EDSKMLVCDTCDKGYHTFCLQP----VMKSVPT 93 (111)
T ss_dssp ---------------------------------CTTTCCCS------CCTTEEECSSSCCEEEGGGSSS----CCSSCCS
T ss_pred ---------------------------------CCCCCCCC------CCCCEEECCCCCCHHHHHHCCC----CCCCCCC
T ss_conf ---------------------------------62347658------9877658999980886986587----6566889
Q ss_pred CCCEECCCCC
Q ss_conf 9834458840
Q 002579 664 GKWFCCMDCS 673 (905)
Q Consensus 664 g~WfC~~~C~ 673 (905)
+.||| +.|.
T Consensus 94 g~W~C-~~C~ 102 (111)
T 2ysm_A 94 NGWKC-KNCR 102 (111)
T ss_dssp SCCCC-HHHH
T ss_pred CCCCC-CCCC
T ss_conf 88299-2882
No 3
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=1.00 E-value=1 Score=132.57 Aligned_cols=103 Identities=29% Similarity=0.735 Sum_probs=81.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 77323436767876733324899946702489952233557788-----8899974052322333210013345543334
Q 002579 513 LGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECASLS-----SIPQGDWYCKYCQNMFERKRFLQHDANAVEA 587 (905)
Q Consensus 513 ~gi~C~~C~~~~s~S~FE~HAdgG~Ll~CDgCp~afH~~CL~L~-----~vP~g~W~C~~C~~~~~kek~la~n~naia~ 587 (905)
...+|..|..... + ....++|+||.|++|+++||..||++. .++.+.|+|+.|+.
T Consensus 4 p~~~C~~C~~~~~-~--~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~~----------------- 63 (112)
T 3v43_A 4 PIPICSFCLGTKE-Q--NREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKT----------------- 63 (112)
T ss_dssp CCSSBTTTCCCTT-C--CTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTCC-----------------
T ss_pred CCCCCCCCCCCHH-H--CCCCCCHHCEEHHHCCCCCCCCHHCCCHHHHHHHHCCCCCCCCCCC-----------------
T ss_conf 6761310389334-2--7689911163753449988970353888999875424653011775-----------------
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 64245450333333433120134224786053447998778899994341678887679677776758765689999834
Q 002579 588 GRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKGKWF 667 (905)
Q Consensus 588 Gr~~Gvd~ie~I~~r~~R~~kd~e~e~~~C~IC~~~dfs~sgf~~~~LI~CDqCekaYHv~CL~~~~~~~LkeiP~g~Wf 667 (905)
|.+|+..+ .+++.+|.||+|+++||+.||.| +|.++|+++||
T Consensus 64 -----------------------------C~vC~~~~-----~~~~~ll~Cd~C~~~yH~~Cl~p----~l~~~P~~~W~ 105 (112)
T 3v43_A 64 -----------------------------CSSCRDQG-----KNADNMLFCDSCDRGFHMECCDP----PLTRMPKGMWI 105 (112)
T ss_dssp -----------------------------BTTTCCCC-----CTTCCCEECTTTCCEECGGGCSS----CCSSCCSSCCC
T ss_pred -----------------------------CCCCCCCC-----CCCCCEEECCCCCCEEECCCCCC----CCCCCCCCCEE
T ss_conf -----------------------------44666868-----88565687489989156635899----98989998857
Q ss_pred ECCCCCC
Q ss_conf 4588400
Q 002579 668 CCMDCSR 674 (905)
Q Consensus 668 C~~~C~~ 674 (905)
| +.|..
T Consensus 106 C-~~C~~ 111 (112)
T 3v43_A 106 C-QICRP 111 (112)
T ss_dssp C-TTTSC
T ss_pred C-CCCCC
T ss_conf 9-78789
No 4
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=1.00 E-value=1 Score=124.49 Aligned_cols=93 Identities=31% Similarity=0.711 Sum_probs=78.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2542257773234367678767333248999467024--89952233557788889997405232233321001334554
Q 002579 506 LEGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCD--GCPRAFHKECASLSSIPQGDWYCKYCQNMFERKRFLQHDAN 583 (905)
Q Consensus 506 l~G~~~~~gi~C~~C~~~~s~S~FE~HAdgG~Ll~CD--gCp~afH~~CL~L~~vP~g~W~C~~C~~~~~kek~la~n~n 583 (905)
....+..+..+|.+|+ ++|+||+|| +||++||+.||+|..+|+|+|+||.|.
T Consensus 7 ~~~~~~~~~~~C~~C~------------~~G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~-------------- 60 (107)
T 4gne_A 7 KTEPKQMHEDYCFQCG------------DGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQ-------------- 60 (107)
T ss_dssp ---CCCSSCSSCTTTC------------CCSEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGB--------------
T ss_pred CCCCCCCCCCCCCCCC------------CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCC--------------
T ss_conf 6788688979998479------------97847577999999265225186875799888898999--------------
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33346424545033333343312013422478605344799877889999434167888767967777675876568999
Q 002579 584 AVEAGRVSGVDSVEQITKRCIRIVKNLEAELSGCLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPK 663 (905)
Q Consensus 584 aia~Gr~~Gvd~ie~I~~r~~R~~kd~e~e~~~C~IC~~~dfs~sgf~~~~LI~CDqCekaYHv~CL~~~~~~~LkeiP~ 663 (905)
|.+|++. .-+.|..|+++||.+|+.. .|...+.
T Consensus 61 ---------------------------------C~~C~k~----------~~~~C~~Cp~sfC~~c~~g----~l~~~~~ 93 (107)
T 4gne_A 61 ---------------------------------CDECSSA----------AVSFCEFCPHSFCKDHEKG----ALVPSAL 93 (107)
T ss_dssp ---------------------------------CTTTCSB----------CCEECSSSSCEECTTTCTT----SCEECTT
T ss_pred ---------------------------------CCCCCCC----------CCCCCCCCCCCHHHHCCCC----CCEECCC
T ss_conf ---------------------------------8817798----------9867477871011211587----3110278
Q ss_pred CCCEECCC
Q ss_conf 98344588
Q 002579 664 GKWFCCMD 671 (905)
Q Consensus 664 g~WfC~~~ 671 (905)
..|+|+.+
T Consensus 94 ~~~~c~~~ 101 (107)
T 4gne_A 94 EGRLCCSE 101 (107)
T ss_dssp TTCEECTT
T ss_pred CCCEECCC
T ss_conf 89666677
No 5
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=1.00 E-value=1 Score=89.40 Aligned_cols=50 Identities=40% Similarity=1.075 Sum_probs=44.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCC
Q ss_conf 5777323436767876733324899946702489952233557--7888899974052322333
Q 002579 511 NGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQNMF 572 (905)
Q Consensus 511 ~~~gi~C~~C~~~~s~S~FE~HAdgG~Ll~CDgCp~afH~~CL--~L~~vP~g~W~C~~C~~~~ 572 (905)
..++..|.+|. ++|+||+||+|+++||..|+ ++..+|.|+|+|+.|+...
T Consensus 4 d~~~~~C~~C~------------~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 4 DPNEDWCAVCQ------------NGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CSSCSSBTTTC------------CCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCC------------CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCEECCC
T ss_conf 88889898889------------99936776999984387158999888899887868426866
No 6
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=1.00 E-value=1 Score=87.90 Aligned_cols=46 Identities=39% Similarity=1.124 Sum_probs=40.1
Q ss_pred EEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEECCCCC
Q ss_conf 053447998778899994341678887679677776758765689999-834458840
Q 002579 617 CLLCRGCDFSKSGFGPRTILLCDQCEREFHVGCLKKHKMADLRELPKG-KWFCCMDCS 673 (905)
Q Consensus 617 C~IC~~~dfs~sgf~~~~LI~CDqCekaYHv~CL~~~~~~~LkeiP~g-~WfC~~~C~ 673 (905)
|.+|+..+ +++.+|.||.|+++||+.||.| +|..+|.+ .||| +.|.
T Consensus 177 C~vC~~~~------~~~~lL~CD~C~~~yH~~CL~P----PL~~vP~G~~W~C-p~C~ 223 (226)
T 3ask_A 177 CHLCGGRQ------DPDKQLMCDECDMAFHIYCLDP----PLSSVPSEDEWYC-PECR 223 (226)
T ss_dssp CSSSCCCC------C--CCEECSSSCCEECSCC--C----CCCSCCSSSCCCC-GGGC
T ss_pred CCCCCCCC------CCCCEEECCCCCCCEECCCCCC----CCCCCCCCCCCCC-CCCC
T ss_conf 86889979------9987688389994100756788----7456989988789-3874
No 7
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=1.00 E-value=1 Score=87.77 Aligned_cols=52 Identities=31% Similarity=0.867 Sum_probs=43.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf 54225777323436767876733324899946702489952233557--78888999740523223
Q 002579 507 EGYKNGLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQN 570 (905)
Q Consensus 507 ~G~~~~~gi~C~~C~~~~s~S~FE~HAdgG~Ll~CDgCp~afH~~CL--~L~~vP~g~W~C~~C~~ 570 (905)
......+...|.+|. ++|+||+||+|+++||+.|+ ++..+|+|+|+|+.|..
T Consensus 18 ~~~~d~n~~~C~vC~------------~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~ 71 (88)
T 1fp0_A 18 FGTLDDSATICRVCQ------------KPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHV 71 (88)
T ss_dssp CCSSSSSSSCCSSSC------------SSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCC
T ss_pred CCCCCCCCCCCCCCC------------CCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 433388998183769------------999778899999724163289897878699767726448
No 8
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=1.00 E-value=1 Score=87.67 Aligned_cols=49 Identities=37% Similarity=1.096 Sum_probs=43.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCC
Q ss_conf 777323436767876733324899946702489952233557--7888899974052322333
Q 002579 512 GLGIICHCCNSEVSPSQFEAHADGGNLLPCDGCPRAFHKECA--SLSSIPQGDWYCKYCQNMF 572 (905)
Q Consensus 512 ~~gi~C~~C~~~~s~S~FE~HAdgG~Ll~CDgCp~afH~~CL--~L~~vP~g~W~C~~C~~~~ 572 (905)
.+...|.+|. ++|+|++||+|+++||..|+ ++..+|+|+|+|+.|+...
T Consensus 2 ~~~~~C~~C~------------~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 2 PNEDWCAVCQ------------NGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSCSSCTTTC------------CCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCC------------CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 9999541179------------99905662999953081136898787999887892556865
No 9
>3efa_A Putative acetyltransferase; structural genom 2, protein structure initiative, midwest center for structu genomics, MCSG; 2.42A {Lactobacillus plantarum WCFS1}
Probab=1.00 E-value=1 Score=86.73 Aligned_cols=118 Identities=13% Similarity=0.072 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEE-EEEEECCEEEEEEEEEEECCEEEEEEEEEEECC
Q ss_conf 8899999864221898544797788421100144689813443499-999649949999999984780489746486247
Q 002579 730 LLLSQAVAIFHDCFDPIVDSISGRDLIPSMVYGRNLRGQEFGGMYC-AILTVNSSVVSAGILRVFGQEVAELPLVATSKI 808 (905)
Q Consensus 730 ~kLa~AL~Im~EcFdPiid~rTgrDLIp~MVy~r~~~~~~~~GfY~-~VL~~~~~iVsaA~lri~g~~vAEiplvAT~~~ 808 (905)
.-+...+.+..+.|.+-. +... .......+-.+.+. ++...++++||.+.+...+.+.++|..++|.++
T Consensus 13 ~d~~~i~~l~~~~f~~~~----~~~~------~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~i~~~~V~p~ 82 (147)
T 3efa_A 13 ANRAAAYALRQAVFVEER----GISA------DVEFDVKDTDQCEYAVLYLQPDLPITTLRLEPQADHVMRFGRVCTRKA 82 (147)
T ss_dssp HHHHHHHHHHHHHTTTTT----CCCH------HHHSCTTCSTTCCEEEEEEETTEEEEEEEEEECSTTEEEEEEEEECGG
T ss_pred HHHHHHHHHHHHHHHHCC----CCCC------HHHHHCCCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEECHH
T ss_conf 689999999999953015----9992------788855578875899998689918999999867998499999998687
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCEECCHH
Q ss_conf 44789369999999998542392099954524279997833694883977
Q 002579 809 NHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEEAESIWTDKFGFKKIDPE 858 (905)
Q Consensus 809 yRgqG~gr~L~~~IE~~L~~lgV~~LvLpA~~ea~~~wt~kfGF~~i~~~ 858 (905)
|||||+|+.|+..+++.++..|+..+++.+...+..||++ +||+.+++.
T Consensus 83 ~rg~Gig~~Ll~~~~~~~~~~g~~~i~l~~~~~a~~~y~~-~Gf~~~~~~ 131 (147)
T 3efa_A 83 YRGHGWGRQLLTAAEEWATQRGFTHGEIHGELTAQRFYEL-CGYRVTAGP 131 (147)
T ss_dssp GTTSSHHHHHHHHHHHHHHHTTCCEEEEEEEGGGHHHHHH-TTCEEEECC
T ss_pred HCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-CCCCCCCCC
T ss_conf 8079889999999999999769978999544889999997-698206886
No 10
>2q0y_A GCN5-related N-acetyltransferase; YP_295895.1, acetyltransferase (GNAT) family, structural genomics, joint center for ST genomics; HET: MSE; 1.80A {Ralstonia eutropha JMP134}
Probab=1.00 E-value=1 Score=86.72 Aligned_cols=85 Identities=13% Similarity=0.126 Sum_probs=74.8
Q ss_pred CEEEEEEEECCEEEEEEEEEEE----------CCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHH
Q ss_conf 3499999649949999999984----------780489746486247447893699999999985423920999545242
Q 002579 772 GMYCAILTVNSSVVSAGILRVF----------GQEVAELPLVATSKINHGKGYFQLLFACIEKLLSFLRVKSIVLPAAEE 841 (905)
Q Consensus 772 GfY~~VL~~~~~iVsaA~lri~----------g~~vAEiplvAT~~~yRgqG~gr~L~~~IE~~L~~lgV~~LvLpA~~e 841 (905)
..+.+|.+.++++||.+.+... ....++|-.++|.++|||||+|++||..+++.++..|+..++|.+...
T Consensus 52 ~~~~~va~~~~~ivG~~~~~~~~~~~~~~~~~~~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~~~~~ 131 (153)
T 2q0y_A 52 SYFGWVMEEGGAPLAGIGLMVIEWPPHPSHPLQDKRGYILNLYVDPSHRERGIGQALMNRAEAEFAERGIAFAVLHATEM 131 (153)
T ss_dssp SSEEEEEEETTEEEEEEEEEEEECCCBTTBTTCSEEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEECCCTT
T ss_pred CEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHH
T ss_conf 80699997499679999998403478888878887289999999888727999999999999999977998799986787
Q ss_pred HHHHHHHCCCCEECCH
Q ss_conf 7999783369488397
Q 002579 842 AESIWTDKFGFKKIDP 857 (905)
Q Consensus 842 a~~~wt~kfGF~~i~~ 857 (905)
|..||.+ +||..+++
T Consensus 132 A~~fY~k-~GF~~~~~ 146 (153)
T 2q0y_A 132 GQPLYAR-MGWSPTTE 146 (153)
T ss_dssp THHHHHH-TTCCCCCC
T ss_pred HHHHHHH-CCCCCCHH
T ss_conf 8999998-69965333
Done!