Query 002580
Match_columns 905
No_of_seqs 818 out of 5255
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 02:52:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002580.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002580hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0598 Ribosomal protein S6 k 100.0 2.3E-42 5E-47 364.1 16.9 205 668-901 21-228 (357)
2 KOG0595 Serine/threonine-prote 100.0 1E-41 2.2E-46 361.6 19.9 199 671-900 9-216 (429)
3 KOG0575 Polo-like serine/threo 100.0 2.3E-41 5E-46 375.5 19.4 201 672-901 18-221 (592)
4 KOG0615 Serine/threonine prote 100.0 9.6E-42 2.1E-46 360.8 13.0 203 670-902 170-385 (475)
5 KOG0616 cAMP-dependent protein 100.0 1.5E-40 3.3E-45 338.3 16.4 201 669-901 41-244 (355)
6 KOG0592 3-phosphoinositide-dep 100.0 3.9E-40 8.5E-45 359.4 16.1 217 668-900 69-289 (604)
7 KOG0610 Putative serine/threon 100.0 1.3E-39 2.8E-44 345.5 19.5 257 646-902 50-339 (459)
8 KOG0605 NDR and related serine 100.0 4.4E-40 9.6E-45 359.7 16.2 231 668-900 137-390 (550)
9 KOG0581 Mitogen-activated prot 100.0 6.3E-39 1.4E-43 338.2 18.6 201 667-900 74-279 (364)
10 KOG0591 NIMA (never in mitosis 100.0 2.1E-40 4.5E-45 334.4 5.8 203 670-900 17-230 (375)
11 KOG0593 Predicted protein kina 100.0 3.7E-38 8E-43 321.1 11.6 200 672-901 2-205 (396)
12 KOG0694 Serine/threonine prote 100.0 3E-37 6.6E-42 346.2 16.4 203 667-899 363-569 (694)
13 KOG0611 Predicted serine/threo 100.0 1.6E-37 3.5E-42 325.7 12.5 200 671-900 52-255 (668)
14 KOG0583 Serine/threonine prote 100.0 3.4E-36 7.5E-41 336.3 20.5 203 669-900 14-225 (370)
15 KOG0588 Serine/threonine prote 100.0 8.6E-37 1.9E-41 339.3 15.4 200 671-900 11-214 (786)
16 KOG0600 Cdc2-related protein k 100.0 9.2E-37 2E-41 330.6 15.1 204 668-900 113-322 (560)
17 KOG0597 Serine-threonine prote 100.0 7.9E-37 1.7E-41 332.7 13.9 198 672-900 2-202 (808)
18 KOG0192 Tyrosine kinase specif 100.0 1.6E-35 3.6E-40 327.9 19.4 206 667-902 36-250 (362)
19 KOG0585 Ca2+/calmodulin-depend 100.0 6.5E-36 1.4E-40 321.1 15.5 209 666-899 91-320 (576)
20 KOG0661 MAPK related serine/th 100.0 1.2E-36 2.5E-41 327.5 9.6 202 668-901 6-213 (538)
21 KOG0582 Ste20-like serine/thre 100.0 4.1E-35 8.8E-40 313.4 19.8 211 665-900 19-234 (516)
22 KOG0580 Serine/threonine prote 100.0 2.7E-36 5.9E-41 299.2 9.9 205 668-901 18-225 (281)
23 KOG0690 Serine/threonine prote 100.0 8.6E-36 1.9E-40 305.3 11.4 207 665-900 161-370 (516)
24 KOG0659 Cdk activating kinase 100.0 5.7E-35 1.2E-39 293.6 16.0 200 672-901 2-205 (318)
25 cd05628 STKc_NDR1 Catalytic do 100.0 3.6E-34 7.9E-39 323.8 21.5 227 672-900 1-238 (363)
26 KOG0198 MEKK and related serin 100.0 7.5E-35 1.6E-39 313.2 15.0 202 671-900 16-224 (313)
27 PTZ00263 protein kinase A cata 100.0 3.9E-34 8.5E-39 319.1 19.2 200 669-900 15-217 (329)
28 KOG0663 Protein kinase PITSLRE 100.0 1.3E-34 2.9E-39 299.0 13.3 201 670-900 74-280 (419)
29 KOG0667 Dual-specificity tyros 100.0 2.8E-34 6.1E-39 322.9 16.4 193 673-900 187-390 (586)
30 cd05599 STKc_NDR_like Catalyti 100.0 6.4E-34 1.4E-38 321.9 19.2 227 672-900 1-241 (364)
31 cd05612 STKc_PRKX_like Catalyt 100.0 6.1E-34 1.3E-38 311.9 17.9 197 672-900 1-200 (291)
32 cd05626 STKc_LATS2 Catalytic d 100.0 1.3E-33 2.8E-38 321.3 21.0 226 673-900 2-250 (381)
33 cd05598 STKc_LATS Catalytic do 100.0 7.5E-34 1.6E-38 322.8 18.7 227 672-900 1-246 (376)
34 KOG0599 Phosphorylase kinase g 100.0 1.2E-34 2.7E-39 290.8 10.5 200 671-900 16-230 (411)
35 cd05625 STKc_LATS1 Catalytic d 100.0 1.5E-33 3.2E-38 321.1 20.8 226 673-900 2-250 (382)
36 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-33 2.3E-38 321.7 19.2 226 672-899 1-249 (377)
37 PTZ00426 cAMP-dependent protei 100.0 1.1E-33 2.5E-38 316.5 19.1 201 668-900 26-230 (340)
38 KOG0578 p21-activated serine/t 100.0 3E-34 6.6E-39 316.5 14.0 206 659-899 262-470 (550)
39 cd05621 STKc_ROCK2 Catalytic d 100.0 8.2E-34 1.8E-38 321.3 17.9 203 669-900 40-249 (370)
40 cd05631 STKc_GRK4 Catalytic do 100.0 2.5E-33 5.4E-38 306.0 20.8 200 673-900 1-203 (285)
41 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.6E-33 3.4E-38 314.7 19.5 197 672-900 1-200 (333)
42 KOG0594 Protein kinase PCTAIRE 100.0 1.3E-33 2.8E-38 298.2 17.1 202 671-901 10-224 (323)
43 cd05622 STKc_ROCK1 Catalytic d 100.0 1.7E-33 3.7E-38 318.9 19.4 204 668-900 39-249 (371)
44 cd05571 STKc_PKB Catalytic dom 100.0 1.8E-33 3.8E-38 313.0 19.0 193 678-899 1-196 (323)
45 cd05596 STKc_ROCK Catalytic do 100.0 2.3E-33 4.9E-38 317.9 18.7 204 668-900 39-249 (370)
46 KOG0612 Rho-associated, coiled 100.0 1.2E-34 2.6E-39 338.2 8.1 206 668-901 71-284 (1317)
47 cd05627 STKc_NDR2 Catalytic do 100.0 2.6E-33 5.6E-38 316.5 18.2 227 672-900 1-238 (360)
48 KOG0032 Ca2+/calmodulin-depend 100.0 5.7E-33 1.2E-37 310.2 20.1 202 670-902 33-242 (382)
49 cd05595 STKc_PKB_beta Catalyti 100.0 6.3E-33 1.4E-37 308.5 20.4 193 678-899 1-196 (323)
50 cd05593 STKc_PKB_gamma Catalyt 100.0 7E-33 1.5E-37 308.8 20.4 193 678-899 1-196 (328)
51 KOG0660 Mitogen-activated prot 100.0 1.7E-33 3.6E-38 296.0 14.2 201 671-900 21-230 (359)
52 cd05597 STKc_DMPK_like Catalyt 100.0 5.9E-33 1.3E-37 309.9 19.5 202 672-900 1-210 (331)
53 cd05585 STKc_YPK1_like Catalyt 100.0 7.9E-33 1.7E-37 306.2 19.7 192 680-900 1-195 (312)
54 KOG0033 Ca2+/calmodulin-depend 100.0 6.6E-35 1.4E-39 289.0 2.5 200 670-900 9-214 (355)
55 KOG0986 G protein-coupled rece 100.0 7.3E-34 1.6E-38 303.3 10.6 206 667-900 180-388 (591)
56 cd05624 STKc_MRCK_beta Catalyt 100.0 6.8E-33 1.5E-37 309.4 17.8 202 672-900 1-210 (331)
57 cd05587 STKc_cPKC Catalytic do 100.0 1.7E-32 3.6E-37 305.3 20.7 198 673-899 1-202 (324)
58 KOG0589 Serine/threonine prote 100.0 1.6E-33 3.4E-38 310.0 12.0 202 671-900 3-208 (426)
59 cd05616 STKc_cPKC_beta Catalyt 100.0 1.7E-32 3.8E-37 305.0 19.9 199 673-900 1-203 (323)
60 KOG4717 Serine/threonine prote 100.0 5.8E-33 1.3E-37 298.8 15.0 201 671-901 17-222 (864)
61 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-32 4E-37 305.0 19.4 197 674-900 1-203 (324)
62 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.7E-33 1.4E-37 311.7 16.0 227 672-900 1-232 (350)
63 cd05588 STKc_aPKC Catalytic do 100.0 2.2E-32 4.8E-37 305.0 19.6 193 678-899 1-197 (329)
64 cd05594 STKc_PKB_alpha Catalyt 100.0 1.2E-32 2.7E-37 306.5 17.5 193 678-899 1-197 (325)
65 cd05623 STKc_MRCK_alpha Cataly 100.0 1.7E-32 3.6E-37 306.4 18.4 202 672-900 1-210 (332)
66 cd05592 STKc_nPKC_theta_delta 100.0 3.1E-32 6.7E-37 302.0 19.8 193 678-899 1-197 (316)
67 cd05591 STKc_nPKC_epsilon Cata 100.0 2.9E-32 6.3E-37 303.0 19.1 194 678-900 1-198 (321)
68 cd05615 STKc_cPKC_alpha Cataly 100.0 3.9E-32 8.4E-37 302.2 19.9 199 673-900 1-203 (323)
69 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-32 2.5E-37 307.3 15.5 202 672-900 1-211 (330)
70 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.8E-32 1E-36 298.6 20.2 199 671-900 4-206 (303)
71 cd05618 STKc_aPKC_iota Catalyt 100.0 4.3E-32 9.3E-37 302.7 20.0 193 678-899 1-197 (329)
72 KOG0193 Serine/threonine prote 100.0 5.7E-33 1.2E-37 306.8 12.7 205 665-900 385-595 (678)
73 cd05590 STKc_nPKC_eta Catalyti 100.0 3.7E-32 7.9E-37 302.0 19.2 194 678-900 1-198 (320)
74 cd05614 STKc_MSK2_N N-terminal 100.0 3.9E-32 8.5E-37 303.3 19.3 199 673-899 1-208 (332)
75 KOG0201 Serine/threonine prote 100.0 1.8E-33 4E-38 300.9 8.0 198 672-900 13-213 (467)
76 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.2E-32 1.1E-36 296.1 19.5 199 671-900 4-206 (288)
77 cd05575 STKc_SGK Catalytic dom 100.0 4.1E-32 9E-37 302.0 19.0 193 678-899 1-197 (323)
78 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-32 2.7E-37 303.6 14.1 207 664-901 198-408 (468)
79 cd07848 STKc_CDKL5 Catalytic d 100.0 6E-32 1.3E-36 295.0 19.3 200 672-900 1-203 (287)
80 cd05605 STKc_GRK4_like Catalyt 100.0 8.5E-32 1.8E-36 294.0 20.5 200 673-900 1-203 (285)
81 cd05102 PTKc_VEGFR3 Catalytic 100.0 5.6E-32 1.2E-36 302.8 19.5 206 668-900 3-279 (338)
82 KOG0658 Glycogen synthase kina 100.0 4.1E-33 8.9E-38 293.5 9.5 193 673-901 25-229 (364)
83 cd05603 STKc_SGK2 Catalytic do 100.0 5.1E-32 1.1E-36 301.0 18.8 193 678-899 1-197 (321)
84 cd05617 STKc_aPKC_zeta Catalyt 100.0 6E-32 1.3E-36 301.2 19.3 193 678-899 1-197 (327)
85 cd05602 STKc_SGK1 Catalytic do 100.0 6.4E-32 1.4E-36 300.7 19.0 193 678-899 1-197 (325)
86 KOG0696 Serine/threonine prote 100.0 3.9E-33 8.4E-38 293.4 8.6 206 666-900 343-552 (683)
87 cd05604 STKc_SGK3 Catalytic do 100.0 5.2E-32 1.1E-36 301.5 18.2 194 678-900 1-198 (325)
88 KOG0608 Warts/lats-like serine 100.0 2.4E-32 5.1E-37 300.3 15.0 231 668-900 625-873 (1034)
89 KOG4721 Serine/threonine prote 100.0 5.7E-33 1.2E-37 302.2 10.0 193 667-901 119-314 (904)
90 cd05608 STKc_GRK1 Catalytic do 100.0 1.3E-31 2.8E-36 291.7 20.8 194 680-900 1-199 (280)
91 cd05620 STKc_nPKC_delta Cataly 100.0 8.4E-32 1.8E-36 298.6 19.6 193 678-899 1-197 (316)
92 cd05584 STKc_p70S6K Catalytic 100.0 8.5E-32 1.8E-36 299.5 19.4 195 677-900 1-202 (323)
93 cd06649 PKc_MEK2 Catalytic dom 100.0 2.7E-31 5.8E-36 296.5 23.3 198 669-899 2-203 (331)
94 PHA03212 serine/threonine kina 100.0 1.5E-31 3.3E-36 304.6 21.4 192 669-898 89-283 (391)
95 KOG0607 MAP kinase-interacting 100.0 1.9E-32 4.2E-37 280.6 12.5 201 678-903 84-296 (463)
96 cd05619 STKc_nPKC_theta Cataly 100.0 1.3E-31 2.9E-36 296.9 20.0 193 678-899 1-197 (316)
97 PLN00034 mitogen-activated pro 100.0 1.3E-31 2.8E-36 301.8 19.9 197 668-899 70-274 (353)
98 KOG1989 ARK protein kinase fam 100.0 3.8E-32 8.2E-37 315.0 15.8 212 669-901 34-261 (738)
99 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.3E-31 2.9E-36 299.4 19.9 199 673-899 1-209 (338)
100 KOG0586 Serine/threonine prote 100.0 5.3E-32 1.1E-36 301.3 16.2 203 667-900 51-257 (596)
101 KOG1187 Serine/threonine prote 100.0 8.9E-32 1.9E-36 300.2 18.0 199 671-900 74-280 (361)
102 KOG0614 cGMP-dependent protein 100.0 2E-33 4.3E-38 302.7 3.9 203 668-900 416-621 (732)
103 cd05570 STKc_PKC Catalytic dom 100.0 1.7E-31 3.8E-36 296.3 19.6 193 678-899 1-197 (318)
104 PRK13184 pknD serine/threonine 100.0 4.6E-31 1E-35 317.5 24.3 221 671-900 1-233 (932)
105 cd05607 STKc_GRK7 Catalytic do 100.0 3.2E-31 6.8E-36 288.2 20.9 193 680-900 1-196 (277)
106 KOG4236 Serine/threonine prote 100.0 2.3E-32 4.9E-37 295.0 10.2 195 677-901 569-769 (888)
107 cd05630 STKc_GRK6 Catalytic do 100.0 5.2E-31 1.1E-35 287.8 21.2 200 673-900 1-203 (285)
108 cd05632 STKc_GRK5 Catalytic do 100.0 6.8E-31 1.5E-35 286.8 21.7 200 673-900 1-203 (285)
109 PTZ00267 NIMA-related protein 100.0 6.1E-31 1.3E-35 307.8 22.7 202 671-900 66-273 (478)
110 KOG4250 TANK binding protein k 100.0 5.6E-32 1.2E-36 304.6 13.2 199 673-901 14-227 (732)
111 cd06650 PKc_MEK1 Catalytic dom 100.0 7.4E-31 1.6E-35 293.2 22.2 199 669-900 2-204 (333)
112 cd05586 STKc_Sck1_like Catalyt 100.0 1.1E-31 2.4E-36 299.5 15.4 192 680-900 1-199 (330)
113 KOG0574 STE20-like serine/thre 100.0 4E-33 8.7E-38 282.9 3.1 196 673-901 34-232 (502)
114 KOG0577 Serine/threonine prote 100.0 2.1E-32 4.7E-37 298.8 8.8 193 673-898 27-225 (948)
115 KOG2345 Serine/threonine prote 100.0 5.5E-32 1.2E-36 269.6 10.9 214 668-902 17-245 (302)
116 cd07862 STKc_CDK6 Catalytic do 100.0 5.9E-31 1.3E-35 287.6 20.2 199 672-900 1-211 (290)
117 KOG0695 Serine/threonine prote 100.0 4.5E-32 9.7E-37 278.7 10.5 208 665-901 243-454 (593)
118 cd07876 STKc_JNK2 Catalytic do 100.0 7.7E-31 1.7E-35 296.2 21.2 195 671-899 20-223 (359)
119 cd05582 STKc_RSK_N N-terminal 100.0 2E-31 4.2E-36 295.9 15.5 193 678-900 2-200 (318)
120 KOG0604 MAP kinase-activated p 100.0 7.8E-32 1.7E-36 274.5 10.4 194 671-900 60-265 (400)
121 PTZ00283 serine/threonine prot 100.0 1.2E-30 2.7E-35 305.6 21.7 205 669-899 29-246 (496)
122 KOG0579 Ste20-like serine/thre 100.0 2.6E-32 5.7E-37 299.3 6.2 197 672-899 32-236 (1187)
123 cd05574 STKc_phototropin_like 100.0 3.5E-30 7.6E-35 285.4 23.0 228 672-899 1-233 (316)
124 PTZ00036 glycogen synthase kin 100.0 1.5E-30 3.2E-35 301.2 20.7 195 670-900 64-273 (440)
125 cd07853 STKc_NLK Catalytic dom 100.0 1.2E-30 2.7E-35 296.0 19.4 197 673-899 1-206 (372)
126 cd05096 PTKc_DDR1 Catalytic do 100.0 2.5E-30 5.5E-35 284.9 21.2 205 669-900 2-244 (304)
127 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.1E-30 4.5E-35 286.3 20.3 200 670-900 4-207 (309)
128 PTZ00266 NIMA-related protein 100.0 2.3E-30 5E-35 312.5 22.2 203 668-899 9-244 (1021)
129 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-30 4.1E-35 293.6 20.0 195 671-899 23-226 (364)
130 cd05580 STKc_PKA Catalytic dom 100.0 3.8E-30 8.3E-35 281.5 21.7 197 672-900 1-200 (290)
131 cd05106 PTKc_CSF-1R Catalytic 100.0 1.6E-30 3.6E-35 294.9 19.4 206 668-900 34-317 (374)
132 KOG0596 Dual specificity; seri 100.0 6.3E-31 1.4E-35 287.2 15.2 204 669-902 358-576 (677)
133 cd07874 STKc_JNK3 Catalytic do 100.0 2E-30 4.4E-35 292.3 19.7 196 670-899 15-219 (355)
134 cd07863 STKc_CDK4 Catalytic do 100.0 2.3E-30 5E-35 282.6 19.5 197 673-899 1-208 (288)
135 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-30 3.3E-35 291.9 17.9 194 671-899 14-217 (343)
136 cd05104 PTKc_Kit Catalytic dom 100.0 3.8E-30 8.1E-35 292.1 20.1 206 668-900 31-319 (375)
137 cd08529 STKc_FA2-like Catalyti 100.0 9E-30 1.9E-34 272.5 21.8 200 673-900 1-203 (256)
138 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.8E-30 1.5E-34 275.9 20.4 203 669-900 2-211 (266)
139 PHA02988 hypothetical protein; 100.0 6E-30 1.3E-34 279.2 19.8 190 678-901 26-225 (283)
140 cd06645 STKc_MAP4K3 Catalytic 100.0 5.9E-30 1.3E-34 276.2 19.1 197 671-899 8-210 (267)
141 cd08219 STKc_Nek3 Catalytic do 100.0 9.4E-30 2E-34 272.6 20.5 199 673-900 1-202 (255)
142 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.8E-30 2.1E-34 290.2 21.8 207 667-900 32-342 (400)
143 cd06619 PKc_MKK5 Catalytic dom 100.0 1.5E-29 3.1E-34 275.3 22.1 192 672-900 1-195 (279)
144 cd06646 STKc_MAP4K5 Catalytic 100.0 1.1E-29 2.4E-34 273.9 21.0 198 671-900 8-211 (267)
145 KOG0194 Protein tyrosine kinas 100.0 1.3E-30 2.8E-35 292.3 14.1 209 664-901 149-366 (474)
146 cd08228 STKc_Nek6 Catalytic do 100.0 1E-29 2.2E-34 274.1 20.6 202 672-900 2-208 (267)
147 cd06625 STKc_MEKK3_like Cataly 100.0 1.7E-29 3.7E-34 271.6 22.2 203 672-900 2-209 (263)
148 PHA03207 serine/threonine kina 100.0 7.5E-30 1.6E-34 291.5 20.4 194 670-899 90-288 (392)
149 KOG4279 Serine/threonine prote 100.0 4.4E-31 9.4E-36 292.6 9.8 192 679-901 582-781 (1226)
150 cd05048 PTKc_Ror Catalytic Dom 100.0 1E-29 2.2E-34 276.7 20.5 205 669-900 2-229 (283)
151 PF00069 Pkinase: Protein kina 100.0 6.1E-30 1.3E-34 274.2 18.4 198 674-901 1-202 (260)
152 cd05052 PTKc_Abl Catalytic dom 100.0 1.3E-29 2.8E-34 273.1 20.5 202 669-900 3-208 (263)
153 cd06615 PKc_MEK Catalytic doma 100.0 2.4E-29 5.3E-34 277.8 23.2 195 672-899 1-199 (308)
154 KOG0584 Serine/threonine prote 100.0 9.2E-31 2E-35 291.6 11.1 195 675-900 43-245 (632)
155 cd07861 STKc_CDK1_euk Catalyti 100.0 1.3E-29 2.8E-34 276.1 20.0 198 673-899 1-203 (285)
156 PTZ00284 protein kinase; Provi 100.0 1.1E-29 2.4E-34 296.8 20.7 193 670-899 127-346 (467)
157 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.4E-29 3E-34 278.7 20.3 200 670-900 4-207 (301)
158 cd06644 STKc_STK10_LOK Catalyt 100.0 2.3E-29 4.9E-34 275.6 21.8 199 671-900 11-217 (292)
159 cd08227 PK_STRAD_alpha Pseudok 100.0 1.8E-29 4E-34 281.2 21.2 204 676-900 2-212 (327)
160 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-29 3.2E-34 272.0 19.5 201 669-900 3-207 (261)
161 cd06652 STKc_MEKK2 Catalytic d 100.0 3.1E-29 6.7E-34 270.3 22.0 203 672-900 2-211 (265)
162 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-29 3.1E-34 280.6 19.9 193 677-899 6-217 (317)
163 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.4E-29 7.3E-34 269.8 22.0 202 672-900 2-208 (267)
164 cd05108 PTKc_EGFR Catalytic do 100.0 1.7E-29 3.7E-34 280.0 20.2 203 669-900 4-214 (316)
165 cd08229 STKc_Nek7 Catalytic do 100.0 1.8E-29 3.9E-34 272.2 19.6 201 672-899 2-207 (267)
166 PHA03211 serine/threonine kina 100.0 2E-29 4.2E-34 291.3 21.0 193 670-898 167-362 (461)
167 cd08223 STKc_Nek4 Catalytic do 100.0 3.7E-29 7.9E-34 268.1 21.7 199 673-899 1-203 (257)
168 cd05609 STKc_MAST Catalytic do 100.0 4.7E-29 1E-33 275.0 23.0 214 672-899 1-217 (305)
169 cd05088 PTKc_Tie2 Catalytic do 100.0 2E-29 4.3E-34 277.8 20.0 202 669-900 4-226 (303)
170 cd06611 STKc_SLK_like Catalyti 100.0 2.1E-29 4.5E-34 273.9 19.6 199 671-900 4-210 (280)
171 cd08221 STKc_Nek9 Catalytic do 100.0 4.8E-29 1E-33 267.2 22.0 200 673-900 1-203 (256)
172 cd06654 STKc_PAK1 Catalytic do 100.0 3.1E-29 6.7E-34 275.4 21.0 196 672-900 20-218 (296)
173 KOG4645 MAPKKK (MAP kinase kin 100.0 1.8E-31 4E-36 315.3 3.5 205 672-902 1235-1445(1509)
174 cd05093 PTKc_TrkB Catalytic do 100.0 4.1E-29 8.8E-34 273.1 21.7 204 669-900 2-225 (288)
175 cd05054 PTKc_VEGFR Catalytic d 100.0 2E-29 4.4E-34 282.0 19.7 206 668-900 3-278 (337)
176 cd06613 STKc_MAP4K3_like Catal 100.0 6.2E-29 1.3E-33 267.0 22.1 198 672-900 3-206 (262)
177 cd05049 PTKc_Trk Catalytic dom 100.0 3E-29 6.4E-34 272.5 19.7 203 670-899 3-226 (280)
178 cd05578 STKc_Yank1 Catalytic d 100.0 1.7E-29 3.6E-34 271.2 17.2 199 673-901 1-202 (258)
179 cd06643 STKc_SLK Catalytic dom 100.0 6.2E-29 1.3E-33 270.6 21.9 196 674-900 7-210 (282)
180 cd06637 STKc_TNIK Catalytic do 100.0 3.4E-29 7.3E-34 270.9 19.6 198 672-900 6-218 (272)
181 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.4E-29 9.5E-34 267.7 20.3 199 670-900 2-204 (256)
182 PHA03209 serine/threonine kina 100.0 2.7E-29 5.8E-34 283.3 19.5 190 670-898 64-256 (357)
183 KOG1152 Signal transduction se 100.0 2.4E-30 5.3E-35 283.2 10.2 200 670-900 559-771 (772)
184 cd05090 PTKc_Ror1 Catalytic do 100.0 5.3E-29 1.1E-33 271.3 20.6 204 670-900 3-229 (283)
185 cd07847 STKc_CDKL1_4 Catalytic 100.0 5.7E-29 1.2E-33 271.0 20.8 198 672-899 1-202 (286)
186 KOG0662 Cyclin-dependent kinas 100.0 4.4E-30 9.5E-35 243.5 10.2 198 672-899 2-204 (292)
187 cd05068 PTKc_Frk_like Catalyti 100.0 7.6E-29 1.6E-33 266.7 21.3 201 669-900 3-207 (261)
188 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.2E-29 9.2E-34 272.4 19.5 197 672-899 1-208 (286)
189 KOG1026 Nerve growth factor re 100.0 5E-30 1.1E-34 295.8 12.7 208 668-902 482-710 (774)
190 cd05577 STKc_GRK Catalytic dom 100.0 5.5E-29 1.2E-33 270.4 20.1 193 680-900 1-196 (277)
191 cd06656 STKc_PAK3 Catalytic do 100.0 5.8E-29 1.3E-33 273.3 20.5 196 672-900 19-217 (297)
192 cd05062 PTKc_IGF-1R Catalytic 100.0 6.2E-29 1.3E-33 269.9 20.4 205 669-900 3-224 (277)
193 cd07839 STKc_CDK5 Catalytic do 100.0 1.9E-29 4E-34 274.8 16.4 196 673-898 1-200 (284)
194 cd05633 STKc_GRK3 Catalytic do 100.0 7.7E-29 1.7E-33 269.8 21.1 191 679-900 1-198 (279)
195 cd06628 STKc_MAPKKK_Byr2_like 100.0 9.6E-29 2.1E-33 266.5 21.5 205 673-900 1-214 (267)
196 cd05032 PTKc_InsR_like Catalyt 100.0 5.8E-29 1.3E-33 269.7 19.9 205 669-900 3-224 (277)
197 PRK13560 hypothetical protein; 100.0 4.4E-28 9.6E-33 302.7 30.7 415 169-625 181-622 (807)
198 cd06655 STKc_PAK2 Catalytic do 100.0 9E-29 2E-33 271.7 21.5 196 672-900 19-217 (296)
199 cd05071 PTKc_Src Catalytic dom 100.0 7E-29 1.5E-33 267.4 20.1 200 669-900 3-206 (262)
200 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-28 2.7E-33 265.6 22.1 203 672-900 2-211 (264)
201 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-28 2.3E-33 263.9 21.3 195 678-900 1-199 (252)
202 cd05033 PTKc_EphR Catalytic do 100.0 1E-28 2.3E-33 266.4 21.4 202 670-899 2-210 (266)
203 cd07832 STKc_CCRK Catalytic do 100.0 9.4E-29 2E-33 269.3 21.1 198 673-899 1-202 (286)
204 cd07844 STKc_PCTAIRE_like Cata 100.0 6.5E-29 1.4E-33 271.7 19.7 199 671-900 4-206 (291)
205 cd06609 STKc_MST3_like Catalyt 100.0 9.2E-29 2E-33 268.0 20.6 197 672-900 1-200 (274)
206 cd05055 PTKc_PDGFR Catalytic d 100.0 8.8E-29 1.9E-33 272.6 20.8 205 669-900 32-246 (302)
207 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9.9E-29 2.2E-33 270.3 21.0 199 671-900 4-206 (291)
208 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.7E-29 1E-33 268.0 18.1 199 671-900 5-207 (261)
209 KOG0984 Mitogen-activated prot 100.0 1.1E-29 2.3E-34 246.5 11.7 205 665-900 39-254 (282)
210 cd05053 PTKc_FGFR Catalytic do 100.0 7.3E-29 1.6E-33 271.5 19.9 208 666-900 6-237 (293)
211 cd05094 PTKc_TrkC Catalytic do 100.0 1E-28 2.2E-33 270.4 20.7 203 670-900 3-228 (291)
212 cd06651 STKc_MEKK3 Catalytic d 100.0 1.6E-28 3.4E-33 265.1 21.9 203 672-900 2-211 (266)
213 cd05059 PTKc_Tec_like Catalyti 100.0 7.4E-29 1.6E-33 266.0 19.2 198 671-900 3-204 (256)
214 cd08220 STKc_Nek8 Catalytic do 100.0 1.6E-28 3.5E-33 262.8 21.5 199 673-900 1-203 (256)
215 cd07867 STKc_CDC2L6 Catalytic 100.0 7.7E-29 1.7E-33 274.6 19.5 192 678-899 7-217 (317)
216 cd05082 PTKc_Csk Catalytic dom 100.0 9.5E-29 2.1E-33 265.1 19.6 195 669-900 3-202 (256)
217 cd05109 PTKc_HER2 Catalytic do 100.0 1.3E-28 2.9E-33 267.5 21.0 203 669-900 4-214 (279)
218 cd05113 PTKc_Btk_Bmx Catalytic 100.0 7.7E-29 1.7E-33 266.1 18.9 199 670-900 2-204 (256)
219 cd06631 STKc_YSK4 Catalytic do 100.0 1.4E-28 3E-33 265.1 20.8 204 673-900 1-210 (265)
220 cd05111 PTK_HER3 Pseudokinase 100.0 1.3E-28 2.8E-33 268.0 20.7 203 669-900 4-214 (279)
221 cd05092 PTKc_TrkA Catalytic do 100.0 1.2E-28 2.7E-33 268.1 20.6 204 669-900 2-227 (280)
222 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-28 3.3E-33 264.5 21.0 204 672-900 1-209 (267)
223 cd05066 PTKc_EphR_A Catalytic 100.0 1.3E-28 2.9E-33 265.8 20.5 204 670-900 2-212 (267)
224 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-28 2.4E-33 265.3 19.6 200 669-900 3-206 (260)
225 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-28 3.7E-33 267.3 21.3 199 673-900 4-212 (283)
226 cd07860 STKc_CDK2_3 Catalytic 100.0 7.8E-29 1.7E-33 269.9 18.5 198 673-899 1-202 (284)
227 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.3E-29 1.4E-33 270.8 17.7 198 672-899 1-202 (286)
228 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.3E-28 2.9E-33 267.4 20.1 205 669-900 3-224 (277)
229 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-28 3.7E-33 262.9 20.6 199 673-899 1-202 (256)
230 cd05091 PTKc_Ror2 Catalytic do 100.0 8.9E-29 1.9E-33 269.4 18.7 205 669-900 2-229 (283)
231 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.6E-28 3.4E-33 265.5 20.4 196 678-900 1-212 (269)
232 cd07841 STKc_CDK7 Catalytic do 100.0 1.1E-28 2.4E-33 270.7 19.5 198 673-899 1-204 (298)
233 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.4E-28 3E-33 267.8 20.1 199 671-900 15-228 (282)
234 KOG0983 Mitogen-activated prot 100.0 1.2E-29 2.6E-34 255.4 10.6 200 669-900 89-296 (391)
235 cd05042 PTKc_Aatyk Catalytic d 100.0 1.4E-28 3.1E-33 265.8 20.0 197 678-901 1-213 (269)
236 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.3E-28 2.9E-33 271.7 20.1 205 669-900 15-245 (307)
237 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.8E-28 4E-33 266.7 20.8 198 672-900 1-209 (283)
238 cd06630 STKc_MEKK1 Catalytic d 100.0 1.4E-28 3E-33 265.3 19.7 203 673-900 1-210 (268)
239 cd05051 PTKc_DDR Catalytic dom 100.0 1.8E-28 3.9E-33 268.7 20.9 204 670-900 3-236 (296)
240 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.3E-28 2.9E-33 264.6 19.4 200 669-900 3-206 (260)
241 cd05061 PTKc_InsR Catalytic do 100.0 2E-28 4.4E-33 267.6 21.1 206 668-900 2-224 (288)
242 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.7E-28 3.6E-33 280.0 21.0 207 667-900 32-344 (401)
243 cd05606 STKc_beta_ARK Catalyti 100.0 2E-28 4.2E-33 266.4 20.6 192 679-901 1-199 (278)
244 KOG1151 Tousled-like protein k 100.0 1.3E-29 2.8E-34 268.7 10.8 208 671-900 462-686 (775)
245 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-28 3.9E-33 265.0 19.9 199 671-900 5-220 (275)
246 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.4E-28 3E-33 268.3 19.2 198 670-900 3-204 (284)
247 cd05089 PTKc_Tie1 Catalytic do 100.0 2.2E-28 4.8E-33 268.6 20.9 199 672-900 2-221 (297)
248 cd06612 STKc_MST1_2 Catalytic 100.0 2.2E-28 4.7E-33 261.7 20.2 196 672-900 3-201 (256)
249 cd05065 PTKc_EphR_B Catalytic 100.0 2.3E-28 4.9E-33 264.2 20.4 205 671-900 3-214 (269)
250 cd05116 PTKc_Syk Catalytic dom 100.0 2.8E-28 6E-33 261.7 21.0 194 679-900 2-201 (257)
251 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.7E-28 3.6E-33 275.4 20.1 205 669-900 4-284 (343)
252 cd05097 PTKc_DDR_like Catalyti 100.0 1.8E-28 3.9E-33 269.0 19.8 204 670-900 3-235 (295)
253 PHA03210 serine/threonine kina 100.0 1.1E-28 2.4E-33 289.8 19.4 200 671-897 147-367 (501)
254 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-28 3.2E-33 269.2 19.1 199 671-899 4-208 (293)
255 cd05572 STKc_cGK_PKG Catalytic 100.0 2.5E-28 5.4E-33 262.6 20.4 192 680-901 1-195 (262)
256 cd05034 PTKc_Src_like Catalyti 100.0 2.3E-28 5.1E-33 262.6 20.2 201 669-900 3-207 (261)
257 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.6E-28 5.6E-33 268.9 21.0 205 668-899 11-241 (304)
258 cd06638 STKc_myosinIIIA Cataly 100.0 2.4E-28 5.2E-33 266.4 20.4 200 670-900 16-231 (286)
259 cd05035 PTKc_Axl_like Catalyti 100.0 3.1E-28 6.8E-33 263.1 21.2 201 674-900 1-218 (273)
260 cd05057 PTKc_EGFR_like Catalyt 100.0 3.2E-28 6.9E-33 264.6 21.3 203 669-900 4-214 (279)
261 PLN00009 cyclin-dependent kina 100.0 2.8E-28 6.1E-33 267.1 20.9 199 672-899 2-205 (294)
262 cd06607 STKc_TAO Catalytic dom 100.0 3.8E-28 8.3E-33 268.0 22.1 195 672-899 15-215 (307)
263 cd06632 STKc_MEKK1_plant Catal 100.0 3.2E-28 7E-33 260.6 20.8 198 673-900 1-204 (258)
264 cd07833 STKc_CDKL Catalytic do 100.0 1.9E-28 4.1E-33 267.2 19.3 199 672-899 1-203 (288)
265 cd07842 STKc_CDK8_like Catalyt 100.0 1.9E-28 4.1E-33 271.1 19.5 203 673-900 1-218 (316)
266 cd06626 STKc_MEKK4 Catalytic d 100.0 5E-28 1.1E-32 260.2 22.2 202 673-900 1-208 (264)
267 cd07850 STKc_JNK Catalytic dom 100.0 2.2E-28 4.8E-33 275.5 20.3 195 671-899 15-218 (353)
268 cd05039 PTKc_Csk_like Catalyti 100.0 3.4E-28 7.3E-33 260.7 20.7 197 669-901 3-203 (256)
269 cd06640 STKc_MST4 Catalytic do 100.0 3.9E-28 8.5E-33 263.7 21.4 197 672-900 4-203 (277)
270 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.4E-28 7.3E-33 269.4 21.1 206 668-900 8-239 (314)
271 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.3E-28 7.2E-33 265.1 20.7 201 671-899 3-212 (284)
272 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.2E-28 7E-33 262.7 20.3 205 669-900 2-213 (268)
273 cd06917 STKc_NAK1_like Catalyt 100.0 3.1E-28 6.7E-33 264.2 20.2 196 673-900 2-204 (277)
274 cd05075 PTKc_Axl Catalytic dom 100.0 3.4E-28 7.5E-33 263.0 20.5 201 674-900 1-217 (272)
275 cd05069 PTKc_Yes Catalytic dom 100.0 3.2E-28 7E-33 261.7 19.9 200 669-900 3-206 (260)
276 cd00192 PTKc Catalytic domain 100.0 4E-28 8.7E-33 259.9 20.5 196 678-900 1-210 (262)
277 cd07836 STKc_Pho85 Catalytic d 100.0 3.1E-28 6.7E-33 265.1 19.8 197 673-899 1-202 (284)
278 cd05611 STKc_Rim15_like Cataly 100.0 4.2E-28 9.1E-33 260.6 20.5 190 678-900 2-195 (260)
279 cd05045 PTKc_RET Catalytic dom 100.0 3.8E-28 8.3E-33 265.6 20.5 201 673-900 1-232 (290)
280 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-28 2.9E-33 269.8 16.7 195 673-900 23-220 (292)
281 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.3E-28 1.2E-32 261.6 21.1 201 673-900 2-214 (272)
282 cd07837 STKc_CdkB_plant Cataly 100.0 3.6E-28 7.9E-33 266.2 20.0 199 672-899 1-213 (295)
283 cd05073 PTKc_Hck Catalytic dom 100.0 5.5E-28 1.2E-32 259.9 21.0 200 669-900 3-206 (260)
284 cd05613 STKc_MSK1_N N-terminal 100.0 4.6E-28 1E-32 264.9 20.7 199 673-899 1-209 (290)
285 PF07714 Pkinase_Tyr: Protein 100.0 1.9E-28 4.1E-33 263.7 17.3 200 675-901 2-209 (259)
286 cd05040 PTKc_Ack_like Catalyti 100.0 5.2E-28 1.1E-32 259.3 20.6 195 678-899 1-202 (257)
287 cd07845 STKc_CDK10 Catalytic d 100.0 3.8E-28 8.1E-33 268.3 20.0 200 670-899 5-210 (309)
288 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.4E-28 7.3E-33 265.2 19.3 200 672-898 4-212 (284)
289 cd06659 STKc_PAK6 Catalytic do 100.0 2E-28 4.3E-33 269.1 17.5 194 673-899 22-218 (297)
290 cd06639 STKc_myosinIIIB Cataly 100.0 7.8E-28 1.7E-32 263.2 22.0 199 671-900 21-235 (291)
291 cd05115 PTKc_Zap-70 Catalytic 100.0 7.1E-28 1.5E-32 258.9 21.2 194 679-900 2-201 (257)
292 KOG1094 Discoidin domain recep 100.0 7.3E-29 1.6E-33 271.7 13.6 209 667-903 533-746 (807)
293 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.1E-28 4.6E-33 265.7 17.3 196 673-900 5-203 (277)
294 cd06623 PKc_MAPKK_plant_like C 100.0 6.7E-28 1.4E-32 259.0 21.0 199 672-901 1-203 (264)
295 cd06647 STKc_PAK_I Catalytic d 100.0 4.1E-28 8.8E-33 266.1 19.6 197 671-900 18-217 (293)
296 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-27 3.4E-32 264.5 24.4 195 673-900 26-226 (317)
297 cd05095 PTKc_DDR2 Catalytic do 100.0 5.5E-28 1.2E-32 265.3 20.4 203 671-900 4-236 (296)
298 cd06605 PKc_MAPKK Catalytic do 100.0 2.6E-28 5.6E-33 262.7 17.3 197 672-900 1-201 (265)
299 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-27 2.3E-32 261.8 22.2 199 672-901 1-206 (287)
300 cd06624 STKc_ASK Catalytic dom 100.0 9.7E-28 2.1E-32 259.1 21.7 198 672-900 8-213 (268)
301 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.8E-28 1.3E-32 270.0 20.4 206 668-900 8-239 (334)
302 cd05083 PTKc_Chk Catalytic dom 100.0 4.3E-28 9.3E-33 259.7 18.6 193 670-900 4-200 (254)
303 cd08217 STKc_Nek2 Catalytic do 100.0 8.6E-28 1.9E-32 258.0 20.9 200 673-900 1-212 (265)
304 cd05060 PTKc_Syk_like Catalyti 100.0 1E-27 2.2E-32 257.2 21.3 194 678-900 1-201 (257)
305 cd07849 STKc_ERK1_2_like Catal 100.0 3.9E-28 8.4E-33 271.6 18.6 199 671-899 4-211 (336)
306 cd05050 PTKc_Musk Catalytic do 100.0 7.2E-28 1.6E-32 263.1 20.0 203 670-899 3-234 (288)
307 PHA03390 pk1 serine/threonine- 100.0 7.9E-28 1.7E-32 260.1 19.8 188 672-900 14-208 (267)
308 cd06641 STKc_MST3 Catalytic do 100.0 1E-27 2.2E-32 260.5 20.6 196 673-900 5-203 (277)
309 cd05047 PTKc_Tie Catalytic dom 100.0 1.2E-27 2.6E-32 258.8 21.1 193 678-900 1-214 (270)
310 cd07865 STKc_CDK9 Catalytic do 100.0 9E-28 1.9E-32 264.8 20.4 203 671-899 11-225 (310)
311 cd07835 STKc_CDK1_like Catalyt 100.0 6.6E-28 1.4E-32 262.5 19.0 197 674-899 1-201 (283)
312 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.3E-28 7.2E-33 261.4 16.3 188 678-900 1-208 (258)
313 cd08226 PK_STRAD_beta Pseudoki 100.0 9.6E-28 2.1E-32 267.5 20.5 202 678-900 4-212 (328)
314 cd05085 PTKc_Fer Catalytic dom 100.0 1.6E-27 3.4E-32 254.4 21.2 193 678-900 1-197 (250)
315 cd08225 STKc_Nek5 Catalytic do 100.0 7.8E-28 1.7E-32 257.6 18.9 200 673-900 1-204 (257)
316 cd05579 STKc_MAST_like Catalyt 100.0 7.7E-28 1.7E-32 258.4 18.8 199 680-899 1-202 (265)
317 PHA02882 putative serine/threo 100.0 1.3E-27 2.9E-32 262.1 20.9 210 669-901 9-236 (294)
318 cd05110 PTKc_HER4 Catalytic do 100.0 1.1E-27 2.3E-32 264.0 20.1 203 669-900 4-214 (303)
319 cd05046 PTK_CCK4 Pseudokinase 100.0 1.1E-27 2.3E-32 259.7 19.5 202 671-900 4-221 (275)
320 cd05112 PTKc_Itk Catalytic dom 100.0 1.3E-27 2.9E-32 256.0 20.0 198 670-899 2-203 (256)
321 cd05581 STKc_PDK1 Catalytic do 100.0 7.3E-28 1.6E-32 261.1 18.2 220 672-900 1-224 (280)
322 cd05043 PTK_Ryk Pseudokinase d 100.0 1.5E-27 3.2E-32 259.4 20.6 205 669-900 3-222 (280)
323 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-27 2.4E-32 260.0 19.4 187 679-900 2-224 (274)
324 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.4E-27 3.1E-32 257.3 20.0 187 678-899 1-211 (262)
325 KOG0666 Cyclin C-dependent kin 100.0 4E-29 8.8E-34 255.7 7.4 204 671-900 23-242 (438)
326 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.6E-27 3.4E-32 267.8 20.8 194 671-899 16-219 (345)
327 smart00219 TyrKc Tyrosine kina 100.0 1.6E-27 3.4E-32 255.0 19.9 198 674-899 1-206 (258)
328 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-27 4.1E-32 257.2 20.5 202 670-901 4-212 (270)
329 cd06648 STKc_PAK_II Catalytic 100.0 2.3E-27 5E-32 259.0 21.3 194 673-899 20-216 (285)
330 cd07855 STKc_ERK5 Catalytic do 100.0 5.9E-28 1.3E-32 269.9 17.0 201 672-899 5-213 (334)
331 KOG1095 Protein tyrosine kinas 100.0 4.8E-28 1E-32 289.2 16.9 206 669-901 689-908 (1025)
332 cd06616 PKc_MKK4 Catalytic dom 100.0 8.3E-28 1.8E-32 262.5 17.5 199 671-900 3-212 (288)
333 cd06614 STKc_PAK Catalytic dom 100.0 2.2E-27 4.7E-32 259.1 20.8 198 671-900 18-218 (286)
334 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-27 2.8E-32 267.5 19.4 202 671-899 6-214 (337)
335 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.6E-27 5.6E-32 256.1 21.2 194 679-899 2-210 (268)
336 cd07831 STKc_MOK Catalytic dom 100.0 2.1E-27 4.5E-32 258.1 20.5 193 674-899 1-200 (282)
337 cd06633 STKc_TAO3 Catalytic do 100.0 4.3E-27 9.4E-32 260.5 23.4 194 674-900 23-222 (313)
338 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.6E-27 3.6E-32 255.4 19.3 187 678-901 1-210 (259)
339 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.7E-27 3.6E-32 267.3 20.1 194 671-899 14-217 (343)
340 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.6E-27 3.4E-32 259.3 19.3 203 671-900 3-214 (284)
341 cd05610 STKc_MASTL Catalytic d 100.0 2.9E-27 6.2E-32 286.6 23.5 151 671-823 3-153 (669)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-27 2.3E-32 268.2 18.1 197 672-899 5-210 (337)
343 cd08215 STKc_Nek Catalytic dom 100.0 3.5E-27 7.6E-32 252.0 21.2 200 673-900 1-205 (258)
344 cd05122 PKc_STE Catalytic doma 100.0 4.1E-27 8.8E-32 250.3 21.4 197 673-901 1-200 (253)
345 cd07840 STKc_CDK9_like Catalyt 100.0 2E-27 4.3E-32 258.7 19.4 197 674-899 1-203 (287)
346 KOG1006 Mitogen-activated prot 100.0 2.9E-29 6.2E-34 252.0 4.5 202 668-900 60-271 (361)
347 cd06627 STKc_Cdc7_like Catalyt 100.0 5.6E-27 1.2E-31 250.2 22.3 198 673-900 1-201 (254)
348 cd05041 PTKc_Fes_like Catalyti 100.0 3.6E-27 7.9E-32 251.8 20.8 194 678-900 1-198 (251)
349 KOG0671 LAMMER dual specificit 100.0 8.3E-29 1.8E-33 261.1 7.8 195 671-900 88-311 (415)
350 cd05044 PTKc_c-ros Catalytic d 100.0 1.5E-27 3.3E-32 257.5 17.5 196 678-900 1-216 (269)
351 cd08216 PK_STRAD Pseudokinase 100.0 3.2E-27 7E-32 261.3 20.5 196 684-900 12-212 (314)
352 cd05058 PTKc_Met_Ron Catalytic 100.0 4.2E-27 9.2E-32 253.0 20.7 196 678-899 1-204 (262)
353 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3E-27 6.5E-32 263.5 20.2 195 670-899 8-207 (328)
354 cd07864 STKc_CDK12 Catalytic d 99.9 2.3E-27 5E-32 260.7 18.6 202 670-900 5-220 (302)
355 KOG1035 eIF-2alpha kinase GCN2 99.9 2.7E-28 5.8E-33 287.6 11.2 208 671-894 478-814 (1351)
356 cd07857 STKc_MPK1 Catalytic do 99.9 4E-27 8.6E-32 263.0 20.1 201 673-900 1-212 (332)
357 cd06657 STKc_PAK4 Catalytic do 99.9 4.1E-27 8.8E-32 258.1 19.8 193 674-899 22-217 (292)
358 cd07866 STKc_BUR1 Catalytic do 99.9 2.7E-27 5.8E-32 261.1 18.5 210 671-899 7-228 (311)
359 cd06606 STKc_MAPKKK Catalytic 99.9 7.6E-27 1.6E-31 249.3 21.3 201 673-901 1-206 (260)
360 cd05074 PTKc_Tyro3 Catalytic d 99.9 4.5E-27 9.7E-32 254.4 19.7 201 674-900 1-218 (273)
361 cd06634 STKc_TAO2 Catalytic do 99.9 5E-27 1.1E-31 259.4 20.3 196 672-900 15-216 (308)
362 cd07838 STKc_CDK4_6_like Catal 99.9 6.5E-27 1.4E-31 254.8 20.8 197 674-900 1-208 (287)
363 cd05583 STKc_MSK_N N-terminal 99.9 4E-27 8.6E-32 257.2 19.1 199 673-899 1-209 (288)
364 cd07830 STKc_MAK_like Catalyti 99.9 3.3E-27 7.2E-32 256.8 18.3 196 674-900 1-201 (283)
365 cd06618 PKc_MKK7 Catalytic dom 99.9 6.4E-27 1.4E-31 256.8 20.3 202 667-900 10-220 (296)
366 cd08530 STKc_CNK2-like Catalyt 99.9 5.4E-27 1.2E-31 250.8 19.1 197 673-899 1-202 (256)
367 cd05123 STKc_AGC Catalytic dom 99.9 7.3E-27 1.6E-31 249.0 19.9 192 680-900 1-195 (250)
368 cd07879 STKc_p38delta_MAPK13 C 99.9 4.3E-27 9.4E-32 263.8 18.3 193 671-899 14-216 (342)
369 cd08528 STKc_Nek10 Catalytic d 99.9 8.3E-27 1.8E-31 251.8 19.9 200 673-900 1-215 (269)
370 cd07834 STKc_MAPK Catalytic do 99.9 3.1E-27 6.7E-32 263.4 17.0 199 673-899 1-208 (330)
371 PTZ00024 cyclin-dependent prot 99.9 6.8E-27 1.5E-31 261.4 19.8 213 671-899 7-235 (335)
372 cd07854 STKc_MAPK4_6 Catalytic 99.9 4.8E-27 1E-31 263.5 17.9 198 671-899 4-220 (342)
373 cd07851 STKc_p38 Catalytic dom 99.9 3.8E-27 8.3E-32 264.4 16.5 194 671-899 14-217 (343)
374 cd05118 STKc_CMGC Catalytic do 99.9 7.5E-27 1.6E-31 253.8 17.2 196 674-899 1-200 (283)
375 KOG0587 Traf2- and Nck-interac 99.9 5.9E-27 1.3E-31 268.7 16.9 199 671-900 18-230 (953)
376 cd05576 STKc_RPK118_like Catal 99.9 1.2E-26 2.7E-31 246.1 17.5 178 683-900 4-184 (237)
377 KOG3653 Transforming growth fa 99.9 3E-27 6.6E-32 254.9 12.5 188 671-894 209-420 (534)
378 cd07829 STKc_CDK_like Catalyti 99.9 1.4E-26 3E-31 251.6 17.9 197 674-900 1-201 (282)
379 KOG2052 Activin A type IB rece 99.9 5.6E-27 1.2E-31 251.0 14.0 189 671-893 210-421 (513)
380 KOG4278 Protein tyrosine kinas 99.9 3.9E-27 8.5E-32 258.4 12.4 207 665-901 260-470 (1157)
381 KOG0196 Tyrosine kinase, EPH ( 99.9 2E-27 4.3E-32 268.4 8.5 206 665-899 622-836 (996)
382 cd08222 STKc_Nek11 Catalytic d 99.9 2.5E-26 5.4E-31 246.8 16.2 199 673-899 1-206 (260)
383 KOG0603 Ribosomal protein S6 k 99.9 9.6E-27 2.1E-31 260.9 13.3 191 670-900 320-515 (612)
384 PRK09776 putative diguanylate 99.9 1.8E-26 3.9E-31 297.6 16.1 374 181-601 272-663 (1092)
385 KOG4257 Focal adhesion tyrosin 99.9 3.3E-26 7.2E-31 252.0 15.5 204 670-903 387-598 (974)
386 KOG0668 Casein kinase II, alph 99.9 5.4E-27 1.2E-31 230.8 8.2 192 670-900 36-235 (338)
387 KOG0664 Nemo-like MAPK-related 99.9 5.4E-28 1.2E-32 242.9 0.2 198 673-900 54-260 (449)
388 KOG0669 Cyclin T-dependent kin 99.9 6.9E-28 1.5E-32 240.0 -0.0 205 669-899 14-230 (376)
389 KOG0199 ACK and related non-re 99.9 2.3E-26 5E-31 256.3 11.1 205 669-900 107-318 (1039)
390 KOG0670 U4/U6-associated splic 99.9 1E-26 2.2E-31 251.7 6.4 201 670-904 430-641 (752)
391 PLN03225 Serine/threonine-prot 99.9 1.8E-25 3.8E-30 264.6 17.4 199 668-899 128-380 (566)
392 KOG1290 Serine/threonine prote 99.9 3.1E-25 6.8E-30 239.7 17.5 141 663-808 69-222 (590)
393 TIGR02040 PpsR-CrtJ transcript 99.9 2.1E-25 4.6E-30 259.0 16.2 360 198-596 2-368 (442)
394 KOG1345 Serine/threonine kinas 99.9 4.4E-26 9.5E-31 229.7 5.8 193 671-900 23-227 (378)
395 smart00221 STYKc Protein kinas 99.9 3.5E-24 7.5E-29 223.9 19.9 198 674-900 1-202 (225)
396 PLN03224 probable serine/threo 99.9 2.2E-24 4.8E-29 249.1 20.2 206 668-899 141-434 (507)
397 PLN00113 leucine-rich repeat r 99.9 1.2E-24 2.6E-29 277.0 19.2 183 673-899 691-879 (968)
398 KOG0665 Jun-N-terminal kinase 99.9 1.7E-25 3.6E-30 231.1 8.3 195 671-900 16-219 (369)
399 KOG1027 Serine/threonine prote 99.9 4.8E-25 1E-29 252.0 7.1 195 674-901 511-718 (903)
400 KOG1167 Serine/threonine prote 99.9 1.3E-24 2.9E-29 232.7 8.9 221 670-900 34-280 (418)
401 smart00220 S_TKc Serine/Threon 99.9 2E-23 4.4E-28 220.1 17.8 185 684-900 1-188 (244)
402 KOG0576 Mitogen-activated prot 99.9 4E-25 8.6E-30 246.3 1.0 195 671-897 14-214 (829)
403 PRK13560 hypothetical protein; 99.9 3.9E-23 8.4E-28 258.2 18.7 381 182-599 57-472 (807)
404 KOG0200 Fibroblast/platelet-de 99.9 5E-23 1.1E-27 246.0 17.9 207 666-900 290-524 (609)
405 KOG1025 Epidermal growth facto 99.9 7.5E-24 1.6E-28 240.2 10.1 199 673-900 697-903 (1177)
406 PRK09188 serine/threonine prot 99.9 1.8E-22 3.9E-27 224.0 17.4 174 669-874 15-193 (365)
407 KOG1163 Casein kinase (serine/ 99.9 1.4E-22 3.1E-27 201.3 11.1 208 667-901 10-224 (341)
408 cd00180 PKc Catalytic domain o 99.9 2.5E-21 5.3E-26 198.8 20.3 182 680-891 1-187 (215)
409 KOG1165 Casein kinase (serine/ 99.9 5.2E-22 1.1E-26 205.7 14.8 207 668-901 24-239 (449)
410 KOG1164 Casein kinase (serine/ 99.9 3.9E-21 8.6E-26 213.4 19.5 209 673-902 19-241 (322)
411 PRK11359 cyclic-di-GMP phospho 99.9 8.6E-21 1.9E-25 237.0 23.2 240 191-596 11-255 (799)
412 TIGR02938 nifL_nitrog nitrogen 99.9 1.1E-21 2.4E-26 230.4 12.8 245 191-599 3-258 (494)
413 cd05147 RIO1_euk RIO kinase fa 99.8 3.5E-20 7.5E-25 189.3 13.0 142 677-824 2-167 (190)
414 COG0515 SPS1 Serine/threonine 99.8 6.9E-19 1.5E-23 192.7 21.1 204 674-901 2-214 (384)
415 PRK10359 lipopolysaccharide co 99.8 1.3E-19 2.8E-24 187.4 12.2 143 669-824 28-184 (232)
416 KOG1024 Receptor-like protein 99.8 2.5E-19 5.5E-24 189.0 13.6 207 668-901 280-502 (563)
417 cd05145 RIO1_like RIO kinase f 99.8 5.4E-19 1.2E-23 180.9 15.8 142 677-825 2-168 (190)
418 PLN00181 protein SPA1-RELATED; 99.8 5.4E-20 1.2E-24 228.5 9.7 171 729-901 29-218 (793)
419 PRK12274 serine/threonine prot 99.8 2.4E-18 5.2E-23 174.2 14.0 195 675-898 5-207 (218)
420 KOG0603 Ribosomal protein S6 k 99.8 5.5E-20 1.2E-24 206.8 0.7 188 679-900 1-193 (612)
421 PRK10345 hypothetical protein; 99.8 7.2E-18 1.6E-22 174.0 15.0 137 676-823 6-159 (210)
422 KOG0590 Checkpoint kinase and 99.7 3.4E-19 7.3E-24 210.5 3.3 203 675-903 321-530 (601)
423 smart00090 RIO RIO-like kinase 99.7 4E-17 8.7E-22 172.5 12.9 146 673-825 29-199 (237)
424 KOG1166 Mitotic checkpoint ser 99.7 2E-17 4.2E-22 198.9 10.9 195 668-896 694-901 (974)
425 KOG4158 BRPK/PTEN-induced prot 99.7 2.3E-17 5E-22 174.7 9.1 208 668-900 153-459 (598)
426 smart00750 KIND kinase non-cat 99.7 5.1E-17 1.1E-21 163.8 10.5 103 757-900 1-106 (176)
427 PRK14879 serine/threonine prot 99.7 4.3E-16 9.3E-21 162.2 16.1 137 678-823 2-143 (211)
428 PF14531 Kinase-like: Kinase-l 99.7 3E-16 6.6E-21 167.2 11.1 198 673-901 13-253 (288)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 9.6E-16 2.1E-20 158.0 14.6 133 679-823 1-138 (199)
430 PF13426 PAS_9: PAS domain; PD 99.7 1.4E-15 3.1E-20 138.2 13.6 104 202-308 1-104 (104)
431 cd05144 RIO2_C RIO kinase fami 99.6 1.2E-15 2.6E-20 157.3 13.1 140 673-825 16-176 (198)
432 PF13426 PAS_9: PAS domain; PD 99.6 2E-15 4.2E-20 137.3 12.5 104 485-591 1-104 (104)
433 PRK09605 bifunctional UGMP fam 99.6 2.4E-15 5.3E-20 178.4 15.7 140 672-824 333-477 (535)
434 KOG0195 Integrin-linked kinase 99.6 1.5E-16 3.3E-21 160.7 3.1 198 668-902 186-393 (448)
435 KOG0606 Microtubule-associated 99.6 4.2E-16 9.1E-21 183.4 5.8 175 672-900 83-260 (1205)
436 cd05119 RIO RIO kinase family, 99.6 8.9E-15 1.9E-19 149.2 13.1 139 677-825 2-165 (187)
437 KOG1240 Protein kinase contain 99.6 8.9E-16 1.9E-20 180.6 4.5 203 673-901 24-242 (1431)
438 PRK01723 3-deoxy-D-manno-octul 99.6 3.7E-14 7.9E-19 150.2 15.3 137 679-824 38-192 (239)
439 PF08448 PAS_4: PAS fold; Int 99.5 8.7E-14 1.9E-18 127.9 12.3 110 198-311 1-110 (110)
440 PF08448 PAS_4: PAS fold; Int 99.5 5.6E-14 1.2E-18 129.2 10.4 110 481-594 1-110 (110)
441 cd05120 APH_ChoK_like Aminogly 99.5 1.3E-13 2.9E-18 134.1 12.0 132 676-823 2-138 (155)
442 PF00989 PAS: PAS fold; Inter 99.5 1.9E-13 4E-18 126.4 11.8 112 192-306 1-113 (113)
443 PF00989 PAS: PAS fold; Inter 99.5 1.5E-13 3.2E-18 127.0 10.4 111 476-589 2-113 (113)
444 PRK13557 histidine kinase; Pro 99.4 5.3E-13 1.1E-17 159.0 13.9 148 475-622 30-177 (540)
445 PRK13559 hypothetical protein; 99.4 2.2E-12 4.8E-17 145.8 17.0 120 477-596 45-164 (361)
446 KOG0590 Checkpoint kinase and 99.4 1.8E-14 3.8E-19 170.7 -1.9 208 671-903 19-235 (601)
447 PRK11091 aerobic respiration c 99.4 1.4E-12 2.9E-17 162.7 14.3 158 459-621 138-296 (779)
448 KOG1033 eIF-2alpha kinase PEK/ 99.4 6.2E-14 1.3E-18 155.6 2.0 125 745-893 329-457 (516)
449 PRK13557 histidine kinase; Pro 99.4 3.8E-12 8.2E-17 151.6 16.3 130 189-318 27-156 (540)
450 PRK13559 hypothetical protein; 99.4 4.8E-12 1E-16 143.1 15.7 127 190-316 41-167 (361)
451 PRK11091 aerobic respiration c 99.4 1.3E-12 2.9E-17 162.8 11.1 143 174-319 137-279 (779)
452 PRK09776 putative diguanylate 99.4 7.8E-12 1.7E-16 162.0 18.0 190 133-334 485-684 (1092)
453 KOG1023 Natriuretic peptide re 99.4 1.1E-12 2.4E-17 148.6 8.5 152 726-903 1-163 (484)
454 TIGR01982 UbiB 2-polyprenylphe 99.4 2.5E-12 5.4E-17 147.9 11.5 188 630-825 76-308 (437)
455 PRK04750 ubiB putative ubiquin 99.4 4E-13 8.6E-18 156.1 4.7 187 631-825 79-315 (537)
456 PRK10060 RNase II stability mo 99.3 2.3E-11 5.1E-16 148.1 16.4 154 178-335 97-257 (663)
457 PRK13558 bacterio-opsin activa 99.3 4.6E-11 1E-15 146.4 17.6 128 192-319 148-275 (665)
458 cd05146 RIO3_euk RIO kinase fa 99.2 9.5E-11 2.1E-15 119.0 14.5 139 677-823 2-173 (197)
459 PRK13558 bacterio-opsin activa 99.2 9.9E-11 2.1E-15 143.4 15.2 123 477-599 150-272 (665)
460 cd05151 ChoK Choline Kinase (C 99.2 7.2E-11 1.6E-15 118.2 10.8 128 677-823 3-136 (170)
461 TIGR02040 PpsR-CrtJ transcript 99.2 1.4E-10 3E-15 135.0 14.0 125 192-325 252-378 (442)
462 KOG1243 Protein kinase [Genera 99.2 1.6E-10 3.4E-15 132.1 13.9 168 690-894 30-199 (690)
463 KOG3087 Serine/threonine prote 99.2 2.3E-10 5E-15 111.3 12.9 147 676-824 11-166 (229)
464 PRK10060 RNase II stability mo 99.2 7.9E-11 1.7E-15 143.5 11.9 119 477-599 113-233 (663)
465 TIGR02938 nifL_nitrog nitrogen 99.2 8.7E-11 1.9E-15 138.0 10.2 118 477-597 6-123 (494)
466 TIGR00229 sensory_box PAS doma 99.1 5.4E-10 1.2E-14 100.0 12.8 120 192-315 3-123 (124)
467 COG3642 Mn2+-dependent serine/ 99.1 7.2E-10 1.6E-14 108.7 14.1 135 678-824 2-141 (204)
468 PRK11359 cyclic-di-GMP phospho 99.1 4.3E-10 9.2E-15 140.9 16.0 142 169-317 117-259 (799)
469 KOG0601 Cyclin-dependent kinas 99.1 6.3E-11 1.4E-15 134.5 4.9 204 670-898 112-327 (524)
470 KOG0606 Microtubule-associated 99.1 5.7E-11 1.2E-15 140.9 4.5 231 669-901 801-1038(1205)
471 PF08447 PAS_3: PAS fold; Int 99.1 5.4E-10 1.2E-14 99.4 9.2 86 500-586 1-91 (91)
472 TIGR00229 sensory_box PAS doma 99.1 1.2E-09 2.7E-14 97.7 11.3 116 477-596 5-121 (124)
473 PF08447 PAS_3: PAS fold; Int 99.0 1.3E-09 2.9E-14 96.8 9.9 86 217-303 1-91 (91)
474 cd05154 ACAD10_11_like Acyl-Co 98.9 5.1E-09 1.1E-13 109.4 11.2 140 678-823 4-206 (223)
475 PRK15123 lipopolysaccharide co 98.9 2.9E-08 6.3E-13 106.5 15.7 135 687-823 37-194 (268)
476 cd00130 PAS PAS domain; PAS mo 98.8 7.1E-08 1.5E-12 81.8 13.4 102 202-306 2-103 (103)
477 PRK11073 glnL nitrogen regulat 98.8 9.4E-09 2E-13 115.5 10.0 137 476-622 8-144 (348)
478 KOG0601 Cyclin-dependent kinas 98.8 2.1E-09 4.6E-14 122.2 4.5 196 668-896 261-464 (524)
479 cd00130 PAS PAS domain; PAS mo 98.8 9.3E-08 2E-12 81.1 13.5 103 484-589 1-103 (103)
480 PF01163 RIO1: RIO1 family; I 98.8 2.1E-08 4.6E-13 101.5 10.7 128 687-824 1-156 (188)
481 KOG1266 Protein kinase [Signal 98.8 6.3E-09 1.4E-13 109.2 6.8 149 724-895 119-279 (458)
482 COG3829 RocR Transcriptional r 98.8 4.1E-08 9E-13 110.6 13.4 221 196-595 5-225 (560)
483 PRK11360 sensory histidine kin 98.8 3.3E-08 7.1E-13 119.2 13.1 141 476-622 263-404 (607)
484 KOG3741 Poly(A) ribonuclease s 98.7 9.3E-08 2E-12 106.4 13.8 167 685-895 289-473 (655)
485 TIGR02966 phoR_proteo phosphat 98.7 5.3E-08 1.1E-12 108.0 11.1 113 189-317 3-115 (333)
486 KOG0501 K+-channel KCNQ [Inorg 98.7 3.9E-08 8.4E-13 108.8 8.9 120 477-596 16-140 (971)
487 PRK11073 glnL nitrogen regulat 98.7 7.5E-08 1.6E-12 108.2 11.3 117 191-317 6-122 (348)
488 TIGR02966 phoR_proteo phosphat 98.7 6.8E-08 1.5E-12 107.1 10.0 104 476-595 7-110 (333)
489 PRK11360 sensory histidine kin 98.7 1.5E-07 3.2E-12 113.5 13.7 127 186-318 256-383 (607)
490 PF13596 PAS_10: PAS domain; P 98.7 9.8E-08 2.1E-12 87.7 9.2 106 194-307 1-106 (106)
491 PRK09902 hypothetical protein; 98.6 8.5E-07 1.8E-11 90.5 15.4 141 681-823 27-179 (216)
492 PF13596 PAS_10: PAS domain; P 98.6 1.5E-07 3.2E-12 86.6 9.1 106 477-590 1-106 (106)
493 COG0478 RIO-like serine/threon 98.6 2.1E-07 4.5E-12 96.9 10.5 138 674-823 93-251 (304)
494 PF06293 Kdo: Lipopolysacchari 98.6 7.2E-07 1.6E-11 92.5 14.6 107 716-824 55-171 (206)
495 PF12860 PAS_7: PAS fold 98.6 2.1E-07 4.6E-12 86.8 8.7 105 198-314 1-115 (115)
496 COG4248 Uncharacterized protei 98.6 5.6E-07 1.2E-11 97.8 12.5 189 676-902 15-226 (637)
497 KOG0501 K+-channel KCNQ [Inorg 98.5 2.5E-07 5.3E-12 102.6 9.8 121 192-312 14-139 (971)
498 PF12860 PAS_7: PAS fold 98.5 2.2E-07 4.9E-12 86.7 8.2 104 481-596 1-114 (115)
499 PRK11388 DNA-binding transcrip 98.5 2.2E-06 4.8E-11 104.3 18.8 107 477-594 205-311 (638)
500 COG2202 AtoS FOG: PAS/PAC doma 98.5 1.2E-05 2.6E-10 79.2 18.8 114 477-594 114-230 (232)
No 1
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-42 Score=364.11 Aligned_cols=205 Identities=40% Similarity=0.636 Sum_probs=187.7
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
....++|++++.||+|+||+||.++.+.|++.||+|++++.......+......|..+|..++||+||+++..|++.+.+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL 100 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL 100 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence 35578999999999999999999999999999999999998888888889999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+|++|+.||.|+.+|.++ +.|++..++.++..|+.||.|||++|||||||||+||||+.+|+++|+|||+|+..-.
T Consensus 101 ylVld~~~GGeLf~hL~~e--g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~- 177 (357)
T KOG0598|consen 101 YLVLDYLNGGELFYHLQRE--GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK- 177 (357)
T ss_pred EEEEeccCCccHHHHHHhc--CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhccc-
Confidence 9999999999999999875 4599999999999999999999999999999999999999999999999999975221
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
....+.++|||+.|||||++.+ +..+|.||||+++|+|++|.+||...
T Consensus 178 --------------------------~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 178 --------------------------DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred --------------------------CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 1223456899999999999994 45899999999999999999999753
No 2
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1e-41 Score=361.63 Aligned_cols=199 Identities=25% Similarity=0.407 Sum_probs=180.5
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.+.+.||+|+|++||+|+++.++..||||.+.+..+ .....+.+..|+.+|+.++|||||.+++++.+++++|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 5789999999999999999999999999999999987644 666778889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC------CcEEEEeccCcccc
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN------GHVSLTDFDLSCLT 824 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~------~~vkL~DFG~s~~~ 824 (905)
||||.||+|.+|+++.+ .+++..++.++.||+.||++||+++||||||||+||||+.. -.+||+|||+|+.+
T Consensus 88 MEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 99999999999998864 59999999999999999999999999999999999999764 46899999999876
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. .....+.||+|.|||||++. ...|+|+||+|++||++++|+.||..
T Consensus 166 ~~----------------------------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 166 QP----------------------------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred Cc----------------------------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 51 22345789999999999996 34599999999999999999999973
No 3
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-41 Score=375.47 Aligned_cols=201 Identities=26% Similarity=0.414 Sum_probs=186.9
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
..|...+.||+|+|+.||.+++..+|..||+|++.+..+......+.+.+|+++.+.|+|||||++|++|++.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 57999999999999999999999999999999999988888889999999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|+|..++|..++++. +.+++.+++.+++||+.||.|||+++|+|||||..|+||+++.++||+|||+|+.+..+
T Consensus 98 ELC~~~sL~el~Krr--k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~---- 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR--KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD---- 171 (592)
T ss_pred EecCCccHHHHHHhc--CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc----
Confidence 999999999999864 56999999999999999999999999999999999999999999999999999876522
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.....+.||||.|+|||++.. ...+||||+|||||.|++|++||+..
T Consensus 172 -----------------------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk 221 (592)
T KOG0575|consen 172 -----------------------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK 221 (592)
T ss_pred -----------------------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc
Confidence 234567899999999999993 56999999999999999999999753
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.6e-42 Score=360.84 Aligned_cols=203 Identities=29% Similarity=0.426 Sum_probs=179.8
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN----RNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
..+.|.+.+.||+|+||.|-+|..+.||+.||||++++..... ......+.+|+++|++|+|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 3568999999999999999999999999999999999875433 223445679999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC---CcEEEEeccCcc
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSC 822 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~---~~vkL~DFG~s~ 822 (905)
+.||||||++||+|++.+-.+ +.+.+.....+++|++.||.|||++||+||||||+|||+..+ ..+||+|||+|+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK 327 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAK 327 (475)
T ss_pred ceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhh
Confidence 999999999999999999875 458888889999999999999999999999999999999766 689999999998
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CC-CchHHHHHHHHHHHHhCCC
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YT-RMTRYNYLILVSKKFMEFQ 896 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~-~sDiwSlGvil~elltg~~ 896 (905)
..+ ......++||||.|.|||++.. ++ +.|+|||||+||-+++|.+
T Consensus 328 ~~g----------------------------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~p 379 (475)
T KOG0615|consen 328 VSG----------------------------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYP 379 (475)
T ss_pred ccc----------------------------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCC
Confidence 754 2335678999999999999983 33 8899999999999999999
Q ss_pred Cchhhh
Q 002580 897 PFPILC 902 (905)
Q Consensus 897 PF~~~~ 902 (905)
||..-.
T Consensus 380 PFS~~~ 385 (475)
T KOG0615|consen 380 PFSEEY 385 (475)
T ss_pred Cccccc
Confidence 997643
No 5
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=338.25 Aligned_cols=201 Identities=39% Similarity=0.691 Sum_probs=186.2
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
...++|++++.||.|+||.|.+++.+.+|..||+|++++.........+...+|..+|+.+.||+++++++.|.+.+++|
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly 120 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY 120 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence 45789999999999999999999999999999999999987777778889999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
|||||++||.|+.++++. ++|++..++.++.||+.||+|||+++|++|||||+|||||.+|.+||+|||+|+...
T Consensus 121 mvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 121 MVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred EEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 999999999999999885 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
..+.+.||||.|+|||++.. ..++|-||||+++|||+.|.+||..-
T Consensus 196 ---------------------------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 196 ---------------------------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred ---------------------------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 12457899999999999983 45889999999999999999999753
No 6
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=359.41 Aligned_cols=217 Identities=34% Similarity=0.525 Sum_probs=191.6
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 746 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 746 (905)
.....+|.+++.||.|+|++|++|+++.+++.||||++.+..+.....+..+.+|..+|.+| .||.|++||..|++...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34577999999999999999999999999999999999998888888888999999999999 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
+|+|+||+++|+|.++|++. +.|++..++.++.+|+.||+|||++|||||||||+||||+.+|++||+|||.|+.+..
T Consensus 149 LYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred eEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 99999999999999999886 4599999999999999999999999999999999999999999999999999998775
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...... ++..-........+|+||..|.+||++.. ...+|+|+||||||.|+.|.+||..
T Consensus 227 ~~~~~~--------------~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra 289 (604)
T KOG0592|consen 227 SQKSQE--------------NPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRA 289 (604)
T ss_pred hhcccc--------------CccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcc
Confidence 433211 11111111122367999999999999994 5699999999999999999999964
No 7
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-39 Score=345.46 Aligned_cols=257 Identities=46% Similarity=0.768 Sum_probs=216.8
Q ss_pred CCCCCCCCCchhhHHhhc-CccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHH
Q 002580 646 PKPHRKDSPPWKAIQKIL-DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE 724 (905)
Q Consensus 646 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~ 724 (905)
..||......|..+.... ..+..+..++|++++.||+|.-|+||+|....++..+|+|++.+..+...+...+.+.|.+
T Consensus 50 ~kph~~~d~~w~a~~~~~~~~~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~e 129 (459)
T KOG0610|consen 50 NKPHKGNDVRWEAISSIRNSKDGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTERE 129 (459)
T ss_pred CCCCCCCchhhhhhccccccCCCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHH
Confidence 467777777888777655 4667788999999999999999999999999999999999999998888889999999999
Q ss_pred HHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCC
Q 002580 725 ILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (905)
Q Consensus 725 il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~N 804 (905)
||+.++||+++.||..|+.+.+.|++||||+||+|+.++++++.+.|++..++.++..++.||+|||-.|||+|||||+|
T Consensus 130 IL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN 209 (459)
T KOG0610|consen 130 ILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN 209 (459)
T ss_pred HHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCCCCcc----------------------hhhhcccc-C-----CCCcccccc-cc
Q 002580 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT----------------------NEKKRRHK-G-----QQNPVFMAE-PM 855 (905)
Q Consensus 805 ILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~----------------------~~~~~~~~-~-----~~~~~~~~~-~~ 855 (905)
|||.++|++.|+||.++..+...+....... .....+.+ . ...|-.+++ ..
T Consensus 210 ILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~ 289 (459)
T KOG0610|consen 210 ILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTG 289 (459)
T ss_pred eEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCC
Confidence 9999999999999999987754343332111 00000000 0 011112223 34
Q ss_pred cccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhhh
Q 002580 856 RASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPILC 902 (905)
Q Consensus 856 ~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~~ 902 (905)
....+++||.+|+|||++.| ..+.|.|+||++||||++|..||...-
T Consensus 290 ~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~ 339 (459)
T KOG0610|consen 290 ARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSN 339 (459)
T ss_pred ccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCC
Confidence 66778999999999999995 348999999999999999999997543
No 8
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.4e-40 Score=359.70 Aligned_cols=231 Identities=34% Similarity=0.552 Sum_probs=191.2
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.+..++|.+++.||+|+||.||+|+.+.||..||+|++++..+...+++..+..|..+|...++|+||++|..|++..++
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 56788999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
||||||++||++..+|.+. ..+++..++.++.+++.||..||+.|+|||||||+|+|||..|++||+|||+|.-+.+.
T Consensus 217 YLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~ 294 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKK 294 (550)
T ss_pred EEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhh
Confidence 9999999999999999875 45999999999999999999999999999999999999999999999999999655432
Q ss_pred CCCCC-----------Ccchhhhccc-----cC----CCCcccccccccccccccCCccccccccccC---CCCchHHHH
Q 002580 828 PQLLL-----------PTTNEKKRRH-----KG----QQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNY 884 (905)
Q Consensus 828 ~~~~~-----------~~~~~~~~~~-----~~----~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSl 884 (905)
..... .......... .. .....|....-....+.+|||.|||||++.+ ...+|.|||
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 295 HRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred hhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHH
Confidence 21110 0000000000 00 0000011111223446799999999999994 348999999
Q ss_pred HHHHHHHHhCCCCchh
Q 002580 885 LILVSKKFMEFQPFPI 900 (905)
Q Consensus 885 Gvil~elltg~~PF~~ 900 (905)
||||||||.|.+||..
T Consensus 375 G~ImyEmLvGyPPF~s 390 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCS 390 (550)
T ss_pred HHHHHHHHhCCCCCCC
Confidence 9999999999999963
No 9
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-39 Score=338.16 Aligned_cols=201 Identities=27% Similarity=0.439 Sum_probs=181.8
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
..+..++.+.++.||+|..|+||+|.++.|++.+|+|++.. ..+....+++.+|+++++.++|||||.+|+.|..++.
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~--~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~ 151 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL--NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE 151 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc--cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence 44566788999999999999999999999999999999953 3456677899999999999999999999999999984
Q ss_pred -EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 747 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 747 -~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
++|+||||.+|+|..++... +++++.....|+.+|++||.|||+ ++||||||||+|||++..|.+||||||.|..+
T Consensus 152 ~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~l 229 (364)
T KOG0581|consen 152 EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGIL 229 (364)
T ss_pred eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHh
Confidence 99999999999999999875 559999999999999999999996 89999999999999999999999999999765
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
..+ ...+++||..|||||-+.+ ..++||||||++|+|+.+|++||..
T Consensus 230 vnS-----------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~ 279 (364)
T KOG0581|consen 230 VNS-----------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPP 279 (364)
T ss_pred hhh-----------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCC
Confidence 321 2457899999999999996 3499999999999999999999975
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-40 Score=334.38 Aligned_cols=203 Identities=27% Similarity=0.438 Sum_probs=179.8
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEE-EEEeCCe-E
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA-SFQTKTH-V 747 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~-~~~~~~~-~ 747 (905)
...+|++++.||.|+||.||++.+..+|..+|.|.++-. ..+....+....|+.+|++|+|||||++|+ .|..++. +
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl 95 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVL 95 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhh
Confidence 456899999999999999999999999999999999844 556777888999999999999999999998 5555554 9
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 748 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHC--QG--IIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~gL~~LH~--~g--IvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
+||||||.+|+|..+++. ...+.+++..+++++.|++.||.+||+ .. |+||||||.||+|+.+|.+||+|||++
T Consensus 96 nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~ 175 (375)
T KOG0591|consen 96 NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG 175 (375)
T ss_pred HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence 999999999999999874 345679999999999999999999999 44 999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
+.+..... ...+++|||.||+||.+.. +.+|||||+||++|||+.-++||
T Consensus 176 r~l~s~~t---------------------------fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF 228 (375)
T KOG0591|consen 176 RFLSSKTT---------------------------FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF 228 (375)
T ss_pred hHhcchhH---------------------------HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence 88653322 3457899999999999984 45999999999999999999999
Q ss_pred hh
Q 002580 899 PI 900 (905)
Q Consensus 899 ~~ 900 (905)
..
T Consensus 229 ~g 230 (375)
T KOG0591|consen 229 YG 230 (375)
T ss_pred cc
Confidence 64
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.7e-38 Score=321.14 Aligned_cols=200 Identities=24% Similarity=0.341 Sum_probs=175.4
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
+.|+.+.++|+|+||.||+|+++.||+.||||.+... ..++...+-.++|+++|++++|+|+|.++.+|.....+++|+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es-edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES-EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC-CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 5789999999999999999999999999999998754 334555667789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||+. ++.+-+.+.+. .++...+..++.|++.|+.|||+++++||||||+||||+.+|.+||||||+|+.+..
T Consensus 81 E~~dh-TvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~----- 153 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA----- 153 (396)
T ss_pred eecch-HHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-----
Confidence 99954 55555665543 489999999999999999999999999999999999999999999999999987652
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHHHhCCCCchhh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
+...-+.++.|.+|.|||.+.|. ...||||+||++.||++|.+.|+.-
T Consensus 154 ----------------------pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~ 205 (396)
T KOG0593|consen 154 ----------------------PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR 205 (396)
T ss_pred ----------------------CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc
Confidence 22234568999999999999973 4889999999999999999999854
No 12
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-37 Score=346.19 Aligned_cols=203 Identities=37% Similarity=0.680 Sum_probs=184.6
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 745 (905)
..+..++|.++++||+|.||+|+++..+.+++.||||++++..+...++++..+.|..|+... +||++++++.+|++.+
T Consensus 363 ~~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~ 442 (694)
T KOG0694|consen 363 GPLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE 442 (694)
T ss_pred CcccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence 367889999999999999999999999999999999999999998999999999999999887 5999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
++|+||||+.||++..+.+ ...|++..++.|+..|+.||.|||++||||||||.+|||+|.+|.+||+|||+|+..-
T Consensus 443 ~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 443 HLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred eEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999999543332 3569999999999999999999999999999999999999999999999999996521
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
..+..+.++||||.|||||++.+ +.+.|-|||||+||+|+.|..||+
T Consensus 520 ---------------------------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~ 569 (694)
T KOG0694|consen 520 ---------------------------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFP 569 (694)
T ss_pred ---------------------------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCC
Confidence 12346778999999999999994 348899999999999999999997
No 13
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-37 Score=325.70 Aligned_cols=200 Identities=27% Similarity=0.461 Sum_probs=185.7
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
..+|++.+.||+|+||.|-++.....|+.||||.+.+..+.+..+.-.+.+|++||..|+||||+.+|.+|+..+.+.||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35799999999999999999999999999999999999888889999999999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||..+|.|++|+...+ .+++.+++.+++||+.|+.|||.++++|||||.+|||+|.++++||+|||++-...
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~----- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA----- 204 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc-----
Confidence 99999999999998864 49999999999999999999999999999999999999999999999999985432
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....++|||+|-|.+||++.|. +..|.||||++||.|++|..||..
T Consensus 205 -----------------------~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG 255 (668)
T KOG0611|consen 205 -----------------------DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDG 255 (668)
T ss_pred -----------------------cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCC
Confidence 22345789999999999999963 489999999999999999999964
No 14
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=336.32 Aligned_cols=203 Identities=31% Similarity=0.515 Sum_probs=179.1
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCH--HHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR--NKVHRACAEREILDMLD-HPFVPALYASFQTKT 745 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~--~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~ 745 (905)
...+.|.+.+.||+|+||+|+.|.+..++..||+|++.+...... .....+.+|+.+++.+. ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 446799999999999999999999999999999998876522211 33456678999999998 999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-CcEEEEeccCcccc
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 824 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-~~vkL~DFG~s~~~ 824 (905)
.+|+|||||.||+|++++.. .+++.+..+..++.||+.|++|||++||+||||||+|||++.+ +++||+|||++...
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~ 171 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS 171 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence 99999999999999999988 3569999999999999999999999999999999999999999 99999999999764
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---C--CCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---Y--TRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~--~~sDiwSlGvil~elltg~~PF~ 899 (905)
. .......++|||+.|+|||++.+ | .++|+||||++||.|++|+.||.
T Consensus 172 ~---------------------------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~ 224 (370)
T KOG0583|consen 172 P---------------------------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFD 224 (370)
T ss_pred C---------------------------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCC
Confidence 2 01223457899999999999994 3 48999999999999999999997
Q ss_pred h
Q 002580 900 I 900 (905)
Q Consensus 900 ~ 900 (905)
.
T Consensus 225 d 225 (370)
T KOG0583|consen 225 D 225 (370)
T ss_pred C
Confidence 5
No 15
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-37 Score=339.35 Aligned_cols=200 Identities=29% Similarity=0.451 Sum_probs=183.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.+-|++++.||.|+.|.|-+|++..||+..|||++.+...........+.+|+-+|+.+.||||+.+|++|.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 56799999999999999999999999999999999987555666677889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
+||++||.|++++-+. +++++.++.+++.||+.|+.|||..+||||||||+|+||+..+++||+|||+|..-.
T Consensus 91 lEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~----- 163 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEV----- 163 (786)
T ss_pred EEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeeccc-----
Confidence 9999999999999875 559999999999999999999999999999999999999999999999999996532
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
+.....+.||+|.|.|||++.| ..++||||+|||||-|++|++||..
T Consensus 164 -----------------------~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD 214 (786)
T KOG0588|consen 164 -----------------------PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD 214 (786)
T ss_pred -----------------------CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC
Confidence 3344567899999999999996 3599999999999999999999963
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.2e-37 Score=330.62 Aligned_cols=204 Identities=24% Similarity=0.303 Sum_probs=177.4
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--C
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 745 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~ 745 (905)
+...+.|+.+++||+|+||.||+|++..||+.||+|.+.... ..........+||.||++|+||||+++.+..... +
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~-~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~ 191 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDN-EKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSG 191 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeeccc-CCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCc
Confidence 445678999999999999999999999999999999998653 2345566778999999999999999999988876 7
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
.+|||+|||+ .+|.-++... .-.|++.++..|++||+.||.|||++||+|||||.+|||||.+|.+||+|||+|++..
T Consensus 192 siYlVFeYMd-hDL~GLl~~p-~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 192 SIYLVFEYMD-HDLSGLLSSP-GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred eEEEEEeccc-chhhhhhcCC-CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeecc
Confidence 8999999994 5888887653 3459999999999999999999999999999999999999999999999999998755
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.... ...+..+-|.+|.|||.+.| ....|+||+||||.||++|++.|+.
T Consensus 270 ~~~~--------------------------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G 322 (560)
T KOG0600|consen 270 PSGS--------------------------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG 322 (560)
T ss_pred CCCC--------------------------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC
Confidence 3221 12345688999999999996 3489999999999999999999864
No 17
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.9e-37 Score=332.75 Aligned_cols=198 Identities=30% Similarity=0.436 Sum_probs=178.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+.. ....+.+.+.+|++|++.++||||+.++++|+...++|+|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g-r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG-RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC-CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 57999999999999999999999999999999998763 35567788999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||.| +|+.++.... .++++.+..|+.+++.||.|||+++|+|||+||.|||+...|.+|+||||+++..+..
T Consensus 81 e~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---- 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---- 153 (808)
T ss_pred hhhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC----
Confidence 99976 9999998864 4999999999999999999999999999999999999999999999999999765421
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
....+..-|||.|||||.+.+ ...+|.||+||++||++.|++||..
T Consensus 154 -----------------------t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a 202 (808)
T KOG0597|consen 154 -----------------------TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA 202 (808)
T ss_pred -----------------------ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH
Confidence 122345679999999999995 4489999999999999999999964
No 18
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=327.86 Aligned_cols=206 Identities=27% Similarity=0.417 Sum_probs=177.7
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeE-EEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~-vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
..++.....+.+.||.|+||+||++.+. |.. +|+|++......... ...|.+|+.+|.+++|||||++++++....
T Consensus 36 ~~i~~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~ 112 (362)
T KOG0192|consen 36 EEIDPDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPP 112 (362)
T ss_pred eecChHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4456667777888999999999999994 445 999999876444333 778999999999999999999999999887
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeCCCCCCCEEEcCCC-cEEEEeccCcc
Q 002580 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLLQGNG-HVSLTDFDLSC 822 (905)
Q Consensus 746 -~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~g-IvHrDLKp~NILl~~~~-~vkL~DFG~s~ 822 (905)
..+|||||+++|+|.+++.......++...+..|+.||+.||.|||+++ ||||||||+|||++.++ ++||+|||+++
T Consensus 113 ~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr 192 (362)
T KOG0192|consen 113 GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSR 192 (362)
T ss_pred CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccce
Confidence 7999999999999999998754567999999999999999999999999 99999999999999998 99999999997
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCC
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~P 897 (905)
...... .......||+.|||||++.+ +.++|+||||++||||+||..|
T Consensus 193 ~~~~~~---------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~P 245 (362)
T KOG0192|consen 193 EKVISK---------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIP 245 (362)
T ss_pred eecccc---------------------------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCC
Confidence 643211 11233689999999999992 4599999999999999999999
Q ss_pred chhhh
Q 002580 898 FPILC 902 (905)
Q Consensus 898 F~~~~ 902 (905)
|+...
T Consensus 246 f~~~~ 250 (362)
T KOG0192|consen 246 FEDLA 250 (362)
T ss_pred CCCCC
Confidence 98653
No 19
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=321.09 Aligned_cols=209 Identities=30% Similarity=0.431 Sum_probs=173.9
Q ss_pred cccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccC-----------HHHHHHHHHHHHHHHhCCCCCc
Q 002580 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------RNKVHRACAEREILDMLDHPFV 734 (905)
Q Consensus 666 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~-----------~~~~~~~~~E~~il~~l~h~nI 734 (905)
.....+++|++++.||+|.||.|-+|++..+++.||||++.+..... ....+...+|+.+|++|.||||
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nV 170 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNV 170 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCe
Confidence 34456789999999999999999999999999999999998753221 1224678999999999999999
Q ss_pred ceEEEEEEeC--CeEEEEEeccCCCCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC
Q 002580 735 PALYASFQTK--THVCLITDYCPGGELFLLLDRQPTKV-LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (905)
Q Consensus 735 v~l~~~~~~~--~~~~lV~E~~~gg~L~~~l~~~~~~~-l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~ 811 (905)
|+|+.+..+. +.+|||+|||..|.+...- ..+. +++.++++|+++++.||.|||.+|||||||||+|+||+++|
T Consensus 171 V~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 171 VKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred eEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCC
Confidence 9999998764 6899999999988775332 2344 89999999999999999999999999999999999999999
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-------CCCchHHHH
Q 002580 812 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-------YTRMTRYNY 884 (905)
Q Consensus 812 ~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-------~~~sDiwSl 884 (905)
++||+|||.+......... .........+|||.|+|||.+.+ ..+.||||+
T Consensus 248 ~VKIsDFGVs~~~~~~~~~----------------------~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWal 305 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDE----------------------GSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWAL 305 (576)
T ss_pred cEEeeccceeeecccCCcc----------------------ccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhh
Confidence 9999999999765422110 01112233689999999999985 238899999
Q ss_pred HHHHHHHHhCCCCch
Q 002580 885 LILVSKKFMEFQPFP 899 (905)
Q Consensus 885 Gvil~elltg~~PF~ 899 (905)
||+||.|++|+.||-
T Consensus 306 GVTLYCllfG~~PF~ 320 (576)
T KOG0585|consen 306 GVTLYCLLFGQLPFF 320 (576)
T ss_pred hhhHHHhhhccCCcc
Confidence 999999999999994
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=327.54 Aligned_cols=202 Identities=24% Similarity=0.399 Sum_probs=178.7
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC-
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT- 745 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~- 745 (905)
.+..++|.++++||.|+||.||+|+...++..||||.+++... ..++. .-++|+..|++|+ ||||+++.+++.+.+
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~-s~ee~-~nLREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFY-SWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhc-cHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 3457899999999999999999999999999999999988744 33332 2358999999998 999999999999887
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
.+|+||||| ..+|+++++.+ ...|++..++.|+.||++||+|+|.+|+.||||||+|||+.....+||+|||+|+.+.
T Consensus 84 ~L~fVfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 84 ILYFVFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eEeeeHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc
Confidence 999999999 68999999877 6789999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
+.+- -+.++.|.+|.|||++.. +.+.|+||+|||++|+++-++.|+..
T Consensus 162 SkpP----------------------------YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~ 213 (538)
T KOG0661|consen 162 SKPP----------------------------YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA 213 (538)
T ss_pred cCCC----------------------------cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC
Confidence 3321 246789999999999983 34999999999999999999999754
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-35 Score=313.39 Aligned_cols=211 Identities=24% Similarity=0.387 Sum_probs=185.0
Q ss_pred ccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 665 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
.....+.+.|++...||.|..++||+|++..++..||||++..... ......+.+|+..++.++||||++++.+|..+
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc--~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~ 96 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKC--NNDLDALRKEVQTMSLIDHPNIVTYHCSFVVD 96 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhh--hhhHHHHHHHHHHhhhcCCCCcceEEEEEEec
Confidence 4456778899999999999999999999999999999999986533 23478899999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+|+||.||.+|++.++++......+++..+..|+++++.||.|||.+|.||||||+.||||+.+|.|||+|||.+..+
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l 176 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL 176 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee
Confidence 99999999999999999999876667999999999999999999999999999999999999999999999999988654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc----CC-CCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF----AY-TRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~----~~-~~sDiwSlGvil~elltg~~PF~ 899 (905)
..... + .......++||+.|||||++. || .|+||||||++.+||.+|..||.
T Consensus 177 ~~~G~--------R---------------~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~ 233 (516)
T KOG0582|consen 177 FDSGD--------R---------------QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFS 233 (516)
T ss_pred cccCc--------e---------------eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcc
Confidence 32110 0 001126789999999999965 44 49999999999999999999996
Q ss_pred h
Q 002580 900 I 900 (905)
Q Consensus 900 ~ 900 (905)
.
T Consensus 234 k 234 (516)
T KOG0582|consen 234 K 234 (516)
T ss_pred c
Confidence 4
No 22
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-36 Score=299.15 Aligned_cols=205 Identities=29% Similarity=0.425 Sum_probs=188.0
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.+..++|.+.+.||.|-||.||+++...++-.+|+|++.+..+......+++.+|++|-..|+||||+++|++|.+...+
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri 97 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI 97 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence 45678999999999999999999999999999999999988766666678899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+++||..+|+|+..|...+.+.+++..+..++.|++.||.|||.++++||||||+|+|++..|.+||+|||++...+
T Consensus 98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 999999999999999997777889999999999999999999999999999999999999999999999999985432
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.....+.|||..|.+||+..+ ....|+|++|++.||++.|.+||+..
T Consensus 176 ---------------------------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~ 225 (281)
T KOG0580|consen 176 ---------------------------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ 225 (281)
T ss_pred ---------------------------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhh
Confidence 223457899999999999995 55899999999999999999999854
No 23
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-36 Score=305.32 Aligned_cols=207 Identities=35% Similarity=0.611 Sum_probs=188.6
Q ss_pred ccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 665 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
....+.+++|..+++||+|.||+|-+|+.+.+++.||+|++++..+...+.+.....|-.+|+.++||++..+-..|+..
T Consensus 161 ~~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~ 240 (516)
T KOG0690|consen 161 RKNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQ 240 (516)
T ss_pred ccceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccC
Confidence 34467789999999999999999999999999999999999999888888999999999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
+.+|+||||..||.|+-++.+. ..|++..++.+...|+.||.|||+++||+||||.+|+|+|.+|++||+|||+|+--
T Consensus 241 drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 241 DRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred ceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc
Confidence 9999999999999999998774 55999999999999999999999999999999999999999999999999999642
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
. .......++||||.|+|||++.. ..+.|-|.+||+||||++|+.||..
T Consensus 319 I---------------------------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn 370 (516)
T KOG0690|consen 319 I---------------------------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN 370 (516)
T ss_pred c---------------------------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc
Confidence 1 12334678999999999999983 3488999999999999999999964
No 24
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.7e-35 Score=293.65 Aligned_cols=200 Identities=23% Similarity=0.363 Sum_probs=174.7
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
.+|...+.||+|.||.||+|++..||+.||||.++.....+ .......+|++.|+.++|+||+.++++|...+.+.||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 47888999999999999999999999999999998764322 22345789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+ ..+|...++.. ...++...+..++.++++||+|||++.|+||||||.|+||+++|.+||+|||+++.......
T Consensus 81 Efm-~tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-- 156 (318)
T KOG0659|consen 81 EFM-PTDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-- 156 (318)
T ss_pred Eec-cccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc--
Confidence 999 56999998764 45699999999999999999999999999999999999999999999999999988653322
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.....+-|.+|.|||.+.| .+..|+||.||++.||+.|.+-|+..
T Consensus 157 -------------------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~ 205 (318)
T KOG0659|consen 157 -------------------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD 205 (318)
T ss_pred -------------------------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC
Confidence 1122378999999999996 34889999999999999999888753
No 25
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.6e-34 Score=323.79 Aligned_cols=227 Identities=31% Similarity=0.513 Sum_probs=178.4
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++|+||+++++++.+...+|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998654444445567888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||+|++|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999999764 459999999999999999999999999999999999999999999999999987643211100
Q ss_pred CCcc-hh---hhccccCC----CCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTT-NE---KKRRHKGQ----QNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~-~~---~~~~~~~~----~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.... .. ........ ....+...........+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 0000 00 00000000 000000001111235689999999999874 4589999999999999999999953
No 26
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-35 Score=313.15 Aligned_cols=202 Identities=29% Similarity=0.423 Sum_probs=174.8
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVC 748 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~ 748 (905)
..+|...+.||+|+||.||++.+..+|..+|+|.+... +....+.+.+|+.+|.+++|||||++++...... .++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~---~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~ 92 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE---DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYN 92 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecc---cchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeE
Confidence 34688899999999999999999999999999998754 2222677899999999999999999999755444 699
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-CCcEEEEeccCccccCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-~~~vkL~DFG~s~~~~~~ 827 (905)
++|||+++|+|.+++.+.+. .+++..++.+.+||+.||.|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 93 i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 93 IFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred eeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 99999999999999998765 6999999999999999999999999999999999999999 799999999999765420
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc-C-CC--CchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF-A-YT--RMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~-~-~~--~sDiwSlGvil~elltg~~PF~~ 900 (905)
. ........+.||+.|||||++. + .. ++|||||||++.||+||..||..
T Consensus 172 ~------------------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 172 G------------------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred c------------------------ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 0 0112334678999999999999 4 23 89999999999999999999976
No 27
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=319.09 Aligned_cols=200 Identities=35% Similarity=0.616 Sum_probs=177.1
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
...++|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+|
T Consensus 15 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 94 (329)
T PTZ00263 15 WKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVY 94 (329)
T ss_pred CCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEE
Confidence 44679999999999999999999999999999999998654434445677889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
+||||+.+++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 95 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~-- 170 (329)
T PTZ00263 95 FLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD-- 170 (329)
T ss_pred EEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC--
Confidence 999999999999999765 3589999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 171 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 217 (329)
T PTZ00263 171 ----------------------------RTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFD 217 (329)
T ss_pred ----------------------------CcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCC
Confidence 1123579999999999984 4589999999999999999999953
No 28
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-34 Score=298.99 Aligned_cols=201 Identities=19% Similarity=0.239 Sum_probs=174.6
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 747 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~ 747 (905)
..+.|+.+..|++|+||.||+|+++.|++.||+|.++... ......-...+|+.+|.+++|||||.+-.+.... +.+
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek-ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~i 152 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK-EKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKI 152 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc-ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccccee
Confidence 4568999999999999999999999999999999997653 1222334567899999999999999999887743 579
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
||||||| ..+|..++...+ .+|...++..++.|++.||+|||.+.|+||||||+|+|++..|.+||+|||+|+.++..
T Consensus 153 y~VMe~~-EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 153 YIVMEYV-EHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred eeeHHHH-HhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 9999999 469999998764 56999999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
....+..+-|.+|.|||.+.| ++..|+||+|||+.||+++++.|+.
T Consensus 231 ---------------------------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G 280 (419)
T KOG0663|consen 231 ---------------------------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG 280 (419)
T ss_pred ---------------------------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC
Confidence 223345678999999999995 5699999999999999999999964
No 29
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.8e-34 Score=322.89 Aligned_cols=193 Identities=26% Similarity=0.427 Sum_probs=173.6
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-C-----CCcceEEEEEEeCCe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-H-----PFVPALYASFQTKTH 746 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h-----~nIv~l~~~~~~~~~ 746 (905)
+|.+++.||+|+||.|.+|.+..|++.||||++++. .....+...|+.+|..|+ | -|||+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 899999999999999999999999999999999864 445667788999999996 4 389999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC--CcEEEEeccCcccc
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLT 824 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~--~~vkL~DFG~s~~~ 824 (905)
+|||+|++ +.+|+++++.+....++...++.|+.||+.||.+||..||||+||||+||||..- ..+||+|||.|+..
T Consensus 263 lciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 263 LCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999999 7899999999888889999999999999999999999999999999999999653 47999999999874
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. ....++.+..|.|||++.| .++.||||||||+.||++|.+.|+.
T Consensus 342 ~q------------------------------~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 342 SQ------------------------------RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred CC------------------------------cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 31 1226788999999999996 4599999999999999999888864
No 30
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=6.4e-34 Score=321.91 Aligned_cols=227 Identities=32% Similarity=0.537 Sum_probs=177.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++++.||+|+||.||+|.+..+++.||||++.+...........+.+|+.++..++||||++++++|.+++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999999999999999998654334455567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++..........
T Consensus 81 E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 81 EYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999999764 359999999999999999999999999999999999999999999999999987543211100
Q ss_pred CCcchhh-----------hccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCC
Q 002580 832 LPTTNEK-----------KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 832 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~P 897 (905)
....... ...........+...........+||+.|+|||++.. +.++|+|||||++|+|++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 0000000 0000000000000000011224579999999999874 4589999999999999999999
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 239 f~~ 241 (364)
T cd05599 239 FCS 241 (364)
T ss_pred CCC
Confidence 953
No 31
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=6.1e-34 Score=311.88 Aligned_cols=197 Identities=34% Similarity=0.581 Sum_probs=173.7
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47999999999999999999999999999999997653333345567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----- 153 (291)
T cd05612 81 EYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----- 153 (291)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC-----
Confidence 999999999999764 3589999999999999999999999999999999999999999999999999864321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~ 200 (291)
T cd05612 154 -------------------------RTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFD 200 (291)
T ss_pred -------------------------CcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 1123478999999999874 4589999999999999999999953
No 32
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.3e-33 Score=321.35 Aligned_cols=226 Identities=34% Similarity=0.491 Sum_probs=177.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|.+++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||+++++++.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 68999999999999999999999999999999987655455566788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
||+|++|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 82 YIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred cCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99999999999764 3589999999999999999999999999999999999999999999999999864321110000
Q ss_pred Ccch--------hhhc------------cccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHH
Q 002580 833 PTTN--------EKKR------------RHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVS 889 (905)
Q Consensus 833 ~~~~--------~~~~------------~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ 889 (905)
.... .... .....................+||+.|+|||++.+ ..++|+|||||++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~ 239 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILF 239 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHH
Confidence 0000 0000 00000000000000111235689999999999873 45899999999999
Q ss_pred HHHhCCCCchh
Q 002580 890 KKFMEFQPFPI 900 (905)
Q Consensus 890 elltg~~PF~~ 900 (905)
+|++|..||..
T Consensus 240 elltG~~Pf~~ 250 (381)
T cd05626 240 EMLVGQPPFLA 250 (381)
T ss_pred HHHhCCCCCcC
Confidence 99999999953
No 33
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.5e-34 Score=322.82 Aligned_cols=227 Identities=33% Similarity=0.499 Sum_probs=176.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||+++++.|.+++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 37999999999999999999999999999999987653333445567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+|..........
T Consensus 81 E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 81 DYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999985432110000
Q ss_pred CCcchhhhc--------cc--------cCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH
Q 002580 832 LPTTNEKKR--------RH--------KGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF 892 (905)
Q Consensus 832 ~~~~~~~~~--------~~--------~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell 892 (905)
......... .. ...................+||+.|+|||++.+ ..++|+|||||++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 000000000 00 000000000001112235689999999999974 45899999999999999
Q ss_pred hCCCCchh
Q 002580 893 MEFQPFPI 900 (905)
Q Consensus 893 tg~~PF~~ 900 (905)
+|+.||..
T Consensus 239 ~G~~Pf~~ 246 (376)
T cd05598 239 VGQPPFLA 246 (376)
T ss_pred hCCCCCCC
Confidence 99999964
No 34
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-34 Score=290.84 Aligned_cols=200 Identities=27% Similarity=0.442 Sum_probs=176.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccc-----cCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----LNRNKVHRACAEREILDML-DHPFVPALYASFQTK 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~-----~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 744 (905)
...|...+.||.|..+.|..|.++.+|..+|+|++..... ....-.+...+|+.||+++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 4578889999999999999999999999999999875321 1123345667899999998 799999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+++|+|+|+.|.|++++... -.++++..+.|++|++.|+.|||.++||||||||+|||++++.++||+|||+++.+
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l 173 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL 173 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence 9999999999999999999874 45999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---------CCCchHHHHHHHHHHHHhCC
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---------YTRMTRYNYLILVSKKFMEF 895 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---------~~~sDiwSlGvil~elltg~ 895 (905)
. ++......||||+|+|||.+.+ +...|+|++|++||.|+.|.
T Consensus 174 ~----------------------------~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGc 225 (411)
T KOG0599|consen 174 E----------------------------PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGC 225 (411)
T ss_pred C----------------------------CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCC
Confidence 4 2233457899999999999982 23789999999999999999
Q ss_pred CCchh
Q 002580 896 QPFPI 900 (905)
Q Consensus 896 ~PF~~ 900 (905)
+||-.
T Consensus 226 pPFwH 230 (411)
T KOG0599|consen 226 PPFWH 230 (411)
T ss_pred CchhH
Confidence 99964
No 35
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.5e-33 Score=321.05 Aligned_cols=226 Identities=33% Similarity=0.502 Sum_probs=176.8
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|.+++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++|+||++++++|.+.+.+|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 68999999999999999999999999999999986544444556778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
||++|+|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||++...........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99999999999764 3589999999999999999999999999999999999999999999999999854321110000
Q ss_pred Ccchhhhc-cccC----CCCc---------------ccccccccccccccCCccccccccccC---CCCchHHHHHHHHH
Q 002580 833 PTTNEKKR-RHKG----QQNP---------------VFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVS 889 (905)
Q Consensus 833 ~~~~~~~~-~~~~----~~~~---------------~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ 889 (905)
.......+ .... ...+ .............+||+.|+|||++.+ ..++|+|||||+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 00000000 0000 0000 000000111234689999999999874 45999999999999
Q ss_pred HHHhCCCCchh
Q 002580 890 KKFMEFQPFPI 900 (905)
Q Consensus 890 elltg~~PF~~ 900 (905)
+|++|+.||..
T Consensus 240 elltG~~Pf~~ 250 (382)
T cd05625 240 EMLVGQPPFLA 250 (382)
T ss_pred HHHhCCCCCCC
Confidence 99999999963
No 36
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.1e-33 Score=321.70 Aligned_cols=226 Identities=32% Similarity=0.526 Sum_probs=175.7
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+++.||.|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47999999999999999999999999999999987654334455677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||+|++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999999764 458999999999999999999999999999999999999999999999999986432110000
Q ss_pred -----CCcchhhhc----cccCCC-----------CcccccccccccccccCCccccccccccC---CCCchHHHHHHHH
Q 002580 832 -----LPTTNEKKR----RHKGQQ-----------NPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILV 888 (905)
Q Consensus 832 -----~~~~~~~~~----~~~~~~-----------~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil 888 (905)
......... ...... ...+...........+||+.|+|||++.+ ..++|+|||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 000000000 000000 00000000001123679999999999874 4589999999999
Q ss_pred HHHHhCCCCch
Q 002580 889 SKKFMEFQPFP 899 (905)
Q Consensus 889 ~elltg~~PF~ 899 (905)
|+|++|..||.
T Consensus 239 ~elltG~~Pf~ 249 (377)
T cd05629 239 FECLIGWPPFC 249 (377)
T ss_pred hhhhcCCCCCC
Confidence 99999999995
No 37
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=316.54 Aligned_cols=201 Identities=32% Similarity=0.602 Sum_probs=176.1
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCC-eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~-~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
.+..++|.+.+.||+|+||.||+|.+..++ ..||+|.+.+...........+.+|+.+++.++||||+++++++.+.+.
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~ 105 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY 105 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence 356779999999999999999999976654 6899999876544444556678899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
+|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 106 ~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 106 LYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999999999775 4589999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 184 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 230 (340)
T PTZ00426 184 ------------------------------RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYA 230 (340)
T ss_pred ------------------------------CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCC
Confidence 1124579999999999874 4589999999999999999999964
No 38
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=316.54 Aligned_cols=206 Identities=24% Similarity=0.415 Sum_probs=181.2
Q ss_pred HHhhcCccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEE
Q 002580 659 IQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALY 738 (905)
Q Consensus 659 ~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~ 738 (905)
++.+...+++ ...|.....||+|+.|.||.+....+++.||+|.+... .....+.+.+|+.+|+..+|+|||.++
T Consensus 262 l~~v~~~~dP--~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~---~Q~~keLilnEi~Vm~~~~H~NiVnfl 336 (550)
T KOG0578|consen 262 LKRVVSQGDP--RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLR---KQPKKELLLNEILVMRDLHHPNIVNFL 336 (550)
T ss_pred hheeccCCCh--hhhhcchhhhccccccceeeeeeccCCceEEEEEEEec---cCCchhhhHHHHHHHHhccchHHHHHH
Confidence 3344445554 34788999999999999999999999999999999865 334456788999999999999999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEec
Q 002580 739 ASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 739 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DF 818 (905)
+.|...+.+|+||||++||+|.+.+... .+++.++..|++.++.||+|||.+||+|||||.+|||++.+|.+||+||
T Consensus 337 ~Sylv~deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDF 413 (550)
T KOG0578|consen 337 DSYLVGDELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDF 413 (550)
T ss_pred HHhcccceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeee
Confidence 9999999999999999999999998763 4999999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCC
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEF 895 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~ 895 (905)
|+|..+.... ....+.+|||.|||||+... .++.||||||+|++||+-|.
T Consensus 414 GFcaqi~~~~---------------------------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGE 466 (550)
T KOG0578|consen 414 GFCAQISEEQ---------------------------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGE 466 (550)
T ss_pred eeeecccccc---------------------------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCC
Confidence 9997754221 13357799999999999985 67999999999999999999
Q ss_pred CCch
Q 002580 896 QPFP 899 (905)
Q Consensus 896 ~PF~ 899 (905)
+||-
T Consensus 467 PPYl 470 (550)
T KOG0578|consen 467 PPYL 470 (550)
T ss_pred CCcc
Confidence 9984
No 39
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=8.2e-34 Score=321.32 Aligned_cols=203 Identities=30% Similarity=0.514 Sum_probs=176.3
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+|
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~ 119 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLY 119 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEE
Confidence 44678999999999999999999999999999999997644334444566788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
+|||||+|++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999999653 48899999999999999999999999999999999999999999999999986542110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||+||+|++|..||..
T Consensus 197 --------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~ 249 (370)
T cd05621 197 --------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 249 (370)
T ss_pred --------------------------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence 011235679999999999863 3589999999999999999999953
No 40
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.5e-33 Score=306.03 Aligned_cols=200 Identities=30% Similarity=0.458 Sum_probs=173.3
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|++.+.||+|+||.||+|.+..+++.||+|.+.+...........+.+|+.+++.++|+||+++++++.+++..|+|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 37888999999999999999999999999999876544333444567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|..++.......+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~----- 155 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG----- 155 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-----
Confidence 999999998886554456899999999999999999999999999999999999999999999999998653211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......||+.|+|||++.+ +.++|+|||||++|+|++|+.||..
T Consensus 156 -----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 203 (285)
T cd05631 156 -----------------------ETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRK 203 (285)
T ss_pred -----------------------CeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCC
Confidence 01123468999999999974 4589999999999999999999963
No 41
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.6e-33 Score=314.74 Aligned_cols=197 Identities=34% Similarity=0.540 Sum_probs=175.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++..++||||+++++++...+..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998764444445667889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----
Confidence 999999999999764 3589999999999999999999999999999999999999999999999999864321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 154 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 200 (333)
T cd05600 154 -------------------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSG 200 (333)
T ss_pred -------------------------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCC
Confidence 1234579999999999874 4589999999999999999999953
No 42
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.3e-33 Score=298.17 Aligned_cols=202 Identities=25% Similarity=0.372 Sum_probs=174.7
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCC----
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKT---- 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~---- 745 (905)
...|..++.||+|+||+||+|+...+|+.||+|.+..... .........+|+.+|+.++|+| |+.+++++...+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~-~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFE-EEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEecccc-ccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 4568888999999999999999999999999999986532 1223456789999999999999 999999998877
Q ss_pred --eEEEEEeccCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 746 --HVCLITDYCPGGELFLLLDRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 746 --~~~lV~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
.+++|+||+ ..+|..++..... ..++...++.++.||+.||+|||+++|+||||||.||||+++|.+||+|||+|
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence 899999999 6899999987653 35788899999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHHHhCCCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~elltg~~P 897 (905)
+.... +.......++|..|.|||++.|. +..|+||+||+++||++++..
T Consensus 168 ra~~i---------------------------p~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L 220 (323)
T KOG0594|consen 168 RAFSI---------------------------PMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL 220 (323)
T ss_pred HHhcC---------------------------CcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence 75431 22224456899999999999963 589999999999999999999
Q ss_pred chhh
Q 002580 898 FPIL 901 (905)
Q Consensus 898 F~~~ 901 (905)
|+..
T Consensus 221 FpG~ 224 (323)
T KOG0594|consen 221 FPGD 224 (323)
T ss_pred CCCC
Confidence 9754
No 43
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.7e-33 Score=318.94 Aligned_cols=204 Identities=30% Similarity=0.513 Sum_probs=177.0
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++.+++.+
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 118 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEE
Confidence 45568999999999999999999999999999999999764333444556678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+|||||+|++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 9999999999999998753 3889999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
. .......+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred C--------------------------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 0 011234679999999999863 3589999999999999999999963
No 44
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.8e-33 Score=312.99 Aligned_cols=193 Identities=38% Similarity=0.644 Sum_probs=169.3
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 757 (905)
+.||+|+||.||+|.+..+|+.||+|++++...........+.+|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998754444555667889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchh
Q 002580 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (905)
Q Consensus 758 ~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~ 837 (905)
+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~---------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD---------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC----------
Confidence 999998764 45899999999999999999999999999999999999999999999999998542100
Q ss_pred hhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~ 196 (323)
T cd05571 149 -----------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred -----------------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCC
Confidence 011234679999999999974 458999999999999999999995
No 45
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.3e-33 Score=317.90 Aligned_cols=204 Identities=31% Similarity=0.495 Sum_probs=176.3
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.+..++|.+.+.||+|+||.||+|.+..++..||+|++.+...........+..|+.+++.++||||+++++++.+.+.+
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~ 118 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL 118 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 35567999999999999999999999999999999999765333444455678899999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+|||||+||+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999998653 4889999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
. .......+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 196 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~ 249 (370)
T cd05596 196 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (370)
T ss_pred C--------------------------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCC
Confidence 0 011234579999999999863 3489999999999999999999964
No 46
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=338.21 Aligned_cols=206 Identities=32% Similarity=0.500 Sum_probs=186.8
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
++..++|.+++.||+|+||.|.+++++.|++.||+|++++-.+..+.....|..|.++|...+.+-|++++..|+++.++
T Consensus 71 rl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L 150 (1317)
T KOG0612|consen 71 RLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYL 150 (1317)
T ss_pred hCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence 56678999999999999999999999999999999999987676777888999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+|||||+||+|..++.+.. ++++..++.|+..|+.||.-||+.|+|||||||+|||||..|++||+|||.|-....
T Consensus 151 YlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~- 227 (1317)
T KOG0612|consen 151 YLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA- 227 (1317)
T ss_pred EEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCC-
Confidence 99999999999999998754 699999999999999999999999999999999999999999999999999865442
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.....+...+|||.|++||++.. ...+|.||+||++|||++|..||+
T Consensus 228 -------------------------dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 228 -------------------------DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred -------------------------CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 22335567799999999999981 348899999999999999999997
Q ss_pred hh
Q 002580 900 IL 901 (905)
Q Consensus 900 ~~ 901 (905)
..
T Consensus 283 ad 284 (1317)
T KOG0612|consen 283 AD 284 (1317)
T ss_pred HH
Confidence 53
No 47
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.6e-33 Score=316.52 Aligned_cols=227 Identities=31% Similarity=0.520 Sum_probs=177.9
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++|+||++++++|.+.+.+|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999998654444455677888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||+|++|.+++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++..........
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999999764 348999999999999999999999999999999999999999999999999987543211100
Q ss_pred CC------cchhhhcc--ccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LP------TTNEKKRR--HKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. ........ ........+...........+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 00 00000000 0000000000001112235689999999999874 4589999999999999999999953
No 48
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-33 Score=310.17 Aligned_cols=202 Identities=27% Similarity=0.398 Sum_probs=182.0
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 748 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~ 748 (905)
....|.+.+.||.|.||.||.|..+.||+.+|+|++++...........+.+|+.+|+++. ||||+.++++|++...++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3568999999999999999999999999999999999887666667788999999999998 999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC----CCcEEEEeccCcccc
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLSCLT 824 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~----~~~vkL~DFG~s~~~ 824 (905)
+|||+|.||.|++.+... .+++..+..++.|++.++.|||+.||+||||||+|+|+.. ++.+|++|||++...
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~ 189 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI 189 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence 999999999999999876 2999999999999999999999999999999999999953 357999999999775
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.. .......+||+.|+|||++.. ....|+||+|+++|.|++|..||...
T Consensus 190 ~~----------------------------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~ 241 (382)
T KOG0032|consen 190 KP----------------------------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE 241 (382)
T ss_pred cC----------------------------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence 42 123456799999999999993 45999999999999999999999765
Q ss_pred h
Q 002580 902 C 902 (905)
Q Consensus 902 ~ 902 (905)
.
T Consensus 242 ~ 242 (382)
T KOG0032|consen 242 T 242 (382)
T ss_pred C
Confidence 4
No 49
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=6.3e-33 Score=308.53 Aligned_cols=193 Identities=37% Similarity=0.655 Sum_probs=168.6
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 757 (905)
+.||+|+||.||++.+..+|..||+|++.+...........+.+|+.+++.++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998764444455667788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchh
Q 002580 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (905)
Q Consensus 758 ~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~ 837 (905)
+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--------- 149 (323)
T cd05595 81 ELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--------- 149 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC---------
Confidence 999988764 358999999999999999999999999999999999999999999999999985421100
Q ss_pred hhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~ 196 (323)
T cd05595 150 ------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (323)
T ss_pred ------------------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCC
Confidence 11224579999999999974 458999999999999999999995
No 50
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=7e-33 Score=308.84 Aligned_cols=193 Identities=39% Similarity=0.657 Sum_probs=169.3
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 757 (905)
+.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999999999999999998765445556677889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchh
Q 002580 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (905)
Q Consensus 758 ~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~ 837 (905)
+|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~---------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD---------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc----------
Confidence 999988764 45899999999999999999999999999999999999999999999999998542110
Q ss_pred hhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 149 -----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~ 196 (328)
T cd05593 149 -----------------AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 196 (328)
T ss_pred -----------------ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCC
Confidence 011234579999999999874 468999999999999999999995
No 51
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=295.97 Aligned_cols=201 Identities=22% Similarity=0.333 Sum_probs=175.9
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----CC
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----~~ 745 (905)
...|..++.||.|+||.|+.+.+..+|..||+|.+... +.+....++..+|+.+|+.++|+||+.+++++.. -+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 34566689999999999999999999999999998754 4566778899999999999999999999999875 35
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
.+|+|+|+| +.+|...++.+ ..+++..+..+++||+.||+|+|+.+|+||||||+|+|++.+..+||||||+|+...
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLD 176 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecc
Confidence 799999999 78999999875 349999999999999999999999999999999999999999999999999998754
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. ......+.++.|.+|.|||++.. +...||||+|||+.||++|++.|+.
T Consensus 177 ~~-------------------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG 230 (359)
T KOG0660|consen 177 KF-------------------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPG 230 (359)
T ss_pred cc-------------------------CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCC
Confidence 22 01123467889999999999983 4588999999999999999999974
No 52
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.9e-33 Score=309.89 Aligned_cols=202 Identities=34% Similarity=0.510 Sum_probs=174.3
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||++++++|.+++.+|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999999999999999998643334445667888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++|++|.+++.+. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 157 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-- 157 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--
Confidence 999999999999753 24589999999999999999999999999999999999999999999999999855321110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......+||+.|+|||++.. ..++|+|||||++|+|++|+.||..
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 158 ------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 01123469999999999862 3489999999999999999999954
No 53
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=7.9e-33 Score=306.24 Aligned_cols=192 Identities=35% Similarity=0.574 Sum_probs=168.3
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..++||||++++++|...+..|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999999999999999999865444455667788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 002580 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (905)
Q Consensus 760 ~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~ 839 (905)
.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~------------ 146 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD------------ 146 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC------------
Confidence 9999764 45899999999999999999999999999999999999999999999999998642211
Q ss_pred ccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 147 ---------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 147 ---------------DDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred ---------------CCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCC
Confidence 011234579999999999984 4589999999999999999999953
No 54
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-35 Score=288.96 Aligned_cols=200 Identities=26% Similarity=0.364 Sum_probs=175.8
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
..+.|.+.+.||+|.|+.|++|.+..||+.||+|+++...+.. ...+.+.+|+.|.+.|+||||+++++.+...+..||
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl 87 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 87 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence 3578999999999999999999999999999999998765544 367889999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC---CCcEEEEeccCccccCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~---~~~vkL~DFG~s~~~~~ 826 (905)
|+|++.|++|..-+-.+ ..+++..+..+++||+.+|.|||.+||||||+||.|+|+-+ ...+||+|||++...+
T Consensus 88 vFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~- 164 (355)
T KOG0033|consen 88 VFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN- 164 (355)
T ss_pred EEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC-
Confidence 99999999987666543 44899999999999999999999999999999999999953 3469999999997655
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
+ ....-.++|||.|||||++.. ...+|+|+.|++||-|+.|.+||..
T Consensus 165 ~---------------------------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~ 214 (355)
T KOG0033|consen 165 D---------------------------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 214 (355)
T ss_pred C---------------------------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCC
Confidence 1 112346799999999999984 4589999999999999999999965
No 55
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-34 Score=303.26 Aligned_cols=206 Identities=31% Similarity=0.507 Sum_probs=186.8
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
+++..+.|+.-++||+|+||.||-|+...||+.||+|.+.+..+..+......++|..+|.+++.++||.+-..|++.+.
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~ 259 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDA 259 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCc
Confidence 56778889999999999999999999999999999999988777666777788899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
+|+||..|.||+|.-+|.+.++..|++..++.++.+|+.||.+||+.+||+|||||+|||+|+.|+++|+|+|+|..+..
T Consensus 260 LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 260 LCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred eEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999999999888878899999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
. ......+||.+|||||++.. ....|-|||||+||+|+.|+.||.-
T Consensus 340 g----------------------------~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 340 G----------------------------KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred C----------------------------CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 2 12234589999999999984 3478999999999999999999963
No 56
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=6.8e-33 Score=309.36 Aligned_cols=202 Identities=32% Similarity=0.464 Sum_probs=174.1
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+++++++.+.+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47999999999999999999999999999999997643334445566788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++||+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT-- 157 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc--
Confidence 9999999999997642 3589999999999999999999999999999999999999999999999999865431110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......+||+.|+|||++.+ ..++|+|||||+||+|++|+.||..
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 158 ------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 01123579999999999863 3489999999999999999999953
No 57
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.7e-32 Score=305.33 Aligned_cols=198 Identities=31% Similarity=0.568 Sum_probs=171.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCC-CcceEEEEEEeCCeEEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~lV~ 751 (905)
+|++++.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+.|+ +|+.+++++...+.+|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 588999999999999999999999999999999875444445567788899999999765 6888999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~---- 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG---- 154 (324)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC----
Confidence 999999999998764 34899999999999999999999999999999999999999999999999998532100
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~ 202 (324)
T cd05587 155 -----------------------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202 (324)
T ss_pred -----------------------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 011234579999999999985 458999999999999999999995
No 58
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-33 Score=309.99 Aligned_cols=202 Identities=22% Similarity=0.407 Sum_probs=182.5
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe-EEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH-VCL 749 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~-~~l 749 (905)
.++|..++++|+|+||.+++++++..+..|++|.+....... .......+|+.+++++.|||||.+++.|..++. +||
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~-~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE-PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc-hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 568999999999999999999999999999999998764433 344477899999999999999999999998887 999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||+||+||+|.+.+.++....|+++.+..++.|++.|+.|||++.|+|||||+.|||++.++.|+|.|||+|+..+...
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 9999999999999998877789999999999999999999999999999999999999999999999999998865332
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
....+.+|||.||+||++.+ ..++|+|||||++|||++-+++|..
T Consensus 161 --------------------------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a 208 (426)
T KOG0589|consen 161 --------------------------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKA 208 (426)
T ss_pred --------------------------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCc
Confidence 13457899999999999995 4599999999999999999999964
No 59
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.7e-32 Score=305.02 Aligned_cols=199 Identities=31% Similarity=0.550 Sum_probs=171.5
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
+|.+.+.||+|+||.||+|.+..++..||+|++.+...........+..|..++..+ .|++|+++++++...+.+|+||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 588999999999999999999999999999999876443444555677788888777 5899999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~---- 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD---- 154 (323)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC----
Confidence 999999999998764 34899999999999999999999999999999999999999999999999998542210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ +.++|+|||||++|+|++|+.||..
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~ 203 (323)
T cd05616 155 -----------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 203 (323)
T ss_pred -----------------------CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCC
Confidence 011234579999999999984 4589999999999999999999964
No 60
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-33 Score=298.85 Aligned_cols=201 Identities=27% Similarity=0.397 Sum_probs=180.4
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.+=|.+.+.||+|-|+.|-++++.-||..||||++.+..+ +.-....+.+|+.+|+.++|||||++|.+......+|||
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl-D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL-DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc-chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 4569999999999999999999999999999999998755 334456788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEE-cCCCcEEEEeccCccccCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl-~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
+|+-.+|+|++|+.++. ..+++..+.+++.||+.|+.|||+..+|||||||+|+.+ ..-|-+||.|||++-..
T Consensus 96 LELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf----- 169 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKF----- 169 (864)
T ss_pred EEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccC-----
Confidence 99999999999998874 459999999999999999999999999999999999976 56789999999998442
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHHHhCCCCchhh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.++....++||+..|.|||++.|. ++.||||||||||.|++|++||..+
T Consensus 170 -----------------------~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA 222 (864)
T KOG4717|consen 170 -----------------------QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA 222 (864)
T ss_pred -----------------------CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc
Confidence 234556788999999999999963 5899999999999999999999864
No 61
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-32 Score=304.95 Aligned_cols=197 Identities=36% Similarity=0.625 Sum_probs=168.4
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHH---HhCCCCCcceEEEEEEeCCeEEEE
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL---DMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il---~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
|++++.||+|+||.||+|.+..+++.||+|++++...........+..|+.++ +.++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 77899999999999999999999999999999865433344456677776665 456799999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~--- 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF--- 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC---
Confidence 999999999988754 35899999999999999999999999999999999999999999999999998532110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 155 ------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~ 203 (324)
T cd05589 155 ------------------------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPG 203 (324)
T ss_pred ------------------------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCC
Confidence 011235679999999999874 4589999999999999999999963
No 62
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.7e-33 Score=311.69 Aligned_cols=227 Identities=34% Similarity=0.527 Sum_probs=179.4
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++..++|+||+++++++.+++.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999999999999999998754444455677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..........
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 999999999999875 459999999999999999999999999999999999999999999999999987654322100
Q ss_pred CCcchhhhccccCCCCc--ccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNP--VFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
................. ..............||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 00000000000000000 000000112335679999999999984 4599999999999999999999964
No 63
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.2e-32 Score=304.97 Aligned_cols=193 Identities=32% Similarity=0.580 Sum_probs=168.7
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ +||||++++++|.+.+.+|+|||||+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3689999999999999999999999999876544455566788899999888 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~--------- 149 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP--------- 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC---------
Confidence 9999988764 45999999999999999999999999999999999999999999999999998532100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 150 ------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 011234679999999999984 458999999999999999999996
No 64
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.2e-32 Score=306.49 Aligned_cols=193 Identities=38% Similarity=0.651 Sum_probs=168.0
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 757 (905)
+.||+|+||.||+|.+..++..||+|++.+...........+..|+.++..++||||++++++|...+.+|+||||++++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999999999999999998764444555667788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 758 ~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
+|..++... ..+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~--------- 149 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD--------- 149 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC---------
Confidence 999988764 458999999999999999999997 79999999999999999999999999998542110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~ 197 (325)
T cd05594 150 ------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 197 (325)
T ss_pred ------------------CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCC
Confidence 011224579999999999874 458999999999999999999994
No 65
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.7e-32 Score=306.38 Aligned_cols=202 Identities=31% Similarity=0.471 Sum_probs=173.3
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||++.+..+++.||+|++.+...........+..|+.++..++|+||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999997643333444556788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++|+|.+++.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 9999999999997642 358999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCcccccccccc--------CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--------AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--------~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++. ...++|+|||||++|+|++|+.||..
T Consensus 157 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 157 -----------------------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred -----------------------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 01122357999999999985 14589999999999999999999964
No 66
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.1e-32 Score=302.03 Aligned_cols=193 Identities=36% Similarity=0.682 Sum_probs=165.5
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++++...........+..|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999999999999999999875433344455666777777654 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 81 g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-------- 150 (316)
T cd05592 81 GDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-------- 150 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--------
Confidence 9999998764 358999999999999999999999999999999999999999999999999986432110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 151 -------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~ 197 (316)
T cd05592 151 -------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred -------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCC
Confidence 11234579999999999874 458999999999999999999996
No 67
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.9e-32 Score=302.96 Aligned_cols=194 Identities=36% Similarity=0.618 Sum_probs=167.6
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+ +||||++++++|...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 4689999999999999999999999999875444445566777899988876 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~--------- 149 (321)
T cd05591 81 GDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN--------- 149 (321)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC---------
Confidence 9999988764 34899999999999999999999999999999999999999999999999998542211
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~ 198 (321)
T cd05591 150 ------------------GVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEA 198 (321)
T ss_pred ------------------CccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCC
Confidence 011234579999999999874 4589999999999999999999963
No 68
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.9e-32 Score=302.20 Aligned_cols=199 Identities=32% Similarity=0.557 Sum_probs=170.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~ 751 (905)
+|.+.+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+. |++|+++++++.+.+.+|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999999999999999998654334445567778888988885 577889999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++|++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~---- 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD---- 154 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC----
Confidence 999999999998764 35999999999999999999999999999999999999999999999999998542210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 155 -----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~ 203 (323)
T cd05615 155 -----------------------GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 203 (323)
T ss_pred -----------------------CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCC
Confidence 011234579999999999874 4589999999999999999999964
No 69
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-32 Score=307.33 Aligned_cols=202 Identities=33% Similarity=0.550 Sum_probs=175.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||+|.+..+++.||+|++++...........+..|+.+++.++|+||+++++++.+.+.+|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47999999999999999999999999999999998764434455667889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++.+.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~-- 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM-- 157 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--
Confidence 9999999999998752 3599999999999999999999999999999999999999999999999999865431110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......||+.|+|||++.. ..++|+|||||++|+|++|..||..
T Consensus 158 ------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 211 (330)
T cd05601 158 ------------------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHE 211 (330)
T ss_pred ------------------------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCC
Confidence 01123478999999999862 3589999999999999999999953
No 70
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.8e-32 Score=298.56 Aligned_cols=199 Identities=23% Similarity=0.336 Sum_probs=169.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.+.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++.+....|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--cccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 4689999999999999999999999999999999875422 12234567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 157 (303)
T cd07869 82 FEYV-HTDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-- 157 (303)
T ss_pred EECC-CcCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--
Confidence 9999 568888876543 458899999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+|+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 158 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~ 206 (303)
T cd07869 158 -------------------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPG 206 (303)
T ss_pred -------------------------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 11123468999999999863 3478999999999999999999964
No 71
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.3e-32 Score=302.66 Aligned_cols=193 Identities=33% Similarity=0.579 Sum_probs=168.1
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++++...........+..|+.++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3689999999999999999999999999876544555666788899888776 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~--------- 149 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP--------- 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC---------
Confidence 9999888764 45999999999999999999999999999999999999999999999999998542100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 150 ------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred ------------------CCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 011234679999999999984 458999999999999999999995
No 72
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-33 Score=306.85 Aligned_cols=205 Identities=20% Similarity=0.276 Sum_probs=175.3
Q ss_pred ccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 665 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
..+.+..+...+...||+|.||+||+|.+-+ .||||+++.... .+...+.|++|+.+|++-+|.||+-+.|+|..+
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~p-t~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDP-TPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCC-CHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 4456677788899999999999999999843 499999987643 556889999999999999999999999999887
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
.. .||+.+|+|.+|+.+++... ..|.....+.|++||++|+.|||.++|||||||..|||+.++++|||+|||++...
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 76 99999999999999998764 34999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc------CCCCchHHHHHHHHHHHHhCCCCc
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF------AYTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~------~~~~sDiwSlGvil~elltg~~PF 898 (905)
.. | ........--|..-|||||++. .+..+||||||+++|||++|.+||
T Consensus 539 ~~-----------------------w--~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPy 593 (678)
T KOG0193|consen 539 TR-----------------------W--SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPY 593 (678)
T ss_pred ee-----------------------e--ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCc
Confidence 21 1 0111122335778899999998 245999999999999999999999
Q ss_pred hh
Q 002580 899 PI 900 (905)
Q Consensus 899 ~~ 900 (905)
..
T Consensus 594 si 595 (678)
T KOG0193|consen 594 SI 595 (678)
T ss_pred CC
Confidence 84
No 73
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.98 E-value=3.7e-32 Score=302.02 Aligned_cols=194 Identities=35% Similarity=0.622 Sum_probs=167.2
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|..++..+ +||||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 3689999999999999999999999999865443444566777888888876 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~--------- 149 (320)
T cd05590 81 GDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN--------- 149 (320)
T ss_pred chHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC---------
Confidence 9999988764 35899999999999999999999999999999999999999999999999998542100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 150 ------------------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred ------------------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 011234579999999999884 4589999999999999999999954
No 74
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=3.9e-32 Score=303.32 Aligned_cols=199 Identities=38% Similarity=0.622 Sum_probs=169.3
Q ss_pred CeeecccccccCceEEEEEEEc---CCCeEEEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~---~t~~~vavK~~~~~~~~-~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 747 (905)
+|++++.||+|+||.||+|.+. .++..||+|++.+.... .......+..|+.++..+ +|+||+++++++...+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4899999999999999999874 47899999999764322 223445678899999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~ 158 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSE 158 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccccc
Confidence 9999999999999998764 34899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
. .......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 159 ~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 159 E--------------------------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred C--------------------------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCC
Confidence 0 011234579999999999874 348999999999999999999995
No 75
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-33 Score=300.94 Aligned_cols=198 Identities=25% Similarity=0.387 Sum_probs=176.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
..|+.++.||+|.||.||+|.+..+++.||+|++... ........+++|+.+|.+++++||.++|+.|..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le--~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLE--EAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechh--hcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 4578889999999999999999999999999999865 34556788999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||.||++.++++.. ..+.+..+..++++++.||.|||.++.+|||||+.|||+..+|.+||+|||++..+..
T Consensus 91 ey~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~----- 163 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN----- 163 (467)
T ss_pred HHhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec-----
Confidence 999999999999764 3358888899999999999999999999999999999999999999999999865431
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......+++|||.|||||++.+ ..++||||||++.|||.+|.+||..
T Consensus 164 ----------------------~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~ 213 (467)
T KOG0201|consen 164 ----------------------TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSK 213 (467)
T ss_pred ----------------------hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcc
Confidence 1223368899999999999984 4599999999999999999999964
No 76
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.98 E-value=5.2e-32 Score=296.13 Aligned_cols=199 Identities=22% Similarity=0.291 Sum_probs=169.6
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.+.+.||.|+||.||+|.+..++..||+|.++... .......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH--EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc--cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 568999999999999999999999999999999987542 122234567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+. ++|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 82 FEYLD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred EeCCC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 99996 58998887543 357899999999999999999999999999999999999999999999999986432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+|+.|+|||++.+ ..++|+|||||++|+|++|++||..
T Consensus 158 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~ 206 (288)
T cd07871 158 -------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPG 206 (288)
T ss_pred -------------------------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01123468999999999863 4589999999999999999999953
No 77
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.98 E-value=4.1e-32 Score=301.99 Aligned_cols=193 Identities=38% Similarity=0.634 Sum_probs=163.9
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654333334445555655 45778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH--------- 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998542110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~ 197 (323)
T cd05575 150 ------------------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (323)
T ss_pred ------------------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCC
Confidence 011234579999999999874 458999999999999999999995
No 78
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=303.55 Aligned_cols=207 Identities=25% Similarity=0.354 Sum_probs=175.0
Q ss_pred CccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 664 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 664 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
...+.+....+++++.||+|.||.||.|.+..+ ..||+|.++...+ ..+.|.+|+++|++|+|+|||++++++..
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m----~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~ 272 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSM----SPEAFLREAQIMKKLRHEKLVKLYGVCTK 272 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC-CcccceEEecccc----ChhHHHHHHHHHHhCcccCeEEEEEEEec
Confidence 455667788899999999999999999999433 4799999987633 23567799999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
++.+|||||||+.|+|.++|+......+...+.+.++.|||.||+||+++++|||||-..|||+++++.+||+|||+|+.
T Consensus 273 ~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~ 352 (468)
T KOG0197|consen 273 QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARL 352 (468)
T ss_pred CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccc
Confidence 88999999999999999999986667799999999999999999999999999999999999999999999999999985
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH-hCCCCch
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF-MEFQPFP 899 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell-tg~~PF~ 899 (905)
...+... .....--...|.|||.+.. +.+|||||||++||||+ .|+.||+
T Consensus 353 ~~d~~Y~--------------------------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~ 406 (468)
T KOG0197|consen 353 IGDDEYT--------------------------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYP 406 (468)
T ss_pred cCCCcee--------------------------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCC
Confidence 4322111 1111122347999999983 56999999999999999 5788886
Q ss_pred hh
Q 002580 900 IL 901 (905)
Q Consensus 900 ~~ 901 (905)
..
T Consensus 407 ~m 408 (468)
T KOG0197|consen 407 GM 408 (468)
T ss_pred CC
Confidence 43
No 79
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.98 E-value=6e-32 Score=295.05 Aligned_cols=200 Identities=21% Similarity=0.283 Sum_probs=170.2
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++..++.+|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE-NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc-cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 479999999999999999999999999999999976422 2334566788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++++.+..+... ...+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 155 (287)
T cd07848 80 EYVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-- 155 (287)
T ss_pred ecCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc--
Confidence 99988766655433 24589999999999999999999999999999999999999999999999999865431110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......||+.|+|||++.+ ..++|+|||||++|+|++|++||+.
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~ 203 (287)
T cd07848 156 ------------------------ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPG 203 (287)
T ss_pred ------------------------ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCC
Confidence 11224578999999999874 4589999999999999999999964
No 80
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.98 E-value=8.5e-32 Score=293.95 Aligned_cols=200 Identities=30% Similarity=0.466 Sum_probs=172.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|++.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||+++++++..++.+|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 48889999999999999999999999999999976543333344567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.......+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE---- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----
Confidence 9999999988876545569999999999999999999999999999999999999999999999999986532110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+|++.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 157 ------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~ 203 (285)
T cd05605 157 ------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQ 203 (285)
T ss_pred ------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCC
Confidence 1123478999999999874 4589999999999999999999953
No 81
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.98 E-value=5.6e-32 Score=302.83 Aligned_cols=206 Identities=24% Similarity=0.324 Sum_probs=168.3
Q ss_pred cccCCCeeecccccccCceEEEEEEEc-----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 741 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~ 741 (905)
++..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.++..+ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~ 80 (338)
T cd05102 3 EFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGAC 80 (338)
T ss_pred ccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEe
Confidence 456679999999999999999999752 345689999987532 233456788999999999 899999999988
Q ss_pred EeC-CeEEEEEeccCCCCHHHHHhhCC-----------------------------------------------------
Q 002580 742 QTK-THVCLITDYCPGGELFLLLDRQP----------------------------------------------------- 767 (905)
Q Consensus 742 ~~~-~~~~lV~E~~~gg~L~~~l~~~~----------------------------------------------------- 767 (905)
... +.+|++||||++|+|.+++....
T Consensus 81 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 81 TKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred cCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 754 46899999999999999987532
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhc
Q 002580 768 -------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKR 840 (905)
Q Consensus 768 -------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~ 840 (905)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~---------- 230 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY---------- 230 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcch----------
Confidence 124778888999999999999999999999999999999999999999999998654311110
Q ss_pred cccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 841 RHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......+++.|+|||++.+ +.++|+|||||+||+|++ |..||+.
T Consensus 231 ---------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~ 279 (338)
T cd05102 231 ---------------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 279 (338)
T ss_pred ---------------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCC
Confidence 01123346788999999874 569999999999999996 9999964
No 82
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.98 E-value=4.1e-33 Score=293.52 Aligned_cols=193 Identities=23% Similarity=0.380 Sum_probs=163.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----CeE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~ 747 (905)
.|.-.+.+|+|+||.||.+....++..+|||..-... ..-.+|+++|+.++|||||++..+|... -+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~-------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK-------RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC-------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 5888899999999999999999999999999875431 2234699999999999999999888632 256
Q ss_pred EEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-CcEEEEeccCcccc
Q 002580 748 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 824 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-~~vkL~DFG~s~~~ 824 (905)
.+||||++ .+|.++++. ..+..++...+.-+..||++||.|||+.|||||||||.|+|+|.+ |.+||||||.|+.+
T Consensus 98 nlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 98 NLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 79999995 699988874 123458888899999999999999999999999999999999976 89999999999876
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
... ....++..|..|.|||.+.| +++.|+||.||++.||+-|++-|+.
T Consensus 177 ~~~----------------------------epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG 228 (364)
T KOG0658|consen 177 VKG----------------------------EPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG 228 (364)
T ss_pred ccC----------------------------CCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC
Confidence 422 12346789999999999996 4599999999999999999999975
Q ss_pred h
Q 002580 901 L 901 (905)
Q Consensus 901 ~ 901 (905)
.
T Consensus 229 ~ 229 (364)
T KOG0658|consen 229 D 229 (364)
T ss_pred C
Confidence 4
No 83
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.98 E-value=5.1e-32 Score=300.97 Aligned_cols=193 Identities=38% Similarity=0.628 Sum_probs=163.4
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++||||+++++++.+.+..|+|||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999999999999999998654333333445555554 57788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~--------- 149 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP--------- 149 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC---------
Confidence 9999888764 45899999999999999999999999999999999999999999999999998542110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (321)
T cd05603 150 ------------------EETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (321)
T ss_pred ------------------CCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCC
Confidence 011234579999999999874 458999999999999999999995
No 84
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.98 E-value=6e-32 Score=301.23 Aligned_cols=193 Identities=33% Similarity=0.578 Sum_probs=168.4
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|+.++..+ +||||+.+++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3689999999999999999999999999876544455667788999999888 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~--------- 149 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP--------- 149 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC---------
Confidence 9999988764 35999999999999999999999999999999999999999999999999998542100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||+||+|++|..||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~ 197 (327)
T cd05617 150 ------------------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 197 (327)
T ss_pred ------------------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCC
Confidence 011234679999999999874 458999999999999999999995
No 85
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.98 E-value=6.4e-32 Score=300.74 Aligned_cols=193 Identities=36% Similarity=0.609 Sum_probs=162.2
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++.+...........+..|.. +++.++|+||+++++++...+.+|+||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46899999999999999999999999998653322223334444444 56778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~--------- 149 (325)
T cd05602 81 GELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH--------- 149 (325)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC---------
Confidence 9999999764 44889999999999999999999999999999999999999999999999998542110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|.+||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 197 (325)
T cd05602 150 ------------------NGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 197 (325)
T ss_pred ------------------CCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCC
Confidence 011234679999999999874 458999999999999999999995
No 86
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.9e-33 Score=293.41 Aligned_cols=206 Identities=30% Similarity=0.533 Sum_probs=184.3
Q ss_pred cccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 002580 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 744 (905)
Q Consensus 666 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 744 (905)
.+.+...+|.++.+||+|+||.|.++..+.|.+.||||++++..+...++++....|-.+|... +-|++++++.+|+.-
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTm 422 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTM 422 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhh
Confidence 3467788999999999999999999999999999999999999888888888888899999876 578999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
+.+|+||||+.||+|...+++-+ .+.+..+..++..|+-||-|||++||++||||.+|||++.+|.+||+|||+++..
T Consensus 423 DRLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 423 DRLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred hheeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc
Confidence 99999999999999999998754 4999999999999999999999999999999999999999999999999999542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
- -....+.++||||.|+|||++.. ....|.||+||+||||+.|++||..
T Consensus 501 i---------------------------~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 501 I---------------------------FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred c---------------------------cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence 1 02234568999999999999984 3477999999999999999999963
No 87
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.98 E-value=5.2e-32 Score=301.49 Aligned_cols=194 Identities=38% Similarity=0.620 Sum_probs=164.7
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHH-HHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+|+.||+|++.+...........+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46899999999999999999999999998654333444455556655 46778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~--------- 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ--------- 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC---------
Confidence 9999888764 45899999999999999999999999999999999999999999999999998542100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (325)
T cd05604 150 ------------------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYC 198 (325)
T ss_pred ------------------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCC
Confidence 011234579999999999874 4589999999999999999999953
No 88
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=2.4e-32 Score=300.30 Aligned_cols=231 Identities=32% Similarity=0.517 Sum_probs=186.6
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.++...|..++.||-|+||.|+++...+|...||+|.+.+.....++.+..+..|.+||..-+++.||+||..|++++++
T Consensus 625 KMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL 704 (1034)
T KOG0608|consen 625 KMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL 704 (1034)
T ss_pred hccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce
Confidence 45677899999999999999999999999999999999988777888888999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||+|++||++..+|.+. +.|.+..++.++..+.+|+++.|..|+|||||||+|||||.+|.+||+|||+|+-..-.
T Consensus 705 YFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999999999875 45999999999999999999999999999999999999999999999999998654321
Q ss_pred C-CCCCCcchhhhccccC--------CCCccccc-----c-cccccccccCCcccccccccc--CC-CCchHHHHHHHHH
Q 002580 828 P-QLLLPTTNEKKRRHKG--------QQNPVFMA-----E-PMRASNSFVGTEEYIAPVSDF--AY-TRMTRYNYLILVS 889 (905)
Q Consensus 828 ~-~~~~~~~~~~~~~~~~--------~~~~~~~~-----~-~~~~~~~~~gT~~Y~APE~l~--~~-~~sDiwSlGvil~ 889 (905)
. ...+....+.+...-. ....-++. . .-...-..+||+.|+|||++. |+ ..+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 1 1111111111000000 00000000 0 001223568999999999998 44 4789999999999
Q ss_pred HHHhCCCCchh
Q 002580 890 KKFMEFQPFPI 900 (905)
Q Consensus 890 elltg~~PF~~ 900 (905)
+|+.|++||-.
T Consensus 863 em~~g~~pf~~ 873 (1034)
T KOG0608|consen 863 EMLVGQPPFLA 873 (1034)
T ss_pred HHhhCCCCccC
Confidence 99999999943
No 89
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.98 E-value=5.7e-33 Score=302.17 Aligned_cols=193 Identities=23% Similarity=0.379 Sum_probs=168.5
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
+++..+...-++-||.|+.|.||+++. .++.||||.++. .-..+|+.|++|+|+||+.|.++|....+
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl--~netVAVKKV~e----------lkETdIKHLRkLkH~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRL--HNETVAVKKVRE----------LKETDIKHLRKLKHPNIITFKGVCTQSPC 186 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeec--cCceehhHHHhh----------hhhhhHHHHHhccCcceeeEeeeecCCce
Confidence 445555556677899999999999998 578899997642 22347888999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
+|||||||..|-|+.+|+.. ..++......+..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++..+.
T Consensus 187 yCIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~ 264 (904)
T KOG4721|consen 187 YCIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSD 264 (904)
T ss_pred eEEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhh
Confidence 99999999999999999874 4588899999999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
. .....|+||..|||||++.. +.|.|||||||+||||+||..||..+
T Consensus 265 ~----------------------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdV 314 (904)
T KOG4721|consen 265 K----------------------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDV 314 (904)
T ss_pred h----------------------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCcccc
Confidence 2 12347899999999999994 67999999999999999999999765
No 90
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.98 E-value=1.3e-31 Score=291.73 Aligned_cols=194 Identities=29% Similarity=0.474 Sum_probs=166.9
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++|+||++++++|.....+|+||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999999999999999998765443444456778899999999999999999999999999999999999999
Q ss_pred HHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchh
Q 002580 760 FLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (905)
Q Consensus 760 ~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~ 837 (905)
..++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~--------- 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ--------- 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC---------
Confidence 8887532 23468999999999999999999999999999999999999999999999999986533111
Q ss_pred hhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......||+.|+|||++.+ +.++|+|||||++|+|++|+.||..
T Consensus 152 ------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 152 ------------------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred ------------------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 11224578999999999984 4589999999999999999999964
No 91
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.98 E-value=8.4e-32 Score=298.58 Aligned_cols=193 Identities=35% Similarity=0.653 Sum_probs=165.1
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..++..||+|++++..............|..++..+ +||||+++++++.+.+.+|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 4689999999999999999999999999865433333455667788888764 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998532100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~ 197 (316)
T cd05620 150 ------------------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred ------------------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCC
Confidence 011234679999999999974 458999999999999999999995
No 92
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.98 E-value=8.5e-32 Score=299.48 Aligned_cols=195 Identities=40% Similarity=0.649 Sum_probs=165.6
Q ss_pred cccccccCceEEEEEEEc---CCCeEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 677 IKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~---~t~~~vavK~~~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
++.||+|+||.||+|.+. .+++.||+|++++.... .......+..|+.+++.++||||++++++|..++.+|+|||
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 367999999999999874 46889999999864321 22334567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.+. +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 153 (323)
T cd05584 81 YLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE----- 153 (323)
T ss_pred CCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-----
Confidence 99999999999764 45889999999999999999999999999999999999999999999999998532110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 154 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~ 202 (323)
T cd05584 154 ----------------------GTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTA 202 (323)
T ss_pred ----------------------CCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCC
Confidence 011234579999999999974 4589999999999999999999964
No 93
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=2.7e-31 Score=296.55 Aligned_cols=198 Identities=25% Similarity=0.399 Sum_probs=174.2
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++++.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++..++.++
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 45679999999999999999999999999999999987542 3345567899999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 80 ICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 999999999999999764 3489999999999999999999986 6999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......||+.|+|||++.+ +.++|+|||||++|+|++|+.||.
T Consensus 158 -----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~ 203 (331)
T cd06649 158 -----------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIP 203 (331)
T ss_pred -----------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 1123578999999999984 458999999999999999999995
No 94
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=1.5e-31 Score=304.63 Aligned_cols=192 Identities=21% Similarity=0.283 Sum_probs=166.7
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+...+|.+++.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+++.++||||++++++|......|
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 159 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTC 159 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence 456789999999999999999999999999999996432 34678999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
+|||++ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 160 lv~e~~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 160 LILPRY-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred EEEecC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 999999 57898888764 348999999999999999999999999999999999999999999999999986422100
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||
T Consensus 237 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~ 283 (391)
T PHA03212 237 --------------------------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSL 283 (391)
T ss_pred --------------------------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCc
Confidence 011234679999999999874 45899999999999999999876
No 95
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-32 Score=280.61 Aligned_cols=201 Identities=25% Similarity=0.360 Sum_probs=170.4
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+|+.|--|....+|..||||++.+. ......++.+|++++.++ .|+||++++++|+++..+|||||.|.|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~G 160 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRG 160 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccC
Confidence 5689999999999999999999999999876 345667899999999998 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC---cEEEEeccCccccCCCCCCCCC
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~---~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
|.|...+.++ +.|++.++..+.++|+.||.|||.+||.||||||+|||....+ .+|||||.+..-+.......+.
T Consensus 161 GplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spa 238 (463)
T KOG0607|consen 161 GPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPA 238 (463)
T ss_pred chHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCC
Confidence 9999999875 4599999999999999999999999999999999999996544 5899999987543322211100
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCchhhhc
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFPILCR 903 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~~~~r 903 (905)
......+-+|+..|||||+... ..++|.||||||||-|+.|.+||..-|+
T Consensus 239 --------------------stP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg 296 (463)
T KOG0607|consen 239 --------------------STPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG 296 (463)
T ss_pred --------------------CCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence 1112345689999999999872 3589999999999999999999976554
No 96
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.98 E-value=1.3e-31 Score=296.92 Aligned_cols=193 Identities=35% Similarity=0.662 Sum_probs=164.9
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..+++.||+|++++..............|..++..+ +||||+++++++.+.+.+|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 4689999999999999999999999999875433333445667788888764 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--------- 149 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG--------- 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC---------
Confidence 9999999764 34889999999999999999999999999999999999999999999999998542110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ +.++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~ 197 (316)
T cd05619 150 ------------------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFH 197 (316)
T ss_pred ------------------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCC
Confidence 011234579999999999874 458999999999999999999995
No 97
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.97 E-value=1.3e-31 Score=301.79 Aligned_cols=197 Identities=24% Similarity=0.377 Sum_probs=167.9
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
....++|..++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++|+||+++++++...+.+
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 147 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI 147 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence 344678999999999999999999999999999999986542 334456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+|||||++++|... ....+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 148 ~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 148 QVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred EEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999999998643 23567788899999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~ 899 (905)
........||..|+|||++.. ..++|+|||||++|+|++|+.||.
T Consensus 222 ---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 274 (353)
T PLN00034 222 ---------------------------MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFG 274 (353)
T ss_pred ---------------------------cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCC
Confidence 011234579999999999842 238999999999999999999996
No 98
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=315.01 Aligned_cols=212 Identities=25% Similarity=0.289 Sum_probs=174.1
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEE-EEe---
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS-FQT--- 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~-~~~--- 743 (905)
+...++++.+.|.+|||+.||+|.+...|..||+|.+-.. +....+.+.+|+++|+.|. |+|||.|++. ...
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 3445678899999999999999999888899999988643 7778899999999999995 9999999993 321
Q ss_pred C---CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeCCCCCCCEEEcCCCcEEEEec
Q 002580 744 K---THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 744 ~---~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~g--IvHrDLKp~NILl~~~~~vkL~DF 818 (905)
. -.++|+||||.||.|-+++..+....|++.++++|+.+++.|+.+||... |||||||-+||||+.+|.+|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 1 25789999999999999998765666999999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHH
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKF 892 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~ell 892 (905)
|.++-...... ...+.. .....-....|+.|+|||++.- .+|+|||+|||+||.|+
T Consensus 191 GSatt~~~~~~----~~~e~~--------------~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLC 252 (738)
T KOG1989|consen 191 GSATTKILSPT----SAQEVN--------------YVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLC 252 (738)
T ss_pred cccccccCCCc----cHHHHH--------------HHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence 99864321111 110000 0111122357899999999982 46999999999999999
Q ss_pred hCCCCchhh
Q 002580 893 MEFQPFPIL 901 (905)
Q Consensus 893 tg~~PF~~~ 901 (905)
+...||+.-
T Consensus 253 y~t~PFe~s 261 (738)
T KOG1989|consen 253 YFTTPFEES 261 (738)
T ss_pred HhCCCcCcC
Confidence 999999864
No 99
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=1.3e-31 Score=299.42 Aligned_cols=199 Identities=19% Similarity=0.304 Sum_probs=166.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----CeE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----THV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~~ 747 (905)
+|++.+.||+|+||.||+|.+..++..||+|.+.... ........+.+|+.+++.++||||+++++++... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhh-ccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 5899999999999999999999999999999987532 2233445688999999999999999999988643 358
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||| +++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 80 YVVFELM-ESDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEEecC-CCCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999999 57899988764 34899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. ........+||+.|+|||++.+ ..++|+|||||++|+|++|++||.
T Consensus 157 ~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~ 209 (338)
T cd07859 157 TP------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP 209 (338)
T ss_pred cC------------------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCC
Confidence 10 0011234579999999999753 458999999999999999999995
No 100
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=5.3e-32 Score=301.34 Aligned_cols=203 Identities=28% Similarity=0.419 Sum_probs=183.2
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
+....+.|.+.+.||+|.|+.|.++.+..|+..||||++.+... +......+.+|+++|+.++|||||+++.+......
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~l-n~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQL-NPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhccc-ChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 34557789999999999999999999999999999999998755 44444558999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
+|+||||+.+|.+++++.+++ +..+..+..++.|++.+++|||+++|||||||.+||||+.+.++||+|||++....
T Consensus 130 lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred eEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999999998864 47789999999999999999999999999999999999999999999999996644
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......++||++.|.|||++.+ .+.+|+||+|++||.|+.|.+||..
T Consensus 207 ---------------------------~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG 257 (596)
T KOG0586|consen 207 ---------------------------YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDG 257 (596)
T ss_pred ---------------------------ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCC
Confidence 2234568899999999999996 4599999999999999999999973
No 101
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.9e-32 Score=300.19 Aligned_cols=199 Identities=25% Similarity=0.289 Sum_probs=168.1
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-eEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-HVCL 749 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-~~~l 749 (905)
.++|.....||+|+||.||+|.... +..||||.+....... ...|.+|+.++.+++|||+++|+|||.+.+ ..+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~-~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~L 149 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSD-GTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLL 149 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECC-CCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEE
Confidence 3678888899999999999999854 4889999877542211 345999999999999999999999999988 5999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~g---IvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
|+||+++|+|.+++.......++|....+|+.+++.||.|||... |+||||||+|||+|.++++||+|||+|+....
T Consensus 150 VYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 150 VYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE 229 (361)
T ss_pred EEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence 999999999999998754327899999999999999999999864 99999999999999999999999999955331
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccc-cCCcccccccccc---CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSF-VGTEEYIAPVSDF---AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gT~~Y~APE~l~---~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
. . ...... .||.+|+|||++. -+.++||||||++|+||++|+.|...
T Consensus 230 ~-~--------------------------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~ 280 (361)
T KOG1187|consen 230 G-D--------------------------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQ 280 (361)
T ss_pred c-c--------------------------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCC
Confidence 0 0 001111 7999999999997 35699999999999999999987753
No 102
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-33 Score=302.74 Aligned_cols=203 Identities=33% Similarity=0.557 Sum_probs=185.4
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.+...+++++..||-|+||.|-++........+|+|++++..+.+....+.+..|..||..++.|+||++|..|.++.++
T Consensus 416 ~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv 495 (732)
T KOG0614|consen 416 QVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV 495 (732)
T ss_pred ccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence 34567888999999999999999998666667999999998888888888999999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|++||-|-||.|...+... +.|.+..++.++.+++.|++|||++|||+|||||+|+|++.+|.+||.|||+|+.+..
T Consensus 496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~- 572 (732)
T KOG0614|consen 496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS- 572 (732)
T ss_pred hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc-
Confidence 9999999999999999875 4599999999999999999999999999999999999999999999999999988652
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...+.++||||.|.|||++. ...+.|.||||+++|||++|.+||..
T Consensus 573 ---------------------------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~ 621 (732)
T KOG0614|consen 573 ---------------------------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSG 621 (732)
T ss_pred ---------------------------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 23456899999999999998 35689999999999999999999964
No 103
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=1.7e-31 Score=296.31 Aligned_cols=193 Identities=35% Similarity=0.618 Sum_probs=167.6
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||+|+||.||+|.+..++..||+|++++...........+..|..++..+ +||||+++++++...+.+|+||||++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 4689999999999999999999999999876444445566778899999887 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~--------- 149 (318)
T cd05570 81 GDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG--------- 149 (318)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC---------
Confidence 9999988764 35999999999999999999999999999999999999999999999999998532100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+||+.|+|||++.+ +.++|+|||||++|+|++|..||.
T Consensus 150 ------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~ 197 (318)
T cd05570 150 ------------------GVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFE 197 (318)
T ss_pred ------------------CCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCC
Confidence 011234579999999999974 458999999999999999999995
No 104
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=4.6e-31 Score=317.47 Aligned_cols=221 Identities=23% Similarity=0.287 Sum_probs=177.1
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|++.+.||+|+||.||+|.+..+++.||+|++............++.+|+.+++.++||||+++++++.+++..|++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 36899999999999999999999999999999999765444445567789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 751 TDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
|||++|++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 99999999999986421 123456678889999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
.............. ...+.............+||+.|+|||++.+ +.++|+|||||++|+|++|..||
T Consensus 161 k~i~~~~~~~~~l~---------~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 161 IFKKLEEEDLLDID---------VDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred eecccccccccccc---------cccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 76532111000000 0000000111122334679999999999874 45899999999999999999999
Q ss_pred hh
Q 002580 899 PI 900 (905)
Q Consensus 899 ~~ 900 (905)
..
T Consensus 232 ~~ 233 (932)
T PRK13184 232 RR 233 (932)
T ss_pred CC
Confidence 53
No 105
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=3.2e-31 Score=288.22 Aligned_cols=193 Identities=29% Similarity=0.456 Sum_probs=165.8
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||+|+||.||++.+..+|+.||+|.+.............+..|+++++.++||||+++++++..+...|+||||++|++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999999999999999998764333333344556799999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 002580 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (905)
Q Consensus 760 ~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~ 839 (905)
..++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-----------
Confidence 988876555568999999999999999999999999999999999999999999999999986532110
Q ss_pred ccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......||+.|+|||++.+ +.++|+|||||++|+|++|..||..
T Consensus 150 -----------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 150 -----------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred -----------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 1123468999999999874 4589999999999999999999964
No 106
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=2.3e-32 Score=294.95 Aligned_cols=195 Identities=29% Similarity=0.396 Sum_probs=170.1
Q ss_pred cccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
.+.||+|.||+||-+.++.+|+.||||++.+..+.... ...+.+|+.||+.+.||.||.+...|++.+.+|+|||.+ .
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~ 646 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-H 646 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-c
Confidence 36899999999999999999999999999987554443 378899999999999999999999999999999999999 4
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC---CcEEEEeccCccccCCCCCCCCC
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~---~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
|+..+++-....+++++.....++.||+.||.|||-++|+|+||||+|||+.+. -++||||||++++++..+
T Consensus 647 GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----- 721 (888)
T KOG4236|consen 647 GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----- 721 (888)
T ss_pred chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhh-----
Confidence 565555555556789999999999999999999999999999999999999653 379999999999876322
Q ss_pred cchhhhccccCCCCcccccccccccccccCCcccccccccc--CCC-CchHHHHHHHHHHHHhCCCCchhh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--AYT-RMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--~~~-~sDiwSlGvil~elltg~~PF~~~ 901 (905)
...+.+|||.|+|||++. ||. .-|+||.|+|+|.-+.|.+||...
T Consensus 722 -----------------------FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd 769 (888)
T KOG4236|consen 722 -----------------------FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED 769 (888)
T ss_pred -----------------------hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc
Confidence 234679999999999998 554 669999999999999999999653
No 107
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=5.2e-31 Score=287.76 Aligned_cols=200 Identities=30% Similarity=0.475 Sum_probs=173.2
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|++.+.||+|+||.||++.+..+++.||+|.+.+...........+..|+.+++.++|+||+.+++.+.+.+..|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 37788899999999999999999999999999876544444444567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|++|++|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~---- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ---- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----
Confidence 9999999999876555568999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......||+.|+|||++.+ +.++|+|||||++|+|++|+.||..
T Consensus 157 ------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~ 203 (285)
T cd05630 157 ------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 203 (285)
T ss_pred ------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 1123468999999999974 4589999999999999999999964
No 108
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=6.8e-31 Score=286.83 Aligned_cols=200 Identities=30% Similarity=0.463 Sum_probs=173.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|+..+.||.|+||.||++.+..+++.||+|.+.+...........+.+|+.+++.++|+||+.+++++..++..|++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 37788899999999999999999999999999976544334444567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|..++.......+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~---- 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE---- 156 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC----
Confidence 9999999988876555569999999999999999999999999999999999999999999999999985432110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......|++.|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 157 ------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~ 203 (285)
T cd05632 157 ------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRG 203 (285)
T ss_pred ------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 1123468999999999874 4589999999999999999999963
No 109
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=6.1e-31 Score=307.78 Aligned_cols=202 Identities=21% Similarity=0.284 Sum_probs=172.2
Q ss_pred CCCeeecccccccCceEEEEEEEcCC-CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t-~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
...|.+.+.||+|+||.||+|....+ +..+|+|.+... .......+..|+.+++.++||||++++++|...+.+||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~l 142 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLL 142 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEE
Confidence 34599999999999999999998877 788999976533 34445667889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 750 ITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
||||++|++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 143 v~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~ 222 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDS 222 (478)
T ss_pred EEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCc
Confidence 99999999999888642 2346899999999999999999999999999999999999999999999999999754311
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. .......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 223 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~ 273 (478)
T PTZ00267 223 VS-------------------------LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKG 273 (478)
T ss_pred cc-------------------------cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 10 012335679999999999874 4589999999999999999999953
No 110
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-32 Score=304.61 Aligned_cols=199 Identities=30% Similarity=0.385 Sum_probs=170.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC------e
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT------H 746 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------~ 746 (905)
.|..-+.||+|+||.||+++++.||+.||||.+++.. .....+...+|+++|++++|+|||+++++=.+.. .
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~ 91 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRL 91 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCccccc
Confidence 4666788999999999999999999999999998753 3445677889999999999999999998765433 4
Q ss_pred EEEEEeccCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEc--CCC--cEEEEeccCc
Q 002580 747 VCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNG--HVSLTDFDLS 821 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~--~~~--~vkL~DFG~s 821 (905)
..+|||||.||+|..++.+- ....+++.+++.++.++..||.|||.+|||||||||.||++- .+| ..||+|||.|
T Consensus 92 ~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 92 PVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred ceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 68999999999999999863 234699999999999999999999999999999999999984 334 4799999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~P 897 (905)
+-+...+ ...+++||+.|++||++.. ....|.|||||++|+..||..|
T Consensus 172 rel~d~s----------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lP 223 (732)
T KOG4250|consen 172 RELDDNS----------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELP 223 (732)
T ss_pred ccCCCCC----------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCC
Confidence 8755222 3467899999999999983 2378999999999999999999
Q ss_pred chhh
Q 002580 898 FPIL 901 (905)
Q Consensus 898 F~~~ 901 (905)
|...
T Consensus 224 F~p~ 227 (732)
T KOG4250|consen 224 FIPF 227 (732)
T ss_pred CCcC
Confidence 9654
No 111
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=7.4e-31 Score=293.20 Aligned_cols=199 Identities=24% Similarity=0.388 Sum_probs=173.9
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++.+.||.|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++|+||++++++|.+++.+|
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 79 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 79 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence 45678999999999999999999999999999999987542 3344567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
+||||+++++|.+++... ..+++..+..++.|++.||.|||++ +|+|+||||+|||++.++.+||+|||++......
T Consensus 80 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 80 ICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999999999764 3488999999999999999999985 7999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 158 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 -----------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred -----------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1123468999999999974 4589999999999999999999964
No 112
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1.1e-31 Score=299.47 Aligned_cols=192 Identities=38% Similarity=0.621 Sum_probs=163.1
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
||+|+||.||+|.+..+++.||+|++.+..............|..++..+ +||||+.++++|...+.+|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 79999999999999999999999999765433334445556677777665 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~--------- 149 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD--------- 149 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC---------
Confidence 9999998764 45899999999999999999999999999999999999999999999999998542211
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 150 ------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 150 ------------------NKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred ------------------CCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 011234679999999999863 4589999999999999999999853
No 113
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=4e-33 Score=282.86 Aligned_cols=196 Identities=24% Similarity=0.379 Sum_probs=177.3
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
-|.++.+||+|+||.||++.++.+|+.+|||.++.. .+.+.+..|+.++++++.++||++|+.|.....+|||||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 378899999999999999999999999999988754 467889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
||..|+..++++.+ .+++++.++..+++..+.||.|||...-+|||||..|||++.+|.+||+|||.+-.+.
T Consensus 109 YCGAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT------- 180 (502)
T KOG0574|consen 109 YCGAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT------- 180 (502)
T ss_pred hcCCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhh-------
Confidence 99999999998754 5679999999999999999999999999999999999999999999999999985432
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCcccccccccc--C-CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--A-YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--~-~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.......+..|||.|||||++. | .+++||||||++..||.-|++||..+
T Consensus 181 --------------------DTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 181 --------------------DTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDI 232 (502)
T ss_pred --------------------hhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccc
Confidence 2334456789999999999998 4 56999999999999999999999754
No 114
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-32 Score=298.78 Aligned_cols=193 Identities=26% Similarity=0.369 Sum_probs=174.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
-|.-++.||.|+||.||-+++..+.+.||||.+.-.........+.+..|+..|.+++|||++.+-++|......|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 47788999999999999999999999999999987655566677889999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|| -|+-.+++.-. .+++.+..+..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.+.+..
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~------- 177 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA------- 177 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-------
Confidence 99 67777877765 3569999999999999999999999999999999999999999999999999986533
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHHhCCCCc
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~elltg~~PF 898 (905)
...+|+|||.|||||++.. ..+.||||||+++.+|.-.++|+
T Consensus 178 ------------------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPl 225 (948)
T KOG0577|consen 178 ------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 225 (948)
T ss_pred ------------------------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCc
Confidence 2357899999999999982 45999999999999999999995
No 115
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-32 Score=269.65 Aligned_cols=214 Identities=21% Similarity=0.228 Sum_probs=177.9
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC---
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--- 744 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--- 744 (905)
.++.++|++.+.||+|||+.||+++...++..||+|.+... ...+.+..++|++..++++||||++++++...+
T Consensus 17 ~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~---~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D 93 (302)
T KOG2345|consen 17 IINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH---SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD 93 (302)
T ss_pred EEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc---chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc
Confidence 46778999999999999999999999999999999998755 356778899999999999999999998876533
Q ss_pred --CeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeCCCCCCCEEEcCCCcEEEEec
Q 002580 745 --THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 745 --~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~g--IvHrDLKp~NILl~~~~~vkL~DF 818 (905)
...||+++|+..|+|.+.+... .+..+++.+++.|+.+|++||++||+.. +.||||||.|||+++++.++|.||
T Consensus 94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~ 173 (302)
T KOG2345|consen 94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDL 173 (302)
T ss_pred CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEec
Confidence 3599999999999999998753 3346999999999999999999999998 999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHH
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKF 892 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~ell 892 (905)
|.++....--.. . ..+........-.+|..|.|||.+.. +.++|||||||+||.|+
T Consensus 174 GS~~~a~i~i~~---~---------------~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~m 235 (302)
T KOG2345|consen 174 GSATQAPIQIEG---S---------------RQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMM 235 (302)
T ss_pred cCccccceEeec---h---------------HHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHH
Confidence 998653311000 0 00011112223467899999999982 46999999999999999
Q ss_pred hCCCCchhhh
Q 002580 893 MEFQPFPILC 902 (905)
Q Consensus 893 tg~~PF~~~~ 902 (905)
+|..||+...
T Consensus 236 f~~sPfe~~~ 245 (302)
T KOG2345|consen 236 FGESPFERIY 245 (302)
T ss_pred HcCCcchHHh
Confidence 9999998764
No 116
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=5.9e-31 Score=287.64 Aligned_cols=199 Identities=24% Similarity=0.348 Sum_probs=163.9
Q ss_pred CCeeecccccccCceEEEEEEEcC-CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC---CCCCcceEEEEEE-----
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ----- 742 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~-t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~----- 742 (905)
++|++.+.||+|+||.||+|.+.. ++..||+|.+...... ......+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGE-EGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCC-CCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 479999999999999999999854 4788999998754322 22233455677777665 6999999999885
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcc
Q 002580 743 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (905)
Q Consensus 743 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~ 822 (905)
....+++||||+. ++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 2456999999995 699999987655668999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
..... .......||+.|+|||++.+ ..++|+|||||++|+|++|.+||.
T Consensus 159 ~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 210 (290)
T cd07862 159 IYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFR 210 (290)
T ss_pred eccCC----------------------------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcC
Confidence 53211 11234578999999999874 458999999999999999999996
Q ss_pred h
Q 002580 900 I 900 (905)
Q Consensus 900 ~ 900 (905)
.
T Consensus 211 ~ 211 (290)
T cd07862 211 G 211 (290)
T ss_pred C
Confidence 3
No 117
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.5e-32 Score=278.66 Aligned_cols=208 Identities=32% Similarity=0.581 Sum_probs=188.7
Q ss_pred ccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 002580 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 743 (905)
Q Consensus 665 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~ 743 (905)
..+.+..++|.++.+||+|+|++|.+++.++|.+.||+|++++....+..+....+.|..++.+. +||++|-++.+|+.
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqt 322 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQT 322 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcc
Confidence 44557788999999999999999999999999999999999999888888888889999998876 79999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
...+++|.||++||+|.-.++++++ ++++.++.+...|+.||.|||++||++||||.+|+|++..|.+||+|+|+++.
T Consensus 323 esrlffvieyv~ggdlmfhmqrqrk--lpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhhc--CcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhc
Confidence 9999999999999999988887654 99999999999999999999999999999999999999999999999999954
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccCC---CCchHHHHHHHHHHHHhCCCCchh
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY---TRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~---~~sDiwSlGvil~elltg~~PF~~ 900 (905)
-- .+...++++||||.|+|||++.+. ...|.|+||++|+||+.|+.||..
T Consensus 401 ~l---------------------------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 401 GL---------------------------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CC---------------------------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 21 234456789999999999999963 378999999999999999999976
Q ss_pred h
Q 002580 901 L 901 (905)
Q Consensus 901 ~ 901 (905)
.
T Consensus 454 v 454 (593)
T KOG0695|consen 454 V 454 (593)
T ss_pred e
Confidence 4
No 118
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=7.7e-31 Score=296.22 Aligned_cols=195 Identities=22% Similarity=0.354 Sum_probs=165.8
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 745 (905)
.++|++.+.||+|+||.||+|.+..++..||+|.+.... ........+.+|+.+++.++||||++++++|....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF-QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc-cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 578999999999999999999999999999999987542 23344567789999999999999999999986543
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 746 -~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
.+|+||||+. ++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 5799999995 567666643 3788999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
... .......||+.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 174 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~ 223 (359)
T cd07876 174 CTN----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ 223 (359)
T ss_pred ccC----------------------------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 210 01223578999999999974 458999999999999999999995
No 119
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=2e-31 Score=295.89 Aligned_cols=193 Identities=39% Similarity=0.623 Sum_probs=165.4
Q ss_pred ccccccCceEEEEEEE---cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 002580 678 KPLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 754 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~---~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 754 (905)
+.||+|+||.||++.+ ..+|+.||+|++.+... .......+..|+.++++++||||+++++++.+.+.+|+||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL-KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh-hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999986 35789999999986432 2223456678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCc
Q 002580 755 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (905)
Q Consensus 755 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~ 834 (905)
++++|.+++.+. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~------- 151 (318)
T cd05582 81 RGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH------- 151 (318)
T ss_pred CCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-------
Confidence 999999998764 35899999999999999999999999999999999999999999999999998643211
Q ss_pred chhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+||+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 152 --------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 200 (318)
T cd05582 152 --------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQG 200 (318)
T ss_pred --------------------CCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCC
Confidence 011234579999999999874 4589999999999999999999964
No 120
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=7.8e-32 Score=274.50 Aligned_cols=194 Identities=23% Similarity=0.318 Sum_probs=165.2
Q ss_pred CCCeeec-ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe----C
Q 002580 671 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----K 744 (905)
Q Consensus 671 ~~~y~i~-~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~ 744 (905)
.++|.+- ++||-|-.|.|..|.++.|++.||+|++.-. ....+|+++--.. .|||||.++++|.. .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4566653 6799999999999999999999999987532 4556777764444 79999999998863 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC---CCcEEEEeccCc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 821 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~---~~~vkL~DFG~s 821 (905)
.++.+|||+|+||.|+..+..++...|++.++..|++||+.|+.|||+.+|.||||||+|+|... |..+||+|||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred eeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence 67899999999999999999988889999999999999999999999999999999999999964 457999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
+...... ...+-|.||.|.|||++.. ....|+||+||+||-|++|.+||
T Consensus 212 K~t~~~~----------------------------~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPF 263 (400)
T KOG0604|consen 212 KETQEPG----------------------------DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_pred cccCCCc----------------------------cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcc
Confidence 7643211 2345588999999999983 45789999999999999999999
Q ss_pred hh
Q 002580 899 PI 900 (905)
Q Consensus 899 ~~ 900 (905)
+-
T Consensus 264 YS 265 (400)
T KOG0604|consen 264 YS 265 (400)
T ss_pred cc
Confidence 74
No 121
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.2e-30 Score=305.59 Aligned_cols=205 Identities=26% Similarity=0.359 Sum_probs=173.8
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC---
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--- 745 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--- 745 (905)
...++|.+.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++..++|+||++++..+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~-~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM-SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 345799999999999999999999999999999999976533 4455667889999999999999999988775432
Q ss_pred -----eEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEec
Q 002580 746 -----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 746 -----~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DF 818 (905)
.+++||||+++|+|.+++... ....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DF 187 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDF 187 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEec
Confidence 378999999999999998753 2346899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCC
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEF 895 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~ 895 (905)
|+++....... .......+||+.|+|||++.+ +.++|+|||||++|+|++|+
T Consensus 188 Gls~~~~~~~~-------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~ 242 (496)
T PTZ00283 188 GFSKMYAATVS-------------------------DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLK 242 (496)
T ss_pred ccCeecccccc-------------------------ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 99865431110 011234679999999999984 45899999999999999999
Q ss_pred CCch
Q 002580 896 QPFP 899 (905)
Q Consensus 896 ~PF~ 899 (905)
.||.
T Consensus 243 ~Pf~ 246 (496)
T PTZ00283 243 RPFD 246 (496)
T ss_pred CCCC
Confidence 9995
No 122
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-32 Score=299.27 Aligned_cols=197 Identities=26% Similarity=0.408 Sum_probs=175.1
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
+.|.|+..||.|+||.||++.++.++-..|.|++... .....+.+..||+||..|+||+|+++++.|...+.++|+.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk---seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK---SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc---chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 4688999999999999999999999999999998744 5677889999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||.||-...++-.. ...+++.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.+.....
T Consensus 109 EFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~----- 182 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS----- 182 (1187)
T ss_pred eecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-----
Confidence 999999888877654 35699999999999999999999999999999999999999999999999999865321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+|+|||+|||||+..+ ..++||||||++|.+|..+.+|--
T Consensus 183 ----------------------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHh 236 (1187)
T KOG0579|consen 183 ----------------------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHH 236 (1187)
T ss_pred ----------------------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcc
Confidence 1123457899999999999984 349999999999999999999964
No 123
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=3.5e-30 Score=285.36 Aligned_cols=228 Identities=52% Similarity=0.853 Sum_probs=181.2
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|++|.||+|.+..++..||+|.+.+...........+..|+++++.++|+||+++++++......|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 37999999999999999999999999999999998765444456677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+.+++|.+++.......+++..+..++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999987655679999999999999999999999999999999999999999999999999987654222111
Q ss_pred CCcchhhhccc--cCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRH--KGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
........... ..................+.||..|+|||++.+ ..++|+||||+++|+|++|..||.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 00000000000 000000000111122345689999999999874 458999999999999999999995
No 124
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=1.5e-30 Score=301.15 Aligned_cols=195 Identities=20% Similarity=0.280 Sum_probs=161.0
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 744 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~----- 744 (905)
...+|.+.+.||+|+||.||+|.+..+++.||||.+.... ....+|+.+++.++||||++++++|...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~ 136 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKN 136 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-------chHHHHHHHHHhcCCCCCcceeeeEeecccccC
Confidence 3468999999999999999999999999999999885431 2235699999999999999999887532
Q ss_pred ---CeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC-cEEEEec
Q 002580 745 ---THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDF 818 (905)
Q Consensus 745 ---~~~~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~-~vkL~DF 818 (905)
..+++||||++ ++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+||
T Consensus 137 ~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 137 EKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred CCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 25789999996 577776653 2235689999999999999999999999999999999999998665 7999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhC
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFME 894 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg 894 (905)
|+|+..... ......+||+.|+|||++.+ ..++|+|||||+||+|++|
T Consensus 216 Gla~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG 267 (440)
T PTZ00036 216 GSAKNLLAG----------------------------QRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILG 267 (440)
T ss_pred ccchhccCC----------------------------CCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 999654211 11224578999999999864 3489999999999999999
Q ss_pred CCCchh
Q 002580 895 FQPFPI 900 (905)
Q Consensus 895 ~~PF~~ 900 (905)
.+||..
T Consensus 268 ~~pf~~ 273 (440)
T PTZ00036 268 YPIFSG 273 (440)
T ss_pred CCCCCC
Confidence 999953
No 125
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=1.2e-30 Score=296.01 Aligned_cols=197 Identities=23% Similarity=0.333 Sum_probs=167.5
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~ 747 (905)
+|++.+.||+|+||.||++.+..+++.||+|.+... .........+.+|+.+++.++|+||+++++++...+ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNV-FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccc-ccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478899999999999999999999999999998654 223344567889999999999999999999998776 79
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||+. ++|..++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~ 156 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD 156 (372)
T ss_pred EEEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence 99999995 6888887653 45899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. .......+|+.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 157 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 206 (372)
T cd07853 157 ES--------------------------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQ 206 (372)
T ss_pred cc--------------------------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCC
Confidence 10 11223468899999999874 347999999999999999999995
No 126
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.97 E-value=2.5e-30 Score=284.94 Aligned_cols=205 Identities=22% Similarity=0.299 Sum_probs=167.3
Q ss_pred ccCCCeeecccccccCceEEEEEEEcC----------------CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP 732 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~----------------t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~ 732 (905)
+..++|.+.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.++..++||
T Consensus 2 ~~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~ 79 (304)
T cd05096 2 FPRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDP 79 (304)
T ss_pred CchhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCC
Confidence 345789999999999999999998632 34579999987542 344556788999999999999
Q ss_pred CcceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 002580 733 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------------TKVLKEDAVRFYAAEVVVALEYLHCQGI 795 (905)
Q Consensus 733 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~-----------------~~~l~~~~~~~i~~qil~gL~~LH~~gI 795 (905)
||+++++++.+.+..|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||
T Consensus 80 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i 159 (304)
T cd05096 80 NIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF 159 (304)
T ss_pred CeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence 99999999999999999999999999999986531 1236778889999999999999999999
Q ss_pred eeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC
Q 002580 796 IYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA 875 (905)
Q Consensus 796 vHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~ 875 (905)
+||||||+|||++.++.+||+|||++........ ........++..|+|||++.+
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~ 214 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-------------------------YRIQGRAVLPIRWMAWECILM 214 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCce-------------------------eEecCcCCCCccccCHHHHhc
Confidence 9999999999999999999999999865321100 011123356789999999873
Q ss_pred ---CCCchHHHHHHHHHHHHh--CCCCchh
Q 002580 876 ---YTRMTRYNYLILVSKKFM--EFQPFPI 900 (905)
Q Consensus 876 ---~~~sDiwSlGvil~ellt--g~~PF~~ 900 (905)
..++|+|||||++|+|++ +..||..
T Consensus 215 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 244 (304)
T cd05096 215 GKFTTASDVWAFGVTLWEILMLCKEQPYGE 244 (304)
T ss_pred CCCCchhhhHHHHHHHHHHHHccCCCCCCc
Confidence 569999999999999986 5677753
No 127
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=2.1e-30 Score=286.34 Aligned_cols=200 Identities=21% Similarity=0.278 Sum_probs=169.1
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
..++|.+.+.||+|+||.||+|.+..++..+|+|.++.... ......+.+|+.+++.++||||+++++++..++..|+
T Consensus 4 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 81 (309)
T cd07872 4 KMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTL 81 (309)
T ss_pred CCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--CCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEE
Confidence 35789999999999999999999999999999999875422 2223456789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||||++ ++|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 82 v~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 82 VFEYLD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred EEeCCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 999996 58888876543 358899999999999999999999999999999999999999999999999985432111
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+|+.|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 159 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~ 207 (309)
T cd07872 159 --------------------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPG 207 (309)
T ss_pred --------------------------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01123467899999999863 4589999999999999999999953
No 128
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.97 E-value=2.3e-30 Score=312.48 Aligned_cols=203 Identities=22% Similarity=0.347 Sum_probs=170.8
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CC
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KT 745 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~ 745 (905)
....++|.+++.||.|+||.||+|.+..++..+|+|++..... .......+..|+.+++.|+||||++++++|.+ ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l-~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~ 87 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL-KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ 87 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC
Confidence 3456799999999999999999999999999999999876532 34456778899999999999999999998864 45
Q ss_pred eEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeeCCCCCCCEEEcC-------
Q 002580 746 HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-------GIIYRDLKPENVLLQG------- 809 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~-------gIvHrDLKp~NILl~~------- 809 (905)
.+|||||||++++|.+++... ....+++..++.|+.||+.||.|||+. +||||||||+||||+.
T Consensus 88 ~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~ 167 (1021)
T PTZ00266 88 KLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGK 167 (1021)
T ss_pred EEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccc
Confidence 799999999999999998753 224599999999999999999999985 4999999999999964
Q ss_pred ----------CCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----
Q 002580 810 ----------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---- 875 (905)
Q Consensus 810 ----------~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---- 875 (905)
.+.+||+|||++...... ......+||+.|+|||++.+
T Consensus 168 i~~~~~n~ng~~iVKLsDFGlAr~l~~~----------------------------s~~~s~vGTp~YmAPEvL~ge~~~ 219 (1021)
T PTZ00266 168 ITAQANNLNGRPIAKIGDFGLSKNIGIE----------------------------SMAHSCVGTPYYWSPELLLHETKS 219 (1021)
T ss_pred ccccccccCCCCceEEccCCcccccccc----------------------------ccccccCCCccccCHHHHhccCCC
Confidence 235899999998653211 01224579999999999853
Q ss_pred -CCCchHHHHHHHHHHHHhCCCCch
Q 002580 876 -YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 876 -~~~sDiwSlGvil~elltg~~PF~ 899 (905)
..++|||||||+||+|++|..||.
T Consensus 220 ~s~KSDVWSLG~ILYELLTGk~PF~ 244 (1021)
T PTZ00266 220 YDDKSDMWALGCIIYELCSGKTPFH 244 (1021)
T ss_pred CCchhHHHHHHHHHHHHHHCCCCCC
Confidence 358999999999999999999995
No 129
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=1.9e-30 Score=293.60 Aligned_cols=195 Identities=21% Similarity=0.357 Sum_probs=166.2
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
.++|.+.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc-cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 578999999999999999999999999999999987642 2334456778899999999999999999987643
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+|+||||+. ++|..++.. .++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 35799999995 577777753 2788999999999999999999999999999999999999999999999999653
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
... .......+|+.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 177 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 226 (364)
T cd07875 177 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFP 226 (364)
T ss_pred CCC----------------------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCC
Confidence 211 01234578999999999975 458999999999999999999995
No 130
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=3.8e-30 Score=281.53 Aligned_cols=197 Identities=39% Similarity=0.687 Sum_probs=174.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||++.+..+++.||+|++.+...........+.+|++++++++||||+++++++...+.+|+||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47999999999999999999999999999999997654444455677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~---- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR---- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----
Confidence 999999999999775 45899999999999999999999999999999999999999999999999998653211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
....++++.|+|||.+.+ ..++|+||||+++|+|++|..||..
T Consensus 155 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 200 (290)
T cd05580 155 --------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFD 200 (290)
T ss_pred --------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 123468899999999874 4589999999999999999999953
No 131
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.97 E-value=1.6e-30 Score=294.89 Aligned_cols=206 Identities=23% Similarity=0.332 Sum_probs=169.4
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCC-----eEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 741 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~-----~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~ 741 (905)
.+..++|.+.+.||+|+||.||+|.+..++ ..||+|.++... .......+.+|+.+++.+ +|+||++++++|
T Consensus 34 ~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~ 111 (374)
T cd05106 34 EFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA--HTDEREALMSELKILSHLGQHKNIVNLLGAC 111 (374)
T ss_pred cccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC--CHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence 355678999999999999999999865443 579999997542 233456788999999999 899999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002580 742 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 767 (905)
Q Consensus 742 ~~~~~~~lV~E~~~gg~L~~~l~~~~------------------------------------------------------ 767 (905)
...+.+|+|||||++|+|.+++....
T Consensus 112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 99999999999999999999986421
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 768 --------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 768 --------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
..++++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~---- 267 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN---- 267 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc----
Confidence 12477888999999999999999999999999999999999999999999999865321110
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
........+++.|+|||++.. +.++|+|||||++|+|++ |..||+.
T Consensus 268 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~ 317 (374)
T cd05106 268 ---------------------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPG 317 (374)
T ss_pred ---------------------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 001112335678999999873 569999999999999997 9999964
No 132
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.3e-31 Score=287.18 Aligned_cols=204 Identities=21% Similarity=0.319 Sum_probs=169.9
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 747 (905)
++...|+++++||+||.+.||++...+. +.||+|.+... ..+......+.+|+..|.+| .|.+|+++|+|-..++++
T Consensus 358 Vkg~~Yeilk~iG~GGSSkV~kV~~s~~-~iyalkkv~~~-~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~l 435 (677)
T KOG0596|consen 358 VKGREYEILKQIGSGGSSKVFKVLNSDK-QIYALKKVVLL-EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYL 435 (677)
T ss_pred ECcchhhHHHhhcCCCcceeeeeecCCC-cchhhhHHHHh-hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceE
Confidence 4567899999999999999999998544 45666655433 34566788899999999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
||||||= ..+|..+|.+... .++...++.+..|++.+++++|.+||||.||||.|+|+- .|.+||+|||+|..+..+
T Consensus 436 YmvmE~G-d~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 436 YMVMECG-DIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD 512 (677)
T ss_pred EEEeecc-cccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcc
Confidence 9999976 6799999987533 345458889999999999999999999999999999987 689999999999776533
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------------CCCchHHHHHHHHHHHHh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------------YTRMTRYNYLILVSKKFM 893 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------------~~~sDiwSlGvil~ellt 893 (905)
...+ ...+.+||+.||+||.+.. ..++||||||||||+|++
T Consensus 513 TTsI-------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY 567 (677)
T KOG0596|consen 513 TTSI-------------------------VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY 567 (677)
T ss_pred ccce-------------------------eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence 2221 2345689999999999972 248999999999999999
Q ss_pred CCCCchhhh
Q 002580 894 EFQPFPILC 902 (905)
Q Consensus 894 g~~PF~~~~ 902 (905)
|+.||....
T Consensus 568 gktPf~~~~ 576 (677)
T KOG0596|consen 568 GKTPFGQII 576 (677)
T ss_pred cCCchHHHH
Confidence 999997653
No 133
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=2e-30 Score=292.33 Aligned_cols=196 Identities=21% Similarity=0.361 Sum_probs=166.4
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK----- 744 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~----- 744 (905)
..++|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++||||++++++|...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc-cChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3579999999999999999999999999999999987542 2334456778899999999999999999988643
Q ss_pred -CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 745 -THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 745 -~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
...|+||||++ ++|...+.. .++...+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~ 168 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART 168 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence 35799999995 567776643 388899999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.... .......||+.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 169 ~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 219 (355)
T cd07874 169 AGTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 219 (355)
T ss_pred CCCc----------------------------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 3211 01234578999999999874 458999999999999999999995
No 134
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=2.3e-30 Score=282.55 Aligned_cols=197 Identities=27% Similarity=0.393 Sum_probs=162.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC---CCCCcceEEEEEEe-----C
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQT-----K 744 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~-----~ 744 (905)
+|++.+.||+|+||.||+|.+..+++.||+|.++..... ......+.+|+.+++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNE-DGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCC-CCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 589999999999999999999999999999998754221 11223345666666654 79999999998864 3
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..++++|||+. ++|..++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 46899999996 58988887655556899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.... ......||+.|+|||++.+ ..++|+|||||++|+|++|.+||.
T Consensus 159 ~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~ 208 (288)
T cd07863 159 SCQM----------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFC 208 (288)
T ss_pred cCcc----------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcC
Confidence 3110 1123468999999999874 468999999999999999999984
No 135
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=1.5e-30 Score=291.91 Aligned_cols=194 Identities=25% Similarity=0.377 Sum_probs=166.3
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
.++|.+++.||.|+||.||+|.+..++..||+|.+.... ........+.+|+.+++.++|+||++++++|...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF-QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh-hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 468999999999999999999999999999999987542 2223445677899999999999999999987543
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...|++++++ +++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceec
Confidence 4579999998 8899888754 34899999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. .....+||+.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 169 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 217 (343)
T cd07878 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFP 217 (343)
T ss_pred CC------------------------------CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCC
Confidence 21 1124578999999999864 358999999999999999999995
No 136
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.97 E-value=3.8e-30 Score=292.15 Aligned_cols=206 Identities=21% Similarity=0.297 Sum_probs=169.4
Q ss_pred cccCCCeeecccccccCceEEEEEEE-----cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 741 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~ 741 (905)
.+..++|++.+.||+|+||.||+|.+ ..++..||+|+++... .......+.+|+.++..+ +||||++++++|
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~ 108 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGAC 108 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeee
Confidence 35566899999999999999999974 3457789999987542 233456788999999999 899999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002580 742 QTKTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 767 (905)
Q Consensus 742 ~~~~~~~lV~E~~~gg~L~~~l~~~~------------------------------------------------------ 767 (905)
...+..|+|||||++|+|.+++....
T Consensus 109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 99999999999999999999986532
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 768 -------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 768 -------------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 1246788899999999999999999999999999999999999999999999986543211
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.. .......++..|+|||++.+ ..++|+|||||++|+|++ |..||..
T Consensus 269 ~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~ 319 (375)
T cd05104 269 NY-------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPG 319 (375)
T ss_pred cc-------------------------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCC
Confidence 10 01112345678999999874 459999999999999997 8999864
No 137
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=9e-30 Score=272.48 Aligned_cols=200 Identities=27% Similarity=0.411 Sum_probs=174.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|.+.+.||+|++|.||+|.+..++..|++|.+..... .......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM-NRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC-CHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 48888999999999999999999999999999875432 34456778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---- 155 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---- 155 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc----
Confidence 9999999999987655679999999999999999999999999999999999999999999999999986543111
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......|++.|+|||++.. ..++|+|||||++|+|++|+.||..
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 203 (256)
T cd08529 156 -----------------------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDA 203 (256)
T ss_pred -----------------------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 11223468899999999874 4589999999999999999999953
No 138
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.97 E-value=6.8e-30 Score=275.90 Aligned_cols=203 Identities=15% Similarity=0.171 Sum_probs=168.7
Q ss_pred ccCCCeeecccccccCceEEEEEEEc---CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~---~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
+...+|++.+.||+|+||.||++.+. ..+..||+|.++... .......+.+|+.++..++||||+++++++..++
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 79 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC--SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN 79 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC
Confidence 44568999999999999999999864 346789999987542 3344567889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
..|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++|++||||||+|||++.++.++|+|||.+....
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999999997643 358999999999999999999999999999999999999999999999999874421
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
... ........++..|+|||.+.+ +.++|+|||||++|++++ |..||..
T Consensus 159 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 159 SEA--------------------------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred ccc--------------------------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 100 001112345678999999874 458999999999999775 9999953
No 139
>PHA02988 hypothetical protein; Provisional
Probab=99.97 E-value=6e-30 Score=279.17 Aligned_cols=190 Identities=17% Similarity=0.134 Sum_probs=163.3
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeEEEEEec
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHVCLITDY 753 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~~lV~E~ 753 (905)
..||+|+++.||+|.. +|+.||+|.+.+...........+.+|+.+|.+++||||+++++++.+ ...+++||||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 4689999999999998 789999999986544344445778899999999999999999999876 4578999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
+++|+|.+++... ..+++.....++.|++.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 104 ~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----- 176 (283)
T PHA02988 104 CTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----- 176 (283)
T ss_pred CCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc-----
Confidence 9999999999764 3588899999999999999999985 9999999999999999999999999998653211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.....||+.|+|||++.+ +.++|+|||||++|+|++|..||...
T Consensus 177 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~ 225 (283)
T PHA02988 177 -------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENL 225 (283)
T ss_pred -------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCC
Confidence 112468899999999863 45999999999999999999999743
No 140
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=5.9e-30 Score=276.16 Aligned_cols=197 Identities=24% Similarity=0.376 Sum_probs=171.1
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.+.+.||+|+||.||+|.+..+++.||+|.++.. .......+.+|+.+++.++||||+++++++...+.+|++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE---PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 45899999999999999999999999999999998754 223445677899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06645 85 MEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT--- 159 (267)
T ss_pred EeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc---
Confidence 9999999999998764 35899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCcccccccccc------CCCCchHHHHHHHHHHHHhCCCCch
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF------AYTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~------~~~~sDiwSlGvil~elltg~~PF~ 899 (905)
........|++.|+|||++. ...++|+|||||++|+|++|..||.
T Consensus 160 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~ 210 (267)
T cd06645 160 ------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMF 210 (267)
T ss_pred ------------------------ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcc
Confidence 01123457899999999874 2358999999999999999999984
No 141
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=9.4e-30 Score=272.60 Aligned_cols=199 Identities=24% Similarity=0.424 Sum_probs=173.5
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||.|+||.||++.+..++..||+|.+.... .....+.+..|+.+++.++|+||+++++++.+++.+|++||
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 5889999999999999999999999999999986532 23455678889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~----- 153 (255)
T cd08219 79 YCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP----- 153 (255)
T ss_pred eCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccc-----
Confidence 999999999987655566899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........|++.|+|||++.+ ..++|+||||+++|+|++|..||..
T Consensus 154 ----------------------~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~ 202 (255)
T cd08219 154 ----------------------GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQA 202 (255)
T ss_pred ----------------------ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCC
Confidence 011224568899999999874 4589999999999999999999963
No 142
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.97 E-value=9.8e-30 Score=290.18 Aligned_cols=207 Identities=23% Similarity=0.275 Sum_probs=170.7
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCC-----CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEE
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 740 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~ 740 (905)
..+..++|.+++.||+|+||.||+|.+... +..||+|.+.... .....+.+.+|+.+++.+. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~ 109 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGA 109 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEE
Confidence 345678999999999999999999987433 3479999987542 3344567889999999996 9999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCC-----------------------------------------------------
Q 002580 741 FQTKTHVCLITDYCPGGELFLLLDRQP----------------------------------------------------- 767 (905)
Q Consensus 741 ~~~~~~~~lV~E~~~gg~L~~~l~~~~----------------------------------------------------- 767 (905)
|...+.+|||||||++|+|.+++..+.
T Consensus 110 ~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 110 CTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred EccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 999999999999999999999886531
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEE
Q 002580 768 -----------------------------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 806 (905)
Q Consensus 768 -----------------------------------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NIL 806 (905)
...+++..+..++.||+.||.|||+++|+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 124777888999999999999999999999999999999
Q ss_pred EcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHH
Q 002580 807 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYN 883 (905)
Q Consensus 807 l~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwS 883 (905)
++.++.+||+|||++........ ........+++.|+|||.+.+ ..++|+||
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwS 324 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSN-------------------------YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWS 324 (400)
T ss_pred EeCCCEEEEEeCCcceecccccc-------------------------ccccCCcCCCcceEChhhhcCCCCCchhhHHH
Confidence 99999999999999865431111 011223457789999999874 45899999
Q ss_pred HHHHHHHHHh-CCCCchh
Q 002580 884 YLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 884 lGvil~ellt-g~~PF~~ 900 (905)
|||++|+|++ |..||..
T Consensus 325 lGvil~ellt~g~~P~~~ 342 (400)
T cd05105 325 YGILLWEIFSLGGTPYPG 342 (400)
T ss_pred HHHHHHHHHHCCCCCCcc
Confidence 9999999996 9999864
No 143
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=1.5e-29 Score=275.33 Aligned_cols=192 Identities=26% Similarity=0.378 Sum_probs=167.2
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICT 78 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEE
Confidence 36888999999999999999999999999999987542 2334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|..+. .+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---- 148 (279)
T cd06619 79 EFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---- 148 (279)
T ss_pred ecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc----
Confidence 999999986542 3788899999999999999999999999999999999999999999999998543210
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+||+.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 149 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 195 (279)
T cd06619 149 -------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQ 195 (279)
T ss_pred -------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchh
Confidence 1224578999999999874 4589999999999999999999964
No 144
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=1.1e-29 Score=273.94 Aligned_cols=198 Identities=23% Similarity=0.341 Sum_probs=170.8
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|++.+.||+|+||.||++.+..+++.||+|++.... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP---GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc---cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 457999999999999999999999999999999987542 23345677899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~--- 159 (267)
T cd06646 85 MEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT--- 159 (267)
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc---
Confidence 9999999999998764 35899999999999999999999999999999999999999999999999998653210
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........|++.|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 160 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~ 211 (267)
T cd06646 160 ------------------------IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFD 211 (267)
T ss_pred ------------------------ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 011223568899999998852 3489999999999999999999853
No 145
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=292.29 Aligned_cols=209 Identities=22% Similarity=0.306 Sum_probs=177.1
Q ss_pred CccccccCCCeeecccccccCceEEEEEEEcCCCe---E-EEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEE
Q 002580 664 DSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---Y-FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYA 739 (905)
Q Consensus 664 ~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~---~-vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~ 739 (905)
...+++..++-.+.+.||+|+||.||+|.....+. . ||+|..+............+.+|.+++++++||||+++||
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 34456777788888999999999999999865422 3 8999988644556778899999999999999999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEecc
Q 002580 740 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 819 (905)
Q Consensus 740 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG 819 (905)
+......+++|||+|.||+|.++|+..+. .++..+...++.+.+.||+|||+++++||||-.+|+|++.++.+||+|||
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccc
Confidence 99999999999999999999999998654 58999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCcchhhhccccCCCCcccccccccccc-cccCCccccccccccC---CCCchHHHHHHHHHHHHh-C
Q 002580 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASN-SFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-E 894 (905)
Q Consensus 820 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g 894 (905)
+|+... .. .... ..--...|+|||.+.. +.++|||||||++||+++ |
T Consensus 308 Ls~~~~---~~-------------------------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g 359 (474)
T KOG0194|consen 308 LSRAGS---QY-------------------------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENG 359 (474)
T ss_pred cccCCc---ce-------------------------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccC
Confidence 986532 00 0011 1113458999999983 579999999999999998 7
Q ss_pred CCCchhh
Q 002580 895 FQPFPIL 901 (905)
Q Consensus 895 ~~PF~~~ 901 (905)
..||+..
T Consensus 360 ~~Py~g~ 366 (474)
T KOG0194|consen 360 AEPYPGM 366 (474)
T ss_pred CCCCCCC
Confidence 8899754
No 146
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=1e-29 Score=274.12 Aligned_cols=202 Identities=23% Similarity=0.331 Sum_probs=174.1
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||+|.+..++..||+|.++............+.+|+.+++.++||||+++++++.+.+..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 58999999999999999999999999999999887654445556677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 752 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 752 E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||+++++|.+++... ....+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~- 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence 999999999888642 22457899999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+||||+++|+|++|..||..
T Consensus 161 --------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~ 208 (267)
T cd08228 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred --------------------------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence 01123468889999999874 4589999999999999999999853
No 147
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=1.7e-29 Score=271.58 Aligned_cols=203 Identities=24% Similarity=0.325 Sum_probs=172.7
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
++|.+.+.||.|++|.||.|.+..+++.|++|.+....... ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 47999999999999999999999999999999987543221 2234578889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
++||+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 82 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~ 159 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICS 159 (263)
T ss_pred EEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccc
Confidence 99999999999998764 3488999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.........+++.|+|||++.+ ..++|+||||+++|+|++|+.||..
T Consensus 160 ------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 209 (263)
T cd06625 160 ------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE 209 (263)
T ss_pred ------------------------ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 0011123568889999999985 3589999999999999999999954
No 148
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=7.5e-30 Score=291.50 Aligned_cols=194 Identities=22% Similarity=0.327 Sum_probs=165.0
Q ss_pred cCCCeeecccccccCceEEEEEEEc--CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~--~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
...+|.+++.||.|+||.||+|... .++..|++|.+... ....+|+.+|+.++||||++++++|...+.+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~ 161 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTV 161 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEE
Confidence 3468999999999999999999764 35678999987643 2345799999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|++||++ +++|..++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 162 ~lv~e~~-~~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 162 CMVMPKY-KCDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred EEEehhc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9999999 57888888543 45899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. ........||+.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 239 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~ 288 (392)
T PHA03207 239 PD-------------------------TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLF 288 (392)
T ss_pred cc-------------------------cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 11 011234679999999999984 458999999999999999999994
No 149
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-31 Score=292.61 Aligned_cols=192 Identities=24% Similarity=0.352 Sum_probs=169.3
Q ss_pred cccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCC
Q 002580 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGE 758 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~ 758 (905)
+||+|+||+||-|++..|....|||-++.. +....+-+..|+.+-++|+|.|||+++|++..++++-|.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek---dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK---DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc---cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 589999999999999999999999998754 45566778899999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEc-CCCcEEEEeccCccccCCCCCCCCCcc
Q 002580 759 LFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (905)
Q Consensus 759 L~~~l~~~~~~~l--~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~-~~~~vkL~DFG~s~~~~~~~~~~~~~~ 835 (905)
|.+++...- +++ ++..+-.+.+||+.||+|||++.|||||||-+|+||+ -.|.+||+|||.|+.+..
T Consensus 659 LSsLLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--------- 728 (1226)
T KOG4279|consen 659 LSSLLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--------- 728 (1226)
T ss_pred HHHHHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc---------
Confidence 999998643 345 7888999999999999999999999999999999996 589999999999876431
Q ss_pred hhhhccccCCCCcccccccccccccccCCcccccccccc----CC-CCchHHHHHHHHHHHHhCCCCchhh
Q 002580 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF----AY-TRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~----~~-~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
-...+.++.||..|||||++. || .++|||||||++.||.||++||-.+
T Consensus 729 ------------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~El 781 (1226)
T KOG4279|consen 729 ------------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVEL 781 (1226)
T ss_pred ------------------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeec
Confidence 112356789999999999998 33 4899999999999999999999654
No 150
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=1e-29 Score=276.71 Aligned_cols=205 Identities=22% Similarity=0.335 Sum_probs=171.3
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCC-----eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~-----~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
+..++|++.+.||+|+||.||+|.+...+ ..+++|.+... ........+.+|+.++..++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~--~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 79 (283)
T cd05048 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN--AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK 79 (283)
T ss_pred CChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC--CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence 34568999999999999999999986555 68999988744 234455678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 809 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~ 809 (905)
.+..|++|||+++++|.+++..... ..+++..+..++.||+.||.|||++|++|+||||+||+++.
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE 159 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence 9999999999999999999976421 45788899999999999999999999999999999999999
Q ss_pred CCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHH
Q 002580 810 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLI 886 (905)
Q Consensus 810 ~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGv 886 (905)
++.++|+|||++........ ........+++.|+|||.+.. +.++|+|||||
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~ 214 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADY-------------------------YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGV 214 (283)
T ss_pred CCcEEECCCcceeecccccc-------------------------ccccCCCcccccccCHHHhccCcCchhhhHHHHHH
Confidence 99999999999865321110 011223456889999998863 45899999999
Q ss_pred HHHHHHh-CCCCchh
Q 002580 887 LVSKKFM-EFQPFPI 900 (905)
Q Consensus 887 il~ellt-g~~PF~~ 900 (905)
++|+|++ |..||..
T Consensus 215 il~el~~~g~~p~~~ 229 (283)
T cd05048 215 VLWEIFSYGLQPYYG 229 (283)
T ss_pred HHHHHHcCCCCCCCC
Confidence 9999997 9999853
No 151
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=6.1e-30 Score=274.25 Aligned_cols=198 Identities=34% Similarity=0.515 Sum_probs=171.2
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|++++.||+|+||+||++.+..+++.||+|++..... .........+|+.+++.++||||+++++++......+++||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI-EEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH-HHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc-cccccchhhhhhhccccccccccccccccccccccccccccc
Confidence 7899999999999999999999999999999987632 222223345699999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+.+++|.+++... ..++...+..++.||+.||.+||++||+|+||||+||+++.++.++|+|||.+.....
T Consensus 80 ~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~------- 150 (260)
T PF00069_consen 80 CPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE------- 150 (260)
T ss_dssp ETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-------
T ss_pred ccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------
Confidence 9999999999843 4489999999999999999999999999999999999999999999999999864310
Q ss_pred cchhhhccccCCCCcccccccccccccccCCcccccccccc-C---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF-A---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~-~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.........+|+.|+|||++. + ..++|+||||+++|+|++|..||...
T Consensus 151 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 151 --------------------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp --------------------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred --------------------cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 111234567899999999987 2 56999999999999999999999754
No 152
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.97 E-value=1.3e-29 Score=273.11 Aligned_cols=202 Identities=21% Similarity=0.260 Sum_probs=172.4
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+...+|.+.+.||+|+||.||+|.+..++..+|+|.+... ......+.+|+.+++.++|+||+++++++..++.++
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 78 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence 4556799999999999999999999999999999998743 223567888999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+++++|.+++.......+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......
T Consensus 79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 99999999999999977655568999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. .......+++.|+|||.+.+ +.++|+|||||++|+|++ |..||+.
T Consensus 159 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 208 (263)
T cd05052 159 Y--------------------------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 208 (263)
T ss_pred e--------------------------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 0 01112234678999998874 458999999999999998 9999853
No 153
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=2.4e-29 Score=277.81 Aligned_cols=195 Identities=24% Similarity=0.391 Sum_probs=170.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||++++++|..++.+|+||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 46999999999999999999999999999999987542 3344567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+|||++.++.++|+|||++.....
T Consensus 79 ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 152 (308)
T cd06615 79 EHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID---- 152 (308)
T ss_pred eccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccc----
Confidence 999999999999765 458999999999999999999998 5999999999999999999999999998854210
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......++++.|+|||.+.+ ..++|+|||||++|+|++|..||.
T Consensus 153 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~ 199 (308)
T cd06615 153 -------------------------SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIP 199 (308)
T ss_pred -------------------------cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Confidence 01124578999999999874 348999999999999999999985
No 154
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=9.2e-31 Score=291.62 Aligned_cols=195 Identities=24% Similarity=0.332 Sum_probs=167.9
Q ss_pred eecccccccCceEEEEEEEcCCCeEEEEEEeecc-cccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC--eEEEEE
Q 002580 675 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKG-VMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HVCLIT 751 (905)
Q Consensus 675 ~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~-~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~~lV~ 751 (905)
+....||+|+|-+||+|.+..+|..||--.++.. ....+...+++..|+.+|+.|+||||+++|++|.+.. .+.+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 5567899999999999999999988874433322 2345667799999999999999999999999998765 488999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeCCCCCCCEEEcC-CCcEEEEeccCccccCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~g--IvHrDLKp~NILl~~-~~~vkL~DFG~s~~~~~~~ 828 (905)
|++.+|+|..|+++.+ .++...+..|++||+.||.|||++. |+|||||.+||||+. .|.|||+|+|+|+....+
T Consensus 123 EL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s- 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS- 199 (632)
T ss_pred ecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc-
Confidence 9999999999999864 4899999999999999999999995 999999999999986 589999999999775421
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc--CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+|||.|||||++. .....||||||++|+||+|+.+||..
T Consensus 200 ----------------------------~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsE 245 (632)
T KOG0584|consen 200 ----------------------------HAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSE 245 (632)
T ss_pred ----------------------------ccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhh
Confidence 123478999999999998 35699999999999999999999964
No 155
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=1.3e-29 Score=276.13 Aligned_cols=198 Identities=23% Similarity=0.316 Sum_probs=168.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||+|++|.||+|.+..++..||+|.+..... .......+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE-EEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc-cCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 58899999999999999999999999999999875422 22234567789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 753 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|++ ++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV--- 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---
Confidence 996 68888886543 2568999999999999999999999999999999999999999999999999986432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|+|||.+.+ ..++|+|||||++|+|++|++||.
T Consensus 156 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~ 203 (285)
T cd07861 156 ------------------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFH 203 (285)
T ss_pred ------------------------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 01122357889999998864 447999999999999999999995
No 156
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=1.1e-29 Score=296.83 Aligned_cols=193 Identities=19% Similarity=0.281 Sum_probs=159.5
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEEe
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 743 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h------~nIv~l~~~~~~ 743 (905)
..++|++++.||+|+||.||+|.+..+++.||||+++... ........|+.+++.+.| .+++.++++|..
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 4578999999999999999999999999999999986431 223345567777766644 458889998875
Q ss_pred C-CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCC----------
Q 002580 744 K-THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG---------- 811 (905)
Q Consensus 744 ~-~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~---------- 811 (905)
. ..+|+||+++ |++|.+++.+. ..+++..+..|+.||+.||.|||+ .|||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~ 279 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA 279 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence 4 5789999998 78899888764 459999999999999999999998 5999999999999998765
Q ss_pred ------cEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 812 ------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 812 ------~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
.+||+|||.+.... ......+||+.|+|||++.+ ..++|+|
T Consensus 280 ~~~~~~~vkl~DfG~~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~Diw 329 (467)
T PTZ00284 280 LPPDPCRVRICDLGGCCDER------------------------------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMW 329 (467)
T ss_pred cCCCCceEEECCCCccccCc------------------------------cccccccCCccccCcHHhhcCCCCcHHHHH
Confidence 49999999874321 11234689999999999985 4588999
Q ss_pred HHHHHHHHHHhCCCCch
Q 002580 883 NYLILVSKKFMEFQPFP 899 (905)
Q Consensus 883 SlGvil~elltg~~PF~ 899 (905)
||||+||+|++|++||.
T Consensus 330 SlGvil~elltG~~pf~ 346 (467)
T PTZ00284 330 SMGCIIYELYTGKLLYD 346 (467)
T ss_pred HHHHHHHHHHhCCCCCC
Confidence 99999999999999995
No 157
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=1.4e-29 Score=278.70 Aligned_cols=200 Identities=22% Similarity=0.275 Sum_probs=169.4
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
..++|.+.+.||.|+||.||+|.+..++..||+|.+..... ......+.+|+.+++.++||||+++++++...+..|+
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~l 81 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTL 81 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEE
Confidence 35789999999999999999999999999999999875422 2223456789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||||+. ++|..++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 82 v~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 82 VFEYLD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred EEeccc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 999996 68988887643 358899999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||++.+ ..++|+|||||++|+|++|++||..
T Consensus 159 --------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~ 207 (301)
T cd07873 159 --------------------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPG 207 (301)
T ss_pred --------------------------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01123357889999999864 3489999999999999999999963
No 158
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=2.3e-29 Score=275.63 Aligned_cols=199 Identities=26% Similarity=0.404 Sum_probs=172.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.+.|++++.||.|+||.||++.+..++..+++|.+... .......+..|+.+++.++|+||+++++++..++.+|+|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM 87 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence 46799999999999999999999999999999998754 445567788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+++++|..++.+.. ..+++..+..++.|++.+|.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 88 IEFCPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred EecCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999999988876543 45899999999999999999999999999999999999999999999999987542211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........+++.|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 164 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 217 (292)
T cd06644 164 ------------------------LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 217 (292)
T ss_pred ------------------------ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcc
Confidence 011224568889999999852 3479999999999999999999954
No 159
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=1.8e-29 Score=281.20 Aligned_cols=204 Identities=19% Similarity=0.247 Sum_probs=167.6
Q ss_pred eccccccc--CceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 676 PIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 676 i~~~Lg~G--~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
+++.||+| +|++||++.+..+|+.||+|.+..... .......+.+|+.+++.++||||++++++|..++..|+||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC-TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc-cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 46789999 789999999999999999999875422 233456677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.++++||+.+..........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~-- 158 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL-- 158 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc--
Confidence 999999999976544568999999999999999999999999999999999999999999999998754322110000
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...........++..|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 159 ------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 159 ------------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ------------------cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 000001123457788999999863 3589999999999999999999963
No 160
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=1.5e-29 Score=272.04 Aligned_cols=201 Identities=21% Similarity=0.297 Sum_probs=170.5
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++++.||+|+||.||++.+. ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05072 3 IPRESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT----MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIY 77 (261)
T ss_pred CchHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc----hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 56678999999999999999999974 55679999876432 23467889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+++++|.+++.......++...+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 99999999999999987655668899999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. .......++..|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 158 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 207 (261)
T cd05072 158 Y--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPG 207 (261)
T ss_pred e--------------------------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCC
Confidence 0 01112345678999999874 348999999999999998 9999953
No 161
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=3.1e-29 Score=270.34 Aligned_cols=203 Identities=23% Similarity=0.290 Sum_probs=170.3
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeeccc--ccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 747 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~--~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~ 747 (905)
.+|++.+.||+|+||.||.+.+..++..||+|.+.... .........+.+|+.+++.++||||+++++++.+. ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57999999999999999999999999999999886432 11234456788999999999999999999998763 578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
+++|||+++++|.+++.+. ..+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 8999999999999998764 34788999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. .........++..|+|||.+.+ ..++|+|||||++|+|++|+.||..
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 211 (265)
T cd06652 160 CL------------------------SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAE 211 (265)
T ss_pred cc------------------------cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCc
Confidence 00 0011223468899999999874 4589999999999999999999964
No 162
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97 E-value=1.4e-29 Score=280.57 Aligned_cols=193 Identities=23% Similarity=0.331 Sum_probs=156.6
Q ss_pred cccccccCceEEEEEEEc--CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEEEEe
Q 002580 677 IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLITD 752 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~--~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lV~E 752 (905)
.++||+|+||.||+|.+. .+++.||+|.+..... ...+.+|+.+++.++||||++++++|.. +..+|++||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-----cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 457999999999999975 4678999999875421 2346789999999999999999999864 467899999
Q ss_pred ccCCCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEE----cCCCcEEEEeccCc
Q 002580 753 YCPGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 821 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~-------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl----~~~~~vkL~DFG~s 821 (905)
|+ +++|..++.... ...+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 99 568888875321 2258899999999999999999999999999999999999 45678999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~P 897 (905)
........ .........||+.|+|||++.+ ..++|+|||||++|+|++|++|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 215 (317)
T cd07868 160 RLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 215 (317)
T ss_pred eccCCCCc------------------------cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence 76432110 0112234678999999999874 3479999999999999999999
Q ss_pred ch
Q 002580 898 FP 899 (905)
Q Consensus 898 F~ 899 (905)
|.
T Consensus 216 f~ 217 (317)
T cd07868 216 FH 217 (317)
T ss_pred cc
Confidence 95
No 163
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=3.4e-29 Score=269.78 Aligned_cols=202 Identities=25% Similarity=0.356 Sum_probs=174.6
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||.|+||.||+|.+..+++.||+|.++............+.+|+++++.++|+||+++++++...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 58999999999999999999999899999999987654445555678889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 752 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 752 E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||+++++|..++... ....+++..+..++.+++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~- 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence 999999999998652 23458899999999999999999999999999999999999999999999999986432110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 161 --------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 208 (267)
T cd08224 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 208 (267)
T ss_pred --------------------------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCccc
Confidence 01123468889999999874 3489999999999999999999953
No 164
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.97 E-value=1.7e-29 Score=279.99 Aligned_cols=203 Identities=22% Similarity=0.281 Sum_probs=167.5
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeE----EEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY----FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~----vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
+...+|++.+.||+|+||.||+|.+..++.. ||+|.++.. ........+..|+.+++.++||||+++++++...
T Consensus 4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~ 81 (316)
T cd05108 4 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 81 (316)
T ss_pred cchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC
Confidence 3456899999999999999999998666553 899988643 2334556788999999999999999999998764
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+++++|+++|+|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 82 -~~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 82 -TVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred -CceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccc
Confidence 5789999999999999998643 34888899999999999999999999999999999999999999999999999764
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
...... .......++..|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 160 GADEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred cCCCcc-------------------------eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 321110 01112234678999999874 458999999999999997 9999954
No 165
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=1.8e-29 Score=272.24 Aligned_cols=201 Identities=25% Similarity=0.369 Sum_probs=173.6
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||.|+||.||++.+..++..+++|.+.............+.+|+.+++.++|+||++++++|..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 57899999999999999999999999999999887654444555677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 752 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 752 E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||+++++|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT- 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence 999999999988642 23458999999999999999999999999999999999999999999999999986532111
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|+|||.+.+ ..++|+||||+++|+|++|..||.
T Consensus 161 --------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 207 (267)
T cd08229 161 --------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFY 207 (267)
T ss_pred --------------------------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcc
Confidence 01123468899999999864 448999999999999999999985
No 166
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=2e-29 Score=291.29 Aligned_cols=193 Identities=23% Similarity=0.277 Sum_probs=164.5
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
...+|.+.+.||+|+||.||+|.+..+++.||+|.... ..+.+|+.+|++++|+||+++++++...+..|+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~l 237 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCL 237 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 35689999999999999999999999999999995421 235679999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||+++ .++|..++.... ..+++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||+++.......
T Consensus 238 v~e~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 238 VLPKY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred EEEcc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99999 578888886542 3589999999999999999999999999999999999999999999999999865431110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
.......+||+.|+|||++.+ ..++|+|||||+||+|++|..|+
T Consensus 316 -------------------------~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 -------------------------TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred -------------------------cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 001224579999999999974 45899999999999999987654
No 167
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=3.7e-29 Score=268.07 Aligned_cols=199 Identities=24% Similarity=0.388 Sum_probs=171.0
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVCLIT 751 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~lV~ 751 (905)
+|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++|+|++++++.+.. +..+|++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 58999999999999999999999999999999875422 33445668889999999999999999998864 45689999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~--- 156 (257)
T cd08223 80 GFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC--- 156 (257)
T ss_pred cccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC---
Confidence 99999999999987555668999999999999999999999999999999999999999999999999986542110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|+|||++.+ +.++|+|||||++|+|++|+.||.
T Consensus 157 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~ 203 (257)
T cd08223 157 ------------------------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFN 203 (257)
T ss_pred ------------------------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 11224568899999999874 458999999999999999999985
No 168
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=4.7e-29 Score=275.02 Aligned_cols=214 Identities=35% Similarity=0.544 Sum_probs=174.3
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||+|+||.||++.+..+++.|++|.+.+...........+.+|+.+++.++||||+++++.+..++.+|+||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47999999999999999999999999999999988654434445667889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++|++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 999999999999765 358999999999999999999999999999999999999999999999999986422111100
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
...... .............++..|+|||.+.. ..++|+|||||++|+|++|..||.
T Consensus 159 ~~~~~~------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~ 217 (305)
T cd05609 159 LYEGHI------------EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFF 217 (305)
T ss_pred cccccc------------ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 000000 00000011123568899999999863 568999999999999999999985
No 169
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.96 E-value=2e-29 Score=277.80 Aligned_cols=202 Identities=22% Similarity=0.274 Sum_probs=167.1
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeE--EEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~--vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 745 (905)
+..++|++.+.||+|+||.||+|.+..++.. +++|.++.. ........+.+|+.++.++ +|+||+++++++..++
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~ 81 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 81 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc--CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence 4567899999999999999999998777754 466665532 2344556788899999999 8999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC
Q 002580 746 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~ 811 (905)
.+|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 161 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence 9999999999999999997542 13578999999999999999999999999999999999999999
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHH
Q 002580 812 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILV 888 (905)
Q Consensus 812 ~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil 888 (905)
.+||+|||++...... .......++..|+|||.+.+ ..++|+|||||++
T Consensus 162 ~~kl~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 162 VAKIADFGLSRGQEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred cEEeCccccCcccchh----------------------------hhcccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 9999999998431100 00111234668999998873 4689999999999
Q ss_pred HHHHh-CCCCchh
Q 002580 889 SKKFM-EFQPFPI 900 (905)
Q Consensus 889 ~ellt-g~~PF~~ 900 (905)
|+|++ |..||..
T Consensus 214 ~ellt~g~~p~~~ 226 (303)
T cd05088 214 WEIVSLGGTPYCG 226 (303)
T ss_pred HHHHhcCCCCccc
Confidence 99998 9999853
No 170
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.96 E-value=2.1e-29 Score=273.94 Aligned_cols=199 Identities=24% Similarity=0.398 Sum_probs=172.7
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.+++.||.|+||.||++.+..++..+|+|.+... .......+..|+.+++.++|+||+++++++..+...|+|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 35799999999999999999999889999999998743 445567788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+++++|..++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~--- 156 (280)
T cd06611 81 IEFCDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST--- 156 (280)
T ss_pred eeccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccc---
Confidence 99999999999987643 35899999999999999999999999999999999999999999999999987543211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........+++.|+|||.+.. ..++|+|||||++|+|++|+.||..
T Consensus 157 ------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~ 210 (280)
T cd06611 157 ------------------------LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHE 210 (280)
T ss_pred ------------------------ccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCccc
Confidence 011224568999999999751 3479999999999999999999954
No 171
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=4.8e-29 Score=267.16 Aligned_cols=200 Identities=25% Similarity=0.417 Sum_probs=174.6
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++++.||.|+||.||.+.+..++..+++|.+..... .......+.+|+.++++++|+||+++++++.+.+.++++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL-SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc-chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 58999999999999999999999999999999875432 33455678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~--- 156 (256)
T cd08221 80 YANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS--- 156 (256)
T ss_pred ecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc---
Confidence 99999999999876555689999999999999999999999999999999999999999999999999865431110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......+++.|+|||.+.+ ..++|+||||+++|+|++|..||..
T Consensus 157 ------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~ 203 (256)
T cd08221 157 ------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDA 203 (256)
T ss_pred ------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCC
Confidence 1223568999999999874 4589999999999999999999864
No 172
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=3.1e-29 Score=275.35 Aligned_cols=196 Identities=22% Similarity=0.355 Sum_probs=170.6
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
.+|++.+.||+|+||.||++.+..++..|++|.+.... ......+.+|+.+++.+.|+||++++++|......|+||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~---~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC---cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 58999999999999999999999999999999987542 223466788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++... .++...+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 97 e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred cccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 999999999998653 47899999999999999999999999999999999999999999999999986432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+|||||++|+|++|+.||..
T Consensus 171 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~ 218 (296)
T cd06654 171 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLN 218 (296)
T ss_pred ------------------------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 01123468899999999874 4689999999999999999999953
No 173
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-31 Score=315.34 Aligned_cols=205 Identities=25% Similarity=0.366 Sum_probs=176.1
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
-++.-...||.|.||.||.|.+..+|...|+|-++..... ......+.+|..+|..++|||+|++|++=.+.+.++|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 3566778899999999999999999999999988765332 445567789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||+||+|.+++...+ -.++.....+..|++.|+.|||++|||||||||.||+++.+|.+|++|||.|..+...-+..
T Consensus 1314 EyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~ 1391 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTM 1391 (1509)
T ss_pred HHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcC
Confidence 9999999999997643 37777788899999999999999999999999999999999999999999997765331111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccCC------CCchHHHHHHHHHHHHhCCCCchhhh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY------TRMTRYNYLILVSKKFMEFQPFPILC 902 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~------~~sDiwSlGvil~elltg~~PF~~~~ 902 (905)
.......+||+.|||||++.+. .+.|||||||++.||+||+.||...-
T Consensus 1392 -----------------------~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d 1445 (1509)
T KOG4645|consen 1392 -----------------------PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD 1445 (1509)
T ss_pred -----------------------CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc
Confidence 0123467999999999999953 38999999999999999999997653
No 174
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.96 E-value=4.1e-29 Score=273.12 Aligned_cols=204 Identities=21% Similarity=0.275 Sum_probs=170.2
Q ss_pred ccCCCeeecccccccCceEEEEEEEc-----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
+..++|.+.+.||+|+||.||++.+. .++..+|+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVE 78 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 34568999999999999999999852 34567999988643 34456678899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCc
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQP-----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~-----------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~ 812 (905)
.+..|+||||+++++|.+++.... ...+++..+..++.||+.||.|||++|++||||||+|||++.++.
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCc
Confidence 999999999999999999997542 124899999999999999999999999999999999999999999
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHH
Q 002580 813 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVS 889 (905)
Q Consensus 813 vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ 889 (905)
++|+|||++........ ........+++.|+|||++.+ ..++|+|||||++|
T Consensus 159 ~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~ 213 (288)
T cd05093 159 VKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW 213 (288)
T ss_pred EEeccCCccccccCCce-------------------------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 99999999865321110 011123346788999999873 45899999999999
Q ss_pred HHHh-CCCCchh
Q 002580 890 KKFM-EFQPFPI 900 (905)
Q Consensus 890 ellt-g~~PF~~ 900 (905)
+|++ |..||..
T Consensus 214 ~l~t~g~~p~~~ 225 (288)
T cd05093 214 EIFTYGKQPWYQ 225 (288)
T ss_pred HHHhCCCCCCCC
Confidence 9998 9999854
No 175
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.96 E-value=2e-29 Score=282.01 Aligned_cols=206 Identities=25% Similarity=0.340 Sum_probs=167.5
Q ss_pred cccCCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 741 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~ 741 (905)
++..++|++.+.||+|+||.||+|.+.. +++.||+|++.... .......+..|+.++.++ +|+||+++++++
T Consensus 3 ~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~ 80 (337)
T cd05054 3 EFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA--TASEYKALMTELKILIHIGHHLNVVNLLGAC 80 (337)
T ss_pred ccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC--CHHHHHHHHHHHHHHHhhccCcchhheeeeE
Confidence 3455689999999999999999997543 45789999987432 233456678899999999 899999999987
Q ss_pred Ee-CCeEEEEEeccCCCCHHHHHhhCCC----------------------------------------------------
Q 002580 742 QT-KTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 768 (905)
Q Consensus 742 ~~-~~~~~lV~E~~~gg~L~~~l~~~~~---------------------------------------------------- 768 (905)
.. +..++++|||+++++|.+++.....
T Consensus 81 ~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
T cd05054 81 TKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDE 160 (337)
T ss_pred ecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccch
Confidence 64 4678999999999999999864321
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhcc
Q 002580 769 -------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRR 841 (905)
Q Consensus 769 -------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~ 841 (905)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.........
T Consensus 161 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~----------- 229 (337)
T cd05054 161 EGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY----------- 229 (337)
T ss_pred hhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch-----------
Confidence 25788999999999999999999999999999999999999999999999998654311110
Q ss_pred ccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 842 HKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......++..|+|||++.+ +.++|+|||||+||+|++ |..||..
T Consensus 230 --------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~ 278 (337)
T cd05054 230 --------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPG 278 (337)
T ss_pred --------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCC
Confidence 11123456778999998874 568999999999999997 9999953
No 176
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=6.2e-29 Score=266.96 Aligned_cols=198 Identities=25% Similarity=0.386 Sum_probs=172.4
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||.|+||.||+|.+..++..+++|++... .......+.+|+.+++.++||||+++++++...+.+|++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE---PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC---chhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5899999999999999999999989999999999754 2335677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++.... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~---- 154 (262)
T cd06613 80 EYCGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT---- 154 (262)
T ss_pred eCCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhh----
Confidence 9999999999987642 35899999999999999999999999999999999999999999999999998653211
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccCC------CCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY------TRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~------~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........++..|+|||.+.+. .++|+|||||++|+|++|..||..
T Consensus 155 -----------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~ 206 (262)
T cd06613 155 -----------------------IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFD 206 (262)
T ss_pred -----------------------hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 0112235688899999998633 379999999999999999999854
No 177
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.96 E-value=3e-29 Score=272.49 Aligned_cols=203 Identities=19% Similarity=0.237 Sum_probs=169.7
Q ss_pred cCCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
..++|.+.+.||+|+||.||+|.+.. ++..||+|.++... .......+.+|+++++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 80 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA--SNDARKDFEREAELLTNFQHENIVKFYGVCTEG 80 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC--CHHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence 35679999999999999999998743 36789999987542 233457888999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCc
Q 002580 745 THVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~ 812 (905)
...|++|||+++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+||+++.++.
T Consensus 81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence 99999999999999999997542 234788899999999999999999999999999999999999999
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHH
Q 002580 813 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVS 889 (905)
Q Consensus 813 vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ 889 (905)
++|+|||++........ ........+++.|+|||++.+ ..++|+|||||++|
T Consensus 161 ~kl~d~g~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 215 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLW 215 (280)
T ss_pred EEECCcccceecccCcc-------------------------eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHH
Confidence 99999999864321110 011123346789999999874 45899999999999
Q ss_pred HHHh-CCCCch
Q 002580 890 KKFM-EFQPFP 899 (905)
Q Consensus 890 ellt-g~~PF~ 899 (905)
+|++ |..||.
T Consensus 216 e~~~~g~~p~~ 226 (280)
T cd05049 216 EIFTYGKQPWY 226 (280)
T ss_pred HHHhcCCCCCC
Confidence 9998 999985
No 178
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=1.7e-29 Score=271.20 Aligned_cols=199 Identities=33% Similarity=0.565 Sum_probs=175.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||.|+||.||+|.+..++..||+|.+.+...........+.+|+.++++++||||+++++++......|+|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 58999999999999999999998999999999987654444567788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+.|++|..++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----
Confidence 99999999999765 458999999999999999999999999999999999999999999999999986543110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
......|+..|+|||.+.. ..++|+||||+++|+|++|..||...
T Consensus 155 ------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 202 (258)
T cd05578 155 ------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGH 202 (258)
T ss_pred ------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCC
Confidence 1123468889999999874 56999999999999999999999753
No 179
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.96 E-value=6.2e-29 Score=270.64 Aligned_cols=196 Identities=26% Similarity=0.402 Sum_probs=169.4
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|++.+.||.|+||.||++.+..++..+++|.+... .......+.+|+.+++.++|+||++++++|...+..|+||||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC---CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 68889999999999999999999999999998654 344566788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+++++|..++... ...+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 84 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~------ 156 (282)
T cd06643 84 CAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT------ 156 (282)
T ss_pred cCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc------
Confidence 9999999887653 245899999999999999999999999999999999999999999999999998543210
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........+++.|+|||++.. ..++|+|||||++|+|++|.+||..
T Consensus 157 ---------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 210 (282)
T cd06643 157 ---------------------IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHE 210 (282)
T ss_pred ---------------------ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccc
Confidence 011234568999999999841 2489999999999999999999964
No 180
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.96 E-value=3.4e-29 Score=270.88 Aligned_cols=198 Identities=25% Similarity=0.364 Sum_probs=168.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC------
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK------ 744 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~------ 744 (905)
+.|.+.+.||+|+||.||+|.+..+++.+|+|.+.... .....+..|+.++..+ +|+||++++++|...
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 46889999999999999999999999999999987542 2235677899999988 799999999998753
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+|++|||+.+++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999999999999998755566899999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCC
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQ 896 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~ 896 (905)
... ........|++.|+|||++.+ ..++|+|||||++|+|++|..
T Consensus 162 ~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~ 214 (272)
T cd06637 162 DRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 214 (272)
T ss_pred ccc---------------------------cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 211 011234578999999999852 238999999999999999999
Q ss_pred Cchh
Q 002580 897 PFPI 900 (905)
Q Consensus 897 PF~~ 900 (905)
||..
T Consensus 215 p~~~ 218 (272)
T cd06637 215 PLCD 218 (272)
T ss_pred Cccc
Confidence 9953
No 181
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.96 E-value=4.4e-29 Score=267.72 Aligned_cols=199 Identities=24% Similarity=0.341 Sum_probs=166.4
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
+.++|++.+.||+|+||.||++... .+..+|+|.+..... ....+.+|+.+++.++||||+++++++...+..|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 76 (256)
T cd05114 2 NPSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYI 76 (256)
T ss_pred CHHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEE
Confidence 3467999999999999999999875 456799998764422 23567889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||||+++++|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY 155 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence 999999999999987543 3588999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......++..|+|||.+.+ ..++|+||||+++|+|++ |+.||..
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~ 204 (256)
T cd05114 156 --------------------------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEK 204 (256)
T ss_pred --------------------------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCC
Confidence 01122345678999999874 458999999999999999 8999853
No 182
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=2.7e-29 Score=283.34 Aligned_cols=190 Identities=22% Similarity=0.307 Sum_probs=162.4
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
...+|.+++.||+|+||.||+|.+..++..||+|+..+. ....|+.+++.++|+||+++++++...+..|+
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 345799999999999999999999999999999975433 23458899999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
|||++ .++|.+++... ...+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 210 (357)
T PHA03209 135 VLPHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA-- 210 (357)
T ss_pred EEEcc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--
Confidence 99999 56888888654 345899999999999999999999999999999999999999999999999998642211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
.......||+.|+|||++.+ ..++|+|||||++|+|+++..|+
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 --------------------------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred --------------------------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 01124568999999999974 56999999999999999865443
No 183
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.96 E-value=2.4e-30 Score=283.16 Aligned_cols=200 Identities=27% Similarity=0.372 Sum_probs=175.0
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHH-----HHHHHHHHHHHHhCC---CCCcceEEEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----VHRACAEREILDMLD---HPFVPALYASF 741 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~-----~~~~~~E~~il~~l~---h~nIv~l~~~~ 741 (905)
+...|..++.||.|+||.|++|.++.+...|++|.+.+....-... ...+-.|+.||..++ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 3457999999999999999999999999999999998865432222 223457999999997 99999999999
Q ss_pred EeCCeEEEEEecc-CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 742 QTKTHVCLITDYC-PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 742 ~~~~~~~lV~E~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
++++++||+||-. +|.+|++++... ..+++.++..|++||+.|+++||++||||||||-+|++++.+|.+||+|||.
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccc
Confidence 9999999999985 567999999875 4499999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHHHhCCC
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKKFMEFQ 896 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~elltg~~ 896 (905)
+......+ ...++||..|.|||++.|. ..-|||++|++||.+++...
T Consensus 717 aa~~ksgp-----------------------------fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivyken 767 (772)
T KOG1152|consen 717 AAYTKSGP-----------------------------FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKEN 767 (772)
T ss_pred hhhhcCCC-----------------------------cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccC
Confidence 97755332 2468999999999999973 47899999999999999999
Q ss_pred Cchh
Q 002580 897 PFPI 900 (905)
Q Consensus 897 PF~~ 900 (905)
||+.
T Consensus 768 pyyn 771 (772)
T KOG1152|consen 768 PYYN 771 (772)
T ss_pred CCcC
Confidence 9974
No 184
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=5.3e-29 Score=271.32 Aligned_cols=204 Identities=20% Similarity=0.285 Sum_probs=169.0
Q ss_pred cCCCeeecccccccCceEEEEEEEc----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
..+.|++.+.||+|+||.||+|.+. .++..+++|.+... ........+.+|+.+++.++||||+++++++....
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 80 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ 80 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC--CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence 4568999999999999999999853 35678999998743 23445567889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC
Q 002580 746 HVCLITDYCPGGELFLLLDRQP---------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 810 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~---------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~ 810 (905)
..|++|||+++++|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence 9999999999999999986331 1247888899999999999999999999999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHH
Q 002580 811 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLIL 887 (905)
Q Consensus 811 ~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvi 887 (905)
+.+||+|||+++....... ........++..|+|||++.+ ..++|+|||||+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 215 (283)
T cd05090 161 LHVKISDLGLSREIYSADY-------------------------YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV 215 (283)
T ss_pred CcEEeccccccccccCCcc-------------------------eecccCCCccceecChHHhccCCCCchhhhHHHHHH
Confidence 9999999999865431110 011223446778999999873 458999999999
Q ss_pred HHHHHh-CCCCchh
Q 002580 888 VSKKFM-EFQPFPI 900 (905)
Q Consensus 888 l~ellt-g~~PF~~ 900 (905)
+|+|++ |..||..
T Consensus 216 l~el~~~g~~p~~~ 229 (283)
T cd05090 216 LWEIFSFGLQPYYG 229 (283)
T ss_pred HHHHHcCCCCCCCC
Confidence 999998 9999853
No 185
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=5.7e-29 Score=270.98 Aligned_cols=198 Identities=22% Similarity=0.321 Sum_probs=168.9
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||++.+..+++.||+|.+..... .......+.+|+.+++.++|+||+++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESED-DPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeeccc-CccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 479999999999999999999999999999999875421 2223345778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|..++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07847 80 EYCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-- 155 (286)
T ss_pred eccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc--
Confidence 999988888776543 3489999999999999999999999999999999999999999999999999865431110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......++..|+|||.+.+ ..++|+||||+++|+|++|..||.
T Consensus 156 -------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~ 202 (286)
T cd07847 156 -------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWP 202 (286)
T ss_pred -------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCC
Confidence 1123457889999999864 348999999999999999999995
No 186
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-30 Score=243.50 Aligned_cols=198 Identities=23% Similarity=0.342 Sum_probs=171.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
.+|.-.++||+|.||+||++++..+++.||+|.+.... .+........+|+-+|+.++|.||++++++...++.+-+|+
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldd-ddegvpssalreicllkelkhknivrl~dvlhsdkkltlvf 80 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDD-DDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccC-CCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeH
Confidence 46777889999999999999999999999999987642 23334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||| ..+|..+.... ++.+....++.++.|++.||.|+|++++.||||||.|+||+.+|.+||+|||+++..+.
T Consensus 81 e~c-dqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgi----- 153 (292)
T KOG0662|consen 81 EFC-DQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGI----- 153 (292)
T ss_pred HHh-hHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCC-----
Confidence 999 67899888765 34589999999999999999999999999999999999999999999999999976542
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHH-hCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKF-MEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~ell-tg~~PF~ 899 (905)
+....+..+-|.+|.+|.++.| ++..|+||.||++.|+. .|.+.|+
T Consensus 154 ----------------------pvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfp 204 (292)
T KOG0662|consen 154 ----------------------PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFP 204 (292)
T ss_pred ----------------------ceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCC
Confidence 2233345577999999999995 56899999999999999 5666675
No 187
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.96 E-value=7.6e-29 Score=266.66 Aligned_cols=201 Identities=24% Similarity=0.320 Sum_probs=169.4
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++.+.||+|++|.||+|.+. ++..||+|.++.... ....+.+|+.+++.++|+||+++++++...+..|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIY 77 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCee
Confidence 45678999999999999999999974 457799999875422 2356788999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+++++|.+++.......++...+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999999999987654568999999999999999999999999999999999999999999999999986643110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. ........+..|+|||.+.+ ..++|+||||+++|+|++ |+.||..
T Consensus 158 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 207 (261)
T cd05068 158 Y--------------------------EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPG 207 (261)
T ss_pred c--------------------------cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 0 00111223468999999874 458999999999999999 9999954
No 188
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=4.2e-29 Score=272.41 Aligned_cols=197 Identities=28% Similarity=0.417 Sum_probs=169.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++++.||+|+||.||++.+..++..||+|.+... ........+.+|+.+++.++|+||+++++++...+..|+||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLE--LDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecc--cCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 3689999999999999999999989999999988643 23444567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 752 DYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||+++++|..++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-- 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC--
Confidence 9999999999887531 2358999999999999999999997 59999999999999999999999999998543210
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---------CCCchHHHHHHHHHHHHhCCCCch
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---------YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---------~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+++.|+|||.+.+ ..++|+|||||++|+|++|+.||.
T Consensus 157 ---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 208 (286)
T cd06622 157 ---------------------------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYP 208 (286)
T ss_pred ---------------------------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 1123457889999999853 348999999999999999999995
No 189
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=5e-30 Score=295.85 Aligned_cols=208 Identities=23% Similarity=0.327 Sum_probs=176.4
Q ss_pred cccCCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 742 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 742 (905)
.+...+..+.+.||+|.||+||+++... ....||||.++.. .+......|++|++++..++|||||+|+|+|.
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~ 559 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCR 559 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEc
Confidence 4667788889999999999999998632 3467999999864 34457789999999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC
Q 002580 743 TKTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 810 (905)
Q Consensus 743 ~~~~~~lV~E~~~gg~L~~~l~~~~------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~ 810 (905)
.++.+|||+|||..|+|.++|.... ..+++..+.+.|+.||+.||.||-++.+|||||-..|+||.++
T Consensus 560 ~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 560 EGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred cCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 9999999999999999999997531 2238889999999999999999999999999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---CCCCchHHHHHHH
Q 002580 811 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---AYTRMTRYNYLIL 887 (905)
Q Consensus 811 ~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---~~~~sDiwSlGvi 887 (905)
..|||+|||+++.+....- ++......-..+|||||.+. .+++||||||||+
T Consensus 640 l~VKIsDfGLsRdiYssDY-------------------------Yk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVv 694 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDY-------------------------YKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVV 694 (774)
T ss_pred eEEEecccccchhhhhhhh-------------------------hcccCCceeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence 9999999999987542221 22221223356899999998 3679999999999
Q ss_pred HHHHH-hCCCCchhhh
Q 002580 888 VSKKF-MEFQPFPILC 902 (905)
Q Consensus 888 l~ell-tg~~PF~~~~ 902 (905)
|||++ +|..||+.++
T Consensus 695 LWEIFsyG~QPy~glS 710 (774)
T KOG1026|consen 695 LWEIFSYGKQPYYGLS 710 (774)
T ss_pred hhhhhccccCcccccc
Confidence 99999 7999997654
No 190
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=5.5e-29 Score=270.42 Aligned_cols=193 Identities=30% Similarity=0.459 Sum_probs=166.8
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||+|+||.||+|.+..+++.||+|.+.+...........+..|+.+++.++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999999999999999999765443344455667899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 002580 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (905)
Q Consensus 760 ~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~ 839 (905)
.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~------------ 148 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG------------ 148 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC------------
Confidence 99998765456999999999999999999999999999999999999999999999999988543210
Q ss_pred ccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......++..|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 149 ----------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 149 ----------------KKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred ----------------CccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 01123457889999999874 4489999999999999999999954
No 191
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=5.8e-29 Score=273.29 Aligned_cols=196 Identities=22% Similarity=0.350 Sum_probs=170.6
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
.+|.+.+.||.|+||.||++.+..+++.||+|.+.... ......+.+|+.+++.++|+||++++++|..++..|+||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ---QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc---cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 68999999999999999999999999999999987542 233466788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 96 EYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred cccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 99999999999865 347899999999999999999999999999999999999999999999999986432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+|||||++|++++|..||..
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~ 217 (297)
T cd06656 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (297)
T ss_pred ------------------------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01123468899999999874 3589999999999999999999953
No 192
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.96 E-value=6.2e-29 Score=269.91 Aligned_cols=205 Identities=16% Similarity=0.163 Sum_probs=167.6
Q ss_pred ccCCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
+..++|++.+.||+|+||.||++.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 80 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 80 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 445789999999999999999998642 35679999886431 23344568899999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEE
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPT--------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 815 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~--------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL 815 (905)
....++||||+++++|.+++..... ..++...+..++.|++.||.|||+.|++|+||||+||+++.++.++|
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999999875321 23567888999999999999999999999999999999999999999
Q ss_pred EeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH
Q 002580 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF 892 (905)
Q Consensus 816 ~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell 892 (905)
+|||++......... .......+++.|+|||++.+ +.++|+|||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~ 215 (277)
T cd05062 161 GDFGMTRDIYETDYY-------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 215 (277)
T ss_pred CCCCCccccCCccee-------------------------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHH
Confidence 999998654321110 01112345788999999874 55899999999999999
Q ss_pred h-CCCCchh
Q 002580 893 M-EFQPFPI 900 (905)
Q Consensus 893 t-g~~PF~~ 900 (905)
+ |..||..
T Consensus 216 ~~~~~p~~~ 224 (277)
T cd05062 216 TLAEQPYQG 224 (277)
T ss_pred cCCCCCCCC
Confidence 8 7889864
No 193
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=1.9e-29 Score=274.82 Aligned_cols=196 Identities=21% Similarity=0.330 Sum_probs=166.2
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||.|+||.||+|.+..+|..||+|.++.... .......+.+|+.+++.++|+||+++++++.+.+..|+++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 48899999999999999999999999999999875422 22233456789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---- 153 (284)
T cd07839 80 YCD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV---- 153 (284)
T ss_pred cCC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC----
Confidence 995 58888776542 458999999999999999999999999999999999999999999999999986532110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCc
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF 898 (905)
.......+++.|+|||++.+ ..++|+|||||++|+|++|..||
T Consensus 154 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~ 200 (284)
T cd07839 154 -----------------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 200 (284)
T ss_pred -----------------------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCC
Confidence 11123457889999999864 45899999999999999999886
No 194
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=7.7e-29 Score=269.81 Aligned_cols=191 Identities=32% Similarity=0.537 Sum_probs=158.4
Q ss_pred cccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHH---hCCCCCcceEEEEEEeCCeEEEEEeccC
Q 002580 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD---MLDHPFVPALYASFQTKTHVCLITDYCP 755 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~---~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 755 (905)
.||+|+||.||++.+..+++.+|+|.+.+...........+..|..++. ..+||||+.+++++...+..|+||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999999999999999997654333332333444444433 3479999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcc
Q 002580 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (905)
Q Consensus 756 gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~ 835 (905)
+++|.+++..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 81 ~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-------- 150 (279)
T cd05633 81 GGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (279)
T ss_pred CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--------
Confidence 99999998764 35999999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......||+.|+|||.+.. ..++|+|||||++|+|++|..||..
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 198 (279)
T cd05633 151 ---------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQ 198 (279)
T ss_pred ---------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCC
Confidence 0112468999999999862 4589999999999999999999953
No 195
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.96 E-value=9.6e-29 Score=266.53 Aligned_cols=205 Identities=25% Similarity=0.378 Sum_probs=171.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCH------HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR------NKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~------~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
+|.+...||.|++|.||+|.+..++..+|+|.+........ .....+.+|+.+++.++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 47788899999999999999988999999998876433221 233567889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
.+++|||+++++|..++... ..+++..+..++.|++.||.|||++|++||||+|+||++++++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999999764 4488999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.... ...........|++.|+|||.+.+ ..++|+|||||++|+|++|+.||..
T Consensus 159 ~~~~---------------------~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 214 (267)
T cd06628 159 NSLS---------------------TKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPD 214 (267)
T ss_pred cccc---------------------CCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 1110 000111234568899999999874 4589999999999999999999964
No 196
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.96 E-value=5.8e-29 Score=269.74 Aligned_cols=205 Identities=17% Similarity=0.184 Sum_probs=170.4
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCC-----CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
+..++|.+.+.||+|+||.||++.+... +..||+|.+.... .......+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVST 80 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence 5567899999999999999999998644 4789999986542 23345567889999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEE
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 815 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL 815 (905)
....|+||||+++++|.+++.... ...+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||
T Consensus 81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence 999999999999999999987532 123678889999999999999999999999999999999999999999
Q ss_pred EeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH
Q 002580 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF 892 (905)
Q Consensus 816 ~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell 892 (905)
+|||+++....... ........++..|+|||.+.. ..++|+|||||++|+++
T Consensus 161 ~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 215 (277)
T cd05032 161 GDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMA 215 (277)
T ss_pred CCcccchhhccCcc-------------------------cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhh
Confidence 99999865431111 011223456789999999863 45899999999999999
Q ss_pred h-CCCCchh
Q 002580 893 M-EFQPFPI 900 (905)
Q Consensus 893 t-g~~PF~~ 900 (905)
+ |..||..
T Consensus 216 t~g~~p~~~ 224 (277)
T cd05032 216 TLAEQPYQG 224 (277)
T ss_pred ccCCCCCcc
Confidence 8 9999964
No 197
>PRK13560 hypothetical protein; Provisional
Probab=99.96 E-value=4.4e-28 Score=302.67 Aligned_cols=415 Identities=11% Similarity=0.072 Sum_probs=290.5
Q ss_pred cceeEEeeeecCCcccccccchHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCC
Q 002580 169 NSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGT 248 (905)
Q Consensus 169 ~~~~~~~~i~~~~~~~~~l~~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~ 248 (905)
.+.++..||++++..+++|.++++.++.++++++++++++|. +|+|+++|++|++++||+.+|++|+++..+.++..
T Consensus 181 ~~~g~~~DIT~rk~ae~~l~~~~~~l~~l~e~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~ 257 (807)
T PRK13560 181 QVDGFAEDITERKRAEERIDEALHFLQQLLDNIADPAFWKDE---DAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQP 257 (807)
T ss_pred EEEEEEEccchHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC---CCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcch
Confidence 467888999999999999999999999999999999999998 99999999999999999999999999887776655
Q ss_pred ChHHHHHHHHHHHcCCcEEEEEEEEccCCCeEEEEEEe--eeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChhH
Q 002580 249 DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTI--APIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPES 326 (905)
Q Consensus 249 ~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~s~--~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~~ 326 (905)
........+..+..++....+...+++||+.+|+++.+ .|+.|.+|.+.+++++++|||++|++|++|+.+++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se~~---- 333 (807)
T PRK13560 258 ADDYQEADAAKFDADGSQIIEAEFQNKDGRTRPVDVIFNHAEFDDKENHCAGLVGAITDISGRRAAERELLEKEDM---- 333 (807)
T ss_pred hHHHHHHHHHHhccCCceEEEEEEEcCCCCEEEEEEEecceEEEcCCCCEEEEEEEEEechHHHHHHHHHHHHHHH----
Confidence 44444555666677777888888999999999776654 566799999999999999999999999987642211
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCCcccc-CCCCcc-cccCCCchhhhhhccccCccCCCCCCCcCCCC-------C
Q 002580 327 LIRYDARQKEMATSSVTELVQAMKKPRSLSES-TNRPPI-IRKSEGGVEEERAGALGRRKSENVPPPRRNSY-------G 397 (905)
Q Consensus 327 l~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~ 397 (905)
+..+++...++...... +....+ +......+++...+++|+......+....... .
T Consensus 334 ---------------l~~l~~~~~~~i~~~d~~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~ 398 (807)
T PRK13560 334 ---------------LRAIIEAAPIAAIGLDADGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWY 398 (807)
T ss_pred ---------------HHHHHHhCcccEEEEcCCCCEEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcC
Confidence 12233334433332222 122222 12223356677778888876655443211100 0
Q ss_pred CCc-------------cccccccccccccccccCCccccccccccccCCCCCCCccccchhccCCCCCCCCCCCCCchhh
Q 002580 398 GGC-------------RTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDD 464 (905)
Q Consensus 398 ~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~e~ 464 (905)
... ......+........++.+...+......+ +....+..........|||++
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~p-------------~~d~~g~~~~~~~~~~DITer 465 (807)
T PRK13560 399 PDGRPMAFDACPMAKTIKGGKIFDGQEVLIEREDDGPADCSAYAEP-------------LHDADGNIIGAIALLVDITER 465 (807)
T ss_pred CcCCcchhhhhhHHHHHhcCCcccCceEEEEcCCCCeEEEEEEEee-------------eECCCCCEEEEEEEeehhhhH
Confidence 000 000000111111222333333333332222 111222233334456899999
Q ss_pred HHHHHhhhhcccHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCC--CCcCcCCCCCHHHHHHHHHH
Q 002580 465 KVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAA 542 (905)
Q Consensus 465 k~~e~~~~~~~~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~~~~~ 542 (905)
|+.|+++++ .+.++++++++++.++.. .+..+.+|.....++||+++++++.. +..+.+|++.......+...
T Consensus 466 k~~E~~L~~---~~~~~e~~~~~i~~~~~~--~~~~~~~~~~~~~~~G~~~~e~~~~~~~~~~~~~p~d~~~~~~~~~~~ 540 (807)
T PRK13560 466 KQVEEQLLL---ANLIVENSPLVLFRWKAE--EGWPVELVSKNITQFGYEPDEFISGKRMFAAIIHPADLEQVAAEVAEF 540 (807)
T ss_pred HHHHHHHHH---HHHHHhcCCceEEEEecC--CCceEEEecchhhhcCCCHHHhhcccchHhhhcChhhHHHHHHHHHHH
Confidence 999999876 467899999999998874 34455666666788999999998643 45678888888777777776
Q ss_pred HHcCC-cEEEEEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccccCCchhhhHHHHHHHHHHhhhhhh
Q 002580 543 IDNQT-DVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNE 621 (905)
Q Consensus 543 l~~g~-~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~~~~~~~~e~~~l~~~~~~~~~~ 621 (905)
+..|. .+..++++.++||..+|+.....|++|.+|.+.+++++++|||++|++|++++ .+.++...++..++|.+.+
T Consensus 541 ~~~g~~~~~~e~r~~~~dG~~~w~~~~~~~~~d~~G~~~~~~g~~~DITerK~aE~~L~--~a~~~~~~~l~~isHelrn 618 (807)
T PRK13560 541 AAQGVDRFEQEYRILGKGGAVCWIDDQSAAERDEEGQISHFEGIVIDISERKHAEEKIK--AALTEKEVLLKEIHHRVKN 618 (807)
T ss_pred HhcCCccceeEEEEEcCCCCEEEEEecceeeeCCCCCEEEEEEEEechHHHHHHHHHHH--HHHHHHHHHHHHhHHHHhC
Confidence 66653 57889999999999999999999999999999999999999999999766543 3344555666666666655
Q ss_pred hhhc
Q 002580 622 AVKE 625 (905)
Q Consensus 622 ~~~~ 625 (905)
.+..
T Consensus 619 pL~~ 622 (807)
T PRK13560 619 NLQI 622 (807)
T ss_pred hHHH
Confidence 5443
No 198
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.96 E-value=9e-29 Score=271.67 Aligned_cols=196 Identities=23% Similarity=0.376 Sum_probs=170.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
.+|++.+.||.|++|.||++.+..+++.|++|.+... .......+.+|+.+++.++|+||+++++++...+.+|+|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ---KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc---cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 5799999999999999999999999999999998754 2234567788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|..++... .+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 96 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 96 EYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred EecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999999988653 48999999999999999999999999999999999999999999999999986532110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 170 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~ 217 (296)
T cd06655 170 ------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (296)
T ss_pred ------------------------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 01123468899999999874 4589999999999999999999953
No 199
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.96 E-value=7e-29 Score=267.40 Aligned_cols=200 Identities=23% Similarity=0.316 Sum_probs=166.2
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++.+.||+|+||.||+|.+..++ .+|+|.+..... ....+.+|+.+++.++|+||+++++++. ....|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIY 76 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcE
Confidence 34568999999999999999999986554 599999875322 2346788999999999999999999875 45689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
+||||+++++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||.+.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 99999999999999986544568899999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. .......++..|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 157 ~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~ 206 (262)
T cd05071 157 Y--------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 206 (262)
T ss_pred c--------------------------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 0 01112346778999998863 458999999999999999 8889854
No 200
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.96 E-value=1.2e-28 Score=265.62 Aligned_cols=203 Identities=24% Similarity=0.323 Sum_probs=170.6
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeeccc--ccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV--MLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 747 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~--~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~ 747 (905)
.+|.+.+.||+|+||.||++.+..++..||+|.+.... .........+.+|+.+++.++|+||+++++++.+. +.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999999999999999876431 12234556788999999999999999999998764 568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
+++|||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 9999999999999998764 34889999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. .........++..|+|||.+.+ ..++|+|||||++|+|++|+.||..
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 211 (264)
T cd06653 160 CM------------------------SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAE 211 (264)
T ss_pred cc------------------------cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 00 0011123568999999999874 4589999999999999999999964
No 201
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.96 E-value=1.1e-28 Score=263.89 Aligned_cols=195 Identities=19% Similarity=0.263 Sum_probs=162.6
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 757 (905)
+.||+|+||.||+|.+..+++.+|+|.+.... .......+.+|+.+++.++||||+++++++...+..|+||||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 36899999999999999999999999876432 3445567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchh
Q 002580 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (905)
Q Consensus 758 ~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~ 837 (905)
+|.+++.... ..+++..++.++.|++.||.|||++||+|+||||+|||++.++.+||+|||++........
T Consensus 79 ~L~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------- 149 (252)
T cd05084 79 DFLTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-------- 149 (252)
T ss_pred cHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc--------
Confidence 9999987542 3588999999999999999999999999999999999999999999999999854321000
Q ss_pred hhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.........+..|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 150 -----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~ 199 (252)
T cd05084 150 -----------------ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYAN 199 (252)
T ss_pred -----------------cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 000011123467999999874 458999999999999997 9999853
No 202
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.96 E-value=1e-28 Score=266.36 Aligned_cols=202 Identities=19% Similarity=0.197 Sum_probs=169.5
Q ss_pred cCCCeeecccccccCceEEEEEEEcCC---CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
..++|++.+.||+|+||.||+|.+..+ ...+|+|.++... .......+..|+.+++.++||||+++++++...+.
T Consensus 2 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (266)
T cd05033 2 DPSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP 79 (266)
T ss_pred ChHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc
Confidence 356899999999999999999998644 4579999887542 33445678889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
.|++|||+++++|.+++.... ..++...+..++.|++.||.|||+++|+|+||||+|||++.++.++|+|||++.....
T Consensus 80 ~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 80 VMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred eEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999999997653 3589999999999999999999999999999999999999999999999999976531
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCch
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFP 899 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~ 899 (905)
.... .......+++.|+|||.+.+ ..++|+||||+++|+|++ |..||.
T Consensus 159 ~~~~-------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~ 210 (266)
T cd05033 159 SEAT-------------------------YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYW 210 (266)
T ss_pred cccc-------------------------eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCC
Confidence 1110 00112235678999999874 458999999999999997 999984
No 203
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=9.4e-29 Score=269.28 Aligned_cols=198 Identities=24% Similarity=0.382 Sum_probs=171.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||.|+||.||+|.+..++..|++|.+..... .......+.+|+.+++.++|+||+++++++......|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL-EGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc-cchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 58999999999999999999999999999999876532 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+ +++|.+++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 80 ~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 80 YM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99 999999987643 5699999999999999999999999999999999999999999999999999865431110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......++..|+|||++.+ ..++|+|||||++|+|++|.+||.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 202 (286)
T cd07832 155 -----------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFP 202 (286)
T ss_pred -----------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcC
Confidence 11123468999999999863 458999999999999999988884
No 204
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.96 E-value=6.5e-29 Score=271.67 Aligned_cols=199 Identities=24% Similarity=0.301 Sum_probs=167.8
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|++.+.||.|++|.||+|.+..+++.||+|.+..... ......+.+|+.+++.++|+||+++++++.+++..|+|
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHE--EGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccc--cCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 4689999999999999999999998999999999875421 11223466899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+. ++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 82 FEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred EecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 99996 59999887653 358999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||++.+ ..++|+||||+++|+|++|..||..
T Consensus 158 -------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~ 206 (291)
T cd07844 158 -------------------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG 206 (291)
T ss_pred -------------------------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01112346789999999863 3589999999999999999999953
No 205
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.96 E-value=9.2e-29 Score=267.99 Aligned_cols=197 Identities=28% Similarity=0.414 Sum_probs=172.9
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||.|++|.||++.+..++..+|+|.+.... .......+.+|+.+++.++|+||+++++++.++..+|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIM 78 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEE
Confidence 47899999999999999999999999999999987542 2344566789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++... .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~--- 152 (274)
T cd06609 79 EYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM--- 152 (274)
T ss_pred EeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc---
Confidence 999999999998764 58999999999999999999999999999999999999999999999999986643111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ +.++|+|||||++|+|++|..||..
T Consensus 153 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~ 200 (274)
T cd06609 153 ------------------------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSD 200 (274)
T ss_pred ------------------------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 11234568899999999874 4689999999999999999999953
No 206
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.96 E-value=8.8e-29 Score=272.56 Aligned_cols=205 Identities=22% Similarity=0.299 Sum_probs=171.0
Q ss_pred ccCCCeeecccccccCceEEEEEEEc-----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 742 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~ 742 (905)
+..++|.+.+.||+|+||.||++.+. .++..+|+|.++... .......+.+|+.+++++ +|+||+++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 109 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACT 109 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEe
Confidence 55668999999999999999999852 345689999887542 234456788999999999 7999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcc
Q 002580 743 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (905)
Q Consensus 743 ~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~ 822 (905)
..+..|++|||+.+++|.+++.......+++..+..++.|++.||.|||+++|+|+||||+|||++.++.++|+|||++.
T Consensus 110 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~ 189 (302)
T cd05055 110 IGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLAR 189 (302)
T ss_pred cCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccc
Confidence 99999999999999999999976544458999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCc
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPF 898 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF 898 (905)
........ .......+++.|+|||.+.+ ..++|+|||||++|+|++ |..||
T Consensus 190 ~~~~~~~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~ 244 (302)
T cd05055 190 DIMNDSNY-------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY 244 (302)
T ss_pred cccCCCce-------------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCc
Confidence 54311100 01122346788999999874 458999999999999998 99998
Q ss_pred hh
Q 002580 899 PI 900 (905)
Q Consensus 899 ~~ 900 (905)
..
T Consensus 245 ~~ 246 (302)
T cd05055 245 PG 246 (302)
T ss_pred CC
Confidence 53
No 207
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.96 E-value=9.9e-29 Score=270.30 Aligned_cols=199 Identities=24% Similarity=0.288 Sum_probs=166.6
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.+.+.||+|+||.||+|.+..++..|++|.+..... ......+.+|+.+++.++|+||+++++++..++..|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--EGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 3689999999999999999999999999999999875422 12233567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+. ++|..++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 82 ~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 157 (291)
T cd07870 82 FEYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-- 157 (291)
T ss_pred Eeccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC--
Confidence 99995 67777765443 347888899999999999999999999999999999999999999999999986432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 158 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~ 206 (291)
T cd07870 158 -------------------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPG 206 (291)
T ss_pred -------------------------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 01123357899999999864 3478999999999999999999963
No 208
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.96 E-value=4.7e-29 Score=267.99 Aligned_cols=199 Identities=24% Similarity=0.263 Sum_probs=171.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
..+|++.+.||.|+||.||+|.+.. +..+++|.+... .......+..|+.+++.++|+||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD---DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc---chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 3479999999999999999999977 888999998754 233455688899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+++++|.+++.......++...+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~- 159 (261)
T cd05148 81 TELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY- 159 (261)
T ss_pred EeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc-
Confidence 9999999999999876556789999999999999999999999999999999999999999999999999865431100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
......++..|+|||.+.. ..++|+||||+++|+|++ |+.||..
T Consensus 160 --------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~ 207 (261)
T cd05148 160 --------------------------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPG 207 (261)
T ss_pred --------------------------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCc
Confidence 1112345678999999873 458999999999999998 8999964
No 209
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=246.54 Aligned_cols=205 Identities=24% Similarity=0.351 Sum_probs=170.5
Q ss_pred ccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe
Q 002580 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 743 (905)
Q Consensus 665 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~ 743 (905)
.+-.+..+....+..||+|++|.|-+.++..+|...|+|.+.... +....++.++|+++..+. .+|++|++|+.+..
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r 116 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--NSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR 116 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--ChHHHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence 334555667777889999999999999999999999999998653 345567788899886664 79999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 744 KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
.+.++|.||.| ..+|..+... ..+..+++..+-+|+..++.||.|||++ .++|||+||+||||+.+|++||||||.
T Consensus 117 egdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 117 EGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999999 5678776553 2345699999999999999999999987 899999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------C-CCchHHHHHHHHHHHHh
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------Y-TRMTRYNYLILVSKKFM 893 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~-~~sDiwSlGvil~ellt 893 (905)
|-.+..+- ..+.-.|-..|||||.+.. | -++|+||||++++||.+
T Consensus 196 sG~L~dSi----------------------------Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~ 247 (282)
T KOG0984|consen 196 SGYLVDSI----------------------------AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAI 247 (282)
T ss_pred ceeehhhh----------------------------HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhh
Confidence 86543211 1122357789999999982 2 39999999999999999
Q ss_pred CCCCchh
Q 002580 894 EFQPFPI 900 (905)
Q Consensus 894 g~~PF~~ 900 (905)
+++||+.
T Consensus 248 lr~PY~~ 254 (282)
T KOG0984|consen 248 LRFPYES 254 (282)
T ss_pred ccccccc
Confidence 9999963
No 210
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.96 E-value=7.3e-29 Score=271.54 Aligned_cols=208 Identities=21% Similarity=0.321 Sum_probs=171.4
Q ss_pred cccccCCCeeecccccccCceEEEEEEEcCC-----CeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 002580 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 739 (905)
Q Consensus 666 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 739 (905)
...+..++|++.+.||+|+||.||++..... ...+|+|.+.... .......+.+|+.++..+ +|+||+++++
T Consensus 6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 83 (293)
T cd05053 6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 83 (293)
T ss_pred ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 3456678899999999999999999998644 3789999987542 233456688999999999 8999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCE
Q 002580 740 SFQTKTHVCLITDYCPGGELFLLLDRQ--------------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (905)
Q Consensus 740 ~~~~~~~~~lV~E~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NI 805 (905)
++..++.+|++|||+++++|..++... ....+++..++.++.|++.||.|||++||+||||||+||
T Consensus 84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni 163 (293)
T cd05053 84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV 163 (293)
T ss_pred EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence 999999999999999999999999652 234588999999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 806 Ll~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
|++.++.+||+|||++........ ........++..|+|||.+.+ +.++|+|
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 218 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDY-------------------------YRKTTNGRLPVKWMAPEALFDRVYTHQSDVW 218 (293)
T ss_pred EEcCCCeEEeCccccccccccccc-------------------------eeccCCCCCCccccCHHHhccCCcCccccee
Confidence 999999999999999875432110 001112234578999998763 4589999
Q ss_pred HHHHHHHHHHh-CCCCchh
Q 002580 883 NYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 883 SlGvil~ellt-g~~PF~~ 900 (905)
||||++|+|++ |..||..
T Consensus 219 slG~il~el~~~g~~p~~~ 237 (293)
T cd05053 219 SFGVLLWEIFTLGGSPYPG 237 (293)
T ss_pred ehhhHHHHHhcCCCCCCCC
Confidence 99999999997 9999853
No 211
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.96 E-value=1e-28 Score=270.42 Aligned_cols=203 Identities=21% Similarity=0.259 Sum_probs=168.8
Q ss_pred cCCCeeecccccccCceEEEEEEEc-----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~-----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
...+|.+.+.||+|+||.||+|.+. .++..+++|.+... .......+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (291)
T cd05094 3 KRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP---TLAARKDFQREAELLTNLQHEHIVKFYGVCGDG 79 (291)
T ss_pred chHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc---cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence 4567999999999999999999864 34567889987643 234446788999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC
Q 002580 745 THVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 810 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~ 810 (905)
+..++||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~ 159 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 159 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 99999999999999999997542 2347889999999999999999999999999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHH
Q 002580 811 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLIL 887 (905)
Q Consensus 811 ~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvi 887 (905)
+.++|+|||++........ ........+++.|+|||.+.+ ..++|+|||||+
T Consensus 160 ~~~~l~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 214 (291)
T cd05094 160 LLVKIGDFGMSRDVYSTDY-------------------------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 214 (291)
T ss_pred CcEEECCCCcccccCCCce-------------------------eecCCCCCcceeecChHHhccCCCCchhhHHHHHHH
Confidence 9999999999865431110 011223456789999999874 458999999999
Q ss_pred HHHHHh-CCCCchh
Q 002580 888 VSKKFM-EFQPFPI 900 (905)
Q Consensus 888 l~ellt-g~~PF~~ 900 (905)
+|+|++ |..||..
T Consensus 215 l~el~t~g~~p~~~ 228 (291)
T cd05094 215 LWEIFTYGKQPWFQ 228 (291)
T ss_pred HHHHHhCCCCCCCC
Confidence 999998 9999843
No 212
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.96 E-value=1.6e-28 Score=265.06 Aligned_cols=203 Identities=24% Similarity=0.313 Sum_probs=170.1
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHV 747 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~ 747 (905)
.+|.+.+.||+|+||.||++.+..++..|++|.+...... .......+.+|+.+++.++||||+++++++.. ...+
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4789999999999999999999999999999998754321 22345678889999999999999999998875 3678
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
++++||+++++|.+++... ..++...++.++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++......
T Consensus 82 ~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 159 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccc
Confidence 9999999999999999764 34889999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. .........++..|+|||.+.+ +.++|+|||||++|+|++|+.||..
T Consensus 160 ~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~ 211 (266)
T cd06651 160 CM------------------------SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE 211 (266)
T ss_pred cc------------------------cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence 00 0001123458899999999874 4589999999999999999999963
No 213
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.96 E-value=7.4e-29 Score=266.03 Aligned_cols=198 Identities=23% Similarity=0.319 Sum_probs=165.2
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
..+|++.+.||+|+||.||++.+. ++..+|+|.+.+... ....+.+|+.+++.++|+||+++++++...+..|+|
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV 77 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence 456899999999999999999885 566799999875432 224577899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 78 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 78 TEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred EecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 99999999999997643 3589999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......++..|+|||.+.+ ..++|+||||+++|+|++ |..||..
T Consensus 156 -------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 204 (256)
T cd05059 156 -------------------------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYER 204 (256)
T ss_pred -------------------------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCC
Confidence 00111224567999999874 458999999999999998 8999853
No 214
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=1.6e-28 Score=262.79 Aligned_cols=199 Identities=25% Similarity=0.406 Sum_probs=172.5
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||+|+||.||+|.+..++..+|+|.+..... .......+.+|+.+++.++||||+++++.+...+..++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM-TKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc-ccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 58999999999999999999999999999999876533 33446778899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-CcEEEEeccCccccCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|+++++|.+++.......+++..+..++.+++.+|.|||++||+|+||||+||+++.+ +.++|+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS--- 156 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc---
Confidence 9999999999987555568999999999999999999999999999999999999855 468999999986543110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......+++.|+|||.+.+ ..++|+||||+++|+|++|..||..
T Consensus 157 -------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 203 (256)
T cd08220 157 -------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA 203 (256)
T ss_pred -------------------------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCccc
Confidence 1123468899999999874 4589999999999999999999954
No 215
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=7.7e-29 Score=274.57 Aligned_cols=192 Identities=23% Similarity=0.337 Sum_probs=155.3
Q ss_pred ccccccCceEEEEEEEcC--CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE--eCCeEEEEEec
Q 002580 678 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVCLITDY 753 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~--t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~lV~E~ 753 (905)
..||+|+||.||+|.... ++..||+|.+.... ....+.+|+.+++.++||||+++++++. .+..+|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEee
Confidence 579999999999999754 56889999886542 1235678999999999999999999885 35678999999
Q ss_pred cCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEE----cCCCcEEEEeccCcc
Q 002580 754 CPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 822 (905)
Q Consensus 754 ~~gg~L~~~l~~~-------~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl----~~~~~vkL~DFG~s~ 822 (905)
+. ++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+++
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 82 AE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred eC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 95 5787777532 12348889999999999999999999999999999999999 456789999999997
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCc
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF 898 (905)
....... .........+|+.|+|||++.+ ..++|+|||||++|+|++|.+||
T Consensus 161 ~~~~~~~------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f 216 (317)
T cd07867 161 LFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 216 (317)
T ss_pred ccCCCcc------------------------cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCc
Confidence 6432111 0111234578999999999864 34799999999999999999999
Q ss_pred h
Q 002580 899 P 899 (905)
Q Consensus 899 ~ 899 (905)
.
T Consensus 217 ~ 217 (317)
T cd07867 217 H 217 (317)
T ss_pred c
Confidence 5
No 216
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.96 E-value=9.5e-29 Score=265.09 Aligned_cols=195 Identities=23% Similarity=0.378 Sum_probs=165.3
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHV 747 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~ 747 (905)
++..+|.+.+.||+|+||.||++.. .+..+++|.+... .....+.+|+.+++.++|+|++++++++. .++..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 75 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL 75 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCce
Confidence 4567899999999999999999987 4778999988643 23456888999999999999999999764 55679
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|++|||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred EEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999999998765556889999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.....++..|+|||++.+ ..++|+|||||++|+|++ |+.||..
T Consensus 156 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~ 202 (256)
T cd05082 156 ------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPR 202 (256)
T ss_pred ------------------------------CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 112234568999999874 458999999999999997 9999864
No 217
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.96 E-value=1.3e-28 Score=267.55 Aligned_cols=203 Identities=20% Similarity=0.268 Sum_probs=167.7
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCe----EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
+...+|++.+.||+|+||.||+|.+..++. .||+|++... ........+.+|+.++..++|+||+.+++++..
T Consensus 4 l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~- 80 (279)
T cd05109 4 LKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN--TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT- 80 (279)
T ss_pred cchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC--CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence 456789999999999999999999877765 4899988654 234445678889999999999999999998875
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...+++++|+++|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 STVQLVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCcEEEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 45789999999999999987642 45899999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
...... .......+++.|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 214 (279)
T cd05109 160 DIDETE-------------------------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDG 214 (279)
T ss_pred ccccce-------------------------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Confidence 321110 00112234678999999874 458999999999999998 9999864
No 218
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.96 E-value=7.7e-29 Score=266.09 Aligned_cols=199 Identities=20% Similarity=0.297 Sum_probs=166.7
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
+.++|++.+.||+|+||.||.+.+.. +..+|+|.+..... ....+.+|+.+++.++||||+++++++......|+
T Consensus 2 ~~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 76 (256)
T cd05113 2 DPKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYI 76 (256)
T ss_pred ChHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEE
Confidence 34679999999999999999998754 44699998875422 23567889999999999999999999998899999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
+|||+.+++|.+++..... .+++..++.++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++........
T Consensus 77 v~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~ 155 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY 155 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence 9999999999999976433 589999999999999999999999999999999999999999999999999865321100
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......++..|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 156 --------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 204 (256)
T cd05113 156 --------------------------TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYER 204 (256)
T ss_pred --------------------------eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 01112345678999999874 458999999999999998 9999864
No 219
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96 E-value=1.4e-28 Score=265.13 Aligned_cols=204 Identities=21% Similarity=0.268 Sum_probs=170.2
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccc---cCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM---LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~---~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
+|++.+.||.|+||.||+|.. .+++.+|+|.+..... ........+.+|+++++.++|+||+++++++.+.+..|+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 478889999999999999987 5788999998875421 122344668899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
+|||+++++|.+++.+. ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 157 (265)
T cd06631 80 FMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL 157 (265)
T ss_pred EEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence 99999999999999764 3488999999999999999999999999999999999999999999999999865431111
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. ..........|+..|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 158 ~~---------------------~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 210 (265)
T cd06631 158 HG---------------------THSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLAS 210 (265)
T ss_pred cc---------------------cccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCcccc
Confidence 00 00011234568999999999874 4689999999999999999999953
No 220
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.96 E-value=1.3e-28 Score=267.96 Aligned_cols=203 Identities=19% Similarity=0.274 Sum_probs=165.2
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCe----EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
+..++|++.+.||.|+||.||+|.+..++. .+++|.+... ........+..|+.++..++||||+++++++. .
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~ 80 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-G 80 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-C
Confidence 445689999999999999999999977776 4666766432 12334466778888899999999999999875 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...++++||+++++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 56789999999999999997643 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
...... .......++..|+|||.+.+ +.++|+|||||++|++++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 160 YPDDKK-------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred cCCCcc-------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 311100 01123456778999999873 458999999999999998 9999954
No 221
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.96 E-value=1.2e-28 Score=268.13 Aligned_cols=204 Identities=20% Similarity=0.254 Sum_probs=169.6
Q ss_pred ccCCCeeecccccccCceEEEEEEEc-----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
+...+|.+.++||+|+||.||++... .++..+++|.+... .......+.+|+++++.++|+||+++++++..
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTVLQHQHIVRFYGVCTE 78 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC---CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec
Confidence 44568899999999999999999753 34678999987643 34456678999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPT-------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN 810 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~-------------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~ 810 (905)
.+..|++|||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 79 GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCC
Confidence 9999999999999999999976431 347889999999999999999999999999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHH
Q 002580 811 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLIL 887 (905)
Q Consensus 811 ~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvi 887 (905)
+.+||+|||++........ ........+++.|+|||.+.+ +.++|+|||||+
T Consensus 159 ~~~kL~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 213 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDY-------------------------YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV 213 (280)
T ss_pred CCEEECCCCceeEcCCCce-------------------------eecCCCccccccccCHHHhccCCcCchhhHHHHHHH
Confidence 9999999999864321100 011123345788999998874 458999999999
Q ss_pred HHHHHh-CCCCchh
Q 002580 888 VSKKFM-EFQPFPI 900 (905)
Q Consensus 888 l~ellt-g~~PF~~ 900 (905)
+|+|++ |.+||..
T Consensus 214 l~el~~~g~~p~~~ 227 (280)
T cd05092 214 LWEIFTYGKQPWYQ 227 (280)
T ss_pred HHHHHcCCCCCCcc
Confidence 999998 9999954
No 222
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.96 E-value=1.5e-28 Score=264.49 Aligned_cols=204 Identities=25% Similarity=0.350 Sum_probs=174.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||.|+||.||+|....++..+++|++...... .....+.+|+.+++.++|+||+++++.+...+..|++|
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ--TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc--hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 4799999999999999999999889999999998754322 25677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|++++++|.+++..... ..+++..+..++.|++.||.|||++||+|+||+|+||++++++.++|+|||++.........
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~ 158 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR 158 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc
Confidence 99999999999976432 45899999999999999999999999999999999999999999999999998664422110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.........|+..|+|||++.. ..++|+|||||++|+|++|+.||..
T Consensus 159 -----------------------~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~ 209 (267)
T cd06610 159 -----------------------TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSK 209 (267)
T ss_pred -----------------------cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccc
Confidence 0012234578999999999863 4589999999999999999999964
No 223
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.96 E-value=1.3e-28 Score=265.84 Aligned_cols=204 Identities=20% Similarity=0.253 Sum_probs=169.0
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCC---eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~---~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
..++|++.+.||+|+||.||+|.+..++ ..+|+|.++... .......+..|+.+++.++||||+++++++..++.
T Consensus 2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 79 (267)
T cd05066 2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP 79 (267)
T ss_pred CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 3568999999999999999999986544 379999887542 23345678899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
.|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 80 VMIVTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred cEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999999997653 4589999999999999999999999999999999999999999999999999866432
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.... ........++..|+|||.+.+ ..++|+|||||++|++++ |..||..
T Consensus 159 ~~~~------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~ 212 (267)
T cd05066 159 DPEA------------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE 212 (267)
T ss_pred ccce------------------------eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence 1110 001112234568999999874 458999999999999886 9999853
No 224
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.96 E-value=1.1e-28 Score=265.27 Aligned_cols=200 Identities=22% Similarity=0.321 Sum_probs=167.9
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++++.||+|+||.||+|... ++..||+|.+..... ....+.+|+.+++.++|+||+++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05067 3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIY 76 (260)
T ss_pred cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcE
Confidence 45678999999999999999999874 567899999875432 2356788999999999999999999874 56789
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+.+++|.+++.......++...+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 99999999999999877655678999999999999999999999999999999999999999999999999985533110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. .......++..|+|||++.+ ..++|+||||+++|++++ |++||..
T Consensus 157 ~--------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 206 (260)
T cd05067 157 Y--------------------------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPG 206 (260)
T ss_pred c--------------------------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 0 01122345678999999873 458999999999999998 9999963
No 225
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.96 E-value=1.7e-28 Score=267.35 Aligned_cols=199 Identities=22% Similarity=0.275 Sum_probs=163.2
Q ss_pred Ce-eecccccccCceEEEEEEE----cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CC
Q 002580 673 HF-RPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KT 745 (905)
Q Consensus 673 ~y-~i~~~Lg~G~~g~V~~~~~----~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~ 745 (905)
+| ++.+.||+|+||.||++.. ..++..+|+|.+.... .......+.+|+++++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC--GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 45 9999999999999988653 3567889999987542 22345667889999999999999999998765 34
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
.+|++|||+++++|.+++... .+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 689999999999999998763 38999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
..... ........++..|+|||.+.. ..++|+||||+++|+|++|..||..
T Consensus 159 ~~~~~------------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 212 (283)
T cd05080 159 EGHEY------------------------YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQS 212 (283)
T ss_pred Ccchh------------------------hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCC
Confidence 21110 001112245667999999873 4599999999999999999999854
No 226
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=7.8e-29 Score=269.90 Aligned_cols=198 Identities=22% Similarity=0.335 Sum_probs=169.2
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++++.||.|++|.||+|.+..++..||+|.+..... .......+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc-ccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 48899999999999999999999999999998875422 22234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+. ++|..++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---- 154 (284)
T cd07860 80 FLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---- 154 (284)
T ss_pred ccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc----
Confidence 995 689998877655678999999999999999999999999999999999999999999999999986532110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|+|||++.+ ..++|+|||||++|+|+||+.||.
T Consensus 155 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~ 202 (284)
T cd07860 155 -----------------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFP 202 (284)
T ss_pred -----------------------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence 01122356889999998874 347999999999999999999994
No 227
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.96 E-value=6.3e-29 Score=270.79 Aligned_cols=198 Identities=25% Similarity=0.324 Sum_probs=169.4
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||+|.+..+++.||+|.+.+... .......+.+|+++++.++||||+++++++..++..|+||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESED-DKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccC-cchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 479999999999999999999988999999999876432 2234456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|..+.... ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--- 154 (286)
T cd07846 80 EFVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG--- 154 (286)
T ss_pred ecCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---
Confidence 999998888876543 348999999999999999999999999999999999999999999999999986532111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......++..|+|||++.+ ..++|+||||+++|+|++|++||.
T Consensus 155 ------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~ 202 (286)
T cd07846 155 ------------------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP 202 (286)
T ss_pred ------------------------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCC
Confidence 11123467899999999874 347999999999999999999995
No 228
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.96 E-value=1.3e-28 Score=267.38 Aligned_cols=205 Identities=18% Similarity=0.266 Sum_probs=168.6
Q ss_pred ccCCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
+..++|.+.+.||+|+||.||+|.+.. ++..|++|.+... ........+.+|+.+++.++|+||+++++++.+
T Consensus 3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~--~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 80 (277)
T cd05036 3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES--CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE 80 (277)
T ss_pred CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence 345689999999999999999999977 7788999987643 223344568889999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC---cEEE
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSL 815 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~---~vkL 815 (905)
.+..|+||||++|++|.+++..... ..+++..+..++.||+.||.|||+++++||||||+||+++.++ .+||
T Consensus 81 ~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 81 RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999999976432 2588999999999999999999999999999999999998655 5999
Q ss_pred EeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH
Q 002580 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF 892 (905)
Q Consensus 816 ~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell 892 (905)
+|||+++........ ........+..|+|||++.+ ..++|+|||||++|+|+
T Consensus 161 ~dfg~~~~~~~~~~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~ 215 (277)
T cd05036 161 ADFGMARDIYRASYY-------------------------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIF 215 (277)
T ss_pred ccCccccccCCccce-------------------------ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHH
Confidence 999998754211100 00112234568999999873 56999999999999999
Q ss_pred h-CCCCchh
Q 002580 893 M-EFQPFPI 900 (905)
Q Consensus 893 t-g~~PF~~ 900 (905)
+ |..||..
T Consensus 216 ~~g~~pf~~ 224 (277)
T cd05036 216 SLGYMPYPG 224 (277)
T ss_pred cCCCCCCCC
Confidence 6 9999964
No 229
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=1.7e-28 Score=262.86 Aligned_cols=199 Identities=21% Similarity=0.411 Sum_probs=172.3
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||+|+||.||++.+..+++.|++|.+..... .......+.+|+.+++.++|+||+++++++...+..|+|||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM-SPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC-ChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 58999999999999999999999999999999875422 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+.+++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 155 (256)
T cd08218 80 YCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---- 155 (256)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch----
Confidence 9999999999976554568999999999999999999999999999999999999999999999999986532110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......|++.|+|||++.+ ..++|+|||||++|+|++|..||.
T Consensus 156 -----------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~ 202 (256)
T cd08218 156 -----------------------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFE 202 (256)
T ss_pred -----------------------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCcc
Confidence 01123457889999999874 458999999999999999999985
No 230
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.96 E-value=8.9e-29 Score=269.42 Aligned_cols=205 Identities=19% Similarity=0.277 Sum_probs=168.2
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCC-----CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t-----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
++..+|.+.+.||.|+||.||+|.+..+ +..||+|.+.... .......+..|+.++..++||||+++++++..
T Consensus 2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 79 (283)
T cd05091 2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK 79 (283)
T ss_pred CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC
Confidence 3456799999999999999999987543 5789999987542 23345668889999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 809 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~ 809 (905)
....++++||+.+++|.+++.... ...++...+..++.|++.||.|||++||+||||||+|||++.
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFD 159 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecC
Confidence 999999999999999999985321 234788889999999999999999999999999999999999
Q ss_pred CCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHH
Q 002580 810 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLI 886 (905)
Q Consensus 810 ~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGv 886 (905)
++.+||+|||+++....... ........+++.|+|||.+.+ ..++|+|||||
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 214 (283)
T cd05091 160 KLNVKISDLGLFREVYAADY-------------------------YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGV 214 (283)
T ss_pred CCceEecccccccccccchh-------------------------eeeccCccCCccccCHHHHhcCCCCcchhHHHHHH
Confidence 99999999999865321110 011123346789999999863 45899999999
Q ss_pred HHHHHHh-CCCCchh
Q 002580 887 LVSKKFM-EFQPFPI 900 (905)
Q Consensus 887 il~ellt-g~~PF~~ 900 (905)
++|+|++ |..||..
T Consensus 215 ~l~el~~~g~~p~~~ 229 (283)
T cd05091 215 VLWEVFSYGLQPYCG 229 (283)
T ss_pred HHHHHHcCCCCCCCC
Confidence 9999998 8888853
No 231
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.96 E-value=1.6e-28 Score=265.55 Aligned_cols=196 Identities=20% Similarity=0.201 Sum_probs=159.3
Q ss_pred ccccccCceEEEEEEEc--CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 002580 678 KPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~--~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 755 (905)
+.||+|+||.||+|... .++..+|+|.+.... .......+.+|+.+++.++||||+++++++.+....|+||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA--SVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 36899999999999864 345679999876542 22334567889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 756 GGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 756 gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
+++|.+++.... ....+...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~--- 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY--- 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcce---
Confidence 999999987532 12456777888999999999999999999999999999999999999999999854321100
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC----------CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----------YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----------~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
........+++.|+|||++.+ ..++|+|||||++|+|++ |..||..
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 212 (269)
T cd05087 156 ----------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRH 212 (269)
T ss_pred ----------------------eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 011223467889999999863 358999999999999996 9999964
No 232
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=1.1e-28 Score=270.74 Aligned_cols=198 Identities=24% Similarity=0.338 Sum_probs=168.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
+|.+.+.||.|+||.||+|.+..+++.|++|.+...... .......+..|+++++.++|+||+++++++.+.+..|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 488899999999999999999999999999999865432 122344567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++........
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 157 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR- 157 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc-
Confidence 9999 899999997643 3589999999999999999999999999999999999999999999999999866432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+++.|+|||.+.+ ..++|+|||||++|+|++|.+||.
T Consensus 158 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~ 204 (298)
T cd07841 158 --------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLP 204 (298)
T ss_pred --------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCcccc
Confidence 1122356789999998853 358999999999999999988875
No 233
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=1.4e-28 Score=267.76 Aligned_cols=199 Identities=26% Similarity=0.367 Sum_probs=169.2
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT------ 743 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~------ 743 (905)
.+.|++.+.||.|+||.||++.+..+++.+|+|++... ......+..|+.++..+ +|+||++++++|..
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT----EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC----hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 46899999999999999999999999999999998653 23345677899999888 79999999999853
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
...+|++|||+++++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 46789999999999999999876556688999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc--------CCCCchHHHHHHHHHHHHhCC
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--------AYTRMTRYNYLILVSKKFMEF 895 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--------~~~~sDiwSlGvil~elltg~ 895 (905)
.... ........|++.|+|||.+. ...++|+|||||++|+|++|.
T Consensus 171 ~~~~---------------------------~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 171 LDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred hhcc---------------------------ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 3210 01123456899999999975 134899999999999999999
Q ss_pred CCchh
Q 002580 896 QPFPI 900 (905)
Q Consensus 896 ~PF~~ 900 (905)
.||..
T Consensus 224 ~p~~~ 228 (282)
T cd06636 224 PPLCD 228 (282)
T ss_pred CCccc
Confidence 99954
No 234
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=255.44 Aligned_cols=200 Identities=25% Similarity=0.351 Sum_probs=168.4
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 747 (905)
.+.++..++..||.|+.|.|+++..+.+|...|||.+.+. .+..+.++++..++++... ++|+||+.+++|..+..+
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV 166 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDV 166 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchH
Confidence 3455667788899999999999999999999999999875 3566778888888887665 589999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
++.||.| +-.+..++++. .+++++..+-++...++.||.||..+ ||+|||+||+|||+|..|++||||||++-.+..
T Consensus 167 ~IcMelM-s~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd 244 (391)
T KOG0983|consen 167 FICMELM-STCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD 244 (391)
T ss_pred HHHHHHH-HHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec
Confidence 9999998 44555566554 46799999999999999999999865 899999999999999999999999999855431
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
+ ...+-..|-+.|||||-+.- .-++|+||||++|+||.||.+||+.
T Consensus 245 S----------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~ 296 (391)
T KOG0983|consen 245 S----------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKG 296 (391)
T ss_pred c----------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCC
Confidence 1 11223468899999999983 2388999999999999999999975
No 235
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.96 E-value=1.4e-28 Score=265.75 Aligned_cols=197 Identities=21% Similarity=0.239 Sum_probs=157.6
Q ss_pred ccccccCceEEEEEEEcC--CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 002580 678 KPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~--t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 755 (905)
+.||+|+||.||+|.... ....+++|.+... ........+.+|+.+++.++|+||+++++++......|+||||++
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS--ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCP 78 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc--CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCC
Confidence 368999999999997533 3457888876543 233345667889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 756 GGELFLLLDRQPT---KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 756 gg~L~~~l~~~~~---~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
+++|.+++..... ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 79 LGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred CCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999999976432 2346778889999999999999999999999999999999999999999999854221100
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC----------CCCchHHHHHHHHHHHHh-CCCCchhh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----------YTRMTRYNYLILVSKKFM-EFQPFPIL 901 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----------~~~sDiwSlGvil~ellt-g~~PF~~~ 901 (905)
........+++.|+|||++.. ..++|+|||||++|+|++ |..||...
T Consensus 156 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~ 213 (269)
T cd05042 156 ----------------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDL 213 (269)
T ss_pred ----------------------eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcC
Confidence 001123346778999998741 348999999999999998 88898643
No 236
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.3e-28 Score=271.66 Aligned_cols=205 Identities=21% Similarity=0.300 Sum_probs=167.6
Q ss_pred ccCCCeeecccccccCceEEEEEEEcC-------CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 740 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~-------t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~ 740 (905)
+..++|.+.+.||+|+||.||++.+.. +...+|+|.+.... .......+..|+.+++.+ +|+||++++++
T Consensus 15 ~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (307)
T cd05098 15 VPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGA 92 (307)
T ss_pred eehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEE
Confidence 445789999999999999999998643 23579999987542 233456788899999999 79999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEE
Q 002580 741 FQTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 806 (905)
Q Consensus 741 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NIL 806 (905)
+...+..|+||||+++++|.+++..... ..++...++.++.|++.||.|||++|++||||||+|||
T Consensus 93 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nil 172 (307)
T cd05098 93 CTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL 172 (307)
T ss_pred EecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheE
Confidence 9999999999999999999999976421 24788899999999999999999999999999999999
Q ss_pred EcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHH
Q 002580 807 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYN 883 (905)
Q Consensus 807 l~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwS 883 (905)
++.++.+||+|||++........ ........+++.|+|||++.+ ..++|+||
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws 227 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 227 (307)
T ss_pred EcCCCcEEECCCcccccccccch-------------------------hhccccCCCccceeChHHhccCCCCcHHHHHH
Confidence 99999999999999865321100 001112234578999999874 45899999
Q ss_pred HHHHHHHHHh-CCCCchh
Q 002580 884 YLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 884 lGvil~ellt-g~~PF~~ 900 (905)
|||++|+|++ |..||..
T Consensus 228 lG~~l~el~~~g~~p~~~ 245 (307)
T cd05098 228 FGVLLWEIFTLGGSPYPG 245 (307)
T ss_pred HHHHHHHHHcCCCCCCCc
Confidence 9999999998 8888853
No 237
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=1.8e-28 Score=266.74 Aligned_cols=198 Identities=25% Similarity=0.355 Sum_probs=163.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHH-HHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
++|++.+.||+|+||.||++.+..+|..||+|.++.... .. ....+..|+.+ ++.++||||+++++++..++.+|++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVN-SQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCC-cH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 479999999999999999999999999999999876532 22 23345556654 5667999999999999999999999
Q ss_pred EeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 751 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|||++ ++|.+++... ....+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 99995 6888877642 234689999999999999999999998 9999999999999999999999999998653210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......++..|+|||.+.+ ..++|+|||||++|+|++|+.||..
T Consensus 158 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (283)
T cd06617 158 ----------------------------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS 209 (283)
T ss_pred ----------------------------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence 01122457889999998853 4589999999999999999999953
No 238
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=1.4e-28 Score=265.34 Aligned_cols=203 Identities=20% Similarity=0.293 Sum_probs=170.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
+|+..+.||+|++|.||++.+..++..+|+|.+....... ......+.+|+.+++.++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4788899999999999999999999999999987543211 2245678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC-cEEEEeccCccccCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~-~vkL~DFG~s~~~~~~~ 828 (905)
||||+++++|.+++.+. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++ .++|+|||++.......
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999999764 3589999999999999999999999999999999999998776 69999999986543210
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. .........++..|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 159 ~~-----------------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 210 (268)
T cd06630 159 TG-----------------------AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNA 210 (268)
T ss_pred cc-----------------------CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 00 0011223568999999999863 4589999999999999999999953
No 239
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96 E-value=1.8e-28 Score=268.69 Aligned_cols=204 Identities=22% Similarity=0.318 Sum_probs=170.0
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCC----------------eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSG----------------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF 733 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~----------------~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~n 733 (905)
..++|++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++|||
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~~~~ 80 (296)
T cd05051 3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA--SDNAREDFLKEVKILSRLSDPN 80 (296)
T ss_pred chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhcCCCC
Confidence 4568999999999999999999876543 568999987542 2345677889999999999999
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCC
Q 002580 734 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQP---------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (905)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~N 804 (905)
|+++++++..++..+++|||+.+++|.+++.... ...+++..++.++.|++.||.|||++||+|+||||+|
T Consensus 81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N 160 (296)
T cd05051 81 IARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN 160 (296)
T ss_pred EeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc
Confidence 9999999999999999999999999999997643 1258999999999999999999999999999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchH
Q 002580 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTR 881 (905)
Q Consensus 805 ILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDi 881 (905)
|+++.++.++|+|||++........ ........+++.|+|||.+.+ ..++|+
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-------------------------YRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-------------------------eeecCcCCCCceecCHHHhhcCCCCccchh
Confidence 9999999999999999865321110 011223456789999999874 569999
Q ss_pred HHHHHHHHHHHh--CCCCchh
Q 002580 882 YNYLILVSKKFM--EFQPFPI 900 (905)
Q Consensus 882 wSlGvil~ellt--g~~PF~~ 900 (905)
|||||++|+|++ +..||..
T Consensus 216 ~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCC
Confidence 999999999998 6778753
No 240
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.96 E-value=1.3e-28 Score=264.62 Aligned_cols=200 Identities=24% Similarity=0.336 Sum_probs=166.5
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++.+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.++++++|+||+++++++. ....|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~ 76 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM----SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY 76 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC----CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence 45568999999999999999999875 556799999876432 2346889999999999999999999875 45689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+++++|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 99999999999999987555568999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. .......++..|+|||.+.+ ..++|+||||+++|+|++ |..||..
T Consensus 157 ~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~ 206 (260)
T cd05070 157 Y--------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred c--------------------------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCC
Confidence 0 01112345678999999864 458999999999999999 8999954
No 241
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.96 E-value=2e-28 Score=267.62 Aligned_cols=206 Identities=16% Similarity=0.170 Sum_probs=167.1
Q ss_pred cccCCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 742 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 742 (905)
.+..++|++.+.||+|+||.||+|.... .+..||+|.+.... .......+.+|+.+++.++|+||+++++++.
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~ 79 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVS 79 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence 3566789999999999999999997642 35589999876442 2233456778999999999999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEE
Q 002580 743 TKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 814 (905)
Q Consensus 743 ~~~~~~lV~E~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vk 814 (905)
..+..|+||||+++++|.+++.... ...++...+..++.||+.||.|||+++|+||||||+||+++.++.++
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 80 KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEE
Confidence 9999999999999999999997532 12346678889999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHH
Q 002580 815 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKK 891 (905)
Q Consensus 815 L~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~el 891 (905)
|+|||+++....... ........++..|+|||.+.+ +.++|+|||||++|+|
T Consensus 160 L~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el 214 (288)
T cd05061 160 IGDFGMTRDIYETDY-------------------------YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 214 (288)
T ss_pred ECcCCcccccccccc-------------------------ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence 999999865321110 001112345678999999874 5589999999999999
Q ss_pred Hh-CCCCchh
Q 002580 892 FM-EFQPFPI 900 (905)
Q Consensus 892 lt-g~~PF~~ 900 (905)
++ |..||..
T Consensus 215 ~~~~~~p~~~ 224 (288)
T cd05061 215 TSLAEQPYQG 224 (288)
T ss_pred HhCCCCCCCC
Confidence 98 7889853
No 242
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.96 E-value=1.7e-28 Score=279.98 Aligned_cols=207 Identities=23% Similarity=0.280 Sum_probs=169.6
Q ss_pred ccccCCCeeecccccccCceEEEEEEEc-----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEE
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYAS 740 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~-----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~ 740 (905)
..+..++|.+.+.||+|+||.||+|.+. .++..||+|+++... .......+..|+.+|..+. ||||++++++
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~E~~~l~~l~~H~niv~~~~~ 109 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA--RSSEKQALMSELKIMSHLGPHLNIVNLLGA 109 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC--ChhHHHHHHHHHHHHHhcCCCCCeEEEEEE
Confidence 3455678999999999999999999864 345789999997542 2333457889999999997 9999999999
Q ss_pred EEeCCeEEEEEeccCCCCHHHHHhhCCC----------------------------------------------------
Q 002580 741 FQTKTHVCLITDYCPGGELFLLLDRQPT---------------------------------------------------- 768 (905)
Q Consensus 741 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~---------------------------------------------------- 768 (905)
+...+.+|+|||||++|+|.+++.....
T Consensus 110 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (401)
T cd05107 110 CTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADY 189 (401)
T ss_pred EccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCc
Confidence 9999999999999999999999975321
Q ss_pred --------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCC
Q 002580 769 --------------------------------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (905)
Q Consensus 769 --------------------------------------------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~N 804 (905)
..++...+..++.||+.||.|||+++|+||||||+|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~N 269 (401)
T cd05107 190 VPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARN 269 (401)
T ss_pred cchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcce
Confidence 235667788899999999999999999999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchH
Q 002580 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTR 881 (905)
Q Consensus 805 ILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDi 881 (905)
||++.++.+||+|||+++........ .......+++.|+|||.+.+ ..++|+
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 324 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNY-------------------------ISKGSTFLPLKWMAPESIFNNLYTTLSDV 324 (401)
T ss_pred EEEeCCCEEEEEecCcceeccccccc-------------------------ccCCCcCCCCceeChHHhcCCCCCcHhHH
Confidence 99999999999999998653211110 01123457889999999874 458999
Q ss_pred HHHHHHHHHHHh-CCCCchh
Q 002580 882 YNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 882 wSlGvil~ellt-g~~PF~~ 900 (905)
|||||++|+|++ |..||..
T Consensus 325 wslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 325 WSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCC
Confidence 999999999998 8999854
No 243
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=2e-28 Score=266.42 Aligned_cols=192 Identities=32% Similarity=0.510 Sum_probs=158.6
Q ss_pred cccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHH---HHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 002580 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE---ILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~---il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 755 (905)
.||+|+||.||++.+..+++.||+|.+.+...........+..|.. ++....||||+.+++++...+..|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4799999999999999999999999987654332222222333433 3444689999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcc
Q 002580 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (905)
Q Consensus 756 gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~ 835 (905)
|++|..++... ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~-------- 150 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-------- 150 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--------
Confidence 99999988764 45999999999999999999999999999999999999999999999999998543210
Q ss_pred hhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
......|+..|+|||.+.. ..++|+||+||++|+|++|+.||...
T Consensus 151 ---------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 151 ---------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred ---------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 1123468999999999862 35899999999999999999999643
No 244
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=268.72 Aligned_cols=208 Identities=26% Similarity=0.388 Sum_probs=176.2
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeeccccc----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCC
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML----NRNKVHRACAEREILDMLDHPFVPALYASFQ-TKT 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~----~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~ 745 (905)
.++|-++..||+|+|+.||++.+....+.||||+-...... ..+..+...+|..|-+.|+||.||++|++|. +.+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 46899999999999999999999999999999986543211 2233456779999999999999999999997 557
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeCCCCCCCEEEc---CCCcEEEEeccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ---GNGHVSLTDFDL 820 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~g--IvHrDLKp~NILl~---~~~~vkL~DFG~ 820 (905)
.+|-|+|||+|.+|.-||+.+ +.+++.+++.|+.||+.||.||.... |||=||||.|||+- .-|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 899999999999999999886 45999999999999999999999874 99999999999994 347899999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc-C------CCCchHHHHHHHHHHHHh
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF-A------YTRMTRYNYLILVSKKFM 893 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~-~------~~~sDiwSlGvil~ellt 893 (905)
+++....+... ...+..+..+.||.+|++||.+. + +.+.|+||.|||+|..++
T Consensus 620 SKIMdddSy~~--------------------vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY 679 (775)
T KOG1151|consen 620 SKIMDDDSYNS--------------------VDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY 679 (775)
T ss_pred hhhccCCccCc--------------------ccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc
Confidence 98876443211 12344566789999999999998 2 459999999999999999
Q ss_pred CCCCchh
Q 002580 894 EFQPFPI 900 (905)
Q Consensus 894 g~~PF~~ 900 (905)
|+.||..
T Consensus 680 GrKPFGh 686 (775)
T KOG1151|consen 680 GRKPFGH 686 (775)
T ss_pred cCCCCCC
Confidence 9999974
No 245
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=1.8e-28 Score=264.98 Aligned_cols=199 Identities=28% Similarity=0.395 Sum_probs=169.6
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC----
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT---- 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~---- 745 (905)
.++|++.+.||.|++|.||+|.+..+++.+++|++.... .....+.+|+.+++++ .|+||+++++++....
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE----DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc----hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 468999999999999999999999899999999987542 2346788999999998 7999999999997644
Q ss_pred --eEEEEEeccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 746 --HVCLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 746 --~~~lV~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
.+|+||||+++++|.+++.... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999999999987533 456899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHh
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFM 893 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~ellt 893 (905)
...... ........|++.|+|||++.. ..++|+|||||+||+|++
T Consensus 161 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~ 213 (275)
T cd06608 161 AQLDST---------------------------LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD 213 (275)
T ss_pred eecccc---------------------------hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh
Confidence 653211 011223468999999998752 347999999999999999
Q ss_pred CCCCchh
Q 002580 894 EFQPFPI 900 (905)
Q Consensus 894 g~~PF~~ 900 (905)
|+.||..
T Consensus 214 g~~p~~~ 220 (275)
T cd06608 214 GKPPLCD 220 (275)
T ss_pred CCCCccc
Confidence 9999964
No 246
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1.4e-28 Score=268.27 Aligned_cols=198 Identities=24% Similarity=0.413 Sum_probs=172.2
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
..++|++++.||+|+||.||++.+..++..||+|++.... .......+.+|+++++.++||||+++++++...+.+|+
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 80 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM 80 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence 4568999999999999999999999999999999887542 23445678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
||||+++++|.+++... +.++...+..++.+++.||.|||+ .+++|+||||+||+++.++.++|+|||++......
T Consensus 81 v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 81 CMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred EEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 99999999999998764 458999999999999999999997 69999999999999999999999999987542100
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+|+..|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 158 ----------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~ 204 (284)
T cd06620 158 ----------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAF 204 (284)
T ss_pred ----------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence 0123468999999999863 4589999999999999999999964
No 247
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.96 E-value=2.2e-28 Score=268.60 Aligned_cols=199 Identities=21% Similarity=0.252 Sum_probs=164.3
Q ss_pred CCeeecccccccCceEEEEEEEcCCCe--EEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 748 (905)
++|++.+.||+|+||.||+|.+..++. .+++|.++.. ........+.+|+.++.++ +||||+++++++...+.+|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF--ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc--CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 579999999999999999999877764 4688877632 2334456788999999999 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEE
Q 002580 749 LITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 814 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vk 814 (905)
++|||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+|
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEE
Confidence 9999999999999997532 12478899999999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHH
Q 002580 815 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKK 891 (905)
Q Consensus 815 L~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~el 891 (905)
|+|||++...... ........+..|+|||.+.+ ..++|+|||||++|+|
T Consensus 160 l~dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el 211 (297)
T cd05089 160 IADFGLSRGEEVY----------------------------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI 211 (297)
T ss_pred ECCcCCCccccce----------------------------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence 9999998431100 00111123457999999874 4589999999999999
Q ss_pred Hh-CCCCchh
Q 002580 892 FM-EFQPFPI 900 (905)
Q Consensus 892 lt-g~~PF~~ 900 (905)
++ |..||..
T Consensus 212 ~t~g~~pf~~ 221 (297)
T cd05089 212 VSLGGTPYCG 221 (297)
T ss_pred HcCCCCCCCC
Confidence 97 9999953
No 248
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.96 E-value=2.2e-28 Score=261.73 Aligned_cols=196 Identities=25% Similarity=0.375 Sum_probs=171.6
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||.|+||.||++.+..++..+++|.+.... ....+.+|+++++.++|+||+++++++......|+++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 58999999999999999999998889999999986531 2577889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+++++|.+++.... ..+++..+..++.|++.||.|||+.+|+|+||+|+||+++.++.++|+|||++.......
T Consensus 78 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~--- 153 (256)
T cd06612 78 EYCGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM--- 153 (256)
T ss_pred ecCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc---
Confidence 9999999999987543 458999999999999999999999999999999999999999999999999986543111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......++..|+|||++.+ +.++|+||||+++|+|++|+.||..
T Consensus 154 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~ 201 (256)
T cd06612 154 ------------------------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSD 201 (256)
T ss_pred ------------------------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 01123457889999999874 4589999999999999999999864
No 249
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.96 E-value=2.3e-28 Score=264.21 Aligned_cols=205 Identities=19% Similarity=0.229 Sum_probs=168.9
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCe---EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~---~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.+.|++.+.||+|+||.||+|.+..++. .||+|.+... ........+..|+.+++.++||||+++++++..++..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG--YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 4579999999999999999999876654 6999998754 2344567889999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
++||||+++++|.+++.... ..++...++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 81 MIITEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEEEecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999999987643 45899999999999999999999999999999999999999999999999998654321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.... ..........+..|+|||.+.+ ..++|+|||||++|++++ |..||..
T Consensus 160 ~~~~----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~ 214 (269)
T cd05065 160 TSDP----------------------TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 214 (269)
T ss_pred cccc----------------------ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCC
Confidence 1100 0000111122467999999874 458999999999999886 9999843
No 250
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.96 E-value=2.8e-28 Score=261.74 Aligned_cols=194 Identities=20% Similarity=0.276 Sum_probs=160.3
Q ss_pred cccccCceEEEEEEE--cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 679 PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~--~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
.||+|+||.||+|.+ ..++..+|+|+++... ........+..|+.+++.++|+||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 689999999999964 4568899999987542 23445677889999999999999999999875 4567999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|.+++... ..+++..+..++.|++.||.|||++||+||||||.||+++.++.+||+|||++.........
T Consensus 80 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~------ 151 (257)
T cd05116 80 GPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY------ 151 (257)
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCe------
Confidence 9999999764 35899999999999999999999999999999999999999999999999998654322110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
........+++.|+|||.+.. ..++|+|||||++|+|++ |..||..
T Consensus 152 ------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 201 (257)
T cd05116 152 ------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKG 201 (257)
T ss_pred ------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 001112245679999998873 448999999999999997 9999964
No 251
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.96 E-value=1.7e-28 Score=275.37 Aligned_cols=205 Identities=23% Similarity=0.337 Sum_probs=165.9
Q ss_pred ccCCCeeecccccccCceEEEEEEE-----cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ 742 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~-----~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~ 742 (905)
+..++|++.+.||+|+||.||+|.+ ..+++.||+|.++... .......+.+|+.++..+ +|+||+++++++.
T Consensus 4 ~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~ 81 (343)
T cd05103 4 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACT 81 (343)
T ss_pred cchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC--ChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence 5567899999999999999999985 3467899999987542 233456788999999999 6899999999876
Q ss_pred e-CCeEEEEEeccCCCCHHHHHhhCC------------------------------------------------------
Q 002580 743 T-KTHVCLITDYCPGGELFLLLDRQP------------------------------------------------------ 767 (905)
Q Consensus 743 ~-~~~~~lV~E~~~gg~L~~~l~~~~------------------------------------------------------ 767 (905)
. +..++++||||++|+|.+++....
T Consensus 82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 4 457899999999999999986531
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 768 -----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 768 -----------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------ 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------ 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch------
Confidence 123677888899999999999999999999999999999999999999999998653211110
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+||||+++|+|++ |..||..
T Consensus 236 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 284 (343)
T cd05103 236 -------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 284 (343)
T ss_pred -------------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 01112345678999999864 458999999999999996 9999854
No 252
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.96 E-value=1.8e-28 Score=269.02 Aligned_cols=204 Identities=22% Similarity=0.326 Sum_probs=167.1
Q ss_pred cCCCeeecccccccCceEEEEEEEcCC--------------CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcc
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGS--------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVP 735 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t--------------~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv 735 (905)
..++|++.+.||+|+||.||+|.+..+ ...||+|.+.... .......+.+|+++++.++|+||+
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~ 80 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNII 80 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcC
Confidence 456899999999999999999987543 2358999987542 344556788999999999999999
Q ss_pred eEEEEEEeCCeEEEEEeccCCCCHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCE
Q 002580 736 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP----------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (905)
Q Consensus 736 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~----------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NI 805 (905)
++++++...+..|+||||+.+++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni 160 (295)
T cd05097 81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC 160 (295)
T ss_pred eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence 99999999999999999999999999986532 12367888999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 806 Ll~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
+++.++.+||+|||++........ ........+++.|+|||++.+ +.++|+|
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvw 215 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY-------------------------YRIQGRAVLPIRWMAWESILLGKFTTASDVW 215 (295)
T ss_pred EEcCCCcEEecccccccccccCcc-------------------------eeccCcCcCceeecChhhhccCCcCchhhHH
Confidence 999999999999999865321100 011122345778999999873 5699999
Q ss_pred HHHHHHHHHHh--CCCCchh
Q 002580 883 NYLILVSKKFM--EFQPFPI 900 (905)
Q Consensus 883 SlGvil~ellt--g~~PF~~ 900 (905)
||||++|+|++ |..||..
T Consensus 216 SlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 216 AFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred HHHHHHHHHHHcCCCCCCcc
Confidence 99999999998 6778864
No 253
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.1e-28 Score=289.84 Aligned_cols=200 Identities=20% Similarity=0.233 Sum_probs=155.9
Q ss_pred CCCeeecccccccCceEEEEEEEcCCC-eEEEEE--------------EeecccccCHHHHHHHHHHHHHHHhCCCCCcc
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMK--------------AMDKGVMLNRNKVHRACAEREILDMLDHPFVP 735 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~-~~vavK--------------~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv 735 (905)
.++|++++.||+|+||.||+|...... ...+.| .+.+...........+.+|+.+|+.++|+||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 578999999999999999998764332 222222 11111112223455678999999999999999
Q ss_pred eEEEEEEeCCeEEEEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCc
Q 002580 736 ALYASFQTKTHVCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (905)
Q Consensus 736 ~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~ 812 (905)
++++++...+..|++++++ +++|..++.... ........+..|+.||+.||.|||++||+||||||+|||++.++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 227 KIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred cEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCC
Confidence 9999999999999999999 567877765421 122345678889999999999999999999999999999999999
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHH
Q 002580 813 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVS 889 (905)
Q Consensus 813 vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ 889 (905)
+||+|||++....... .......+||+.|+|||++.+ ..++|+|||||+||
T Consensus 306 vkL~DFGla~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 306 IVLGDFGTAMPFEKER--------------------------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred EEEEeCCCceecCccc--------------------------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 9999999996543111 011234679999999999984 35899999999999
Q ss_pred HHHhCCCC
Q 002580 890 KKFMEFQP 897 (905)
Q Consensus 890 elltg~~P 897 (905)
+|++|.+|
T Consensus 360 ell~~~~~ 367 (501)
T PHA03210 360 DMLSHDFC 367 (501)
T ss_pred HHHHCCCC
Confidence 99998754
No 254
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=1.5e-28 Score=269.22 Aligned_cols=199 Identities=19% Similarity=0.257 Sum_probs=169.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 748 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~ 748 (905)
.++|++.+.||.|+||.||+|.+..+++.+++|.++..... ......+.+|+.++..++||||+++++++... +..|
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 45899999999999999999999999999999999755322 22334567899999999999999999998877 8999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
+||||+. ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......
T Consensus 83 lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 83 MVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred EEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 9999996 59998887643 358999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|+|||.+.+ ..++|+||||+++|+|++|.+||.
T Consensus 161 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~ 208 (293)
T cd07843 161 ---------------------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFP 208 (293)
T ss_pred ---------------------------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCC
Confidence 01123457889999999864 458999999999999999999995
No 255
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=2.5e-28 Score=262.65 Aligned_cols=192 Identities=37% Similarity=0.629 Sum_probs=168.0
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||.|++|.||+|.+..++..|++|++.+...........+.+|+.+++.++||||+++++++.++...|++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 68999999999999988999999999876544445567889999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 002580 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (905)
Q Consensus 760 ~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~ 839 (905)
.+++.+. ..++...+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------
Confidence 9999764 348999999999999999999999999999999999999999999999999986543110
Q ss_pred ccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
......+++.|+|||.+.. ..++|+||||+++|+|++|..||...
T Consensus 148 -----------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 195 (262)
T cd05572 148 -----------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGED 195 (262)
T ss_pred -----------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCC
Confidence 1123468899999999863 45899999999999999999999643
No 256
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.96 E-value=2.3e-28 Score=262.60 Aligned_cols=201 Identities=23% Similarity=0.317 Sum_probs=170.3
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|.+.+.||.|+||.||++.+. .+..+|+|.+..... ....+..|+.+++.++|+||+++++++......+
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence 56789999999999999999999975 457799999875422 3456888999999999999999999999889999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+++++|.+++.......++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 99999999999999987655568999999999999999999999999999999999999999999999999986543110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
........++..|+|||.+.+ ..++|+|||||++|++++ |+.||..
T Consensus 158 --------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 207 (261)
T cd05034 158 --------------------------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPG 207 (261)
T ss_pred --------------------------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCC
Confidence 000112234568999999874 458999999999999998 9999954
No 257
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=2.6e-28 Score=268.93 Aligned_cols=205 Identities=21% Similarity=0.306 Sum_probs=168.5
Q ss_pred cccCCCeeecccccccCceEEEEEEEc-------CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 739 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-------~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 739 (905)
.+..++|.+.+.||+|+||.||+|... ..+..+|+|.+... ........+.+|+.+++.+ +||||+++++
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~ 88 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMMKMIGKHKNIINLLG 88 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc--cchHHHHHHHHHHHHHHhhccCCCchheeE
Confidence 355678999999999999999999753 23457999988643 1234456788999999999 8999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCE
Q 002580 740 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (905)
Q Consensus 740 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NI 805 (905)
++......|++|||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 168 (304)
T cd05101 89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV 168 (304)
T ss_pred EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence 9999999999999999999999997642 13477888999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 806 Ll~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
+++.++.+||+|||+++........ .......+++.|+|||++.+ ..++|+|
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 223 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYY-------------------------KKTTNGRLPVKWMAPEALFDRVYTHQSDVW 223 (304)
T ss_pred EEcCCCcEEECCCccceeccccccc-------------------------ccccCCCCCceeeCchhhccCCCCchhhHH
Confidence 9999999999999998654311110 01122345678999999874 4589999
Q ss_pred HHHHHHHHHHh-CCCCch
Q 002580 883 NYLILVSKKFM-EFQPFP 899 (905)
Q Consensus 883 SlGvil~ellt-g~~PF~ 899 (905)
|||+++|+|++ |..||.
T Consensus 224 slG~~l~el~~~g~~p~~ 241 (304)
T cd05101 224 SFGVLMWEIFTLGGSPYP 241 (304)
T ss_pred HHHHHHHHHHcCCCCCcc
Confidence 99999999998 788885
No 258
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.96 E-value=2.4e-28 Score=266.36 Aligned_cols=200 Identities=26% Similarity=0.328 Sum_probs=167.0
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEE-----e
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQ-----T 743 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~-----~ 743 (905)
..++|++.+.||+|+||.||+|.+..+++.+|+|++.... .....+..|+.+++.+ +|+||+++++++. .
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 91 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH----DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN 91 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc----chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence 4578999999999999999999999999999999876431 1234567899999998 7999999999874 4
Q ss_pred CCeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
++.+|+||||+++++|.+++... ....+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~ 171 (286)
T cd06638 92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS 171 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence 46799999999999999987632 2345888999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHh
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFM 893 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~ellt 893 (905)
....... .......|++.|+|||++.. ..++|+|||||++|+|++
T Consensus 172 ~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~ 224 (286)
T cd06638 172 AQLTSTR---------------------------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD 224 (286)
T ss_pred eecccCC---------------------------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc
Confidence 6532110 01123468999999998752 348999999999999999
Q ss_pred CCCCchh
Q 002580 894 EFQPFPI 900 (905)
Q Consensus 894 g~~PF~~ 900 (905)
|..||..
T Consensus 225 g~~p~~~ 231 (286)
T cd06638 225 GDPPLAD 231 (286)
T ss_pred CCCCCCC
Confidence 9999854
No 259
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.96 E-value=3.1e-28 Score=263.14 Aligned_cols=201 Identities=21% Similarity=0.243 Sum_probs=163.9
Q ss_pred eeecccccccCceEEEEEEEcCC---CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 746 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---- 746 (905)
|.+.+.||+|+||.||.|....+ +..||+|.++... ........+..|+.+++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDI-HTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 56788999999999999987643 4789999987542 234456778999999999999999999998865443
Q ss_pred --EEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 747 --VCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 747 --~~lV~E~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
.+++|||+++++|..++... ....+++..+..++.|++.||.|||+++|+||||||+||++++++.+||+|||+
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 159 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGL 159 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccc
Confidence 79999999999999988543 223589999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCC
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQ 896 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~ 896 (905)
++........ .......++..|+|||.+.+ ..++|+|||||++|+|++ |..
T Consensus 160 ~~~~~~~~~~-------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~ 214 (273)
T cd05035 160 SKKIYSGDYY-------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214 (273)
T ss_pred eeeccccccc-------------------------cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCC
Confidence 8654311110 01112234678999999863 458999999999999999 899
Q ss_pred Cchh
Q 002580 897 PFPI 900 (905)
Q Consensus 897 PF~~ 900 (905)
||..
T Consensus 215 p~~~ 218 (273)
T cd05035 215 PYPG 218 (273)
T ss_pred CCCC
Confidence 9854
No 260
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.96 E-value=3.2e-28 Score=264.61 Aligned_cols=203 Identities=22% Similarity=0.284 Sum_probs=168.8
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCe----EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
+...+|++.+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+++.++|+||+++++++..
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 80 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET--SPKANKEILDEAYVMASVDHPHVVRLLGICLS- 80 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 345789999999999999999999876654 58999876542 24455678899999999999999999999887
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 78999999999999999997653 34899999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
...... .......++..|+|||.+.. ..++|+|||||++|++++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 214 (279)
T cd05057 160 DVDEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214 (279)
T ss_pred cCcccc-------------------------eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCC
Confidence 311110 00111224578999998863 458999999999999998 9999864
No 261
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=2.8e-28 Score=267.15 Aligned_cols=199 Identities=20% Similarity=0.274 Sum_probs=167.3
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||.|++|.||++.+..+++.||+|.+..... .......+.+|+.+++.++|+||+++++++.+.+..|+||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQE-DEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccc-cccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999865422 2233456778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-CCcEEEEeccCccccCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-~~~vkL~DFG~s~~~~~~~~~ 830 (905)
||++ ++|.+++.......+++..+..++.||+.||.|||++||+|+||+|+||+++. ++.+||+|||++.......
T Consensus 81 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-- 157 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-- 157 (294)
T ss_pred eccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc--
Confidence 9995 68888887655555788899999999999999999999999999999999985 5679999999986533110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|+|||.+.+ ..++|+|||||++|+|++|.+||.
T Consensus 158 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~ 205 (294)
T PLN00009 158 -------------------------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFP 205 (294)
T ss_pred -------------------------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 01123357889999998863 358999999999999999999995
No 262
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=3.8e-28 Score=268.04 Aligned_cols=195 Identities=26% Similarity=0.357 Sum_probs=168.6
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
..|.+.+.||+|+||.||++.+..+++.||+|.+.............+.+|+.+++.++||||++++++|.+.+..|+||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 46999999999999999999999899999999987554444455667889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+. ++|.+++.... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~----- 167 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSP----- 167 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCC-----
Confidence 9996 67777765432 3589999999999999999999999999999999999999999999999999854321
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCcccccccccc------CCCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF------AYTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~------~~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.....+++.|+|||++. ...++|+||||+++|+|++|..||.
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~ 215 (307)
T cd06607 168 --------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF 215 (307)
T ss_pred --------------------------CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCC
Confidence 12346788999999874 2458999999999999999999985
No 263
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=3.2e-28 Score=260.59 Aligned_cols=198 Identities=25% Similarity=0.365 Sum_probs=170.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
+|+..+.||+|++|.||+|.+..++..|++|.+..... ........+.+|+.+++.++|+||+++++++.....+|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 47778899999999999999988999999999875422 1234556788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
+||+++++|.+++.+. ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~-- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS-- 156 (258)
T ss_pred EEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--
Confidence 9999999999999765 348899999999999999999999999999999999999999999999999986532110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......+++.|+|||.+.. ..++|+|||||++|+|++|+.||..
T Consensus 157 --------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~ 204 (258)
T cd06632 157 --------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQ 204 (258)
T ss_pred --------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence 1224568899999999863 3489999999999999999999954
No 264
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.96 E-value=1.9e-28 Score=267.15 Aligned_cols=199 Identities=25% Similarity=0.358 Sum_probs=169.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||+|+||.||+|.+..+++.|++|.++... ........+.+|+++++.++|+||+++++++..++..|++|
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE-DDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc-ccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 47999999999999999999999999999999987542 23334567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++++.+..+.... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++........
T Consensus 80 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 80 EYVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred ecCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 999887676655443 3489999999999999999999999999999999999999999999999999865431111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......++..|+|||++.+. .++|+||||+++|+|++|.+||.
T Consensus 156 ------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~ 203 (288)
T cd07833 156 ------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFP 203 (288)
T ss_pred ------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCC
Confidence 012245688999999998743 58999999999999999999986
No 265
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=1.9e-28 Score=271.09 Aligned_cols=203 Identities=22% Similarity=0.305 Sum_probs=168.1
Q ss_pred CeeecccccccCceEEEEEEEcC--CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCG--SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVC 748 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~--t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~ 748 (905)
+|.+.+.||+|+||.||+|.+.. ++..||+|.+.............+.+|+.+++.++||||+++++++.+. ..+|
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 48899999999999999999988 8999999999874322233345677899999999999999999999988 8899
Q ss_pred EEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC----CCcEEEEeccCc
Q 002580 749 LITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG----NGHVSLTDFDLS 821 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~----~~~vkL~DFG~s 821 (905)
+||||++ ++|.+++.... ...+++..+..++.||+.||.|||+++|+||||||+|||++. ++.+||+|||++
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999995 57777765322 236899999999999999999999999999999999999998 899999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~P 897 (905)
........ ........++++.|+|||++.+ ..++|+|||||++|+|++|++|
T Consensus 160 ~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~ 215 (316)
T cd07842 160 RLFNAPLK------------------------PLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPI 215 (316)
T ss_pred cccCCCcc------------------------cccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCC
Confidence 75432111 0111234578899999998764 3589999999999999999999
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 216 ~~~ 218 (316)
T cd07842 216 FKG 218 (316)
T ss_pred CcC
Confidence 964
No 266
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=5e-28 Score=260.20 Aligned_cols=202 Identities=25% Similarity=0.436 Sum_probs=173.8
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|.+.+.||+|+||.||++.+..+++.|++|.++.... .......+..|+.+++.++|+||+++++++...+.+++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN-DPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc-chHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 58899999999999999999988999999999986533 24567788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 80 YCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred cCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999999999764 347889999999999999999999999999999999999999999999999986643221100
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........+++.|+|||++.+ ..++|+||||+++|++++|..||..
T Consensus 157 ----------------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~ 208 (264)
T cd06626 157 ----------------------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSE 208 (264)
T ss_pred ----------------------cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccC
Confidence 000123568899999999873 3489999999999999999999964
No 267
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=2.2e-28 Score=275.49 Aligned_cols=195 Identities=23% Similarity=0.389 Sum_probs=166.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
.++|++.+.||+|+||.||+|.+..+++.||+|.+.+.. ........+.+|+.+++.++|+||++++++|...
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPF-QNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccc-cChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 578999999999999999999999999999999986542 2334455677899999999999999999988643
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...|+||||+. ++|.+.+... ++...+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 168 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 168 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeC
Confidence 35799999995 5888887542 889999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.... ......+++.|+|||.+.+ ..++|+|||||++|+|++|+.||.
T Consensus 169 ~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~ 218 (353)
T cd07850 169 GTSF----------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFP 218 (353)
T ss_pred CCCC----------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCC
Confidence 2110 1123468899999999874 458999999999999999999995
No 268
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.96 E-value=3.4e-28 Score=260.72 Aligned_cols=197 Identities=23% Similarity=0.325 Sum_probs=169.2
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|++.+.||.|+||.||+|.. .++.+|+|.+.... .....+..|+.+++.++|+||+++++++.+.+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 76 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDS----TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLY 76 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccch----hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeE
Confidence 4567899999999999999999987 47889999987542 14567889999999999999999999999899999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
+||||+++++|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~- 155 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG- 155 (256)
T ss_pred EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccc-
Confidence 9999999999999998765456899999999999999999999999999999999999999999999999998653200
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchhh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPIL 901 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~~ 901 (905)
......+..|+|||.+.. ..++|+||||+++|++++ |..||...
T Consensus 156 -----------------------------~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~ 203 (256)
T cd05039 156 -----------------------------QDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI 203 (256)
T ss_pred -----------------------------cccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 011234567999999873 348999999999999997 99998543
No 269
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.96 E-value=3.9e-28 Score=263.70 Aligned_cols=197 Identities=26% Similarity=0.352 Sum_probs=170.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
..|+..+.||.|+||.||.|.+..++..+|+|.+.... .......+.+|+.+++.++|+||+++++++.+++..|+||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc--cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35888899999999999999999899999999987542 2345577889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++|++|.+++.. ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06640 82 EYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred ecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc---
Confidence 99999999999865 348899999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......++..|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 156 ------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06640 156 ------------------------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred ------------------------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCC
Confidence 01123468889999999874 4589999999999999999999963
No 270
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=3.4e-28 Score=269.42 Aligned_cols=206 Identities=21% Similarity=0.292 Sum_probs=167.9
Q ss_pred cccCCCeeecccccccCceEEEEEEEcC-------CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 739 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-------t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 739 (905)
.+..++|.+.+.||+|+||.||+|.+.. ....+|+|.+.... .......+..|+.+++.+ +||||+++++
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLG 85 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEE
Confidence 4456789999999999999999998632 34579999887532 234456788899999999 6999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCE
Q 002580 740 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (905)
Q Consensus 740 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NI 805 (905)
++...+.+|++|||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 9999999999999999999999997532 23478889999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 806 Ll~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
|++.++.+||+|||+++........ .......+++.|+|||++.+ +.++|+|
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~-------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 220 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYY-------------------------KKTSNGRLPVKWMAPEALFDRVYTHQSDVW 220 (314)
T ss_pred EEcCCCcEEEccccccccccccccc-------------------------cccccCCCCccccCHHHHccCCcCccchhh
Confidence 9999999999999999654311100 00111234567999999874 4589999
Q ss_pred HHHHHHHHHHh-CCCCchh
Q 002580 883 NYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 883 SlGvil~ellt-g~~PF~~ 900 (905)
||||++|+|++ |..||..
T Consensus 221 slG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 221 SFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred HHHHHHHHHHhCCCCCCCC
Confidence 99999999998 8999854
No 271
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.96 E-value=3.3e-28 Score=265.09 Aligned_cols=201 Identities=21% Similarity=0.325 Sum_probs=164.4
Q ss_pred CCCeeecccccccCceEEEEEEE----cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~----~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~ 744 (905)
..+|++++.||+|+||.||.+.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS---TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 35899999999999999999974 457889999998654 34455678899999999999999999998753 3
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+|+||||+++++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 57899999999999999997643 34889999999999999999999999999999999999999999999999998764
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
....... .......++..|+|||++.+ ..++|+|||||++|+|++|..|+.
T Consensus 159 ~~~~~~~------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~ 212 (284)
T cd05081 159 PQDKEYY------------------------KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC 212 (284)
T ss_pred cCCCcce------------------------eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence 3211100 00111234456999999874 458999999999999999877653
No 272
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.96 E-value=3.2e-28 Score=262.70 Aligned_cols=205 Identities=19% Similarity=0.222 Sum_probs=168.8
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCe---EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~---~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
+..++|+..+.||+|+||.||+|.+..++. .+++|.+.... .......+..|+.+++.++|+||+++++++...+
T Consensus 2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (268)
T cd05063 2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK 79 (268)
T ss_pred CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC
Confidence 345689999999999999999999876554 79999886542 2334567889999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
..|+||||+++++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||++....
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence 9999999999999999987643 458999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
..... .........++.|+|||++.+ ..++|+|||||++|++++ |..||..
T Consensus 159 ~~~~~------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 159 DDPEG------------------------TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred ccccc------------------------ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 11110 000111223567999999874 458999999999999997 9999953
No 273
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=3.1e-28 Score=264.20 Aligned_cols=196 Identities=25% Similarity=0.418 Sum_probs=169.6
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeCCeEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~l 749 (905)
.|++.+.||.|+||.||+|.+..++..|++|.+.... .......+.+|+.+++.+. |||++++++++......|+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 5888899999999999999999999999999987542 2334567788999999986 9999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
||||+++++|.+++... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 80 v~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS- 155 (277)
T ss_pred EEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-
Confidence 99999999999998653 58999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......|+..|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 156 --------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 204 (277)
T cd06917 156 --------------------------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSD 204 (277)
T ss_pred --------------------------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCC
Confidence 11223468899999999863 4589999999999999999999954
No 274
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.96 E-value=3.4e-28 Score=262.97 Aligned_cols=201 Identities=22% Similarity=0.257 Sum_probs=162.9
Q ss_pred eeecccccccCceEEEEEEEcCCCe--EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------C
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------T 745 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------~ 745 (905)
|.+.+.||+|+||.||+|.+..++. .+|+|.++.. .........+..|+.+++.++|+||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIA-ICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccC-cCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999999877765 6899988764 23445567888999999999999999999976432 3
Q ss_pred eEEEEEeccCCCCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 746 HVCLITDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
..+++|||+.+++|..++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 159 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLS 159 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcc
Confidence 578999999999999887432 2234889999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQP 897 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~P 897 (905)
........ ........+++.|+|||.+.+ +.++|+|||||++|+|++ |..|
T Consensus 160 ~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p 214 (272)
T cd05075 160 KKIYNGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTP 214 (272)
T ss_pred cccCcccc-------------------------eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCC
Confidence 65431110 001122346678999999874 458999999999999999 8999
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 215 ~~~ 217 (272)
T cd05075 215 YPG 217 (272)
T ss_pred CCC
Confidence 964
No 275
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.96 E-value=3.2e-28 Score=261.71 Aligned_cols=200 Identities=24% Similarity=0.314 Sum_probs=165.4
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|.+...||.|++|.||++.+..++ .+|+|.+..... ....+.+|+.+++.++|+|++++++++. .+..|
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~ 76 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIY 76 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcE
Confidence 34567999999999999999999986554 589998765421 2356788999999999999999999875 45689
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+.+++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||++++++.++|+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 99999999999999987555568899999999999999999999999999999999999999999999999986542111
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. .......++..|+|||.+.+ ..++|+||||+++|+|++ |..||..
T Consensus 157 ~--------------------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 206 (260)
T cd05069 157 Y--------------------------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 206 (260)
T ss_pred c--------------------------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 0 01112345678999998873 458999999999999999 9999964
No 276
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.96 E-value=4e-28 Score=259.89 Aligned_cols=196 Identities=23% Similarity=0.320 Sum_probs=167.4
Q ss_pred ccccccCceEEEEEEEcCC---CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 002580 678 KPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 754 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 754 (905)
+.||+|+||.||+|.+... +..|++|.++.... ......+..|+.++..++|+||+++++++.....++++|||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS--EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc--hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 4689999999999999765 88999999876532 224678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 755 PGGELFLLLDRQP-------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 755 ~gg~L~~~l~~~~-------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
++++|.+++.... ...+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||.+......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 158 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDD 158 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccc
Confidence 9999999998641 256899999999999999999999999999999999999999999999999999664321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.. ........+++.|+|||.+.. ..++|+|||||++|+|++ |..||..
T Consensus 159 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 210 (262)
T cd00192 159 DY-------------------------YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG 210 (262)
T ss_pred cc-------------------------cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence 11 011234467889999999874 458999999999999998 6999864
No 277
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.96 E-value=3.1e-28 Score=265.06 Aligned_cols=197 Identities=21% Similarity=0.312 Sum_probs=167.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||.|++|.||+|.+..++..||+|.+..... ......+.+|+.+++.++|+||+++++++.+.+..|+|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 58899999999999999999999999999999876422 2234556789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 753 YCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|+++ +|.+++.... ...+++..+..++.||+.||.|||++|++|+||||+||++++++.++|+|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--- 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV--- 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---
Confidence 9974 8888876543 2458999999999999999999999999999999999999999999999999986432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|++||.+.+ ..++|+|||||++|+|++|+.||.
T Consensus 155 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~ 202 (284)
T cd07836 155 ------------------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFP 202 (284)
T ss_pred ------------------------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 11123457889999999864 458999999999999999999996
No 278
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.96 E-value=4.2e-28 Score=260.62 Aligned_cols=190 Identities=37% Similarity=0.590 Sum_probs=160.6
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHH-hCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILD-MLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~-~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
+.||.|+||.||+|.+..+++.||+|.+.+...........+..|..++. ..+|+||+++++++..++.+|+||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57899999999999999999999999987653323333334455555443 45899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|.+++... ..+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 9999999764 3489999999999999999999999999999999999999999999999998854220
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+++.|+|||.+.+ ..++|+||||+++|+|++|..||..
T Consensus 150 ---------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 195 (260)
T cd05611 150 ---------------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHA 195 (260)
T ss_pred ---------------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCC
Confidence 123468889999999875 4589999999999999999999953
No 279
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.96 E-value=3.8e-28 Score=265.63 Aligned_cols=201 Identities=21% Similarity=0.276 Sum_probs=165.0
Q ss_pred CeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... .......+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA--SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC--CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 47889999999999999998753 23568888886542 234456788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCE
Q 002580 748 CLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NI 805 (905)
|++|||+.+++|.+++.... ...++...+..++.|++.||.|||++||+||||||+||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ni 158 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNV 158 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheE
Confidence 99999999999999986421 13478889999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 806 Ll~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
|+++++.+||+|||++......... .......++..|+|||.+.+ ..++|+|
T Consensus 159 ll~~~~~~kl~dfg~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~ 213 (290)
T cd05045 159 LVAEGRKMKISDFGLSRDVYEEDSY-------------------------VKRSKGRIPVKWMAIESLFDHIYTTQSDVW 213 (290)
T ss_pred EEcCCCcEEeccccccccccCccch-------------------------hcccCCCCCccccCHHHHccCCcchHhHHH
Confidence 9999999999999998653211110 01122345678999998763 4589999
Q ss_pred HHHHHHHHHHh-CCCCchh
Q 002580 883 NYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 883 SlGvil~ellt-g~~PF~~ 900 (905)
|||+++|+|++ |..||..
T Consensus 214 slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 214 SFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred HHHHHHHHHHhcCCCCCCC
Confidence 99999999998 9999853
No 280
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.96 E-value=1.3e-28 Score=269.81 Aligned_cols=195 Identities=25% Similarity=0.388 Sum_probs=167.6
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|.....||+|+||.||++.+..++..||||.+... .......+.+|+.+++.++|+||+++++.+...+..|+|||
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e 99 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR---KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc---hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEe
Confidence 455567899999999999999889999999988643 23445668899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus 100 ~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~----- 171 (292)
T cd06658 100 FLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKE----- 171 (292)
T ss_pred CCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccc-----
Confidence 9999999998854 24889999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........|++.|+|||.+.+ +.++|+||||+++|+|++|..||..
T Consensus 172 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 220 (292)
T cd06658 172 ----------------------VPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFN 220 (292)
T ss_pred ----------------------cccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 011123568999999999874 5689999999999999999999853
No 281
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=5.3e-28 Score=261.61 Aligned_cols=201 Identities=24% Similarity=0.372 Sum_probs=169.4
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccC-------HHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------RNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~-------~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
+|.+.+.||.|+||.||+|.+..+++.+|+|.+....... ....+.+..|+.+++.++|+||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 5888999999999999999998899999999886431111 112356778999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 999999999999999999765 458999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.... ........++..|+|||.+.. ..++|+||||+++|++++|..||..
T Consensus 160 ~~~~-------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 214 (272)
T cd06629 160 DIYD-------------------------NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSD 214 (272)
T ss_pred cccc-------------------------ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcC
Confidence 1100 001234568899999998763 3489999999999999999999953
No 282
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.96 E-value=3.6e-28 Score=266.18 Aligned_cols=199 Identities=19% Similarity=0.283 Sum_probs=164.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCe----
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTH---- 746 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~---- 746 (905)
++|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.+. |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEM-DEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhc-cccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 47999999999999999999999999999999886542 12223456778999999995 6999999999887665
Q ss_pred -EEEEEeccCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-CCcEEEEeccCc
Q 002580 747 -VCLITDYCPGGELFLLLDRQP---TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLS 821 (905)
Q Consensus 747 -~~lV~E~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-~~~vkL~DFG~s 821 (905)
.|++|||+++ +|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999975 8888876532 235899999999999999999999999999999999999998 889999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~P 897 (905)
....... .......+++.|+|||++.+ ..++|+||||+++|+|++|..|
T Consensus 159 ~~~~~~~---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 211 (295)
T cd07837 159 RAFSIPV---------------------------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211 (295)
T ss_pred eecCCCc---------------------------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCC
Confidence 6432110 01112356889999998863 4589999999999999999999
Q ss_pred ch
Q 002580 898 FP 899 (905)
Q Consensus 898 F~ 899 (905)
|.
T Consensus 212 ~~ 213 (295)
T cd07837 212 FP 213 (295)
T ss_pred CC
Confidence 95
No 283
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.96 E-value=5.5e-28 Score=259.93 Aligned_cols=200 Identities=20% Similarity=0.274 Sum_probs=167.6
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
+..++|.+.+.||+|+||.||++.+. .+..+++|.+... ......+.+|+.+++.++|+||+++++++.. ...|
T Consensus 3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~ 76 (260)
T cd05073 3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG----SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIY 76 (260)
T ss_pred ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC----hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeE
Confidence 56789999999999999999999864 4556999987643 2234678889999999999999999999887 7889
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+++++|.+++.......++...+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++.......
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 99999999999999987655568888999999999999999999999999999999999999999999999986532111
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
. .......++..|+|||++.+ ..++|+|||||++|++++ |..||..
T Consensus 157 ~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~ 206 (260)
T cd05073 157 Y--------------------------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPG 206 (260)
T ss_pred c--------------------------ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCC
Confidence 0 01112235678999999874 458999999999999998 9999964
No 284
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96 E-value=4.6e-28 Score=264.90 Aligned_cols=199 Identities=39% Similarity=0.616 Sum_probs=168.0
Q ss_pred CeeecccccccCceEEEEEEEc---CCCeEEEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~---~t~~~vavK~~~~~~~~-~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 747 (905)
+|++.+.||.|+||.||+|.+. .+|..||+|++...... .......+..|+.++..+ +|+||+.++++|..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4889999999999999999875 47899999998754322 122345677899999999 699999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++|++||||+|+|||++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 9999999999999999764 35889999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
. ........|+..|+|||.+.+ ..++|+||||+++|+|++|..||.
T Consensus 159 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 159 E--------------------------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred c--------------------------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 0 011123568899999999863 358999999999999999999995
No 285
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.96 E-value=1.9e-28 Score=263.71 Aligned_cols=200 Identities=30% Similarity=0.404 Sum_probs=165.0
Q ss_pred eecccccccCceEEEEEEEc----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 675 RPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 675 ~i~~~Lg~G~~g~V~~~~~~----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.+.+.||.|.||.||+|... ..+..|+||.++.. ........+.+|++.+++++||||+++++++...+..++|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv 79 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLV 79 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeeccccccccccccccccccccccccccccc
Confidence 46688999999999999997 44678999999542 3445578899999999999999999999999988889999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
||||++|+|.+++.......++......|+.||+.||.|||+++|+|+||+++||+++.++.+||+|||++........
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~- 158 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK- 158 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999999999987456699999999999999999999999999999999999999999999999999866421111
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchhh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPIL 901 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~~ 901 (905)
........+...|+|||.+.. +.++||||||+++||+++ |+.||...
T Consensus 159 ------------------------~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~ 209 (259)
T PF07714_consen 159 ------------------------YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY 209 (259)
T ss_dssp ------------------------EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS
T ss_pred ------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 011223456779999999873 559999999999999999 78998643
No 286
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.96 E-value=5.2e-28 Score=259.31 Aligned_cols=195 Identities=22% Similarity=0.289 Sum_probs=163.9
Q ss_pred ccccccCceEEEEEEEcC-CC--eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 002580 678 KPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 754 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~-t~--~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 754 (905)
+.||+|++|.||++.+.. .+ ..+|+|.+...... .....+.+|+.++++++|+||+++++++.. ...+++|||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999999855 33 36999998875432 556788899999999999999999999988 8999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCc
Q 002580 755 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (905)
Q Consensus 755 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~ 834 (905)
++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~---- 153 (257)
T cd05040 78 PLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH---- 153 (257)
T ss_pred CCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc----
Confidence 9999999998754346899999999999999999999999999999999999999999999999998765321110
Q ss_pred chhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCch
Q 002580 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFP 899 (905)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~ 899 (905)
........++..|+|||.+.+ ..++|+|||||++|+|++ |..||.
T Consensus 154 --------------------~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 202 (257)
T cd05040 154 --------------------YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWA 202 (257)
T ss_pred --------------------eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 011123457789999999874 458999999999999998 999994
No 287
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=3.8e-28 Score=268.29 Aligned_cols=200 Identities=25% Similarity=0.332 Sum_probs=167.1
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THV 747 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~ 747 (905)
..++|++.+.||.|+||.||+|.+..+|..||+|.+..... .......+.+|+.+++.++|+||+++++++... +.+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNE-RDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI 83 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccC-CCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence 46789999999999999999999999999999999875422 112223456799999999999999999998755 568
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||+. ++|.+++.... ..+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 84 FLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999995 58888887643 45899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
. .......+++.|+|||.+.+ ..++|+|||||++|+|++|.+||.
T Consensus 162 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~ 210 (309)
T cd07845 162 A---------------------------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210 (309)
T ss_pred c---------------------------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCC
Confidence 1 01122345788999999863 458999999999999999999995
No 288
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.96 E-value=3.4e-28 Score=265.21 Aligned_cols=200 Identities=21% Similarity=0.309 Sum_probs=165.8
Q ss_pred CCeeecccccccCceEEEEEEE----cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--C
Q 002580 672 QHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--T 745 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~----~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~ 745 (905)
..|++++.||+|+||.||+|.. ..++..||+|.++... .......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 4578999999999999999974 4568899999986442 334456788999999999999999999998865 5
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
..++||||++|++|.+++.+.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 7899999999999999987643 358999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
..... ........++..|+|||.+.+ +.++|+|||||++|+|+++..|+
T Consensus 161 ~~~~~------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~ 212 (284)
T cd05079 161 TDKEY------------------------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSE 212 (284)
T ss_pred cCccc------------------------eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCC
Confidence 11110 011123456778999999874 45899999999999999987664
No 289
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=2e-28 Score=269.07 Aligned_cols=194 Identities=27% Similarity=0.383 Sum_probs=166.6
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|.....||.|+||.||++.+..++..||+|.+.... ......+.+|+.++..++||||+++++++..++..|++||
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e 98 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLME 98 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc---cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEe
Confidence 4555668999999999999998899999999986542 2234567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|..++.. ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 99 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~----- 170 (297)
T cd06659 99 FLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD----- 170 (297)
T ss_pred cCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccc-----
Confidence 9999999998755 34899999999999999999999999999999999999999999999999998543211
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
........|++.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 171 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 218 (297)
T cd06659 171 ----------------------VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYF 218 (297)
T ss_pred ----------------------cccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 011224568999999999874 458999999999999999999984
No 290
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=7.8e-28 Score=263.22 Aligned_cols=199 Identities=27% Similarity=0.328 Sum_probs=167.4
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC-----
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK----- 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~----- 744 (905)
.++|.+.+.||+|+||.||++.+..+++.+|+|++.... .....+.+|+.++..+ +||||++++++|...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 578999999999999999999999999999999986531 2234567889999988 899999999998753
Q ss_pred CeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcc
Q 002580 745 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~ 822 (905)
+..|+||||+++++|.+++... ....+++..++.++.|++.||.|||++||+|+||||+||+++.++.+||+|||++.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 3689999999999999988642 23458999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhC
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFME 894 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg 894 (905)
....... ......|+..|+|||.+.. +.++|+|||||++|+|++|
T Consensus 177 ~~~~~~~---------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g 229 (291)
T cd06639 177 QLTSTRL---------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG 229 (291)
T ss_pred hcccccc---------------------------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence 5331100 1123468899999998752 4689999999999999999
Q ss_pred CCCchh
Q 002580 895 FQPFPI 900 (905)
Q Consensus 895 ~~PF~~ 900 (905)
++||..
T Consensus 230 ~~p~~~ 235 (291)
T cd06639 230 DPPLFD 235 (291)
T ss_pred CCCCCC
Confidence 999864
No 291
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.96 E-value=7.1e-28 Score=258.86 Aligned_cols=194 Identities=22% Similarity=0.297 Sum_probs=158.3
Q ss_pred cccccCceEEEEEEEc--CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 679 PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~~--~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
.||+|+||.||+|.+. .++..+|+|++... ........+.+|+.+++.++|+||+++++++. ....++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE--NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc--cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCC
Confidence 4899999999999764 44667999998754 23444567889999999999999999999886 4578999999999
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
++|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++.++.+||+|||++..........
T Consensus 79 ~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~----- 152 (257)
T cd05115 79 GPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY----- 152 (257)
T ss_pred CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccce-----
Confidence 9999998754 3458999999999999999999999999999999999999999999999999986543221100
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......+++.|+|||.+.+ +.++|+|||||++|++++ |..||..
T Consensus 153 -------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 201 (257)
T cd05115 153 -------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKK 201 (257)
T ss_pred -------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCc
Confidence 00111234578999999863 458999999999999996 9999953
No 292
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=7.3e-29 Score=271.72 Aligned_cols=209 Identities=22% Similarity=0.293 Sum_probs=176.7
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
.++..+...+.++||+|.||.|.+|.-. .+..||+|.++.. ...+....|..|+++|.+|+||||+.++++|..++.
T Consensus 533 ~EfPRs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~--a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP 609 (807)
T KOG1094|consen 533 VEFPRSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPD--ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP 609 (807)
T ss_pred hhcchhheehhhhhcCcccceeEEEEec-CceEEEEeecCcc--cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc
Confidence 3566778899999999999999999973 3689999999865 345567889999999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
+|+|+||+++|+|.+++..+....+.......|+.||+.||+||.+.++|||||.+.|+|++.++++||+|||+++.+..
T Consensus 610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys 689 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS 689 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCccccccccc
Confidence 99999999999999999887433345556677999999999999999999999999999999999999999999976542
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---CCCCchHHHHHHHHHHHH--hCCCCchhh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---AYTRMTRYNYLILVSKKF--MEFQPFPIL 901 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---~~~~sDiwSlGvil~ell--tg~~PF~~~ 901 (905)
.+. .+...-.+-...|||||.+. .++++|+|+||++|||++ +...||..+
T Consensus 690 g~y-------------------------y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~l 744 (807)
T KOG1094|consen 690 GDY-------------------------YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQL 744 (807)
T ss_pred CCc-------------------------eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhh
Confidence 221 12222345567999999998 367999999999999987 568999876
Q ss_pred hc
Q 002580 902 CR 903 (905)
Q Consensus 902 ~r 903 (905)
.+
T Consensus 745 t~ 746 (807)
T KOG1094|consen 745 TD 746 (807)
T ss_pred hH
Confidence 54
No 293
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.96 E-value=2.1e-28 Score=265.67 Aligned_cols=196 Identities=26% Similarity=0.346 Sum_probs=169.5
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|+..+.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.++|+||+++++++..++..|+|||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc--chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 5778889999999999999998899999999987542 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---- 155 (277)
T cd06642 83 YLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---- 155 (277)
T ss_pred ccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc----
Confidence 9999999998864 348899999999999999999999999999999999999999999999999986532110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......++..|+|||++.+ ..++|+|||||++|+|++|..||..
T Consensus 156 -----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 203 (277)
T cd06642 156 -----------------------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSD 203 (277)
T ss_pred -----------------------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcc
Confidence 01123468889999999975 4589999999999999999999863
No 294
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=6.7e-28 Score=259.05 Aligned_cols=199 Identities=25% Similarity=0.413 Sum_probs=173.8
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|.+.+.||.|++|.||+|.+..+++.|++|.+..... ......+..|+..+..++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD--EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVL 78 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc--hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEE
Confidence 368999999999999999999999999999999876532 145677889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
||+++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||++........
T Consensus 79 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~- 155 (264)
T cd06623 79 EYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD- 155 (264)
T ss_pred EecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-
Confidence 999999999999865 458999999999999999999999 9999999999999999999999999999865431111
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
......++..|+|||.+.. ..++|+||||+++|+|++|..||...
T Consensus 156 --------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~ 203 (264)
T cd06623 156 --------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPP 203 (264)
T ss_pred --------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 1123467889999999874 45899999999999999999999654
No 295
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=4.1e-28 Score=266.07 Aligned_cols=197 Identities=23% Similarity=0.360 Sum_probs=170.3
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.+.+.||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 36899999999999999999999889999999998643 223346678899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
+||+++++|.+++.+. .++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 95 ~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-- 169 (293)
T cd06647 95 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 169 (293)
T ss_pred EecCCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc--
Confidence 9999999999998753 37889999999999999999999999999999999999999999999999885432111
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+|||||++|++++|..||..
T Consensus 170 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~ 217 (293)
T cd06647 170 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLN 217 (293)
T ss_pred -------------------------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 01123468899999999874 4589999999999999999999963
No 296
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=1.5e-27 Score=264.52 Aligned_cols=195 Identities=25% Similarity=0.363 Sum_probs=168.0
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|...+.||+|+||.||++.+..++..+|+|.+.............+..|+.+++.++|+|++++++++..+...|+|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 48889999999999999999999999999999876544444555678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+. ++|.+++... ...+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.....
T Consensus 106 ~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------ 177 (317)
T cd06635 106 YCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP------ 177 (317)
T ss_pred CCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC------
Confidence 996 5777777554 34589999999999999999999999999999999999999999999999998754221
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCcccccccccc------CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF------AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~------~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....|++.|+|||.+. ...++|+|||||++|+|++|..||..
T Consensus 178 -------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~ 226 (317)
T cd06635 178 -------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 226 (317)
T ss_pred -------------------------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 12346888999999974 24589999999999999999999853
No 297
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.96 E-value=5.5e-28 Score=265.28 Aligned_cols=203 Identities=23% Similarity=0.325 Sum_probs=165.6
Q ss_pred CCCeeecccccccCceEEEEEEEcC----------------CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCc
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCG----------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 734 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~----------------t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nI 734 (905)
.++|++.+.||+|+||.||++.+.. ++..+|+|.+... ........+.+|+.+++.++|+||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED--ANKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCc
Confidence 4579999999999999999986532 3457899988754 233445678899999999999999
Q ss_pred ceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCE
Q 002580 735 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPT---------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (905)
Q Consensus 735 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~---------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NI 805 (905)
+++++++...+..|++|||+++++|.+++..... ..+++..+..++.||+.||.|||++||+|+||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 9999999999999999999999999999876421 2366788999999999999999999999999999999
Q ss_pred EEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 806 Ll~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
|++.++.++|+|||++........ ........+++.|+|||...+ ..++|+|
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Diw 216 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDY-------------------------YRIQGRAVLPIRWMSWESILLGKFTTASDVW 216 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcc-------------------------eeccCcCcCccccCCHHHHhcCCccchhhhh
Confidence 999999999999999865421110 001112344678999998763 4589999
Q ss_pred HHHHHHHHHHh--CCCCchh
Q 002580 883 NYLILVSKKFM--EFQPFPI 900 (905)
Q Consensus 883 SlGvil~ellt--g~~PF~~ 900 (905)
||||++|+|++ |..||..
T Consensus 217 SlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 217 AFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred HHHHHHHHHHHhCCCCCccc
Confidence 99999999998 7788853
No 298
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.96 E-value=2.6e-28 Score=262.74 Aligned_cols=197 Identities=25% Similarity=0.420 Sum_probs=171.9
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
++|++.+.||.|++|.||++.+..+++.+++|.+.... .......+.+|+++++.++||||+++++++...+..|+++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEI--NEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICM 78 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEeccc--ChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEE
Confidence 36888999999999999999999999999999987653 2345567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
||+++++|.+++.... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~--- 154 (265)
T cd06605 79 EYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS--- 154 (265)
T ss_pred EecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH---
Confidence 9999999999998653 568999999999999999999999 99999999999999999999999999998543200
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......++..|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 155 --------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 201 (265)
T cd06605 155 --------------------------LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPP 201 (265)
T ss_pred --------------------------HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCc
Confidence 0111568889999999874 4589999999999999999999954
No 299
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1e-27 Score=261.85 Aligned_cols=199 Identities=27% Similarity=0.425 Sum_probs=168.9
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCL 749 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~l 749 (905)
++|...+.||.|++|.||+|.+..+++.+|+|.+.... .......+.+|+++++.++||||++++++|.. .+.+|+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP--NPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC--chHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 46899999999999999999999999999999987542 23455678899999999999999999998865 347899
Q ss_pred EEeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 750 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
||||+++++|.+++.. .....+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999999988764 22345889999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
......++..|+|||.+.+ +.++|+|||||++|+|++|..||...
T Consensus 159 -----------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 159 -----------------------------LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred -----------------------------ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 0113457889999999874 45899999999999999999999754
No 300
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.96 E-value=9.7e-28 Score=259.12 Aligned_cols=198 Identities=23% Similarity=0.287 Sum_probs=166.0
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
+.+.....||+|+||.||++.+..++..|++|.+... .......+.+|+.+++.++|+||+++++++..++..++++
T Consensus 8 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 84 (268)
T cd06624 8 DENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER---DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFM 84 (268)
T ss_pred ccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC---CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEE
Confidence 3444445799999999999999999999999988754 3345567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-CCcEEEEeccCccccCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVL--KEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l--~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-~~~vkL~DFG~s~~~~~~~ 828 (905)
||+++++|.+++.... ..+ +...+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~ 163 (268)
T cd06624 85 EQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN 163 (268)
T ss_pred ecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC
Confidence 9999999999987642 224 78888899999999999999999999999999999976 6799999999985432110
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.. ..++|+||||+++|+|++|..||..
T Consensus 164 ---------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 164 ---------------------------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred ---------------------------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 01123357899999999853 3589999999999999999999964
No 301
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=5.8e-28 Score=269.97 Aligned_cols=206 Identities=21% Similarity=0.302 Sum_probs=167.6
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCC-------CeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 739 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t-------~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 739 (905)
.+...+|++.+.||+|+||.||+|.+... +..+|+|.+... ........+.+|+.+++++ +|+||+++++
T Consensus 8 ~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 8 ELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred ccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence 45566899999999999999999986432 246899987743 2334556788999999999 7999999999
Q ss_pred EEEeCCeEEEEEeccCCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCE
Q 002580 740 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 805 (905)
Q Consensus 740 ~~~~~~~~~lV~E~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NI 805 (905)
++...+.+|++|||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 9999999999999999999999997532 12467788899999999999999999999999999999
Q ss_pred EEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHH
Q 002580 806 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRY 882 (905)
Q Consensus 806 Ll~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiw 882 (905)
|++.++.+||+|||+++....... ........++..|+|||++.+ ..++|+|
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 220 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 220 (334)
T ss_pred EEcCCCcEEECCcccceecccccc-------------------------cccccCCCcCceEcCHHHhccCCcCchhhhH
Confidence 999999999999999865431110 001112234568999999874 4589999
Q ss_pred HHHHHHHHHHh-CCCCchh
Q 002580 883 NYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 883 SlGvil~ellt-g~~PF~~ 900 (905)
||||++|+|++ |..||..
T Consensus 221 slG~il~el~~~g~~p~~~ 239 (334)
T cd05100 221 SFGVLLWEIFTLGGSPYPG 239 (334)
T ss_pred HHHHHHHHHHhcCCCCCCC
Confidence 99999999998 8898853
No 302
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.96 E-value=4.3e-28 Score=259.72 Aligned_cols=193 Identities=21% Similarity=0.331 Sum_probs=163.2
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
..++|++.+.||+|+||.||++.. +++.+|+|.+.... ....+.+|+.+++.++||||+++++++..+ ..|+
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~ 75 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI 75 (254)
T ss_pred cHHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence 456899999999999999999875 77889999886431 235678899999999999999999998754 5799
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
+|||+.+++|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-- 153 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-- 153 (254)
T ss_pred EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc--
Confidence 999999999999998765556899999999999999999999999999999999999999999999999998542210
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
......+..|+|||.+.+ ..++|+|||||++|+|++ |+.||..
T Consensus 154 ----------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~ 200 (254)
T cd05083 154 ----------------------------VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPK 200 (254)
T ss_pred ----------------------------CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 011233567999999873 458999999999999997 9999954
No 303
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=8.6e-28 Score=257.98 Aligned_cols=200 Identities=25% Similarity=0.438 Sum_probs=170.8
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--CCeEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--KTHVCLI 750 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~~~~~lV 750 (905)
+|.+.+.||.|+||.||++.+..++..+|+|.+..... .......+..|+.+++.++|+||+++++++.. ....|++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 58899999999999999999999999999999876533 34456778899999999999999999998763 4578999
Q ss_pred EeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 751 TDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLH-----CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH-----~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
|||+++++|.+++... ....+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 9999999999998753 2346899999999999999999999 89999999999999999999999999999866
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...... ......+++.|+|||.+.. ..++|+||||+++|+|++|..||..
T Consensus 160 ~~~~~~---------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 160 LGHDSS---------------------------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred ccCCcc---------------------------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 431110 1223468999999999874 4589999999999999999999964
No 304
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.96 E-value=1e-27 Score=257.22 Aligned_cols=194 Identities=21% Similarity=0.298 Sum_probs=160.2
Q ss_pred ccccccCceEEEEEEEcCCC---eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEecc
Q 002580 678 KPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYC 754 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~---~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~ 754 (905)
+.||+|+||.||+|.+..++ ..+|+|.+...... .....+..|+.+++.+.|+||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999876554 78999998765332 34567889999999999999999999876 45689999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCc
Q 002580 755 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (905)
Q Consensus 755 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~ 834 (905)
++++|.+++.... .+++..+..++.|++.||.|||+++++|+||||+|||++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~---- 151 (257)
T cd05060 78 PLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY---- 151 (257)
T ss_pred CCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc----
Confidence 9999999998754 5899999999999999999999999999999999999999999999999998654321110
Q ss_pred chhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
........++..|+|||.+.+ ..++|+|||||++|++++ |.+||..
T Consensus 152 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~ 201 (257)
T cd05060 152 --------------------YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGE 201 (257)
T ss_pred --------------------cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCccc
Confidence 001111234568999999874 458999999999999997 9999954
No 305
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=3.9e-28 Score=271.62 Aligned_cols=199 Identities=20% Similarity=0.343 Sum_probs=165.5
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----C
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~ 745 (905)
.++|.+.+.||+|+||.||+|.+..+|..||+|.+... ........+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 36899999999999999999999999999999998642 1233455677899999999999999999887643 3
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
.+|+++||+. ++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 82 ~~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 82 DVYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred eEEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 5899999995 588887754 348999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.... .........||+.|+|||.+.+ ..++|+|||||++|+|++|+.||.
T Consensus 158 ~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~ 211 (336)
T cd07849 158 PEHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFP 211 (336)
T ss_pred cccc------------------------ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 2110 0011234578999999998753 458999999999999999999994
No 306
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.96 E-value=7.2e-28 Score=263.10 Aligned_cols=203 Identities=22% Similarity=0.292 Sum_probs=167.5
Q ss_pred cCCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
..++|++.+.||+|+||.||+|.+.. ++..+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 45689999999999999999998753 67889999987542 234456788999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCC
Q 002580 745 THVCLITDYCPGGELFLLLDRQP--------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 804 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~--------------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~N 804 (905)
...|++|||+++++|.+++.... ...+++..++.++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999999999997431 1246788899999999999999999999999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchH
Q 002580 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTR 881 (905)
Q Consensus 805 ILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDi 881 (905)
||++.++.++|+|||++........ ........++..|+|||.+.+ ..++|+
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY-------------------------YKASENDAIPIRWMPPESIFYNRYTTESDV 215 (288)
T ss_pred eEecCCCceEECccccceecccCcc-------------------------ccccCCCccChhhcCHHHHhcCCCCchhHH
Confidence 9999999999999999865321110 001112234668999998874 458999
Q ss_pred HHHHHHHHHHHh-CCCCch
Q 002580 882 YNYLILVSKKFM-EFQPFP 899 (905)
Q Consensus 882 wSlGvil~ellt-g~~PF~ 899 (905)
|||||++|+|++ |..||.
T Consensus 216 ~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 216 WAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred HHHHHHHHHHHhCCCCCCC
Confidence 999999999997 888884
No 307
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=7.9e-28 Score=260.12 Aligned_cols=188 Identities=26% Similarity=0.354 Sum_probs=158.2
Q ss_pred CCeeecccc--cccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 002580 672 QHFRPIKPL--GSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 672 ~~y~i~~~L--g~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 748 (905)
++|.+.+.+ |+|+||.||++.+..++..+|+|.+....... .|+.....+ +|+||++++++|...+..|
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 466666666 99999999999999999999999987542211 122222222 7999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC-cEEEEeccCccccCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCK 827 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~-~vkL~DFG~s~~~~~~ 827 (905)
+||||+++++|.+++.... .+++..+..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus 86 iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~- 162 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT- 162 (267)
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-
Confidence 9999999999999997753 689999999999999999999999999999999999999988 999999999854321
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+++.|+|||++.+ ..++|+||||+++|+|++|..||..
T Consensus 163 ------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 163 ------------------------------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred ------------------------------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 112358899999999974 4589999999999999999999963
No 308
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.95 E-value=1e-27 Score=260.45 Aligned_cols=196 Identities=26% Similarity=0.372 Sum_probs=168.6
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
-|++.+.||.|+||.||+|.+..++..+|+|.+.... .......+.+|+.++..++||||+++++++..++..|+|||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 3778889999999999999998899999999886442 23345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|..++.. ..++...+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus 83 ~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----- 154 (277)
T cd06641 83 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT----- 154 (277)
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc-----
Confidence 9999999999864 34889999999999999999999999999999999999999999999999998543210
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........++..|+|||.+.+ ..++|+|||||++|+|++|..||..
T Consensus 155 ----------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 203 (277)
T cd06641 155 ----------------------QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSE 203 (277)
T ss_pred ----------------------hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCc
Confidence 001123468889999999874 4589999999999999999999963
No 309
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.95 E-value=1.2e-27 Score=258.85 Aligned_cols=193 Identities=23% Similarity=0.284 Sum_probs=158.7
Q ss_pred ccccccCceEEEEEEEcCCCe--EEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEEecc
Q 002580 678 KPLGSGDTGSVHLVELCGSGQ--YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLITDYC 754 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~--~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~E~~ 754 (905)
+.||+|+||.||++.+..++. .+++|.++.. ........+..|+.++.++ +||||+++++++...+.+|++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc--CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999999987775 4688877642 2334556788999999999 8999999999999999999999999
Q ss_pred CCCCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 755 PGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 755 ~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
++++|.+++.... ...+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||+
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCC
Confidence 9999999997542 12478899999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCC
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQ 896 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~ 896 (905)
+..... .........+..|+|||++.. ..++|+|||||++|+|++ |..
T Consensus 159 ~~~~~~----------------------------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~ 210 (270)
T cd05047 159 SRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 210 (270)
T ss_pred ccccch----------------------------hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 742110 000111234567999999863 458999999999999996 999
Q ss_pred Cchh
Q 002580 897 PFPI 900 (905)
Q Consensus 897 PF~~ 900 (905)
||..
T Consensus 211 pf~~ 214 (270)
T cd05047 211 PYCG 214 (270)
T ss_pred Cccc
Confidence 9953
No 310
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95 E-value=9e-28 Score=264.76 Aligned_cols=203 Identities=20% Similarity=0.238 Sum_probs=166.1
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 745 (905)
.++|++.+.||+|+||.||+|.+..+++.||+|.+..... .......+.+|+.+++.++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC-cCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 5689999999999999999999999999999998865422 1222334567999999999999999999887543
Q ss_pred ---eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcc
Q 002580 746 ---HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (905)
Q Consensus 746 ---~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~ 822 (905)
..|+||||+. ++|..++.... ..+++..++.++.||+.||.|||++|++|+||||+||+++.++.+||+|||++.
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 4699999995 58888876542 358999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCc
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF 898 (905)
......... ........++..|+|||.+.+ ..++|+||||+++|+|++|..||
T Consensus 168 ~~~~~~~~~-----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~ 224 (310)
T cd07865 168 AFSLSKNSK-----------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224 (310)
T ss_pred cccCCcccC-----------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCC
Confidence 543211100 011123467889999998864 35899999999999999999998
Q ss_pred h
Q 002580 899 P 899 (905)
Q Consensus 899 ~ 899 (905)
.
T Consensus 225 ~ 225 (310)
T cd07865 225 Q 225 (310)
T ss_pred C
Confidence 5
No 311
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=6.6e-28 Score=262.48 Aligned_cols=197 Identities=22% Similarity=0.326 Sum_probs=167.4
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|++.+.||.|++|.||+|.+..+|..||+|++..... .......+.+|+++++.++|+||+++++++.+.+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE-DEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc-cccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 6778899999999999999999999999999875422 222335677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+ +++|.+++.......+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~----- 153 (283)
T cd07835 80 L-DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV----- 153 (283)
T ss_pred c-CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-----
Confidence 9 5689999877654468999999999999999999999999999999999999999999999999985432110
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......+++.|+|||++.+ ..++|+||||+++|+|++|..||.
T Consensus 154 ----------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 201 (283)
T cd07835 154 ----------------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFP 201 (283)
T ss_pred ----------------------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 01112246889999998863 458999999999999999999995
No 312
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.95 E-value=3.3e-28 Score=261.41 Aligned_cols=188 Identities=16% Similarity=0.213 Sum_probs=155.9
Q ss_pred ccccccCceEEEEEEEcCCCe-------EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 678 KPLGSGDTGSVHLVELCGSGQ-------YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~-------~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
+.||.|+||.||+|.+..++. .+++|.+... .....+.+..|..+++.+.||||+++++++..+...++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 368999999999999865544 3788877543 233456778899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCc--------EEEEeccCcc
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--------VSLTDFDLSC 822 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~--------vkL~DFG~s~ 822 (905)
|||+++++|..++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.++. ++++|||++.
T Consensus 78 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred EecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999999997653 35889999999999999999999999999999999999987664 6999999874
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhC-CCC
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFME-FQP 897 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg-~~P 897 (905)
... ......+++.|+|||.+.+ ..++|+|||||++|+|++| ..|
T Consensus 157 ~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~ 205 (258)
T cd05078 157 TVL-------------------------------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP 205 (258)
T ss_pred ccC-------------------------------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 321 1123467889999999874 3489999999999999999 466
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 206 ~~~ 208 (258)
T cd05078 206 LSA 208 (258)
T ss_pred hhh
Confidence 643
No 313
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=9.6e-28 Score=267.49 Aligned_cols=202 Identities=18% Similarity=0.210 Sum_probs=164.3
Q ss_pred cccccc--CceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccC
Q 002580 678 KPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 755 (905)
Q Consensus 678 ~~Lg~G--~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 755 (905)
..||.| +||+||++.+..+|+.||+|++..... .....+.+.+|+.+++.++||||++++++|...+..|+||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC-TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 356666 999999999999999999999875422 33455778899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcc
Q 002580 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 835 (905)
Q Consensus 756 gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~ 835 (905)
+++|.+++.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~---- 158 (328)
T cd08226 83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA---- 158 (328)
T ss_pred CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc----
Confidence 9999999987655568999999999999999999999999999999999999999999999998653321110000
Q ss_pred hhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 836 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...........++..|+|||++.+ ..++|+|||||++|+|++|+.||..
T Consensus 159 ----------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~ 212 (328)
T cd08226 159 ----------------KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQD 212 (328)
T ss_pred ----------------cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 000011112345678999999864 3589999999999999999999964
No 314
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.95 E-value=1.6e-27 Score=254.42 Aligned_cols=193 Identities=22% Similarity=0.330 Sum_probs=160.5
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 757 (905)
+.||+|+||.||++... ++..+|+|.+.... .......+.+|+.+++.++||||+++++++...+..++||||++++
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 77 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL--PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG 77 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence 36899999999999864 67889999887542 2333456888999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchh
Q 002580 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (905)
Q Consensus 758 ~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~ 837 (905)
+|.+++.... ..+++..+..++.|++.+|.|||++|++|+||||+||+++.++.+||+|||++........
T Consensus 78 ~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-------- 148 (250)
T cd05085 78 DFLSFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-------- 148 (250)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc--------
Confidence 9999987543 3578999999999999999999999999999999999999999999999999854321100
Q ss_pred hhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
.......+++.|+|||++.+ ..++|+||||+++|++++ |..||..
T Consensus 149 ------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~ 197 (250)
T cd05085 149 ------------------SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPG 197 (250)
T ss_pred ------------------ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCC
Confidence 00112234578999999874 448999999999999998 9999964
No 315
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95 E-value=7.8e-28 Score=257.59 Aligned_cols=200 Identities=23% Similarity=0.393 Sum_probs=171.2
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|.+.+.||.|+||.||++.+..++..+|+|.+..... .......+.+|+.+++.++|+||+++++.+...+..|+++|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKM-PVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhc-cchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 58899999999999999999999999999999876422 22344567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC-cEEEEeccCccccCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~-~vkL~DFG~s~~~~~~~~~~ 831 (905)
|+++++|.+++.......+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--- 156 (257)
T cd08225 80 YCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM--- 156 (257)
T ss_pred cCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc---
Confidence 99999999999876555689999999999999999999999999999999999998876 56999999886543111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......|++.|+|||++.. ..++|+||||+++|+|++|..||..
T Consensus 157 ------------------------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 204 (257)
T cd08225 157 ------------------------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEG 204 (257)
T ss_pred ------------------------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 01123458899999998874 4689999999999999999999863
No 316
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.95 E-value=7.7e-28 Score=258.36 Aligned_cols=199 Identities=38% Similarity=0.652 Sum_probs=168.4
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||.|+||.||++.+..+++.+++|.+.............+.+|+.+++.++|+||+++++.+......|++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 68999999999999989999999999766444445667888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 002580 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (905)
Q Consensus 760 ~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~ 839 (905)
.+++.+.. .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------- 151 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINL------- 151 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccc-------
Confidence 99998753 589999999999999999999999999999999999999999999999999865332111000
Q ss_pred ccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
...........+++.|+|||.+.. ..++|+||||+++|+|++|..||.
T Consensus 152 ------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~ 202 (265)
T cd05579 152 ------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFH 202 (265)
T ss_pred ------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence 000112234568889999999874 458999999999999999999985
No 317
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.95 E-value=1.3e-27 Score=262.10 Aligned_cols=210 Identities=17% Similarity=0.143 Sum_probs=155.9
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCC---CeEEEEEEeecccccCHHHH--------HHHHHHHHHHHhCCCCCcceE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKV--------HRACAEREILDMLDHPFVPAL 737 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t---~~~vavK~~~~~~~~~~~~~--------~~~~~E~~il~~l~h~nIv~l 737 (905)
+..++|.+.+.||+|+||.||+|.+..+ +..+|+|+............ .....+...+..+.|+||+++
T Consensus 9 i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 9 ITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred cCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 4457899999999999999999998777 66778876443211100000 111223334556789999999
Q ss_pred EEEEEeCC----eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcE
Q 002580 738 YASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHV 813 (905)
Q Consensus 738 ~~~~~~~~----~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~v 813 (905)
++++.... ..+++++++ ..++.+.+... ...++..+..++.|++.||.|||+++|+||||||+|||++.++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred EEeeeEecCCceEEEEEEehh-ccCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcE
Confidence 98766443 457888887 45777776553 236788899999999999999999999999999999999999999
Q ss_pred EEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHH
Q 002580 814 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSK 890 (905)
Q Consensus 814 kL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~e 890 (905)
+|+|||+|+......... ...........||+.|+|||++.+ +.++|+|||||+||+
T Consensus 166 ~l~DFGla~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~e 225 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHI--------------------EYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLK 225 (294)
T ss_pred EEEEcCCceeeccCCccc--------------------ccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999997653211100 000011233579999999999874 458999999999999
Q ss_pred HHhCCCCchhh
Q 002580 891 KFMEFQPFPIL 901 (905)
Q Consensus 891 lltg~~PF~~~ 901 (905)
|++|.+||...
T Consensus 226 l~~g~~P~~~~ 236 (294)
T PHA02882 226 WAGIKLPWKGF 236 (294)
T ss_pred HHhCCCCCCcc
Confidence 99999999754
No 318
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.95 E-value=1.1e-27 Score=264.05 Aligned_cols=203 Identities=19% Similarity=0.268 Sum_probs=165.6
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCe----EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
+..++|+..+.||+|+||.||++.+..++. .+|+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~ 81 (303)
T cd05110 4 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP 81 (303)
T ss_pred cchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC
Confidence 345689999999999999999999877775 46888876432 233344678899999999999999999988754
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+++++|+++|+|.+++.... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++...
T Consensus 82 -~~~~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 82 -TIQLVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred -CceeeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccc
Confidence 5779999999999999987643 34889999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
...... .......++..|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 160 ~~~~~~-------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~ 214 (303)
T cd05110 160 EGDEKE-------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG 214 (303)
T ss_pred cCcccc-------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 311110 01122345778999999874 458999999999999997 8999853
No 319
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.95 E-value=1.1e-27 Score=259.69 Aligned_cols=202 Identities=19% Similarity=0.233 Sum_probs=168.0
Q ss_pred CCCeeecccccccCceEEEEEEEcC-----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCG-----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~-----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
..+|++++.||.|+||.||+|.... +...+++|.+.... .......+.+|+.++++++|+||+++++++.+.+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK--DENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc--chHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 4689999999999999999999754 34679999876431 2234567889999999999999999999999989
Q ss_pred eEEEEEeccCCCCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEec
Q 002580 746 HVCLITDYCPGGELFLLLDRQPT-------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~-------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DF 818 (905)
..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999999976541 15899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-C
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-E 894 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g 894 (905)
|++....... ........++..|+|||.+.+ ..++|+||||+++|+|++ |
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~ 215 (275)
T cd05046 162 SLSKDVYNSE--------------------------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQG 215 (275)
T ss_pred ccccccCccc--------------------------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCC
Confidence 9985432110 011123356778999998863 458999999999999998 8
Q ss_pred CCCchh
Q 002580 895 FQPFPI 900 (905)
Q Consensus 895 ~~PF~~ 900 (905)
..||..
T Consensus 216 ~~p~~~ 221 (275)
T cd05046 216 ELPFYG 221 (275)
T ss_pred CCCccc
Confidence 889854
No 320
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.95 E-value=1.3e-27 Score=255.96 Aligned_cols=198 Identities=20% Similarity=0.309 Sum_probs=165.9
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
...+|++.+.||.|+||.||++.+. .+..+|+|.+..... ....+..|+++++.++||||+++++++......|+
T Consensus 2 ~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 76 (256)
T cd05112 2 HPSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM----SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICL 76 (256)
T ss_pred ChhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC----CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEE
Confidence 3468999999999999999999885 467899998875432 22457789999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
+|||+++++|.+++.... ..+++..+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.......
T Consensus 77 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 154 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ- 154 (256)
T ss_pred EEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCc-
Confidence 999999999999987643 347899999999999999999999999999999999999999999999999986432110
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCch
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFP 899 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~ 899 (905)
........++..|+|||.+.+ ..++|+||||+++|+|++ |..||.
T Consensus 155 -------------------------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~ 203 (256)
T cd05112 155 -------------------------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYE 203 (256)
T ss_pred -------------------------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCC
Confidence 001122335678999999874 348999999999999998 999985
No 321
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.95 E-value=7.3e-28 Score=261.11 Aligned_cols=220 Identities=31% Similarity=0.478 Sum_probs=178.7
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV 750 (905)
++|.+.+.||+|+||.||++.+..++..|++|++.+...........+..|..+++.+. |+||+++++++..++..|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47999999999999999999999999999999998754444555677889999999998 99999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
||++++++|.+++.... .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999998753 5999999999999999999999999999999999999999999999999998765432211
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
..... ..................+.++..|+|||.+.. ..++|+||||+++|++++|..||..
T Consensus 159 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 224 (280)
T cd05581 159 ESNKG-------DATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRG 224 (280)
T ss_pred ccCCC-------CCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 00000 000000000111223345678999999998874 4489999999999999999999964
No 322
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.95 E-value=1.5e-27 Score=259.41 Aligned_cols=205 Identities=17% Similarity=0.163 Sum_probs=169.7
Q ss_pred ccCCCeeecccccccCceEEEEEEEcC----CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCG----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~----t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~- 743 (905)
+..++|.+.+.||+|+||.||+|.+.. ++..+++|.+... ........+.+|+.+++.++|+||+++++++..
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 80 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED 80 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 456789999999999999999999876 3578999987643 244556778899999999999999999998765
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEe
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQPT------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 817 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~D 817 (905)
+...+++++|+++++|.+++..... ..+++..+..++.||+.||.|||+++++|+||||+||+++.++.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence 5678999999999999999876422 3588999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-
Q 002580 818 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM- 893 (905)
Q Consensus 818 FG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt- 893 (905)
||+++........ .......++..|+|||++.+ ..++|+|||||++|++++
T Consensus 161 ~g~~~~~~~~~~~-------------------------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~ 215 (280)
T cd05043 161 NALSRDLFPMDYH-------------------------CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTL 215 (280)
T ss_pred CCCcccccCCceE-------------------------EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcC
Confidence 9998654321110 00112245678999999874 458999999999999998
Q ss_pred CCCCchh
Q 002580 894 EFQPFPI 900 (905)
Q Consensus 894 g~~PF~~ 900 (905)
|+.||..
T Consensus 216 g~~p~~~ 222 (280)
T cd05043 216 GQTPYVE 222 (280)
T ss_pred CCCCcCc
Confidence 9999963
No 323
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.95 E-value=1.1e-27 Score=259.97 Aligned_cols=187 Identities=16% Similarity=0.174 Sum_probs=153.2
Q ss_pred cccccCceEEEEEEEcCC------------------------CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCc
Q 002580 679 PLGSGDTGSVHLVELCGS------------------------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV 734 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~~~t------------------------~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nI 734 (905)
.||+|+||.||++....+ ...+++|++... .......+..|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS---HRDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH---HHHHHHHHHHHHHHHhcCCCCCe
Confidence 689999999999875322 235888887643 22334567788999999999999
Q ss_pred ceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC---
Q 002580 735 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 811 (905)
Q Consensus 735 v~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~--- 811 (905)
+++++++......|+||||+++++|..++... ...+++..+..++.||+.||.|||++||+||||||+|||++..+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999988653 34589999999999999999999999999999999999997543
Q ss_pred ----cEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHH
Q 002580 812 ----HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYN 883 (905)
Q Consensus 812 ----~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwS 883 (905)
.+||+|||++..... .....++..|+|||.+.+ ..++|+||
T Consensus 158 ~~~~~~kl~d~g~~~~~~~-------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALS-------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred CccceeeecCCcccccccc-------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 489999998743210 112356788999998863 45899999
Q ss_pred HHHHHHHHH-hCCCCchh
Q 002580 884 YLILVSKKF-MEFQPFPI 900 (905)
Q Consensus 884 lGvil~ell-tg~~PF~~ 900 (905)
|||++|+++ +|..||..
T Consensus 207 lG~~l~el~~~g~~p~~~ 224 (274)
T cd05076 207 FGTTLLEICFDGEVPLKE 224 (274)
T ss_pred HHHHHHHHHhCCCCCccc
Confidence 999999995 79999864
No 324
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.95 E-value=1.4e-27 Score=257.34 Aligned_cols=187 Identities=17% Similarity=0.216 Sum_probs=154.1
Q ss_pred ccccccCceEEEEEEEcC------------CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 678 KPLGSGDTGSVHLVELCG------------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~------------t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
+.||+|+||.||++.... ....+++|.+... .......+..|+.++..++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999998532 2235888887643 2334456788899999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCc-------EEEEec
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------VSLTDF 818 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~-------vkL~DF 818 (905)
..+++|||+++++|..++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++. ++++||
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999998886543 45899999999999999999999999999999999999986664 899999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHH-h
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKF-M 893 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~ell-t 893 (905)
|++.... ......++..|+|||.+.. ..++|+|||||++|+|+ .
T Consensus 157 g~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~ 205 (262)
T cd05077 157 GIPITVL-------------------------------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYN 205 (262)
T ss_pred CCCcccc-------------------------------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhC
Confidence 9885422 1123457889999998862 34899999999999997 6
Q ss_pred CCCCch
Q 002580 894 EFQPFP 899 (905)
Q Consensus 894 g~~PF~ 899 (905)
|..||.
T Consensus 206 ~~~p~~ 211 (262)
T cd05077 206 GEIPLK 211 (262)
T ss_pred CCCCCC
Confidence 888885
No 325
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95 E-value=4e-29 Score=255.65 Aligned_cols=204 Identities=24% Similarity=0.340 Sum_probs=168.1
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCe----EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CC
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KT 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~ 745 (905)
...|++++.||+|+||.||+|....++. .||+|.++...- ....-....+|+.+++.++||||+.+..+|.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd-~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKD-GTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCC-CCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 4579999999999999999997655533 789998875421 11222456789999999999999999998876 78
Q ss_pred eEEEEEeccCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC----CcEEEEec
Q 002580 746 HVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDF 818 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~----~~vkL~DF 818 (905)
.+++++||.+ -+|..+++.+ ..+.++...+..|+.||+.|+.|||++=|+||||||.|||+..+ |.+||+||
T Consensus 102 ~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 102 KVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred eEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 9999999995 5888888743 23568999999999999999999999999999999999999877 89999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhC
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFME 894 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg 894 (905)
|++++...+-. +.......+-|.+|.|||.+.| +.+.|+|+.|||+.||++-
T Consensus 181 GlaR~~~~plk------------------------pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 181 GLARLFNNPLK------------------------PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred cHHHHhhcccc------------------------ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHcc
Confidence 99988653322 2223345678999999999995 3488999999999999999
Q ss_pred CCCchh
Q 002580 895 FQPFPI 900 (905)
Q Consensus 895 ~~PF~~ 900 (905)
.+.|.-
T Consensus 237 ~PlF~g 242 (438)
T KOG0666|consen 237 EPLFKG 242 (438)
T ss_pred Cccccc
Confidence 988853
No 326
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.95 E-value=1.6e-27 Score=267.77 Aligned_cols=194 Identities=25% Similarity=0.382 Sum_probs=164.7
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
.++|.+.+.||+|+||.||++.+..++..||+|.+.+.. ........+.+|+.+++.++|+||+++++++...
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc-hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 478999999999999999999999999999999987542 2223345677899999999999999999988643
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...|++++++ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~ 170 (345)
T cd07877 95 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 170 (345)
T ss_pred ccEEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence 3478888887 8899888764 24899999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. ......+++.|+|||.+.+ ..++|+|||||++|+|++|+.||+
T Consensus 171 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~ 219 (345)
T cd07877 171 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 219 (345)
T ss_pred cc------------------------------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 20 1123467889999998764 458999999999999999999995
No 327
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.95 E-value=1.6e-27 Score=255.02 Aligned_cols=198 Identities=24% Similarity=0.331 Sum_probs=167.4
Q ss_pred eeecccccccCceEEEEEEEcCCC----eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEE
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~----~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 749 (905)
+++.+.||.|+||.||++.+..++ ..+|+|.+.... .......+..|+.++..++|+||+++++++.+.+..|+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA--DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC--ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 356788999999999999998766 899999986542 22256788899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 750 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 750 V~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
+|||+++++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........
T Consensus 79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999999765433389999999999999999999999999999999999999999999999999866432211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCch
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFP 899 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~ 899 (905)
. ......+++.|+|||.+.. ..++|+|||||++|+|++ |.+||.
T Consensus 159 ~--------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~ 206 (258)
T smart00219 159 Y--------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYP 206 (258)
T ss_pred c--------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 0 0001226789999998863 559999999999999998 889986
No 328
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.95 E-value=1.9e-27 Score=257.17 Aligned_cols=202 Identities=20% Similarity=0.245 Sum_probs=165.9
Q ss_pred cCCCeeecccccccCceEEEEEEEcCC---CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
...+|.+.+.||.|+||.||+|.+... ...+++|.+.... .....+.+.+|+.+++.++||||+++++++.+ +.
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~ 80 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT--SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP 80 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC--CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence 456799999999999999999987544 4568999876442 24456678899999999999999999998875 56
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
.|+||||+++++|.+++.... ..++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 789999999999999997643 3589999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchhh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPIL 901 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~~ 901 (905)
... .......+++.|+|||.+.+ ..++|+|||||++|++++ |..||...
T Consensus 160 ~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~ 212 (270)
T cd05056 160 ESY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGV 212 (270)
T ss_pred ccc--------------------------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCC
Confidence 110 01112234568999998863 458999999999999986 99999543
No 329
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.95 E-value=2.3e-27 Score=259.01 Aligned_cols=194 Identities=25% Similarity=0.409 Sum_probs=166.8
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|...+.||.|++|.||++.+..++..+++|.+... .......+.+|+.+++.++|+||+++++++...+..|+++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 455567899999999999999889999999988643 23344567889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.. ..++...+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 97 ~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~----- 168 (285)
T cd06648 97 FLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE----- 168 (285)
T ss_pred ccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC-----
Confidence 9999999999876 34899999999999999999999999999999999999999999999999987543210
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
........|++.|+|||.+.+ ..++|+|||||++|+|++|..||.
T Consensus 169 ----------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~ 216 (285)
T cd06648 169 ----------------------VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYF 216 (285)
T ss_pred ----------------------CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCc
Confidence 011123468899999999874 458999999999999999999984
No 330
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=5.9e-28 Score=269.93 Aligned_cols=201 Identities=23% Similarity=0.369 Sum_probs=167.7
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe----CCeE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTHV 747 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~~ 747 (905)
++|.+.+.||.|+||.||+|.+..++..||+|.+..... .......+.+|+.+++.++||||++++++|.. ...+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 689999999999999999999999999999999876422 22345667789999999999999999998763 3578
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 99999994 6898888654 34899999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
... ........+++..|+|||.+.. ..++|+|||||++|+|++|+.||.
T Consensus 161 ~~~-----------------------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~ 213 (334)
T cd07855 161 PTE-----------------------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFP 213 (334)
T ss_pred CcC-----------------------CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccC
Confidence 110 0111234578999999999753 458999999999999999999994
No 331
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-28 Score=289.21 Aligned_cols=206 Identities=20% Similarity=0.295 Sum_probs=173.1
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCe-----EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~-----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 743 (905)
+.....++...||+|.||.||.|....... .||+|.+++. .+..+...|.+|..+|+.++||||+++++++.+
T Consensus 689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~ 766 (1025)
T KOG1095|consen 689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD 766 (1025)
T ss_pred CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC
Confidence 456678889999999999999999765433 4888888754 567788999999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEec
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQP-----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DF 818 (905)
....+|++|||+||+|..+|+..+ ...++....+.++.+|+.|+.||+++++|||||..+|+||+....+||+||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEccc
Confidence 999999999999999999998651 345888999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---CCCCchHHHHHHHHHHHH-hC
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---AYTRMTRYNYLILVSKKF-ME 894 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---~~~~sDiwSlGvil~ell-tg 894 (905)
|+|+.+...... .......-...|||||.+. .++++|||||||+|||+| .|
T Consensus 847 GlArDiy~~~yy-------------------------r~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG 901 (1025)
T KOG1095|consen 847 GLARDIYDKDYY-------------------------RKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLG 901 (1025)
T ss_pred chhHhhhhchhe-------------------------eccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCC
Confidence 999854322111 0111112335899999998 367999999999999999 57
Q ss_pred CCCchhh
Q 002580 895 FQPFPIL 901 (905)
Q Consensus 895 ~~PF~~~ 901 (905)
..||+..
T Consensus 902 ~~PY~~~ 908 (1025)
T KOG1095|consen 902 ATPYPSR 908 (1025)
T ss_pred CCCCCCc
Confidence 9999753
No 332
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.95 E-value=8.3e-28 Score=262.52 Aligned_cols=199 Identities=23% Similarity=0.301 Sum_probs=164.6
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCL 749 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~l 749 (905)
.++|...+.||+|+||.||++.+..++..+|+|.+..... ......+..|+.++.++. |+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD--EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC--hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 3567788899999999999999999999999999875422 244567888999999985 9999999999999999999
Q ss_pred EEeccCCCCHHHHH---hhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 750 ITDYCPGGELFLLL---DRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 750 V~E~~~gg~L~~~l---~~~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
+|||+. ++|.++. .......+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 81 CMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred EEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 999984 4555443 222335699999999999999999999975 99999999999999999999999999985432
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHHhCCCCch
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. .......|++.|+|||++.+ ..++|+|||||++|+|++|+.||.
T Consensus 160 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 211 (288)
T cd06616 160 DS----------------------------IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYP 211 (288)
T ss_pred cC----------------------------CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCch
Confidence 11 01123358889999999863 348999999999999999999996
Q ss_pred h
Q 002580 900 I 900 (905)
Q Consensus 900 ~ 900 (905)
.
T Consensus 212 ~ 212 (288)
T cd06616 212 K 212 (288)
T ss_pred h
Confidence 4
No 333
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.95 E-value=2.2e-27 Score=259.06 Aligned_cols=198 Identities=24% Similarity=0.376 Sum_probs=172.1
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.+.|.+...||+|++|.||++.+..++..+++|++..... ....+..|+++++.++|+||+++++++...+..|++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 4579999999999999999999988899999999975422 456788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
+||+++++|.+++.... ..++...+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-- 170 (286)
T cd06614 94 MEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-- 170 (286)
T ss_pred EeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch--
Confidence 99999999999998753 369999999999999999999999999999999999999999999999999875432110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......+++.|+|||.+.+ ..++|+||||+++|+|++|..||..
T Consensus 171 -------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~ 218 (286)
T cd06614 171 -------------------------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLR 218 (286)
T ss_pred -------------------------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCC
Confidence 01123457889999999874 4589999999999999999999853
No 334
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=1.3e-27 Score=267.53 Aligned_cols=202 Identities=24% Similarity=0.362 Sum_probs=167.6
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC--CeE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK--THV 747 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~--~~~ 747 (905)
.++|.+.+.||+|+||.||+|.+..++..+|+|.+.+.. ........+.+|+.+++++ +|+||++++++|... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAF-RNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeecccc-CcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 468999999999999999999998899999999886532 2333445677899999999 999999999988643 468
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||+. ++|..++... .+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~ 160 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSEL 160 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccc
Confidence 99999996 5999888653 5888899999999999999999999999999999999999999999999998754322
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.... .......+.||+.|+|||.+.+ ..++|+||||+++|+|++|+.||.
T Consensus 161 ~~~~----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~ 214 (337)
T cd07852 161 EENP----------------------ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFP 214 (337)
T ss_pred cccc----------------------cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCC
Confidence 1100 0011234578999999998863 358999999999999999999995
No 335
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.95 E-value=2.6e-27 Score=256.07 Aligned_cols=194 Identities=15% Similarity=0.206 Sum_probs=155.1
Q ss_pred cccccCceEEEEEEEcCC--CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCC
Q 002580 679 PLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPG 756 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~~~t--~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~g 756 (905)
.||+|+||.||++..... ...+++|.+... ........+.+|+.+++.++||||+++++++.+....|+||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN--ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC--CChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 689999999999975433 234566766543 1234456788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCc
Q 002580 757 GELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (905)
Q Consensus 757 g~L~~~l~~~~--~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~ 834 (905)
++|.+++.+.. ...++...+..++.||+.||.|||+++++||||||+|||++.++.++|+|||++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~----- 154 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY----- 154 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchh-----
Confidence 99999997642 23466777889999999999999999999999999999999999999999998753211100
Q ss_pred chhhhccccCCCCcccccccccccccccCCccccccccccC----------CCCchHHHHHHHHHHHHh-CCCCch
Q 002580 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----------YTRMTRYNYLILVSKKFM-EFQPFP 899 (905)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----------~~~sDiwSlGvil~ellt-g~~PF~ 899 (905)
.......+++..|+|||++.. +.++|+|||||++|+|++ |..||.
T Consensus 155 --------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~ 210 (268)
T cd05086 155 --------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS 210 (268)
T ss_pred --------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence 011224568899999999752 358999999999999996 577884
No 336
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=2.1e-27 Score=258.14 Aligned_cols=193 Identities=24% Similarity=0.388 Sum_probs=161.1
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC--CeEEEE
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK--THVCLI 750 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~--~~~~lV 750 (905)
|++.+.||+|+||.||++.+..++..||+|.+++... .... .....|+.++.++. |+||+++++++.+. +.+++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~~~~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-SLEQ-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-Cchh-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 6788999999999999999999999999999876422 2222 23457888888884 99999999999987 899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|||++ ++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++. +.+||+|||++.......
T Consensus 79 ~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~-- 153 (282)
T cd07831 79 FELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP-- 153 (282)
T ss_pred EecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC--
Confidence 99996 58888876543 45899999999999999999999999999999999999999 999999999986543111
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+++.|+|||.+.. ..++|+|||||++|+|++|..||.
T Consensus 154 --------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~ 200 (282)
T cd07831 154 --------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFP 200 (282)
T ss_pred --------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCC
Confidence 1122457889999997642 458999999999999999999995
No 337
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=4.3e-27 Score=260.47 Aligned_cols=194 Identities=26% Similarity=0.361 Sum_probs=166.6
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|...+.||+|+||.||+|.+..++..|++|.+.............+..|+.+++.++|||++++++++.+....|+||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66778899999999999999999999999998765444445556788899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+. ++|.+++.... ..+++..+..++.||+.+|.|||++||+|+||+|+||+++.++.++|+|||++....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------- 172 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS-------- 172 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC--------
Confidence 95 57777776543 458999999999999999999999999999999999999999999999999874321
Q ss_pred cchhhhccccCCCCcccccccccccccccCCcccccccccc------CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF------AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~------~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......|+..|+|||++. ...++|+|||||++|+|++|..||..
T Consensus 173 -----------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~ 222 (313)
T cd06633 173 -----------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 222 (313)
T ss_pred -----------------------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 112346888999999984 24488999999999999999999853
No 338
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.95 E-value=1.6e-27 Score=255.41 Aligned_cols=187 Identities=16% Similarity=0.190 Sum_probs=157.0
Q ss_pred ccccccCceEEEEEEEcCCC----------eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 678 KPLGSGDTGSVHLVELCGSG----------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~----------~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
+.||+|+||.||++.+..++ ..+++|.+.... .....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~----~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH----RDSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch----hhHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999998776 357788765431 115678889999999999999999999888 778
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC-------cEEEEeccC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-------HVSLTDFDL 820 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~-------~vkL~DFG~ 820 (905)
++||||+++++|.+++..... .++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999999987542 589999999999999999999999999999999999999887 799999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHh-C
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFM-E 894 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~ellt-g 894 (905)
+..... .....++..|+|||++.+ ..++|+|||||++|+|++ |
T Consensus 155 a~~~~~-------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 155 PITVLS-------------------------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred cccccc-------------------------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCC
Confidence 865321 112346678999999874 348999999999999999 5
Q ss_pred CCCchhh
Q 002580 895 FQPFPIL 901 (905)
Q Consensus 895 ~~PF~~~ 901 (905)
..||...
T Consensus 204 ~~p~~~~ 210 (259)
T cd05037 204 EEPLSTL 210 (259)
T ss_pred CCCcccC
Confidence 8888544
No 339
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.95 E-value=1.7e-27 Score=267.31 Aligned_cols=194 Identities=25% Similarity=0.368 Sum_probs=166.1
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 745 (905)
.++|++++.||+|+||.||++.+..++..||+|.+.... ........+.+|+.+++.++|+||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 568999999999999999999999999999999986542 23334456788999999999999999999987653
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 746 -~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
.+|+||+|+ +++|..++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 469999999 7899888764 34899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. ......+++.|+|||.+.+ ..++|+|||||++|+|++|..||.
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~ 217 (343)
T cd07880 169 DS------------------------------EMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFK 217 (343)
T ss_pred cc------------------------------CccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 21 1123457889999999864 358999999999999999999995
No 340
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.95 E-value=1.6e-27 Score=259.26 Aligned_cols=203 Identities=22% Similarity=0.299 Sum_probs=168.2
Q ss_pred CCCeeecccccccCceEEEEEEEc----CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe--C
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELC----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT--K 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~----~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~--~ 744 (905)
..+|++.+.||+|+||.||++... .++..+|+|.+...... .....+.+|+.+++.+.|+||+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 457889999999999999999864 34789999998765321 356778999999999999999999999877 5
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...+++|||+++++|.+++.... ..++...+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 68999999999999999997653 24899999999999999999999999999999999999999999999999998664
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...... ........++..|+|||.+.. ..++|+|||||++|+|++|..||..
T Consensus 160 ~~~~~~------------------------~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~ 214 (284)
T cd05038 160 PEDKDY------------------------YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQS 214 (284)
T ss_pred ccCCcc------------------------eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCccc
Confidence 311110 001112245567999998873 4589999999999999999999854
No 341
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.95 E-value=2.9e-27 Score=286.56 Aligned_cols=151 Identities=39% Similarity=0.653 Sum_probs=139.5
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
+++|.+++.||.|+||.||+|.+..+++.||||+++............+..|+.++..++|+||+++++++...+.+|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999876555566667889999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
|||+.|++|.+++... ..+++..++.|+.||+.||.|||++||+||||||+||||+.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~--~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY--GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999764 3488999999999999999999999999999999999999999999999999874
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=1.1e-27 Score=268.20 Aligned_cols=197 Identities=25% Similarity=0.397 Sum_probs=166.9
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC-----Ce
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----TH 746 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~~ 746 (905)
++|.+.+.||.|+||.||++.+..++..||+|.+..... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD-NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc-ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 579999999999999999999999999999999876422 233345677899999999999999999988644 35
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
.|+++||+ +++|.+++... ..+++..+..++.||+.||.|||+++++||||||+||+++.++.+||+|||++.....
T Consensus 84 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 84 VYIVYELM-DTDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred EEEEEeCC-CCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 89999999 57898888764 4599999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. .......++..|+|||.+.. ..++|+|||||++|+|++|+.||.
T Consensus 161 ~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~ 210 (337)
T cd07858 161 KG---------------------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP 210 (337)
T ss_pred Cc---------------------------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence 11 11223467889999998763 459999999999999999999995
No 343
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=3.5e-27 Score=251.95 Aligned_cols=200 Identities=29% Similarity=0.490 Sum_probs=173.6
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|.+.+.||.|+||.||++.+..++..|++|.+..... .......+..|+++++.++|+|++++++.+......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 58899999999999999999998999999999876532 33556678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 753 YCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|+++++|.+++.... ...++...+..++.+++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 157 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-- 157 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc--
Confidence 999999999998643 3569999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......|++.|+|||.+.+ ..++|+||+|+++|+|++|..||..
T Consensus 158 -------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 205 (258)
T cd08215 158 -------------------------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEG 205 (258)
T ss_pred -------------------------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCC
Confidence 01223468899999998874 4589999999999999999999854
No 344
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.95 E-value=4.1e-27 Score=250.27 Aligned_cols=197 Identities=29% Similarity=0.454 Sum_probs=172.2
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|.+.+.||+|++|.||++.+..++..+++|.+..... .....+.+|+.+++.++|+||+++++++..+...++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 47888999999999999999988999999999876532 355678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++.... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---- 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK---- 152 (253)
T ss_pred cCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccc----
Confidence 999999999987643 458999999999999999999999999999999999999999999999999986543110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
......++..|+|||.+.+ ..++|+||||+++|+|++|..||...
T Consensus 153 ------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 153 ------------------------ARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred ------------------------cccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 0234568899999999874 45899999999999999999999643
No 345
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=2e-27 Score=258.66 Aligned_cols=197 Identities=23% Similarity=0.334 Sum_probs=167.2
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEEE
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLIT 751 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lV~ 751 (905)
|.+.+.||.|++|.||+|.+..++..+|+|.+.... ........+.+|+.+++.++|+|++++++++... +..|+||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 678899999999999999999999999999998653 2333445678899999999999999999999987 8999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||++ ++|..++.... ..+++..++.++.||+.||.|||++|++|+||||+||++++++.++|+|||++........
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 80 EYMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred cccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9996 58888886542 4689999999999999999999999999999999999999999999999999865432110
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......++..|+|||.+.+ ..++|+||||+++|+|++|+.||.
T Consensus 156 ------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~ 203 (287)
T cd07840 156 ------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQ 203 (287)
T ss_pred ------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCC
Confidence 01122356788999998763 458999999999999999999995
No 346
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-29 Score=251.98 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=167.3
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEEeCCe
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM-LDHPFVPALYASFQTKTH 746 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~~~~ 746 (905)
.|..++.+-+..||.|.||+|++..++.+|+..|||.+.... ...+..+++.|.+...+ -+.||||++|+.....+.
T Consensus 60 ~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n--~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGd 137 (361)
T KOG1006|consen 60 TFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNN--IEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGD 137 (361)
T ss_pred ccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeecc--chHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc
Confidence 456677788899999999999999999999999999998653 34566778888876544 579999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEcCCCcEEEEeccCcc
Q 002580 747 VCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~~~~~vkL~DFG~s~ 822 (905)
.||.||+| ..+|..+.+. -.+..+++..+-.|....+.||.||-.. .|+|||+||+|||++..|.+||||||+|-
T Consensus 138 cWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcG 216 (361)
T KOG1006|consen 138 CWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICG 216 (361)
T ss_pred eeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchH
Confidence 99999999 5677665542 2345699999999999999999999865 89999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----C-CCchHHHHHHHHHHHHhCCCC
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----Y-TRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~-~~sDiwSlGvil~elltg~~P 897 (905)
.+-.+ ...+--+|-..|||||-+.. | -+||+||||++|||+.||.+|
T Consensus 217 qLv~S----------------------------iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fP 268 (361)
T KOG1006|consen 217 QLVDS----------------------------IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFP 268 (361)
T ss_pred hHHHH----------------------------HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCC
Confidence 53211 11223467889999999983 2 389999999999999999999
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 269 yr~ 271 (361)
T KOG1006|consen 269 YRK 271 (361)
T ss_pred cch
Confidence 953
No 347
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.95 E-value=5.6e-27 Score=250.20 Aligned_cols=198 Identities=24% Similarity=0.345 Sum_probs=173.2
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|.+.+.||+|++|.||++.+..+++.|++|.+..... .......+.+|++++..++|+|++++++++.+.+..+++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKI-KEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccccc-CHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 58889999999999999999998999999999987633 23456788999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 154 (254)
T cd06627 80 YAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK--- 154 (254)
T ss_pred cCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc---
Confidence 99999999999765 4589999999999999999999999999999999999999999999999999866432111
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......++..|+|||.+.+ ..++|+||||+++|+|++|..||..
T Consensus 155 ------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~ 201 (254)
T cd06627 155 ------------------------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYD 201 (254)
T ss_pred ------------------------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 1223468889999999874 4589999999999999999999853
No 348
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.95 E-value=3.6e-27 Score=251.80 Aligned_cols=194 Identities=23% Similarity=0.309 Sum_probs=162.1
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCC
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGG 757 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg 757 (905)
+.||.|+||.||++.+.. ++.|++|.+..... ......+..|+.+++.++|+||+++++++......|+||||+.++
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 77 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLP--PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGG 77 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCC
Confidence 468999999999999977 99999998876432 235567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchh
Q 002580 758 ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNE 837 (905)
Q Consensus 758 ~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~ 837 (905)
+|.+++.... ..++...+..++.+++.+|.|||+++++||||||+|||++.++.++|+|||++.........
T Consensus 78 ~l~~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~------- 149 (251)
T cd05041 78 SLLTFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT------- 149 (251)
T ss_pred cHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce-------
Confidence 9999987643 35788999999999999999999999999999999999999999999999998653211000
Q ss_pred hhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCCchh
Q 002580 838 KKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQPFPI 900 (905)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~PF~~ 900 (905)
........+..|+|||.+.+ ..++|+|||||++|+|++ |..||..
T Consensus 150 ------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~ 198 (251)
T cd05041 150 ------------------VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPG 198 (251)
T ss_pred ------------------eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCcc
Confidence 00011234567999999873 458999999999999998 8999853
No 349
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.95 E-value=8.3e-29 Score=261.15 Aligned_cols=195 Identities=19% Similarity=0.287 Sum_probs=168.7
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC--CC----CcceEEEEEEeC
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HP----FVPALYASFQTK 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~--h~----nIv~l~~~~~~~ 744 (905)
.++|.+++.+|+|.||.|..|.+..++..||||+++.- ....+..+-|+++|.++. .| -++++.++|...
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V----~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV----DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH----HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 67899999999999999999999999999999998742 223456678999999983 22 278888899999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC---------------
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--------------- 809 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~--------------- 809 (905)
+++|||+|.+ |.++++++..+...+++...++.|+.|++.+++|||+.+++|-||||+|||+.+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~ 242 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF 242 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence 9999999999 889999999988889999999999999999999999999999999999999831
Q ss_pred -----CCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchH
Q 002580 810 -----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTR 881 (905)
Q Consensus 810 -----~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDi 881 (905)
+..++|+|||.|+... ......+.|..|.|||++.+ +.++|+
T Consensus 243 ~r~~ks~~I~vIDFGsAtf~~------------------------------e~hs~iVsTRHYRAPEViLgLGwS~pCDv 292 (415)
T KOG0671|consen 243 IRPLKSTAIKVIDFGSATFDH------------------------------EHHSTIVSTRHYRAPEVILGLGWSQPCDV 292 (415)
T ss_pred eccCCCcceEEEecCCcceec------------------------------cCcceeeeccccCCchheeccCcCCccCc
Confidence 2248999999996532 11245689999999999994 779999
Q ss_pred HHHHHHHHHHHhCCCCchh
Q 002580 882 YNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 882 wSlGvil~elltg~~PF~~ 900 (905)
||+||||+||++|...|+.
T Consensus 293 WSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 293 WSIGCILVELYTGETLFQT 311 (415)
T ss_pred eeeeeEEEEeeccceeccc
Confidence 9999999999999998863
No 350
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.95 E-value=1.5e-27 Score=257.46 Aligned_cols=196 Identities=22% Similarity=0.267 Sum_probs=160.8
Q ss_pred ccccccCceEEEEEEEcCCC------eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 678 KPLGSGDTGSVHLVELCGSG------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~------~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
+.||+|+||.||+|...... ..+++|.+.+.. .......+.+|+.+++.++||||+++++++...+..|++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 36899999999999986544 689999886542 2234567888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC-----cEEEEeccCc
Q 002580 752 DYCPGGELFLLLDRQP-----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-----HVSLTDFDLS 821 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~-----~vkL~DFG~s 821 (905)
||+++++|.+++.... ...+++..+..++.||+.||.|||+++++|+||||+||+++.++ .++|+|||++
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~ 158 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLA 158 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccc
Confidence 9999999999997532 23478899999999999999999999999999999999999877 8999999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQP 897 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~P 897 (905)
........ ........++..|+|||.+.+ ..++|+|||||++|+|++ |..|
T Consensus 159 ~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p 213 (269)
T cd05044 159 RDIYKSDY-------------------------YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP 213 (269)
T ss_pred cccccccc-------------------------cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCC
Confidence 65431110 001112345678999999874 458999999999999998 9999
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 214 ~~~ 216 (269)
T cd05044 214 YPA 216 (269)
T ss_pred Ccc
Confidence 863
No 351
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.95 E-value=3.2e-27 Score=261.30 Aligned_cols=196 Identities=21% Similarity=0.239 Sum_probs=161.6
Q ss_pred CceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCHHHHH
Q 002580 684 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 763 (905)
Q Consensus 684 ~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l 763 (905)
+++.||.+....+++.||+|.+.... ........+..|+.+++.++|+||++++++|...+..|++|||+++++|.+++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~-~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDS-CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccc-cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 45666777777799999999997652 24456678999999999999999999999999999999999999999999999
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhcccc
Q 002580 764 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 843 (905)
Q Consensus 764 ~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~ 843 (905)
.......+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+|||.+..........
T Consensus 91 ~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~------------ 158 (314)
T cd08216 91 KTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQ------------ 158 (314)
T ss_pred HHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccc------------
Confidence 87555568999999999999999999999999999999999999999999999999886543111100
Q ss_pred CCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 844 GQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...........++..|+|||++.. ..++|+|||||++|+|++|..||..
T Consensus 159 --------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~ 212 (314)
T cd08216 159 --------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKD 212 (314)
T ss_pred --------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence 001112234567889999999863 3589999999999999999999964
No 352
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.95 E-value=4.2e-27 Score=252.97 Aligned_cols=196 Identities=19% Similarity=0.240 Sum_probs=156.0
Q ss_pred ccccccCceEEEEEEEcC---CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE-eCCeEEEEEec
Q 002580 678 KPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVCLITDY 753 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~---t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~lV~E~ 753 (905)
+.||+|+||.||+|.+.. .+..+|+|.+... ........+.+|+.+++.++||||+++++++. .++..+++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 368999999999998754 3467999987532 23445677888999999999999999999765 45678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+.+++|.+++.... ..++...+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++........
T Consensus 79 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~--- 154 (262)
T cd05058 79 MKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY--- 154 (262)
T ss_pred CCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcce---
Confidence 99999999997643 33677788889999999999999999999999999999999999999999998653311100
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhC-CCCch
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFME-FQPFP 899 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg-~~PF~ 899 (905)
.........+++.|+|||.+.+ ..++|+|||||++|+|++| .+||.
T Consensus 155 --------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~ 204 (262)
T cd05058 155 --------------------SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP 204 (262)
T ss_pred --------------------eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCC
Confidence 0011123346778999998863 4589999999999999994 66665
No 353
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.95 E-value=3e-27 Score=263.50 Aligned_cols=195 Identities=23% Similarity=0.381 Sum_probs=165.8
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-CCeEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-KTHVC 748 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-~~~~~ 748 (905)
..++|.+.+.||.|+||.||+|.+..++..||+|.+.+.. ........+..|+.+++.++||||++++++|.. ....|
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 86 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF-STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY 86 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc-cccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence 3568999999999999999999999999999999886542 223344667789999999999999999999875 56799
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++|||+ +++|..++.. ..+++..+..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++.....
T Consensus 87 lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~-- 160 (328)
T cd07856 87 FVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP-- 160 (328)
T ss_pred EEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC--
Confidence 999999 6789888764 3478888999999999999999999999999999999999999999999999854210
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+++.|+|||.+.+ ..++|+|||||++|+|++|+.||.
T Consensus 161 ----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~ 207 (328)
T cd07856 161 ----------------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFP 207 (328)
T ss_pred ----------------------------CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 1123467889999998753 458999999999999999999995
No 354
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=2.3e-27 Score=260.73 Aligned_cols=202 Identities=23% Similarity=0.304 Sum_probs=166.9
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC----
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 745 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~---- 745 (905)
..++|++.+.||.|+||.||+|.+..+++.||+|.++.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNE-KEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccc-ccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35789999999999999999999999999999999875422 2223345678999999999999999999887654
Q ss_pred ------eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEecc
Q 002580 746 ------HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 819 (905)
Q Consensus 746 ------~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG 819 (905)
.+|+|+||+++ +|..++... ...+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg 161 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG 161 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccc
Confidence 79999999965 777777654 3458999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCC
Q 002580 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEF 895 (905)
Q Consensus 820 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~ 895 (905)
++........ .......+++.|+|||.+.+ ..++|+|||||++|+|++|+
T Consensus 162 ~~~~~~~~~~--------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~ 215 (302)
T cd07864 162 LARLYNSEES--------------------------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKK 215 (302)
T ss_pred ccccccCCcc--------------------------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCC
Confidence 9865431110 01112346788999998863 45899999999999999999
Q ss_pred CCchh
Q 002580 896 QPFPI 900 (905)
Q Consensus 896 ~PF~~ 900 (905)
+||..
T Consensus 216 ~~~~~ 220 (302)
T cd07864 216 PIFQA 220 (302)
T ss_pred CCCCC
Confidence 99963
No 355
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.95 E-value=2.7e-28 Score=287.61 Aligned_cols=208 Identities=26% Similarity=0.339 Sum_probs=165.8
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 743 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------- 743 (905)
..+|+.+..||+||||.||+|+++-+|+.||||.++... .......+.+|+.+|.+|+|||||++|..|..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 467889999999999999999999999999999998653 55667788999999999999999999864410
Q ss_pred ------------------------------------------------C-------------------------------
Q 002580 744 ------------------------------------------------K------------------------------- 744 (905)
Q Consensus 744 ------------------------------------------------~------------------------------- 744 (905)
.
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 002580 745 ---------------------------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH 791 (905)
Q Consensus 745 ---------------------------------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH 791 (905)
-.+||-||||+..+|.+++.++... -....++.++++|+.||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHHHHHHH
Confidence 1368999999988888888775321 146788999999999999999
Q ss_pred HCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC----CCCCCCCcchhhhccccCCCCcccccccccccccccCCccc
Q 002580 792 CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC----KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 867 (905)
Q Consensus 792 ~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y 867 (905)
++|||||||||.|||+++++.|||+|||+++.... ......+.+ ..-..+....+..+||.-|
T Consensus 715 ~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~-------------~~~g~~~~~~Ts~VGTalY 781 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFST-------------NRAGSNDGDLTSQVGTALY 781 (1351)
T ss_pred hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccc-------------cccCCCCcccccccceeee
Confidence 99999999999999999999999999999977321 111100000 0011122345678999999
Q ss_pred cccccccC------CCCchHHHHHHHHHHHHhC
Q 002580 868 IAPVSDFA------YTRMTRYNYLILVSKKFME 894 (905)
Q Consensus 868 ~APE~l~~------~~~sDiwSlGvil~elltg 894 (905)
+|||++.+ +.|+|+||||+++|||+.-
T Consensus 782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yP 814 (1351)
T KOG1035|consen 782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYP 814 (1351)
T ss_pred ecHHHhcccccccccchhhhHHHHHHHHHHhcc
Confidence 99999983 3499999999999999964
No 356
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=4e-27 Score=262.98 Aligned_cols=201 Identities=20% Similarity=0.289 Sum_probs=164.3
Q ss_pred CeeecccccccCceEEEEEEEcCC--CeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe----CC
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGS--GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT----KT 745 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t--~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~----~~ 745 (905)
+|.+.+.||+|+||.||++.+..+ +..||+|.+.... ........+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF-SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc-ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 488999999999999999999888 8899999987532 2233355678899999998 59999999987542 24
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
.+|++++|+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~ 156 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS 156 (332)
T ss_pred cEEEEEecc-cCCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence 688999998 47899888654 458999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
..... .........||+.|+|||.+.+ ..++|+|||||++|+|++|.+||..
T Consensus 157 ~~~~~-----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~ 212 (332)
T cd07857 157 ENPGE-----------------------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKG 212 (332)
T ss_pred ccccc-----------------------ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCC
Confidence 21110 0111234578999999998753 4589999999999999999999953
No 357
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.95 E-value=4.1e-27 Score=258.05 Aligned_cols=193 Identities=25% Similarity=0.387 Sum_probs=165.3
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|.....||+|+||.||++....++..||+|.+... .......+.+|+.+++.++|+||+++++++...+..|++|||
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 98 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR---KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 98 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc---chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEec
Confidence 33446799999999999999999999999987543 233456688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+++++|.+++.. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~----- 170 (292)
T cd06657 99 LEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 170 (292)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-----
Confidence 999999998754 248899999999999999999999999999999999999999999999999875432110
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......|++.|+|||.+.+ ..++|+||||+++|+|++|..||.
T Consensus 171 ----------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~ 217 (292)
T cd06657 171 ----------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 217 (292)
T ss_pred ----------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11123468899999999874 458999999999999999999985
No 358
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.95 E-value=2.7e-27 Score=261.09 Aligned_cols=210 Identities=23% Similarity=0.286 Sum_probs=166.9
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
.++|.+.+.||.|+||.||+|.+..+++.+|+|.+....... .....+.+|+++++.++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD-GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC-CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 579999999999999999999999999999999987543211 1223567899999999999999999887543
Q ss_pred --CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcc
Q 002580 745 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 822 (905)
Q Consensus 745 --~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~ 822 (905)
..+|+||+|+. ++|...+... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 35799999995 5777776543 3459999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCc
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF 898 (905)
........... + ............+++.|+|||.+.+ ..++|+|||||++|+|++|++||
T Consensus 164 ~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~ 227 (311)
T cd07866 164 PYDGPPPNPKG--------------G--GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPIL 227 (311)
T ss_pred hccCCCccccc--------------C--CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCC
Confidence 64322111000 0 0001112234577899999998763 35899999999999999999998
Q ss_pred h
Q 002580 899 P 899 (905)
Q Consensus 899 ~ 899 (905)
.
T Consensus 228 ~ 228 (311)
T cd07866 228 Q 228 (311)
T ss_pred C
Confidence 5
No 359
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.95 E-value=7.6e-27 Score=249.26 Aligned_cols=201 Identities=26% Similarity=0.347 Sum_probs=174.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC--CeEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK--THVCLI 750 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~--~~~~lV 750 (905)
+|.+.+.||+|++|.||+|.+..++..+++|.+..... .......+.+|+.++++++|+||+++++.+... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGD-SEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeecccc-chHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 47888999999999999999998999999999876532 245567889999999999999999999999988 899999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
+||+++++|.+++.... .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+.........
T Consensus 80 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 99999999999998754 6899999999999999999999999999999999999999999999999998664322110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.......++..|+|||.+.. ..++|+||||+++|+|++|..||...
T Consensus 158 -------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (260)
T cd06606 158 -------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSEL 206 (260)
T ss_pred -------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 01234568899999999874 45899999999999999999999653
No 360
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.95 E-value=4.5e-27 Score=254.40 Aligned_cols=201 Identities=22% Similarity=0.251 Sum_probs=162.1
Q ss_pred eeecccccccCceEEEEEEEc---CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----
Q 002580 674 FRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 745 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~---~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 745 (905)
|.+.+.||+|+||.||+|.+. .++..+|+|.+.... ......+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI-FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc-CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 677889999999999999864 357899999987653 33445677889999999999999999999886432
Q ss_pred -eEEEEEeccCCCCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 746 -HVCLITDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 746 -~~~lV~E~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
..+++++|+.+++|..++.... ...++...+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~ 159 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGL 159 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccc
Confidence 3578999999999988875321 12478889999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh-CCC
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM-EFQ 896 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt-g~~ 896 (905)
+........ ........+++.|++||.+.. ..++|+|||||++|+|++ |.+
T Consensus 160 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~ 214 (273)
T cd05074 160 SKKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214 (273)
T ss_pred cccccCCcc-------------------------eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCC
Confidence 865431111 001112345678999999873 458999999999999999 899
Q ss_pred Cchh
Q 002580 897 PFPI 900 (905)
Q Consensus 897 PF~~ 900 (905)
||..
T Consensus 215 p~~~ 218 (273)
T cd05074 215 PYAG 218 (273)
T ss_pred CCCC
Confidence 9853
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=5e-27 Score=259.35 Aligned_cols=196 Identities=24% Similarity=0.347 Sum_probs=167.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
..|...+.||.|+||.||++.+..++..+++|.+.............+..|+.+++.++|+|++++++++......|+||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 35888899999999999999999999999999987543334445567888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
||+. ++|.+++.... ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus 95 e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~----- 167 (308)
T cd06634 95 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP----- 167 (308)
T ss_pred EccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC-----
Confidence 9995 68877775443 4589999999999999999999999999999999999999999999999999854320
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCcccccccccc------CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF------AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~------~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....+++.|+|||.+. ...++|+|||||++|+|++|..||..
T Consensus 168 --------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 216 (308)
T cd06634 168 --------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFN 216 (308)
T ss_pred --------------------------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCcc
Confidence 12346888999999974 24589999999999999999999853
No 362
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.95 E-value=6.5e-27 Score=254.79 Aligned_cols=197 Identities=22% Similarity=0.339 Sum_probs=164.3
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC---CCCCcceEEEEEEeCCe----
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQTKTH---- 746 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~~~~---- 746 (905)
|++.+.||.|+||.||++.+..++..||+|.+..... .......+.+|+.+++.+ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS-EEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc-cchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 6788999999999999999988899999999975432 222234556677777665 69999999999988776
Q ss_pred -EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 747 -VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 747 -~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
++++|||+. ++|.+++.......+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 999999996 589998877554568999999999999999999999999999999999999999999999999986542
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
... ......+++.|+|||.+.+ ..++|+|||||++|+|++|.+||..
T Consensus 159 ~~~----------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~ 208 (287)
T cd07838 159 FEM----------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRG 208 (287)
T ss_pred CCc----------------------------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccC
Confidence 110 1122357889999999874 4589999999999999999999864
No 363
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=4e-27 Score=257.22 Aligned_cols=199 Identities=38% Similarity=0.600 Sum_probs=167.1
Q ss_pred CeeecccccccCceEEEEEEEc---CCCeEEEEEEeeccccc-CHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~---~t~~~vavK~~~~~~~~-~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 747 (905)
+|.+.+.||+|++|.||++.+. .++..||+|.+++.... .......+..|+.++..+ +|+||+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4888999999999999999864 45788999998754322 223345678899999999 699999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+||||+.+++|.+++... ..+++..+..++.|++.+|.|||+.|++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999998764 34899999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. .......|++.|+|||.+.+ ..++|+||||+++|+|++|..||.
T Consensus 159 ~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 159 EE--------------------------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred cc--------------------------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 10 11223468899999999863 348999999999999999999995
No 364
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.95 E-value=3.3e-27 Score=256.80 Aligned_cols=196 Identities=27% Similarity=0.412 Sum_probs=166.8
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEe
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~E 752 (905)
|.+.+.||.|++|.||+|....+++.|++|.+..... . .......+|+..+..++ |+||+++++++.+++..|+|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFY-S-WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhcc-c-hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 6788999999999999999988999999999875422 1 12233456888999998 9999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 832 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~ 832 (905)
|+ +++|.+++.......+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~---- 153 (283)
T cd07830 79 YM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP---- 153 (283)
T ss_pred cC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC----
Confidence 99 8899998877654568999999999999999999999999999999999999999999999999986532110
Q ss_pred CcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 833 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......++..|+|||++.. ..++|+||||+++|+|++|++||+.
T Consensus 154 ------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~ 201 (283)
T cd07830 154 ------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPG 201 (283)
T ss_pred ------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCC
Confidence 1123467889999998853 4589999999999999999999953
No 365
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=6.4e-27 Score=256.84 Aligned_cols=202 Identities=26% Similarity=0.361 Sum_probs=166.6
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 745 (905)
..+..++|.+.+.||+|+||.||+|.+..+++.||+|.+++.. .......+..|+.++..+ .|+||+++++++.+..
T Consensus 10 ~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~ 87 (296)
T cd06618 10 YPADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTG--NKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS 87 (296)
T ss_pred ccCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccC--ChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence 3456789999999999999999999998889999999997642 222344566677766666 5999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..|++|||+ +++|..++.... ..+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++...
T Consensus 88 ~~~~v~e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~ 165 (296)
T cd06618 88 DVFICMELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRL 165 (296)
T ss_pred eEEEEeecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhc
Confidence 999999998 457777776533 368999999999999999999997 59999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-------CCCchHHHHHHHHHHHHhCCCC
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA-------YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~-------~~~sDiwSlGvil~elltg~~P 897 (905)
.... ......+++.|+|||.+.+ ..++|+||||+++|+|++|+.|
T Consensus 166 ~~~~----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p 217 (296)
T cd06618 166 VDSK----------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFP 217 (296)
T ss_pred cCCC----------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCC
Confidence 2110 0112357889999999873 3489999999999999999999
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 218 ~~~ 220 (296)
T cd06618 218 YKN 220 (296)
T ss_pred CCc
Confidence 964
No 366
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=5.4e-27 Score=250.79 Aligned_cols=197 Identities=27% Similarity=0.426 Sum_probs=170.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+|++.+.||.|+||.||++.+..++..+++|.+..... .......+..|+.+++.++|+||+++++++.+....|+|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM-SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc-cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 58899999999999999999999999999999876533 33445677889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 753 YCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 753 ~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
|+++++|..++.+. ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~--- 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN--- 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---
Confidence 99999999998762 2245889999999999999999999999999999999999999999999999998654311
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+++.|+|||.+.+ ..++|+||||+++|+|++|+.||.
T Consensus 157 --------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~ 202 (256)
T cd08530 157 --------------------------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202 (256)
T ss_pred --------------------------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1112357889999999874 348999999999999999999985
No 367
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.95 E-value=7.3e-27 Score=248.99 Aligned_cols=192 Identities=42% Similarity=0.711 Sum_probs=168.5
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||.|+||.||.+.+..+++.+++|.+.+...........+..|+.+++.++|+||+++++.+..++..|++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 68999999999999888999999999876555555677888999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhh
Q 002580 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKK 839 (905)
Q Consensus 760 ~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~ 839 (905)
.+++.... .+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------- 147 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG----------- 147 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-----------
Confidence 99997653 48999999999999999999999999999999999999999999999999986543111
Q ss_pred ccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 840 RRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.......++..|+|||.+.+ ..++|+||||+++|++++|..||..
T Consensus 148 ----------------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~ 195 (250)
T cd05123 148 ----------------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYA 195 (250)
T ss_pred ----------------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 11234568889999999874 4589999999999999999999953
No 368
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95 E-value=4.3e-27 Score=263.83 Aligned_cols=193 Identities=24% Similarity=0.369 Sum_probs=162.4
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
.++|.+.+.||+|+||.||+|.+..++..||+|.+.+... .......+.+|+.+++.++|+||++++++|...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ-SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc-cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3689999999999999999999999999999999876422 223345678899999999999999999998754
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
...|+|+||+. .+|..++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~ 167 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHA 167 (342)
T ss_pred ceEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence 34699999995 57776652 24899999999999999999999999999999999999999999999999998542
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. ......+++.|+|||.+.+ ..++|+|||||++|+|++|+.||.
T Consensus 168 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~ 216 (342)
T cd07879 168 DA------------------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216 (342)
T ss_pred CC------------------------------CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCC
Confidence 20 1123467889999999863 348999999999999999999995
No 369
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.95 E-value=8.3e-27 Score=251.85 Aligned_cols=200 Identities=23% Similarity=0.331 Sum_probs=167.2
Q ss_pred CeeecccccccCceEEEEEEEcC-CCeEEEEEEeecccc-------cCHHHHHHHHHHHHHHHh-CCCCCcceEEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM-------LNRNKVHRACAEREILDM-LDHPFVPALYASFQT 743 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~-t~~~vavK~~~~~~~-------~~~~~~~~~~~E~~il~~-l~h~nIv~l~~~~~~ 743 (905)
+|++.+.||+|+||.||++.+.. ++..+|+|.+..... ........+..|+.++.. ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 48889999999999999999987 688999998864321 123345567788888865 799999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
++..|++|||+++++|.+++... ....+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 99999999999999999887532 23458999999999999999999996 6899999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCC
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~P 897 (905)
+....... ......|+..|+|||.+.+ ..++|+||||+++|+|++|..|
T Consensus 161 ~~~~~~~~----------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p 212 (269)
T cd08528 161 AKQKQPES----------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPP 212 (269)
T ss_pred eeeccccc----------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCc
Confidence 86532110 1224468899999999985 4589999999999999999999
Q ss_pred chh
Q 002580 898 FPI 900 (905)
Q Consensus 898 F~~ 900 (905)
|..
T Consensus 213 ~~~ 215 (269)
T cd08528 213 FYS 215 (269)
T ss_pred ccc
Confidence 854
No 370
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95 E-value=3.1e-27 Score=263.42 Aligned_cols=199 Identities=22% Similarity=0.346 Sum_probs=169.1
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~ 747 (905)
+|++.+.||.|++|.||+|.+..++..||+|.+.... ........+.+|+.+++.++|+||+++++++.... .+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF-DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc-ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 5899999999999999999999899999999987642 22345567889999999999999999999988765 78
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|++|+|++ ++|.+++.... .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999996 58988887643 6999999999999999999999999999999999999999999999999998764322
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
... ........+++.|+|||.+.+ ..++|+||||+++|+|++|++||.
T Consensus 157 ~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~ 208 (330)
T cd07834 157 EDE------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP 208 (330)
T ss_pred ccc------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence 110 011233468899999999874 358999999999999999999995
No 371
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=6.8e-27 Score=261.38 Aligned_cols=213 Identities=20% Similarity=0.209 Sum_probs=168.0
Q ss_pred CCCee-ecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHH-----------HHHHHHHHHHHHHhCCCCCcceEE
Q 002580 671 LQHFR-PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----------KVHRACAEREILDMLDHPFVPALY 738 (905)
Q Consensus 671 ~~~y~-i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~-----------~~~~~~~E~~il~~l~h~nIv~l~ 738 (905)
.++|. +.+.||.|+||.||+|.+..+++.||+|.+......... ....+.+|+.+++.++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 35675 457799999999999999999999999998754322100 012467899999999999999999
Q ss_pred EEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEec
Q 002580 739 ASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 739 ~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DF 818 (905)
+++...+..|++|||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+||
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCc
Confidence 99999999999999995 6899988764 34899999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhC
Q 002580 819 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFME 894 (905)
Q Consensus 819 G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg 894 (905)
|++.....+........ ... ...........+++.|+|||.+.+ ..++|+|||||++|+|++|
T Consensus 164 g~~~~~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg 230 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSK------------DET-MQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTG 230 (335)
T ss_pred cceeecccccccccccc------------ccc-ccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhC
Confidence 99876542221100000 000 000111223457889999999874 4589999999999999999
Q ss_pred CCCch
Q 002580 895 FQPFP 899 (905)
Q Consensus 895 ~~PF~ 899 (905)
..||.
T Consensus 231 ~~p~~ 235 (335)
T PTZ00024 231 KPLFP 235 (335)
T ss_pred CCCCC
Confidence 99995
No 372
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=4.8e-27 Score=263.47 Aligned_cols=198 Identities=20% Similarity=0.306 Sum_probs=162.9
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
.++|.+.+.||.|+||.||+|.+..++..||+|.+.... ......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~---~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD---PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC---CchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 368999999999999999999999999999999987542 23456678899999999999999999776543
Q ss_pred --------CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-CCcEEE
Q 002580 745 --------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSL 815 (905)
Q Consensus 745 --------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-~~~vkL 815 (905)
...|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 81 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred ccccccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEE
Confidence 35899999996 589888764 34899999999999999999999999999999999999974 567899
Q ss_pred EeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHH
Q 002580 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKK 891 (905)
Q Consensus 816 ~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~el 891 (905)
+|||++......... ........++..|+|||.+.. ..++|+|||||++|+|
T Consensus 157 ~dfg~~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el 212 (342)
T cd07854 157 GDFGLARIVDPHYSH------------------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 212 (342)
T ss_pred CCcccceecCCcccc------------------------ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHH
Confidence 999998654311000 001122357889999998753 3489999999999999
Q ss_pred HhCCCCch
Q 002580 892 FMEFQPFP 899 (905)
Q Consensus 892 ltg~~PF~ 899 (905)
++|..||.
T Consensus 213 ~~g~~pf~ 220 (342)
T cd07854 213 LTGKPLFA 220 (342)
T ss_pred HhCCCCCC
Confidence 99999995
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.95 E-value=3.8e-27 Score=264.37 Aligned_cols=194 Identities=25% Similarity=0.408 Sum_probs=166.6
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe----
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 746 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---- 746 (905)
.++|.+.+.||+|++|.||+|.+..++..||+|.+.... ........+.+|+.+++.+.|+||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF-QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc-chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 568999999999999999999999999999999987542 223344667789999999999999999988876554
Q ss_pred --EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 747 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 747 --~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
.|+|+||+ +++|.+++.. ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 7799998875 34899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.. ......+++.|+|||.+.+ ..++|+|||||++|+|++|+.||.
T Consensus 169 ~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~ 217 (343)
T cd07851 169 DD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFP 217 (343)
T ss_pred cc------------------------------cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCC
Confidence 21 0123467889999998753 458999999999999999999995
No 374
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=7.5e-27 Score=253.77 Aligned_cols=196 Identities=24% Similarity=0.388 Sum_probs=167.0
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|.+.+.||.|++|.||+|.+..+++.+++|.+..... .......+.+|+.+++.++|+||+++++++.+++..|++|||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE-SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 6678899999999999999998999999999876532 223456778899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+++ +|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.......
T Consensus 80 ~~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 80 MDT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred cCC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 964 8888887643 458999999999999999999999999999999999999999999999999986543111
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCch
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......++..|+|||.+.+ ..++|+||||+++|+|++|+.||+
T Consensus 153 ----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~ 200 (283)
T cd05118 153 ----------------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFP 200 (283)
T ss_pred ----------------------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 01122457889999999864 358999999999999999999994
No 375
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=5.9e-27 Score=268.69 Aligned_cols=199 Identities=27% Similarity=0.389 Sum_probs=174.3
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEe-----C
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT-----K 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~-----~ 744 (905)
.+.|.+...||.|.+|.||+++.+.+++..|+|++.... ..-+.+..|.++|+.. .|||++.+|++|.. +
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~----d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE----DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc----cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 467999999999999999999999999999999987542 2334566788888887 79999999999863 4
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
+.+|||||||.||+.-++++......+.+..+..|++.++.||.+||.+.++|||||-.|||++.++.+||+|||++..+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 68999999999999999998776778999999999999999999999999999999999999999999999999999764
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------CCCchHHHHHHHHHHHHhCCC
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------YTRMTRYNYLILVSKKFMEFQ 896 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------~~~sDiwSlGvil~elltg~~ 896 (905)
.. ......+++|||.|||||++.. ..++|+||||++..||--|.+
T Consensus 174 ds---------------------------T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~P 226 (953)
T KOG0587|consen 174 DS---------------------------TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAP 226 (953)
T ss_pred ec---------------------------ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCC
Confidence 31 2234467899999999999984 238999999999999999999
Q ss_pred Cchh
Q 002580 897 PFPI 900 (905)
Q Consensus 897 PF~~ 900 (905)
||..
T Consensus 227 Pl~D 230 (953)
T KOG0587|consen 227 PLCD 230 (953)
T ss_pred CccC
Confidence 9864
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=1.2e-26 Score=246.09 Aligned_cols=178 Identities=25% Similarity=0.294 Sum_probs=150.6
Q ss_pred cCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCHHHH
Q 002580 683 GDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLL 762 (905)
Q Consensus 683 G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~ 762 (905)
|.+|.||+|.+..+++.||+|.+.+.. ....|...+....||||+++++++...+..|++|||++|++|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 889999999999999999999987542 123344455556799999999999999999999999999999999
Q ss_pred HhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccc
Q 002580 763 LDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRH 842 (905)
Q Consensus 763 l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~ 842 (905)
+... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.....
T Consensus 76 l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~---------------- 137 (237)
T cd05576 76 ISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED---------------- 137 (237)
T ss_pred HHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccc----------------
Confidence 8764 3489999999999999999999999999999999999999999999999998744321
Q ss_pred cCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 843 KGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......++..|+|||.+.+ ..++|+||+||++|+|++|..||..
T Consensus 138 --------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 138 --------------SCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred --------------ccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 0112345678999999863 4589999999999999999988753
No 377
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=3e-27 Score=254.92 Aligned_cols=188 Identities=22% Similarity=0.333 Sum_probs=159.8
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC---
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT--- 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~--- 745 (905)
.....+.+.||+|.||.||+|.. +++.||||+++. ...+.+..|.+|++. +.|+||++|+++-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPE------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCH------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence 55678889999999999999998 669999999864 356778889888876 48999999998765444
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeeCCCCCCCEEEcCCCcEEE
Q 002580 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGNGHVSL 815 (905)
Q Consensus 746 -~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~---------gIvHrDLKp~NILl~~~~~vkL 815 (905)
.++||++|.+.|+|.+||+.+ .+++.....|+..+++||+|||.- .|+|||||..|||+.+|++..|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccI 357 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCI 357 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEe
Confidence 789999999999999999875 489999999999999999999973 5999999999999999999999
Q ss_pred EeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---------CCCchHHHHHH
Q 002580 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---------YTRMTRYNYLI 886 (905)
Q Consensus 816 ~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---------~~~sDiwSlGv 886 (905)
+|||+|..+.... +....-..+||.+|||||++.+ ..+.||||+|.
T Consensus 358 aDFGLAl~~~p~~-------------------------~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgL 412 (534)
T KOG3653|consen 358 ADFGLALRLEPGK-------------------------PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGL 412 (534)
T ss_pred eccceeEEecCCC-------------------------CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHH
Confidence 9999997654111 1112234689999999999984 23889999999
Q ss_pred HHHHHHhC
Q 002580 887 LVSKKFME 894 (905)
Q Consensus 887 il~elltg 894 (905)
+|||+++.
T Consensus 413 VLWEi~SR 420 (534)
T KOG3653|consen 413 VLWEIASR 420 (534)
T ss_pred HHHHHHhh
Confidence 99999976
No 378
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.94 E-value=1.4e-26 Score=251.57 Aligned_cols=197 Identities=24% Similarity=0.344 Sum_probs=167.8
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|++.+.||+|++|.||+|.+..+++.|++|.+.... ........+..|+.+++.++|+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 667889999999999999999999999999998653 2233345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
++ ++|.+++.+.. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 80 ~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---- 153 (282)
T cd07829 80 CD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR---- 153 (282)
T ss_pred cC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc----
Confidence 96 59999998753 3589999999999999999999999999999999999999999999999999865431110
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......++..|+|||.+.+ ..++|+|||||++|++++|.+||..
T Consensus 154 -----------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~ 201 (282)
T cd07829 154 -----------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPG 201 (282)
T ss_pred -----------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 1122346788999999863 4589999999999999999999953
No 379
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.6e-27 Score=251.05 Aligned_cols=189 Identities=24% Similarity=0.350 Sum_probs=157.4
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHh--CCCCCcceEEEEEEeCC---
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT--- 745 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~--- 745 (905)
..+..+.+.||+|.||.||+|.+ -|+.||||++... +...+.+|.+|++. |+|+||+.|++.-..+.
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr------dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR------DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred hheeEEEEEecCccccceeeccc--cCCceEEEEeccc------chhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 45678899999999999999999 6789999998743 33456778888766 59999999998755332
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeeCCCCCCCEEEcCCCcEEEE
Q 002580 746 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLT 816 (905)
Q Consensus 746 -~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~--------gIvHrDLKp~NILl~~~~~vkL~ 816 (905)
.+|||++|.+.|+|++||.++ .++.....+++..++.||.|||-. .|.|||||..|||+..+|.+.|+
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 589999999999999999884 389999999999999999999963 49999999999999999999999
Q ss_pred eccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---------CCCCchHHHHHHH
Q 002580 817 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---------AYTRMTRYNYLIL 887 (905)
Q Consensus 817 DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---------~~~~sDiwSlGvi 887 (905)
|+|+|-........+ ....+..+||..|||||++. .+..+||||||++
T Consensus 359 DLGLAv~h~~~t~~i-----------------------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLV 415 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTI-----------------------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLV 415 (513)
T ss_pred eceeeEEecccCCcc-----------------------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHH
Confidence 999997655332211 11234568999999999997 2568999999999
Q ss_pred HHHHHh
Q 002580 888 VSKKFM 893 (905)
Q Consensus 888 l~ellt 893 (905)
+||+.-
T Consensus 416 lWEiar 421 (513)
T KOG2052|consen 416 LWEIAR 421 (513)
T ss_pred HHHHHH
Confidence 999974
No 380
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.9e-27 Score=258.42 Aligned_cols=207 Identities=20% Similarity=0.242 Sum_probs=178.0
Q ss_pred ccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC
Q 002580 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 744 (905)
Q Consensus 665 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 744 (905)
..+++...+.....+||-|.||.||.+.++.-.-.||||.++.. .-.++.|+.|..+|+.++|||+|+++++|...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 34456666777888999999999999999988889999998754 34678999999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+|||+|||..|+|.+||.......++.-..+.++.||..|+.||..+++|||||-..|+|+..+..+|++|||++++.
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM 415 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM 415 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence 99999999999999999999877777888888999999999999999999999999999999999999999999999876
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH-hCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF-MEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell-tg~~PF~~ 900 (905)
..+... .....--...|.|||.+.. +-++|+|+|||+|||+. +|-.||+.
T Consensus 416 tgDTYT--------------------------AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG 469 (1157)
T KOG4278|consen 416 TGDTYT--------------------------AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG 469 (1157)
T ss_pred cCCcee--------------------------cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC
Confidence 533211 0111112357999999985 34999999999999998 68899975
Q ss_pred h
Q 002580 901 L 901 (905)
Q Consensus 901 ~ 901 (905)
+
T Consensus 470 i 470 (1157)
T KOG4278|consen 470 I 470 (1157)
T ss_pred c
Confidence 4
No 381
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.94 E-value=2e-27 Score=268.43 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=177.5
Q ss_pred ccccccCCCeeecccccccCceEEEEEEEcCCC---eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Q 002580 665 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 741 (905)
Q Consensus 665 ~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~---~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 741 (905)
-..+++.....+.++||.|.||.||.+..+..+ ..||||.++.. ........|+.|..||-+++||||++|.++.
T Consensus 622 FakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G--ytekqrrdFL~EAsIMGQFdHPNIIrLEGVV 699 (996)
T KOG0196|consen 622 FAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG--YTEKQRRDFLSEASIMGQFDHPNIIRLEGVV 699 (996)
T ss_pred hhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC--ccHHHHhhhhhhhhhcccCCCCcEEEEEEEE
Confidence 344577788899999999999999999987665 46999999865 3556678899999999999999999999999
Q ss_pred EeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 742 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 742 ~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
.....++||+|||++|+|..+|+.+.. .|+..+...|++.|+.|++||-++|+|||||...|||++.+-.+|++|||++
T Consensus 700 Tks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 700 TKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred ecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccce
Confidence 999999999999999999999988754 4999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccC--Ccccccccccc---CCCCchHHHHHHHHHHHH-hCC
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG--TEEYIAPVSDF---AYTRMTRYNYLILVSKKF-MEF 895 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--T~~Y~APE~l~---~~~~sDiwSlGvil~ell-tg~ 895 (905)
+.+..++... .++.-| ...|-|||.+. .+.+||+||||++|||.+ +|.
T Consensus 779 Rvledd~~~~--------------------------ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGE 832 (996)
T KOG0196|consen 779 RVLEDDPEAA--------------------------YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 832 (996)
T ss_pred eecccCCCcc--------------------------ccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCC
Confidence 8876443211 011112 25899999998 366999999999999988 898
Q ss_pred CCch
Q 002580 896 QPFP 899 (905)
Q Consensus 896 ~PF~ 899 (905)
.||=
T Consensus 833 RPYW 836 (996)
T KOG0196|consen 833 RPYW 836 (996)
T ss_pred Cccc
Confidence 8874
No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=2.5e-26 Score=246.81 Aligned_cols=199 Identities=26% Similarity=0.391 Sum_probs=164.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
+|.+.+.||+|+||.||++.+..++..+++|+++..... .......+..|+.+++.++||||+++++++.+....|+|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 588999999999999999999888777777776643221 222344567789999999999999999999998999999
Q ss_pred EeccCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 751 TDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
|||+++++|..++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 999999999988864 22346899999999999999999999999999999999999974 679999999986543111
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
.......|++.|+|||.+.+ ..++|+||||+++|+|++|..||.
T Consensus 160 ---------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~ 206 (260)
T cd08222 160 ---------------------------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206 (260)
T ss_pred ---------------------------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 11223457889999999863 448999999999999999999985
No 383
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.6e-27 Score=260.85 Aligned_cols=191 Identities=26% Similarity=0.350 Sum_probs=162.6
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEE
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 748 (905)
..+.|.+...+|.|+|+.|-.|.+..+++.+++|++.+.. .....|+.++... +||||+++++.+.++.+.|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceee
Confidence 3678999999999999999999999999999999998652 2234466665554 8999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEE-cCCCcEEEEeccCccccCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL-QGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl-~~~~~vkL~DFG~s~~~~~~ 827 (905)
+|||++.|+.|.+.+...+. +. ..+..|+.+|+.++.|||++|+|||||||+|||+ ++.|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred eeehhccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 99999999988887766432 33 7788899999999999999999999999999999 68999999999999764311
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
...-|-|..|.|||++.. +.++|+||||++||+|++|+.||.-
T Consensus 470 ------------------------------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~ 515 (612)
T KOG0603|consen 470 ------------------------------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAA 515 (612)
T ss_pred ------------------------------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCcccc
Confidence 123367889999999983 4599999999999999999999964
No 384
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.94 E-value=1.8e-26 Score=297.64 Aligned_cols=374 Identities=14% Similarity=0.148 Sum_probs=250.6
Q ss_pred CcccccccchHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHH
Q 002580 181 GGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETL 260 (905)
Q Consensus 181 ~~~~~~l~~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l 260 (905)
+..++.+.++++.++.+++.++++++++|. +|+|+++|++|++++||+.+|++|+++..+.++++.......+...+
T Consensus 272 r~~~~~l~~~e~r~~~l~e~~~~~i~~~d~---dG~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~d~~~~~~~~~~~~ 348 (1092)
T PRK09776 272 RAERKHISESETRFRNAMEYSAIGMALVGT---EGQWLQVNKALCQFLGYSQEELRGLTFQQLTWPEDLNKDLQQVEKLL 348 (1092)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCHHHHccCCceeccCcchhHhHHHHHHHHH
Confidence 445566788888999999999999999999 99999999999999999999999999887777776655555555554
Q ss_pred HcC-CcEEEEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChhHHHHHHHHHHHHHH
Q 002580 261 QNG-QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMAT 339 (905)
Q Consensus 261 ~~g-~~~~~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~~l~~~~~~~~~~~~ 339 (905)
..+ ..+..+.+..++||+.+|+..+..|+++.+|.+.+++++.+|||++|++|++++...+.
T Consensus 349 ~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~g~~~~~i~~~~DITerk~~e~~l~~~~~~----------------- 411 (1092)
T PRK09776 349 SGEINSYSMEKRYYRRDGEVVWALLAVSLVRDTDGTPLYFIAQIEDINELKRTEQVNERLMER----------------- 411 (1092)
T ss_pred cCCccceeeeeEEEcCCCCEEEEEEEEEEEECCCCCEeeehhhHHhhHHHHHHHHHHHHHHHH-----------------
Confidence 443 34678888999999999999999999999999999999999999999999887642111
Q ss_pred HHHHHHHHHccCCCCccc-cCCCCcccccCCCchhhhhhccccCccCC---------CCCCCcCCCCCCC--cccccccc
Q 002580 340 SSVTELVQAMKKPRSLSE-STNRPPIIRKSEGGVEEERAGALGRRKSE---------NVPPPRRNSYGGG--CRTSMQRI 407 (905)
Q Consensus 340 ~~~~~l~~al~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~~~~--~~~~~~~i 407 (905)
...+.++........+ ......++. ...+..|....+ .+.+..+...... ........
T Consensus 412 --~~~~~~~~~~~i~~~d~~~~~~~~n~--------~~~~l~G~~~~~~~~~~~~~~~~~p~d~~~~~~~~~~~~~~~~~ 481 (1092)
T PRK09776 412 --ITLANEAGGIGIWEWDLKPNIISWDK--------RMFELYEIPPHIKPTWQVWYACLHPEDRQRVEKEIRDALQGRSP 481 (1092)
T ss_pred --HHHHHHhcCceEEEEecCCCeEeeCH--------HHHHHhCCCcccCCCHHHHHHhcCHhHHHHHHHHHHHHHhcCCC
Confidence 1112222222211111 111111111 111122221111 0111111000000 00000000
Q ss_pred ccccccccccCCccccccccccccCCCCCCCccccchhccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHHHHHhhcc
Q 002580 408 SEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIEK 486 (905)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~e~k~~e~~~~~~-~~l~~i~e~~~~ 486 (905)
........++.| ..|....... +....+.........+|||++|+.+++++++ .+++.+++++++
T Consensus 482 ~~~e~r~~~~dG-~~w~~~~~~~-------------~~d~~G~~~~~ig~~~DITerk~~e~~L~~~~~~l~~~l~~~~~ 547 (1092)
T PRK09776 482 FKLEFRIVVKDG-VRHIRALANR-------------VLNKDGEVERLLGINMDMTEVRQLNEALFQEKERLHITLDSIGE 547 (1092)
T ss_pred eeEEEEEEcCCc-eEEEEEeeEE-------------EECCCCCEEEEEeeeeehhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 111122223334 3333222211 1122233333444568999999988888766 678999999999
Q ss_pred cEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCC--CCHHHHHHHHHHHHcCCc--EEEEEEEEecCCcE
Q 002580 487 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPE--TDPATVRKIRAAIDNQTD--VTVQLINYTKSGKK 562 (905)
Q Consensus 487 ~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~--~~~~~~~~~~~~l~~g~~--~~~e~~~~~kdG~~ 562 (905)
+|+++|. +|+|+++|+++++++||+.+|++|++...+.+.. ........+......+.. +..+....++||..
T Consensus 548 ~i~~~D~---~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 624 (1092)
T PRK09776 548 AVVCTDM---AMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGS 624 (1092)
T ss_pred EEEEECC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcE
Confidence 9999999 5569999999999999999999999966554322 222222334444444444 55677788999999
Q ss_pred EEEEEEEeeeecCCCCEEEEEEEeecCcccccccccCCc
Q 002580 563 FWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIP 601 (905)
Q Consensus 563 ~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~~~ 601 (905)
+|+..+..|++|.+|++.+++++++|||++|+.++++..
T Consensus 625 ~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~L~~ 663 (1092)
T PRK09776 625 YDVHYSITPLSTLDGENIGSVLVIQDVTESRKMLRQLSY 663 (1092)
T ss_pred EEEEEEeeeeecCCCCEEEEEEEEEecchHHHHHHHHHh
Confidence 999999999999999999999999999999997665543
No 385
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.94 E-value=3.3e-26 Score=252.01 Aligned_cols=204 Identities=19% Similarity=0.253 Sum_probs=169.4
Q ss_pred cCCCeeecccccccCceEEEEEEEcCC----CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
......+.+.||.|.||.||+|....- .--||||..+... +.+..+.|..|..+|+.++||||++++|+|.+ .
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~ 463 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-Q 463 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-c
Confidence 333445667899999999999986332 3358889877643 45568899999999999999999999999975 5
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
..|||||+++-|.|..|++.+. ..++......++.||+.||.|||+..+|||||-..|||+.+...+||+|||+++.+.
T Consensus 464 P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 464 PMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred ceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 7999999999999999998764 568999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---CCCCchHHHHHHHHHHHH-hCCCCchhh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---AYTRMTRYNYLILVSKKF-MEFQPFPIL 901 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---~~~~sDiwSlGvil~ell-tg~~PF~~~ 901 (905)
...-.. .+...-...|||||.+. .++++|+|=|||+|||++ .|..||.+.
T Consensus 543 d~~yYk--------------------------aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv 596 (974)
T KOG4257|consen 543 DDAYYK--------------------------ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV 596 (974)
T ss_pred ccchhh--------------------------ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc
Confidence 332211 01112345799999998 367999999999999998 799999876
Q ss_pred hc
Q 002580 902 CR 903 (905)
Q Consensus 902 ~r 903 (905)
..
T Consensus 597 kN 598 (974)
T KOG4257|consen 597 KN 598 (974)
T ss_pred cc
Confidence 53
No 386
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=5.4e-27 Score=230.76 Aligned_cols=192 Identities=21% Similarity=0.319 Sum_probs=164.1
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeC--Ce
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTK--TH 746 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~--~~ 746 (905)
+.++|++.+++|+|.++.||.|.+..+++.++||++++- ..+.+.+|+.||..|. ||||++++++..+. ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 357899999999999999999999999999999998753 4577899999999995 99999999998765 46
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-CcEEEEeccCccccC
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 825 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-~~vkL~DFG~s~~~~ 825 (905)
..+|+||+.+.+...+... ++...++.++.+++.||.|||++||+|||+||.|++|+.. -.++|+|+|+|.+..
T Consensus 110 paLiFE~v~n~Dfk~ly~t-----l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH 184 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT-----LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH 184 (338)
T ss_pred chhHhhhhccccHHHHhhh-----hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence 7899999988887766543 8888999999999999999999999999999999999864 579999999996643
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHHHhCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~elltg~~PF~~ 900 (905)
... .-+-.+.+..|--||.+..+ ..-|+|||||+|..|++.+-||=.
T Consensus 185 p~~----------------------------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFh 235 (338)
T KOG0668|consen 185 PGK----------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235 (338)
T ss_pred CCc----------------------------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccC
Confidence 221 12234677889999999843 478999999999999999999843
No 387
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.4e-28 Score=242.87 Aligned_cols=198 Identities=23% Similarity=0.325 Sum_probs=164.7
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC-----eE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-----HV 747 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-----~~ 747 (905)
+.+.-+.||-|+||.||.+.+..+|+.||+|.+..- ..+-...+++.+|+++|..++|.|++..++..+... .+
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv-fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV-FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchH-HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 344557899999999999999999999999988653 344456678899999999999999999988876443 46
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCC
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 827 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~ 827 (905)
|+++|+| ..+|..++-.. ..++.+.+..+++||++||+|||+.+|.||||||.|+|++++..+||||||+++....+
T Consensus 133 YV~TELm-QSDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 133 YVLTELM-QSDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHHH-HhhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 8889998 56888877553 45888999999999999999999999999999999999999999999999999764422
Q ss_pred CCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 828 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. ...+..+-|..|.|||++.| +.+.||||.||++.||+-.+..|..
T Consensus 210 ~~--------------------------~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 210 DR--------------------------LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred hh--------------------------hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 21 12233466889999999995 4589999999999999988888753
No 388
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=6.9e-28 Score=240.01 Aligned_cols=205 Identities=20% Similarity=0.258 Sum_probs=167.4
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEe-----
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----- 743 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----- 743 (905)
...+.|.-...||+|.||.||+|+...+|+.||+|.+--.. ..........+|+++|..++|+|++.++..|..
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmen-eKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~ 92 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKATPT 92 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhc-cccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCc
Confidence 34567888899999999999999999999999988653210 112233556789999999999999998877642
Q ss_pred ---CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 744 ---KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 744 ---~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
...+|+||.+|+ .+|.-++... ...++...+.+++.+++.||.|+|++.|+|||+||+|+||+.+|.+||+|||+
T Consensus 93 ~r~r~t~ylVf~~ce-hDLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 93 NRDRATFYLVFDFCE-HDLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ccccceeeeeHHHhh-hhHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 345999999994 6888888653 45699999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCC
Q 002580 821 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQ 896 (905)
Q Consensus 821 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~ 896 (905)
++....+..... ..-+..+-|.+|.+||.+.| .++.|+|+.||+|.+|.++.+
T Consensus 171 ar~fs~~~n~~k-----------------------prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrsp 227 (376)
T KOG0669|consen 171 ARAFSTSKNVVK-----------------------PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSP 227 (376)
T ss_pred ccceecccccCC-----------------------CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCc
Confidence 977653333211 11234567999999999996 358999999999999999998
Q ss_pred Cch
Q 002580 897 PFP 899 (905)
Q Consensus 897 PF~ 899 (905)
-|.
T Consensus 228 imq 230 (376)
T KOG0669|consen 228 IMQ 230 (376)
T ss_pred ccc
Confidence 774
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=2.3e-26 Score=256.30 Aligned_cols=205 Identities=20% Similarity=0.248 Sum_probs=171.0
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCC---CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 745 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t---~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 745 (905)
|..++..+.+.||+|.||.|+.+.+... -..||||.+....... ....|.+|+.+|.+|+|+|+++||++..+ .
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-q 183 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-Q 183 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-c
Confidence 3345677888999999999999988543 2468999998764432 67889999999999999999999999887 7
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccC
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~ 825 (905)
.+.||||+++.|+|.+.|.+.....|.-.....++.||+.||.||.++++|||||-..|+|+-..-.+||+|||+.+.++
T Consensus 184 p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccC
Confidence 88999999999999999988666778888999999999999999999999999999999999988899999999998776
Q ss_pred CCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH-hCCCCchh
Q 002580 826 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF-MEFQPFPI 900 (905)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell-tg~~PF~~ 900 (905)
.....+ .|... .--...|+|||.+.. +.++|+|+|||+||||| +|..||..
T Consensus 264 ~ned~Y------------------vm~p~------rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G 318 (1039)
T KOG0199|consen 264 ENEDMY------------------VMAPQ------RKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVG 318 (1039)
T ss_pred CCCcce------------------EecCC------CcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCC
Confidence 443321 11111 112357999999983 56999999999999999 56888854
No 390
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=1e-26 Score=251.71 Aligned_cols=201 Identities=22% Similarity=0.260 Sum_probs=170.7
Q ss_pred cCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC------CCcceEEEEEEe
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH------PFVPALYASFQT 743 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h------~nIv~l~~~~~~ 743 (905)
-.++|.+....|+|-|++|..|.+..-|..||||+|..+. .....-+.|++||++|+. -|++.|+..|..
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE----~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE----VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch----HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 3578999999999999999999999999999999998653 233455689999999952 389999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-CcEEEEeccCc
Q 002580 744 KTHVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLS 821 (905)
Q Consensus 744 ~~~~~lV~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-~~vkL~DFG~s 821 (905)
.+++|||+|-+ ..+|.++|+.-+ +-.+....+..++.|++.||..|-..||+|.||||+|||++.. ..+||||||.|
T Consensus 506 knHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA 584 (752)
T KOG0670|consen 506 KNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSA 584 (752)
T ss_pred cceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccc
Confidence 99999999998 789999998643 3468889999999999999999999999999999999999864 57899999998
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
...+.. ..+.+.-+..|.|||++.| ....|+||.||+||||+||+..|
T Consensus 585 ~~~~en-----------------------------eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlF 635 (752)
T KOG0670|consen 585 SFASEN-----------------------------EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILF 635 (752)
T ss_pred cccccc-----------------------------cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceec
Confidence 664411 1234456678999999996 45899999999999999999999
Q ss_pred hhhhcc
Q 002580 899 PILCRK 904 (905)
Q Consensus 899 ~~~~r~ 904 (905)
+..+.|
T Consensus 636 pG~TNN 641 (752)
T KOG0670|consen 636 PGRTNN 641 (752)
T ss_pred CCCCcH
Confidence 876543
No 391
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=1.8e-25 Score=264.56 Aligned_cols=199 Identities=17% Similarity=0.183 Sum_probs=143.6
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCC----CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEE---
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGS----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS--- 740 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t----~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~--- 740 (905)
.+..++|.+.+.||+|+||.||+|.+..+ +..||+|.+.... ..+....+ .+....+.++..++..
T Consensus 128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~-----~~e~~~~e--~l~~~~~~~~~~~~~~~~~ 200 (566)
T PLN03225 128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG-----AVEIWMNE--RVRRACPNSCADFVYGFLE 200 (566)
T ss_pred CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc-----hhHHHHHH--HHHhhchhhHHHHHHhhhc
Confidence 34678999999999999999999999888 8999999876431 11111111 1122222222222211
Q ss_pred ---EEeCCeEEEEEeccCCCCHHHHHhhCCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeeCC
Q 002580 741 ---FQTKTHVCLITDYCPGGELFLLLDRQPTK------------------VLKEDAVRFYAAEVVVALEYLHCQGIIYRD 799 (905)
Q Consensus 741 ---~~~~~~~~lV~E~~~gg~L~~~l~~~~~~------------------~l~~~~~~~i~~qil~gL~~LH~~gIvHrD 799 (905)
.......++||||+.+++|.+++...... ......+..++.||+.||.|||++||+|||
T Consensus 201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD 280 (566)
T PLN03225 201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD 280 (566)
T ss_pred ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence 23556899999999999999998753210 112344667999999999999999999999
Q ss_pred CCCCCEEEcC-CCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---
Q 002580 800 LKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--- 875 (905)
Q Consensus 800 LKp~NILl~~-~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--- 875 (905)
|||+|||++. ++.+||+|||+|+....... .....+++|+.|+|||.+..
T Consensus 281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~--------------------------~~~~~~~~t~~Y~APE~~~~~~~ 334 (566)
T PLN03225 281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGIN--------------------------YIPKEFLLDPRYAAPEQYIMSTQ 334 (566)
T ss_pred CCHHHEEEeCCCCcEEEEeCCCccccccccc--------------------------cCCcccccCCCccChHHhhccCC
Confidence 9999999985 57999999999965431111 11235678999999997642
Q ss_pred ----------------------CCCchHHHHHHHHHHHHhCCCCch
Q 002580 876 ----------------------YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 876 ----------------------~~~sDiwSlGvil~elltg~~PF~ 899 (905)
..++|+|||||+||+|+++..|+.
T Consensus 335 ~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~ 380 (566)
T PLN03225 335 TPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD 380 (566)
T ss_pred CCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc
Confidence 124599999999999999887764
No 392
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=3.1e-25 Score=239.68 Aligned_cols=141 Identities=29% Similarity=0.442 Sum_probs=125.2
Q ss_pred cCccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-----C---CCc
Q 002580 663 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----H---PFV 734 (905)
Q Consensus 663 ~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-----h---~nI 734 (905)
+.-|+.|+.++|.+.++||.|-|++||+|.+..+.+.||+|+.+.. ....+....||.+|++++ | .+|
T Consensus 69 V~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 69 VRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred eeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 3457788889999999999999999999999999999999998753 345567788999999883 3 369
Q ss_pred ceEEEEEEe----CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeeCCCCCCCEEEc
Q 002580 735 PALYASFQT----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQ 808 (905)
Q Consensus 735 v~l~~~~~~----~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~-gIvHrDLKp~NILl~ 808 (905)
|+|++.|.. +.++|||+|++ |.+|..++.....+.++...+..|++||+.||.|||.. ||||-||||+|||+.
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999999974 45899999999 89999999988888899999999999999999999986 999999999999995
No 393
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.93 E-value=2.1e-25 Score=258.98 Aligned_cols=360 Identities=13% Similarity=0.047 Sum_probs=229.5
Q ss_pred HHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCC-cEEEEEEEEccC
Q 002580 198 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKKD 276 (905)
Q Consensus 198 le~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~kd 276 (905)
+++++|+++++|. +|+|++||++++.++||+.+|++|+++..+.+++........+...+..+. .+..++....++
T Consensus 2 ~~~~~d~~~~~d~---~g~i~~~n~~~~~~~g~~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 78 (442)
T TIGR02040 2 LATAADVTLLLDA---EGVVREVAANPHHPSFEQLSEWEGRRWEEIVTAESVEKFELRLSEALRTGRGAVRVELNHIDPS 78 (442)
T ss_pred CcccCcEEEEECC---CCcEEEEEECCCcccccccccCCCCcHhHhhCcchHHHHHHHHHHHhccCCCcceEeeccCCCC
Confidence 5778999999999 999999999999999999999999999877777665555566666666654 455565555667
Q ss_pred CCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHccCCCCcc
Q 002580 277 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLS 356 (905)
Q Consensus 277 G~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~al~~~~~~~ 356 (905)
|..+|+.++..++.+ +. +++++.+|||++++.+.++......+.. +...-.........+++...++..+.
T Consensus 79 g~~~~~~~~~~~~~~--~~--~~~~i~rDi~~~~~~~~~l~~~~~~~e~-----~~~~l~~~e~r~~~l~e~~~~~i~~~ 149 (442)
T TIGR02040 79 SFELPMRFILVRLGA--DR--GVLALGRDLRAVAELQQQLVAAQQAMER-----DYWTLREMETRYRVVLEVSSDAVLLV 149 (442)
T ss_pred CCccCeEEEEEEeCC--CC--eEEEEecccHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhCCceEEEE
Confidence 777777777666644 22 5788999999988876654221111100 00001111223444555566655554
Q ss_pred c--cCCCCcccccCCCchhhhhhccccCccCCCCCCCcCCCCCCC---ccccccccccccccccccCCcccccccccccc
Q 002580 357 E--STNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG---CRTSMQRISEVPEKKKQKSGRRSFMGLIGRKS 431 (905)
Q Consensus 357 ~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 431 (905)
. .+....++.......||...+++|+...+.+++......... ...... ..... ......+..... ..+.
T Consensus 150 d~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~-~~~~~~~~~~~~--~~~~- 224 (442)
T TIGR02040 150 DMSTGRIVEANSAAAALLGGVGQSLVGRAFPQEFEGRRREELMLTLRNVRATGS-AAPVR-ILLRRSQKRLLV--VVSV- 224 (442)
T ss_pred ECCCCEEEEEcHHHHHHhCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCC-CcceE-EEEcCCCeEEEE--EEEE-
Confidence 4 344566677777778889999999988887765433210000 000000 00000 001111111100 0000
Q ss_pred CCCCCCCccccchhccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHc
Q 002580 432 QSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELT 511 (905)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~e~k~~e~~~~~~~~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~ 511 (905)
....+.. .......||++++..+++++ .+|+.++++++++|+++|. +|+|++||++|++++
T Consensus 225 -------------~~~~~~~-~~l~~~~dit~~~~~e~~~~--~~~~~l~e~~~d~I~v~D~---~G~I~~~N~a~~~l~ 285 (442)
T TIGR02040 225 -------------FRQDGES-LFLCQLSPAGATQPVGDELS--ENLARLYHEAPDAIVFSDA---DGTIRGANEAFLELT 285 (442)
T ss_pred -------------EEeCCce-EEEEEEcccchhhhhhHHHH--HHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHh
Confidence 0000000 00112467788876665443 2589999999999999999 556999999999999
Q ss_pred CCC-hhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCc
Q 002580 512 EYS-REEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 590 (905)
Q Consensus 512 Gys-~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DIT 590 (905)
||+ .++++|++...+.++.... ....+......|.....+..+.++||+.+|+.+++.|+.+.++ ..++++++|||
T Consensus 286 G~~~~~~l~G~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDIT 362 (442)
T TIGR02040 286 DSSSLEAVRGRTLDRWLGRGGVD-LRVLLSNVRRTGQVRLYATTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDIS 362 (442)
T ss_pred CCCChHHHcCCCHHHHhCCCccc-HHHHHHHHhhcCceEEEEEEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecch
Confidence 997 5789999976555433221 1222333334555556777888999999999999999987544 46889999999
Q ss_pred cccccc
Q 002580 591 EHLEPL 596 (905)
Q Consensus 591 erk~~e 596 (905)
+||+++
T Consensus 363 eR~~~~ 368 (442)
T TIGR02040 363 RRLTMR 368 (442)
T ss_pred hhccCC
Confidence 999964
No 394
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.4e-26 Score=229.66 Aligned_cols=193 Identities=22% Similarity=0.277 Sum_probs=159.3
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEE-EEEeCCeEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA-SFQTKTHVC 748 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~-~~~~~~~~~ 748 (905)
.+.|.+.+.||+|.||.+.+|.++.++..+++|.+++.. .....|.+|...--.| .|.||+.-|+ .|+..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~----tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ----TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch----hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 467999999999999999999999999999999988653 3456677787654445 5889998776 477888999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEc--CCCcEEEEeccCccccCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~--~~~~vkL~DFG~s~~~~~ 826 (905)
+++||++-|+|.+-+.. ..+-+.....++.|+++||.|||++++||||||.+||||- +...+||||||.++..+.
T Consensus 99 F~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred EeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 99999999999877654 3488889999999999999999999999999999999994 234899999999876441
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc--------CCCCchHHHHHHHHHHHHhCCCCc
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--------AYTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--------~~~~sDiwSlGvil~elltg~~PF 898 (905)
.- .-.-.+..|.+||.+. ..+.+|+|.||+++|..+||.+||
T Consensus 176 tV------------------------------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PW 225 (378)
T KOG1345|consen 176 TV------------------------------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPW 225 (378)
T ss_pred ee------------------------------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcc
Confidence 11 0112456799998876 356899999999999999999999
Q ss_pred hh
Q 002580 899 PI 900 (905)
Q Consensus 899 ~~ 900 (905)
..
T Consensus 226 Qk 227 (378)
T KOG1345|consen 226 QK 227 (378)
T ss_pred hh
Confidence 74
No 395
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=3.5e-24 Score=223.85 Aligned_cols=198 Identities=33% Similarity=0.502 Sum_probs=169.0
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
|.+.+.||.|++|.||++.+..++..+++|.+...... .....+.+|++.+..++|+|++++++++......++++|+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 56778999999999999999888999999998865322 2567888999999999999999999999998999999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCC
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLP 833 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~ 833 (905)
+++++|.+++...... +++..+..++.+++.+|.+||+++++|+||+|.||+++.++.++|+|||++.......
T Consensus 79 ~~~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~----- 152 (225)
T smart00221 79 CEGGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDL----- 152 (225)
T ss_pred cCCCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----
Confidence 9999999999864321 7889999999999999999999999999999999999999999999999986543111
Q ss_pred cchhhhccccCCCCcccccccccccccccCCccccccccc-c---CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 834 TTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSD-F---AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l-~---~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
........++..|++||.+ . ...++|+|+||+++|+|++|+.||..
T Consensus 153 ---------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 ---------------------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ---------------------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0012345678899999998 3 23489999999999999999999965
No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.92 E-value=2.2e-24 Score=249.11 Aligned_cols=206 Identities=17% Similarity=0.175 Sum_probs=151.8
Q ss_pred cccCCCeeecccccccCceEEEEEEEc----------------CCCeEEEEEEeecccccCHH-----------HHHHHH
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELC----------------GSGQYFAMKAMDKGVMLNRN-----------KVHRAC 720 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~----------------~t~~~vavK~~~~~~~~~~~-----------~~~~~~ 720 (905)
.+..++|.+.++||+|+||.||++... ..++.||||.+......... ..+...
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhH
Confidence 466889999999999999999999752 23567999998643111000 112234
Q ss_pred HHHHHHHhCCCCCc-----ceEEEEEEe--------CCeEEEEEeccCCCCHHHHHhhCC--------------------
Q 002580 721 AEREILDMLDHPFV-----PALYASFQT--------KTHVCLITDYCPGGELFLLLDRQP-------------------- 767 (905)
Q Consensus 721 ~E~~il~~l~h~nI-----v~l~~~~~~--------~~~~~lV~E~~~gg~L~~~l~~~~-------------------- 767 (905)
.|+..+.+++|.++ ++++++|.. .+..++||||+++++|.+++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 56667777766544 566666642 356899999999999999986421
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCC
Q 002580 768 --TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQ 845 (905)
Q Consensus 768 --~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~ 845 (905)
...+++..+..++.|++.+|.|||+++|+||||||+|||++.++.+||+|||++........
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---------------- 364 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---------------- 364 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----------------
Confidence 11235667888999999999999999999999999999999999999999999854321100
Q ss_pred CCcccccccccccccccCCccccccccccCC-------------------------CCchHHHHHHHHHHHHhCCC-Cch
Q 002580 846 QNPVFMAEPMRASNSFVGTEEYIAPVSDFAY-------------------------TRMTRYNYLILVSKKFMEFQ-PFP 899 (905)
Q Consensus 846 ~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~-------------------------~~sDiwSlGvil~elltg~~-PF~ 899 (905)
.......+|+.|+|||.+... .+.|+||+||++|+|++|.. ||.
T Consensus 365 ----------~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~ 434 (507)
T PLN03224 365 ----------FNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA 434 (507)
T ss_pred ----------cCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence 001122458899999987521 14699999999999999986 775
No 397
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.92 E-value=1.2e-24 Score=276.99 Aligned_cols=183 Identities=19% Similarity=0.309 Sum_probs=154.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.|.....||+|+||.||+|.+..++..||+|.+..... ....|++++++++||||++++++|.+.+..|+|||
T Consensus 691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E 763 (968)
T PLN00113 691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-------IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE 763 (968)
T ss_pred hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-------ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence 45667789999999999999988999999998864321 11245788999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH---CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 829 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH---~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~ 829 (905)
|+++++|.+++.. +++..+..|+.||+.||.||| +.+|+||||||+||+++.++..++. ||......
T Consensus 764 y~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~---- 833 (968)
T PLN00113 764 YIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC---- 833 (968)
T ss_pred CCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc----
Confidence 9999999999953 788999999999999999999 6699999999999999998888775 66542211
Q ss_pred CCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 830 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 830 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
......+|+.|+|||++.+ ..++|||||||++|||++|+.||.
T Consensus 834 ---------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~ 879 (968)
T PLN00113 834 ---------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPAD 879 (968)
T ss_pred ---------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCC
Confidence 0112367899999999874 459999999999999999999985
No 398
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-25 Score=231.13 Aligned_cols=195 Identities=21% Similarity=0.336 Sum_probs=168.3
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeC------
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 744 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 744 (905)
..+|.-++.+|.|.. .|..+.+.-+++.+|+|.+... ..+.....+..+|..++..++|+||++++.+|.-.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 457888999999999 8888999889999999988766 44455567788999999999999999999999744
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+|+|||+| ..+|...+.. .+....+..|+.|+++|++|||+.||+||||||+||++..++.+||+|||++...
T Consensus 94 ~e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 94 QEVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HhHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc
Confidence 3589999999 6789888863 2788999999999999999999999999999999999999999999999999543
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.. .-..+.++.|..|.|||++.+ ....||||+||++.||++|+..|+.
T Consensus 169 ~~----------------------------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 169 DT----------------------------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred Cc----------------------------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 21 113456789999999999985 3489999999999999999999873
No 399
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.91 E-value=4.8e-25 Score=251.98 Aligned_cols=195 Identities=22% Similarity=0.258 Sum_probs=158.6
Q ss_pred eeecccccccCceE-EEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCeEEEEE
Q 002580 674 FRPIKPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 674 y~i~~~Lg~G~~g~-V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
|...+.+|.|+.|+ ||+|.. .|+.||||.+-.. ......+|+..|+.- .||||+++|+.-.+....||..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIal 582 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIAL 582 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEe
Confidence 44556788998865 689988 7889999987543 446778999999988 6999999999989999999999
Q ss_pred eccCCCCHHHHHhhCC-C-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC---C--CcEEEEeccCcccc
Q 002580 752 DYCPGGELFLLLDRQP-T-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---N--GHVSLTDFDLSCLT 824 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~-~-~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~---~--~~vkL~DFG~s~~~ 824 (905)
|+| ..+|.+++.... . ........+.++.|++.||++||+.+||||||||.||||+. + ..++|+|||+|+..
T Consensus 583 ELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 583 ELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 999 689999998731 1 11111345678899999999999999999999999999975 3 37899999999987
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhC-CCCchh
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFME-FQPFPI 900 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg-~~PF~~ 900 (905)
...... .....+..||-+|+|||++.. ..+.|||||||++|+.++| .+||..
T Consensus 662 ~~~~sS------------------------~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 662 AGGKSS------------------------FSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred CCCcch------------------------hhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc
Confidence 644332 223456789999999999994 4588999999999999988 999975
Q ss_pred h
Q 002580 901 L 901 (905)
Q Consensus 901 ~ 901 (905)
.
T Consensus 718 ~ 718 (903)
T KOG1027|consen 718 S 718 (903)
T ss_pred h
Confidence 4
No 400
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=1.3e-24 Score=232.67 Aligned_cols=221 Identities=21% Similarity=0.257 Sum_probs=170.0
Q ss_pred cCCCeeecccccccCceEEEEEEEcC---CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 002580 670 NLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (905)
Q Consensus 670 ~~~~y~i~~~Lg~G~~g~V~~~~~~~---t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 745 (905)
..+.|.++.+||.|.|++||++.+.. ..+.||+|.+... ....++..|+++|..+ .+.||+++.+++..++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t-----s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT-----SSPSRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc-----cCchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 35679999999999999999999887 7889999988654 2446789999999998 6999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-CCcEEEEeccCcccc
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLT 824 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-~~~vkL~DFG~s~~~ 824 (905)
.+++||||++.....+++.. ++...+..+++.++.||.++|.+|||||||||+|+|.+. .+.-.|+|||++...
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~ 183 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRY 183 (418)
T ss_pred eeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHH
Confidence 99999999999998888765 778899999999999999999999999999999999975 567899999999721
Q ss_pred CCCC------C----CCCC-cch-hhhccccCCCCcccccc-----cccccccccCCccccccccccC----CCCchHHH
Q 002580 825 SCKP------Q----LLLP-TTN-EKKRRHKGQQNPVFMAE-----PMRASNSFVGTEEYIAPVSDFA----YTRMTRYN 883 (905)
Q Consensus 825 ~~~~------~----~~~~-~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwS 883 (905)
.... . ...+ ... ....+..+...|.-... .-.......||++|.|||++.. ++++|+||
T Consensus 184 d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 184 DGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred HhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 1100 0 0000 000 00000111111111110 1112235689999999999994 56999999
Q ss_pred HHHHHHHHHhCCCCchh
Q 002580 884 YLILVSKKFMEFQPFPI 900 (905)
Q Consensus 884 lGvil~elltg~~PF~~ 900 (905)
.|+|++-++++.+||--
T Consensus 264 ~GVI~Lslls~~~PFf~ 280 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFK 280 (418)
T ss_pred ccceeehhhcccccccc
Confidence 99999999999999843
No 401
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.91 E-value=2e-23 Score=220.06 Aligned_cols=185 Identities=37% Similarity=0.616 Sum_probs=160.4
Q ss_pred CceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCHHHHH
Q 002580 684 DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLL 763 (905)
Q Consensus 684 ~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l 763 (905)
+||.||+|.+..+++.+++|++........ ...+.+|+..++.++|+||+++++++......++++||+.+++|..++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 589999999988899999999876533221 578889999999999999999999999999999999999999999998
Q ss_pred hhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhcccc
Q 002580 764 DRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 843 (905)
Q Consensus 764 ~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~ 843 (905)
..... ++...+..++.+++.+|.|||+.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~--~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------------- 141 (244)
T smart00220 79 KKRGR--LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------------- 141 (244)
T ss_pred HhccC--CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---------------
Confidence 76433 8899999999999999999999999999999999999999999999999986543211
Q ss_pred CCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 844 GQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
......++..|++||.+.+ ..++|+||||+++|++++|..||..
T Consensus 142 -------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~ 188 (244)
T smart00220 142 -------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPG 188 (244)
T ss_pred -------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 1224467889999999863 4599999999999999999999965
No 402
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.90 E-value=4e-25 Score=246.34 Aligned_cols=195 Identities=26% Similarity=0.382 Sum_probs=172.8
Q ss_pred CCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.++|.++..+|.|+||.||+++++.+++..|+|+++.. ...+...++.|+-+++.++||||+.+++.|...+.+++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe---p~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE---PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeecc---CCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 35899999999999999999999999999999999854 445667788899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCC
Q 002580 751 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 751 ~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~ 830 (905)
||||.||+|.+...- ..++++.++..+++..+.||+|||++|-+|||||-.|||+++.|.+||.|||.+..+..
T Consensus 91 MEycgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita---- 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA---- 164 (829)
T ss_pred EEecCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh----
Confidence 999999999988754 46799999999999999999999999999999999999999999999999999866431
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCcccccccccc-----C-CCCchHHHHHHHHHHHHhCCCC
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF-----A-YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~-----~-~~~sDiwSlGvil~elltg~~P 897 (905)
......++.|||.|||||+-. + ...+|+|++|+...|+---++|
T Consensus 165 -----------------------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpp 214 (829)
T KOG0576|consen 165 -----------------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPP 214 (829)
T ss_pred -----------------------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCc
Confidence 122345789999999999987 3 4599999999999998776666
No 403
>PRK13560 hypothetical protein; Provisional
Probab=99.90 E-value=3.9e-23 Score=258.21 Aligned_cols=381 Identities=10% Similarity=0.055 Sum_probs=255.1
Q ss_pred cccccccchHHHH-HHHHHhhccceEEEeCCCCCCcE--EEcCHHHHHHcCCChhhhcCCC--CcccCCCCCChHHH---
Q 002580 182 GKEKGLPRVSDIV-KDALSTFQQTFVVSDATKPDYPI--MYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDV--- 253 (905)
Q Consensus 182 ~~~~~l~~~~~~l-~~ile~~~~~i~i~D~~~~dG~I--~~~N~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~--- 253 (905)
..+..+....+.+ +.+++++|+++++.+. +.+|.+ .+++++...++||...++++.. +..+.+|++....+
T Consensus 57 ~~~~~l~~~~e~~~r~l~~~~p~~i~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~d~~~~~~~~ 135 (807)
T PRK13560 57 IAEAEAQDCREQCERNLKANIPGGMFLFAL-DGDGTFSFPSLLDANGELAAIAKHDLMADKGLLAMLIGGDDGDFFFANP 135 (807)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCceEEEEEE-cCccccccceeeccchhHHHhcCcccCCccchhhhhcCCCcchhhhhCh
Confidence 3556666666777 9999999999999886 234443 3478888888999888877643 23455666554433
Q ss_pred ----HHHHHHHHcCCcEEEEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChhHHHH
Q 002580 254 ----AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIR 329 (905)
Q Consensus 254 ----~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~~l~~ 329 (905)
+.+..++..+.....+++.+++||+ |+.....|.++++|.+ .++|+++|||++|++|++|+..+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~e~r~~~~dg~--~~~~~~~~~~~~~g~~-~~~g~~~DIT~rk~ae~~l~~~~--------- 203 (807)
T PRK13560 136 FRSAETIAMALQSDDWQEEEGHFRCGDGR--FIDCCLRFERHAHADD-QVDGFAEDITERKRAEERIDEAL--------- 203 (807)
T ss_pred hhHHHHHHHHhccCcccceEEEEEeCCcc--EEEEEeeeeecCCCce-EEEEEEEccchHHHHHHHHHHHH---------
Confidence 2333444455666788888999996 6667788999988886 68999999999999998875321
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCC-ccccCCCCcccccCCCchhhhhhccccCccCCCCCCCcCCCCCCC--ccccccc
Q 002580 330 YDARQKEMATSSVTELVQAMKKPRS-LSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGG--CRTSMQR 406 (905)
Q Consensus 330 ~~~~~~~~~~~~~~~l~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~ 406 (905)
..+..+++...+... ...++....++......+|++.++++|+...++.++...+..... .......
T Consensus 204 ----------~~l~~l~e~~~~~i~~~d~~g~i~~~N~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (807)
T PRK13560 204 ----------HFLQQLLDNIADPAFWKDEDAKVFGCNDAACLACGFRREEIIGMSIHDFAPAQPADDYQEADAAKFDADG 273 (807)
T ss_pred ----------HHHHHHHhhCCCeEEEEcCCCCEEEEhHHHHHHhCCCHHHHcCCcchhcCCcchhHHHHHHHHHHhccCC
Confidence 112233444444322 234556666777777888999999999999888776443321100 0000011
Q ss_pred cccccccccccCCccccccccccccCCCCCCCccccchhccCCCCCCCCCCCCCchhhHHHHHhhhhc-ccHHHHHHhhc
Q 002580 407 ISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKG-IDLATTLERIE 485 (905)
Q Consensus 407 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~e~k~~e~~~~~~-~~l~~i~e~~~ 485 (905)
...+.....++.|...+.....+.. .+....+.........+||+++|..|++++++ .+|+.++++++
T Consensus 274 ~~~~e~~~~~~dG~~~~~~~~~~~~-----------~~~~~~g~~~g~~~~~~DITerk~~e~~L~~se~~l~~l~~~~~ 342 (807)
T PRK13560 274 SQIIEAEFQNKDGRTRPVDVIFNHA-----------EFDDKENHCAGLVGAITDISGRRAAERELLEKEDMLRAIIEAAP 342 (807)
T ss_pred ceEEEEEEEcCCCCEEEEEEEecce-----------EEEcCCCCEEEEEEEEEechHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 1122233445555555433221111 01111122222233458999999999998876 67899999999
Q ss_pred ccEEEEcCCCCCCCeEee-CHHHHHHcCCChhhhcCCCCCcCcCCCCCHH---------------H--HHHHHHHHHcCC
Q 002580 486 KNFVITDPRLPDNPIIFA-SDSFLELTEYSREEILGRNCRFLQGPETDPA---------------T--VRKIRAAIDNQT 547 (905)
Q Consensus 486 ~~i~i~D~~g~dg~I~~v-N~a~~~l~Gys~eEliGk~~~~l~~~~~~~~---------------~--~~~~~~~l~~g~ 547 (905)
++|+++|. +|.++++ |+++++++||+.+|++|++...+.+...... . ...+...+..+.
T Consensus 343 ~~i~~~d~---~g~i~~~nn~~~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (807)
T PRK13560 343 IAAIGLDA---DGNICFVNNNAAERMLGWSAAEVMGKPLPGMDPELNEEFWCGDFQEWYPDGRPMAFDACPMAKTIKGGK 419 (807)
T ss_pred ccEEEEcC---CCCEEEecCHHHHHHhCCCHHHHcCCCccccChhhhhhhhhchhhhcCCcCCcchhhhhhHHHHHhcCC
Confidence 99999999 5559987 6788889999999999998654433221111 0 011233355555
Q ss_pred cEE-EEEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccccC
Q 002580 548 DVT-VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 599 (905)
Q Consensus 548 ~~~-~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~ 599 (905)
.+. .++.+.+++|..+|+.+...|++|.+|.+++++++++|||++|++|+++
T Consensus 420 ~~~~~e~~~~~~~g~~~~~~~~~~p~~d~~g~~~~~~~~~~DITerk~~E~~L 472 (807)
T PRK13560 420 IFDGQEVLIEREDDGPADCSAYAEPLHDADGNIIGAIALLVDITERKQVEEQL 472 (807)
T ss_pred cccCceEEEEcCCCCeEEEEEEEeeeECCCCCEEEEEEEeehhhhHHHHHHHH
Confidence 543 4778889999999999999999999999999999999999999965443
No 404
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.90 E-value=5e-23 Score=246.03 Aligned_cols=207 Identities=24% Similarity=0.347 Sum_probs=170.2
Q ss_pred cccccCCCeeecccccccCceEEEEEEEcC-------CCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceE
Q 002580 666 GEQINLQHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPAL 737 (905)
Q Consensus 666 ~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~-------t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l 737 (905)
..++..++..+.+.||+|.||.|+++.... ....||||.++... ...+...+..|+++|+.+ .|+||+.+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~--~~~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENA--SSSEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEeccccc--CcHHHHHHHHHHHHHHHhcCCcchhhh
Confidence 345666677778899999999999997531 14579999988653 336778899999999998 69999999
Q ss_pred EEEEEeCCeEEEEEeccCCCCHHHHHhhCC------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCC
Q 002580 738 YASFQTKTHVCLITDYCPGGELFLLLDRQP------------T--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPE 803 (905)
Q Consensus 738 ~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~------------~--~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~ 803 (905)
++++...+.+++|+||+..|+|..++...+ . ..++......++.||+.|++||++..+|||||-..
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 999999999999999999999999998754 0 13888999999999999999999999999999999
Q ss_pred CEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccC--CccccccccccC---CCC
Q 002580 804 NVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG--TEEYIAPVSDFA---YTR 878 (905)
Q Consensus 804 NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--T~~Y~APE~l~~---~~~ 878 (905)
|||+..+..+||+|||+++......... .....+ ...|||||.+.. +.+
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~--------------------------~~~~~~~LP~kWmApEsl~~~~ft~k 501 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYR--------------------------TKSSAGTLPVKWMAPESLFDRVFTSK 501 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceE--------------------------ecCCCCccceeecCHHHhccCccccc
Confidence 9999999999999999997644222110 001112 235999999984 569
Q ss_pred chHHHHHHHHHHHH-hCCCCchh
Q 002580 879 MTRYNYLILVSKKF-MEFQPFPI 900 (905)
Q Consensus 879 sDiwSlGvil~ell-tg~~PF~~ 900 (905)
+|+||||++|||++ .|..||+.
T Consensus 502 SDVWSfGI~L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 502 SDVWSFGILLWEIFTLGGTPYPG 524 (609)
T ss_pred chhhHHHHHHHHHhhCCCCCCCC
Confidence 99999999999999 67899975
No 405
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.90 E-value=7.5e-24 Score=240.16 Aligned_cols=199 Identities=21% Similarity=0.224 Sum_probs=163.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCe----EEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQ----YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~----~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
..+..++||+|+||+||++.+...|+ +||+|++... ........+..|+-+|..++|||++++++++.... +.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~q 773 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQ 773 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HH
Confidence 34556889999999999998865554 6888887654 23445677889999999999999999999998765 88
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
||++|+++|+|.++++.++ ..+-....+.|..||++||.|||.+++|||||-..|||+..-..+||.|||+++....+.
T Consensus 774 lvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 774 LVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 9999999999999998764 458888889999999999999999999999999999999999999999999998876443
Q ss_pred CCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---CCCCchHHHHHHHHHHHH-hCCCCchh
Q 002580 829 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---AYTRMTRYNYLILVSKKF-MEFQPFPI 900 (905)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---~~~~sDiwSlGvil~ell-tg~~PF~~ 900 (905)
..... ....-.+.|||-|.+. ...++|||||||++||++ +|..||..
T Consensus 853 ~ey~~-------------------------~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~g 903 (1177)
T KOG1025|consen 853 KEYSA-------------------------PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDG 903 (1177)
T ss_pred ccccc-------------------------cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCC
Confidence 32110 0111235789999887 355999999999999999 68888754
No 406
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.8e-22 Score=224.01 Aligned_cols=174 Identities=22% Similarity=0.178 Sum_probs=132.6
Q ss_pred ccCCCeeecccccccCceEEEEEEEcC-CCeEEEEEEeecccc--cCHHHHHHHHHHHHHHHhCCCCCcce-EEEEEEeC
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVM--LNRNKVHRACAEREILDMLDHPFVPA-LYASFQTK 744 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~-t~~~vavK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~nIv~-l~~~~~~~ 744 (905)
...++|.+.+.||+|+||+||+|.+.. +++.+|||.+..... ........+.+|+++|+.++|+|++. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 346789999999999999999999876 678889998753311 12334567899999999999999885 5432
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCC-CCCCEEEcCCCcEEEEeccCccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDL-Kp~NILl~~~~~vkL~DFG~s~~ 823 (905)
+..|+|||||+|++|... .. .. ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|+.
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~-----~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP-----HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc-----cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 468999999999999632 11 11 1457889999999999999999999 99999999999999999999987
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF 874 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~ 874 (905)
........ .+. ....-...++++.|+|||.+.
T Consensus 162 ~~~~~~~~------------------~~~-~~~d~~~~~~~~~~~~pe~~~ 193 (365)
T PRK09188 162 FRRRGALY------------------RIA-AYEDLRHLLKHKRTYAPDALT 193 (365)
T ss_pred cccCcchh------------------hhh-hhhhhhhhhccCccCCcccCC
Confidence 64322111 000 001113567899999999998
No 407
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.4e-22 Score=201.28 Aligned_cols=208 Identities=22% Similarity=0.236 Sum_probs=173.6
Q ss_pred ccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCC
Q 002580 667 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT 745 (905)
Q Consensus 667 ~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~ 745 (905)
..+..++|.++++||+|+||.+|++....+|..||||+-.... ....+..|..+...|+ ...|+.+..++....
T Consensus 10 ~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-----~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ 84 (341)
T KOG1163|consen 10 ELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-----KHPQLLYESKVYRILQGGVGIPHIRHYGTEKD 84 (341)
T ss_pred hheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-----CCcchhHHHHHHHHhccCCCCchhhhhccccc
Confidence 3466789999999999999999999999999999999865432 2345677888998886 468899999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC---CCcEEEEeccCcc
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSC 822 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~---~~~vkL~DFG~s~ 822 (905)
+-.+||+++ |.+|.+++.-. ...|+..+++.++-|++.-++|+|.++++||||||+|+|+.- ...+.|+|||+|+
T Consensus 85 ynvlVMdLL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 85 YNVLVMDLL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred cceeeeecc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchh
Confidence 999999999 89999988754 345999999999999999999999999999999999999853 3579999999998
Q ss_pred ccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCch
Q 002580 823 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFP 899 (905)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~ 899 (905)
........ ...+........||..|.+=-...+ +.+.|+-|+|.+|.++.-|..||.
T Consensus 163 ky~d~~t~--------------------~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQ 222 (341)
T KOG1163|consen 163 KYRDIRTR--------------------QHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQ 222 (341)
T ss_pred hhcccccc--------------------ccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccc
Confidence 76532211 1234556667899999999877774 558899999999999999999997
Q ss_pred hh
Q 002580 900 IL 901 (905)
Q Consensus 900 ~~ 901 (905)
.+
T Consensus 223 gl 224 (341)
T KOG1163|consen 223 GL 224 (341)
T ss_pred cc
Confidence 54
No 408
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.88 E-value=2.5e-21 Score=198.78 Aligned_cols=182 Identities=35% Similarity=0.550 Sum_probs=155.8
Q ss_pred ccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCH
Q 002580 680 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGEL 759 (905)
Q Consensus 680 Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L 759 (905)
||.|.+|.||++....+++.+++|++....... ....+.+|+.+++.+.|++|+++++++......++++|++.|++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999987653211 346788999999999999999999999998999999999999999
Q ss_pred HHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-CCcEEEEeccCccccCCCCCCCCCcchhh
Q 002580 760 FLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSCKPQLLLPTTNEK 838 (905)
Q Consensus 760 ~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-~~~vkL~DFG~s~~~~~~~~~~~~~~~~~ 838 (905)
.+++.... ..++...+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||.+........
T Consensus 79 ~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------- 148 (215)
T cd00180 79 KDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------- 148 (215)
T ss_pred HHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------
Confidence 99987642 34889999999999999999999999999999999999998 89999999999865431110
Q ss_pred hccccCCCCcccccccccccccccCCccccccccccCC----CCchHHHHHHHHHHH
Q 002580 839 KRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY----TRMTRYNYLILVSKK 891 (905)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~----~~sDiwSlGvil~el 891 (905)
......+...|++||.+... .+.|+|++|++++++
T Consensus 149 ------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l 187 (215)
T cd00180 149 ------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187 (215)
T ss_pred ------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence 12234578899999998754 689999999999988
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=5.2e-22 Score=205.68 Aligned_cols=207 Identities=21% Similarity=0.254 Sum_probs=174.7
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCCe
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 746 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 746 (905)
.+..-+|++.++||+|+||.++.+.+.-+++.||||.-+.. ....++.-|....+.| ..++|+.+|-+.+++.+
T Consensus 24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~ 98 (449)
T KOG1165|consen 24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKY 98 (449)
T ss_pred eEecccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccch
Confidence 34556899999999999999999999999999999976543 2345677788888887 57999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-----CcEEEEeccCc
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 821 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-----~~vkL~DFG~s 821 (905)
-.||+|++ |.+|.+++.-++ ..|+.+.+..++.|++.-++|+|++.+|+|||||+|+||..- ..+.|+|||++
T Consensus 99 NiLVidLL-GPSLEDLFD~Cg-R~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 99 NILVIDLL-GPSLEDLFDLCG-RRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhhhhhh-CcCHHHHHHHhc-CcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 99999999 899999988664 459999999999999999999999999999999999999643 36899999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
+....+.... ..+.....+..||..||+=....| +.+-|+-|||-++++++-|.+||
T Consensus 177 K~YrDp~Tkq--------------------HIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPW 236 (449)
T KOG1165|consen 177 KEYRDPKTKQ--------------------HIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 236 (449)
T ss_pred hhhcCccccc--------------------cCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcc
Confidence 8765433221 234556667889999999888886 45789999999999999999999
Q ss_pred hhh
Q 002580 899 PIL 901 (905)
Q Consensus 899 ~~~ 901 (905)
..+
T Consensus 237 QGL 239 (449)
T KOG1165|consen 237 QGL 239 (449)
T ss_pred ccc
Confidence 654
No 410
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=3.9e-21 Score=213.41 Aligned_cols=209 Identities=23% Similarity=0.239 Sum_probs=166.6
Q ss_pred CeeecccccccCceEEEEEEEcCCC-eEEEEEEeecccccCHHHHHHHHHHHHHHHhCC----CCCcceEEEEE-EeCCe
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----HPFVPALYASF-QTKTH 746 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~-~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~----h~nIv~l~~~~-~~~~~ 746 (905)
+|.+.+.||+|+||.||.|.+..++ ..+|+|+........ ...+..|..++..+. .++++.+++.+ ....+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 8999999999999999999997774 678999876542111 115677888888886 36899999999 57889
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-----CcEEEEeccCc
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-----GHVSLTDFDLS 821 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-----~~vkL~DFG~s 821 (905)
.|+||+.+ |.+|.++....+...++..++..|+.|++.+|.+||+.|++||||||+|+++... ..+.|+|||++
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99999999 9999999877766789999999999999999999999999999999999999754 46999999999
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCc
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF 898 (905)
+......... . ....+-.....+.||..|+++.+..+ ..+.|+||++.++.+++.|..||
T Consensus 175 r~~~~~~~~~-----~------------~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW 237 (322)
T KOG1164|consen 175 RRFKYVGDSG-----G------------NLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW 237 (322)
T ss_pred ccccccCCCC-----c------------ccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence 7322110000 0 00001111245779999999999986 45889999999999999999999
Q ss_pred hhhh
Q 002580 899 PILC 902 (905)
Q Consensus 899 ~~~~ 902 (905)
....
T Consensus 238 ~~~~ 241 (322)
T KOG1164|consen 238 EALE 241 (322)
T ss_pred cccc
Confidence 6554
No 411
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.86 E-value=8.6e-21 Score=237.02 Aligned_cols=240 Identities=20% Similarity=0.316 Sum_probs=195.3
Q ss_pred HHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCC----cE
Q 002580 191 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ----SY 266 (905)
Q Consensus 191 ~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~----~~ 266 (905)
...+..+++.++++++++|. +|+|++||++|++++||+++|++|+++..+.+++........+......+. .+
T Consensus 11 ~~~~~~~le~~~~~i~~~d~---~g~i~~~N~~~~~l~G~s~eeliG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (799)
T PRK11359 11 DGIFFPALEQNMMGAVLINE---NDEVLFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGM 87 (799)
T ss_pred hhhHHHHHHhhcCcEEEEcC---CCeEEEEcHHHHHHhCCCHHHHcCCCHHHhcCccccccchHHHhhhhccCCcccccc
Confidence 34567789999999999998 999999999999999999999999998877776655544444554444433 24
Q ss_pred EEEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 002580 267 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELV 346 (905)
Q Consensus 267 ~~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~ 346 (905)
..+++.+++||+.+|+.++..|+. .+|.. +++++.+|||++++.+++++.
T Consensus 88 ~~e~~~~~~dG~~~~v~~~~~~~~-~~g~~-~~~~~~~DiT~~~~~~~~~~~---------------------------- 137 (799)
T PRK11359 88 SRELQLEKKDGSKIWTRFALSKVS-AEGKV-YYLALVRDASVEMAQKEQTRQ---------------------------- 137 (799)
T ss_pred ceeeEEecCCcCEEEEEEEeeeec-cCCce-EEEEEEeeccchhhhHHHHHH----------------------------
Confidence 457888899999999999998874 45554 578999999987655433210
Q ss_pred HHccCCCCccccCCCCcccccCCCchhhhhhccccCccCCCCCCCcCCCCCCCccccccccccccccccccCCccccccc
Q 002580 347 QAMKKPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGL 426 (905)
Q Consensus 347 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 426 (905)
T Consensus 138 -------------------------------------------------------------------------------- 137 (799)
T PRK11359 138 -------------------------------------------------------------------------------- 137 (799)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCccccchhccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhhcccEEEEcCCCCCCCeEeeCHH
Q 002580 427 IGRKSQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDS 506 (905)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~e~k~~e~~~~~~~~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a 506 (905)
+..++++++++++++|. +|+++++|++
T Consensus 138 --------------------------------------------------~~~~~~~~~~~i~~~d~---~g~i~~~N~~ 164 (799)
T PRK11359 138 --------------------------------------------------LIIAVDHLDRPVIVLDP---ERRIVQCNRA 164 (799)
T ss_pred --------------------------------------------------HHHHHhcCCCcEEEEcC---CCcEEEEChh
Confidence 45678999999999999 5669999999
Q ss_pred HHHHcCCChhhhcCCCCCcCc-CCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEE
Q 002580 507 FLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGV 585 (905)
Q Consensus 507 ~~~l~Gys~eEliGk~~~~l~-~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i 585 (905)
+++++||+.++++|++...+. ++.........+...+..+..+..+.+..+++|..+|+.++..|+.|.+|.+.+++++
T Consensus 165 ~~~l~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~ 244 (799)
T PRK11359 165 FTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMT 244 (799)
T ss_pred hHhhhCCCHHHHCCCChHHhcCCCCCcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEE
Confidence 999999999999999876554 4555555666667777777778888899999999999999999999999999999999
Q ss_pred eecCccccccc
Q 002580 586 QLDGSEHLEPL 596 (905)
Q Consensus 586 ~~DITerk~~e 596 (905)
++|||++|+.+
T Consensus 245 ~~DITerk~~e 255 (799)
T PRK11359 245 FSDITEERQIR 255 (799)
T ss_pred eehhhhHHHHH
Confidence 99999999853
No 412
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.86 E-value=1.1e-21 Score=230.40 Aligned_cols=245 Identities=20% Similarity=0.304 Sum_probs=191.7
Q ss_pred HHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 002580 191 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 270 (905)
Q Consensus 191 ~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 270 (905)
.+.++.++++++++++++|. +|+++++|++|++++||++++++|++...+.++.........+++.+..+..+..++
T Consensus 3 ~~~~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (494)
T TIGR02938 3 PEAYRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKL 79 (494)
T ss_pred hHHHHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCccccee
Confidence 35789999999999999999 999999999999999999999999987766666666677788888888888888888
Q ss_pred EEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHcc
Q 002580 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMK 350 (905)
Q Consensus 271 ~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~al~ 350 (905)
..++++|..+|+..++.|+++.+|.+.+++++++|||++++++++++..
T Consensus 80 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~~l~~~------------------------------- 128 (494)
T TIGR02938 80 LNRRKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQVVANQ------------------------------- 128 (494)
T ss_pred eccCCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHHHHHHH-------------------------------
Confidence 8889999999999999999999999999999999999999988775320
Q ss_pred CCCCccccCCCCcccccCCCchhhhhhccccCccCCCCCCCcCCCCCCCccccccccccccccccccCCccccccccccc
Q 002580 351 KPRSLSESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRK 430 (905)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 430 (905)
T Consensus 129 -------------------------------------------------------------------------------- 128 (494)
T TIGR02938 129 -------------------------------------------------------------------------------- 128 (494)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCccccchhccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHH
Q 002580 431 SQSTDDHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLEL 510 (905)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~di~e~k~~e~~~~~~~~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l 510 (905)
+ ..|+.++++++++++++|. +|.++++|++|+++
T Consensus 129 -------------------------------------~------~~~~~~~~~~~~~i~~~d~---~~~i~~~N~~~~~~ 162 (494)
T TIGR02938 129 -------------------------------------K------LLIESVVDAAPVAFVLLDP---TGRVILDNQEYKKL 162 (494)
T ss_pred -------------------------------------H------HHHHHHHhcccceEEEEcC---CCCEEEechhHHHh
Confidence 0 1168899999999999999 56699999999999
Q ss_pred cCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcE-EEEEEEEecCCc-EEEEEEEEeeeecCCCCE---------
Q 002580 511 TEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDV-TVQLINYTKSGK-KFWNLFHLQPMRDQKGEV--------- 579 (905)
Q Consensus 511 ~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~-~~e~~~~~kdG~-~~wv~~~~~pi~d~~G~i--------- 579 (905)
+|+...+..+.....+.+++..... ......+..+ ..+......+|. .+|+.....|+.+..|.+
T Consensus 163 ~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (494)
T TIGR02938 163 ATDLRVKEPAHTVLDLLREAWREAL----AENWPQQLAFSNREARFDRGGGRPARWLSCTGSVIGMESDCADSFFCAAEQ 238 (494)
T ss_pred hchhhhhHHHHHHHHHhhHHhhhhh----hhcchhhhccccceeeeccCCCceeeEEEecCceEEeecchhhheeccCCC
Confidence 9999888777654444433322221 1111111122 223444455555 789998888887766554
Q ss_pred EEEEEEeecCcccccccccC
Q 002580 580 QYFIGVQLDGSEHLEPLRNS 599 (905)
Q Consensus 580 ~~~i~i~~DITerk~~e~~~ 599 (905)
.+++++++|||++|++++++
T Consensus 239 ~~~~~~~~DITe~k~~ee~l 258 (494)
T TIGR02938 239 PYLLLTIADISNLREEQERA 258 (494)
T ss_pred chheehHHHHHHHHHHHHHH
Confidence 34567899999999976544
No 413
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=3.5e-20 Score=189.27 Aligned_cols=142 Identities=16% Similarity=0.167 Sum_probs=110.4
Q ss_pred cccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHH-----------------------HHHHHHHHHHHHhCCCCC
Q 002580 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-----------------------VHRACAEREILDMLDHPF 733 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~-----------------------~~~~~~E~~il~~l~h~n 733 (905)
...||+|+||.||+|.+. +|+.||+|+++......... ......|+.++..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999996 89999999998653211110 122345999999998887
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeCCCCCCCEEEcCCCc
Q 002580 734 VPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPENVLLQGNGH 812 (905)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~L-H~~gIvHrDLKp~NILl~~~~~ 812 (905)
+...+.+... ..+|||||++|+++....... ..++...+..++.|++.+|.+| |+.||+||||||+|||++ ++.
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCc
Confidence 7544433222 238999999887776543332 4588999999999999999999 799999999999999998 578
Q ss_pred EEEEeccCcccc
Q 002580 813 VSLTDFDLSCLT 824 (905)
Q Consensus 813 vkL~DFG~s~~~ 824 (905)
++|+|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999999653
No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.81 E-value=6.9e-19 Score=192.72 Aligned_cols=204 Identities=32% Similarity=0.458 Sum_probs=168.9
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCC-CcceEEEEEEeCCeEEEEEe
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP-FVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~-nIv~l~~~~~~~~~~~lV~E 752 (905)
|.+.+.||.|+|+.||.+.+. ..+++|.+.............+.+|+.++..+.|+ +|+.+++++......+++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 778889999999999999996 77899999876544444567889999999999988 79999999988888899999
Q ss_pred ccCCCCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC-cEEEEeccCccccCCCCCC
Q 002580 753 YCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQL 830 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~-~vkL~DFG~s~~~~~~~~~ 830 (905)
++.+++|.+++..... ..+.......++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||++.........
T Consensus 79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 9999999977765431 2589999999999999999999999999999999999999988 7999999998643321110
Q ss_pred CCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 831 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 831 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.. ........+||..|+|||.+.+ ....|+||+|++++++++|..||...
T Consensus 159 ~~---------------------~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~ 214 (384)
T COG0515 159 SS---------------------IPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGE 214 (384)
T ss_pred cc---------------------ccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 00 0012456789999999999864 34889999999999999999997654
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=1.3e-19 Score=187.42 Aligned_cols=143 Identities=17% Similarity=0.189 Sum_probs=117.9
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHH------HHHHHHHHHhCCCCCcceEEEEEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHR------ACAEREILDMLDHPFVPALYASFQ 742 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~------~~~E~~il~~l~h~nIv~l~~~~~ 742 (905)
+-.++|++++.||.|+||.||++.. ++..+|+|++.......+..... +.+|+..+.++.|++|+.+.+++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 4467999999999999999999765 46689999998765444444444 578999999999999999998866
Q ss_pred eC--------CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEE
Q 002580 743 TK--------THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 814 (905)
Q Consensus 743 ~~--------~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vk 814 (905)
.. +..+|+|||++|.+|.++.. +++ ....+++.+|..||+.|++|||+||+||+++.+| ++
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~ 174 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LR 174 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EE
Confidence 43 35899999999999987732 333 2456899999999999999999999999999988 99
Q ss_pred EEeccCcccc
Q 002580 815 LTDFDLSCLT 824 (905)
Q Consensus 815 L~DFG~s~~~ 824 (905)
|+|||.+...
T Consensus 175 liDfg~~~~~ 184 (232)
T PRK10359 175 IIDLSGKRCT 184 (232)
T ss_pred EEECCCcccc
Confidence 9999987543
No 416
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.80 E-value=2.5e-19 Score=189.02 Aligned_cols=207 Identities=15% Similarity=0.117 Sum_probs=160.3
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCC-----eEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 742 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~-----~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 742 (905)
.+...++++...+-+|.||.||.|.+++.. +.+-+|.++.. ..+-....+..|.-.+..+.|||+..+.+++.
T Consensus 280 ~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 280 TVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 344567888999999999999999765432 23445555432 34456677888888888889999999999876
Q ss_pred e-CCeEEEEEeccCCCCHHHHHhhC------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEE
Q 002580 743 T-KTHVCLITDYCPGGELFLLLDRQ------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 815 (905)
Q Consensus 743 ~-~~~~~lV~E~~~gg~L~~~l~~~------~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL 815 (905)
. ....++++.++.-|+|..++... ....++..+...++.|++.|+.|||++||||.||-..|.+|++.-++||
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 4 46788899999889999999832 2234667778889999999999999999999999999999999999999
Q ss_pred EeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHH
Q 002580 816 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKF 892 (905)
Q Consensus 816 ~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ell 892 (905)
+|-.+++.+=...-.. .....-....||+||.+.. +.++|+||||++||||+
T Consensus 438 tDsaLSRDLFP~DYhc-------------------------LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELm 492 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHC-------------------------LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELM 492 (563)
T ss_pred ccchhccccCcccccc-------------------------cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHH
Confidence 9999987643221111 1111123458999999983 56999999999999999
Q ss_pred -hCCCCchhh
Q 002580 893 -MEFQPFPIL 901 (905)
Q Consensus 893 -tg~~PF~~~ 901 (905)
.|+.||..+
T Consensus 493 tlg~~PyaeI 502 (563)
T KOG1024|consen 493 TLGKLPYAEI 502 (563)
T ss_pred hcCCCCcccc
Confidence 588898653
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=5.4e-19 Score=180.92 Aligned_cols=142 Identities=18% Similarity=0.155 Sum_probs=112.0
Q ss_pred cccccccCceEEEEEEEcCCCeEEEEEEeecccccCH-----------------------HHHHHHHHHHHHHHhCCCCC
Q 002580 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----------------------NKVHRACAEREILDMLDHPF 733 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~-----------------------~~~~~~~~E~~il~~l~h~n 733 (905)
.+.||+|++|.||+|.+. +|+.||||++........ .....+..|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 568999999999999987 899999999987531100 00223457899999999998
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCCHHHH-HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCC
Q 002580 734 VPALYASFQTKTHVCLITDYCPGGELFLL-LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 811 (905)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~-l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~ 811 (905)
+.....+.... .||||||++|+++... +.. ..++...+..++.|++.+|.+||+ +||+||||||+|||++ ++
T Consensus 81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CC
Confidence 75544433332 4899999988755433 332 347888999999999999999999 9999999999999999 89
Q ss_pred cEEEEeccCccccC
Q 002580 812 HVSLTDFDLSCLTS 825 (905)
Q Consensus 812 ~vkL~DFG~s~~~~ 825 (905)
.++|+|||++....
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999997654
No 418
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.80 E-value=5.4e-20 Score=228.50 Aligned_cols=171 Identities=15% Similarity=0.130 Sum_probs=115.4
Q ss_pred CCC-CCcceEEEEE-------EeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCC
Q 002580 729 LDH-PFVPALYASF-------QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 800 (905)
Q Consensus 729 l~h-~nIv~l~~~~-------~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDL 800 (905)
+.| +||..++++| .....++++|||+ +++|.+++... ...+++..+..|+.||+.||.|||++||+||||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 344 4666777766 2334678888988 77999999753 345999999999999999999999999999999
Q ss_pred CCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccC--------CCCcccccccccccccccCCcccccccc
Q 002580 801 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKG--------QQNPVFMAEPMRASNSFVGTEEYIAPVS 872 (905)
Q Consensus 801 Kp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~gT~~Y~APE~ 872 (905)
||+||||+..|.+|++|||++...................+... .................+||+.|||||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 99999998877888888777654322111000000000000000 0000000000011123578999999999
Q ss_pred ccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 873 DFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 873 l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
+.+ ..++|||||||+||||++|.+||...
T Consensus 187 ~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~ 218 (793)
T PLN00181 187 DNGSSSNCASDVYRLGVLLFELFCPVSSREEK 218 (793)
T ss_pred hccCCCCchhhhhhHHHHHHHHhhCCCchhhH
Confidence 874 56999999999999999999998743
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=2.4e-18 Score=174.23 Aligned_cols=195 Identities=20% Similarity=0.167 Sum_probs=137.1
Q ss_pred eecccccccCceEEEEEEEcCCCeEEEEEEeecccccC-HHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEe
Q 002580 675 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 675 ~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~-~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~E 752 (905)
.+...|++|+||+||.+.. .+..++.+.+....... .-....+.+|+++|++|. |++|++++++ +..|++|+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3556899999999997776 66777777665432211 112235789999999995 5889999886 45799999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCC-CCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL-KPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDL-Kp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|+.|.+|...+.. . ...++.|++.+|.+||++||+|||| ||+|||++.+|.++|+|||++..........
T Consensus 79 yI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 79 YLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred eecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 9999998654321 1 1346789999999999999999999 7999999999999999999997543211100
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccCC-----CCchHHHHHHHHHHHHhCCCCc
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAY-----TRMTRYNYLILVSKKFMEFQPF 898 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~-----~~sDiwSlGvil~elltg~~PF 898 (905)
..-.....+ .. ...-...++.|++|+.-... ...+.++.|+.+|.++|+..|+
T Consensus 150 -r~L~~rDl~------------~l-lk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 150 -RLLAREDLR------------HL-LKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred -HHHHHHHHH------------HH-HHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 000000000 00 00112367888999776532 3557789999999999999886
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=5.5e-20 Score=206.83 Aligned_cols=188 Identities=37% Similarity=0.531 Sum_probs=161.0
Q ss_pred cccccCceEEEEEEE---cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEEEEEecc
Q 002580 679 PLGSGDTGSVHLVEL---CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYC 754 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~---~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~E~~ 754 (905)
.+|+|.||.|+++.. ...+..||+|++++......... ....|..++..++ ||++++++..|+.+...++++++.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 379999999998764 34578899999988755444443 5667888888886 999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCc
Q 002580 755 PGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPT 834 (905)
Q Consensus 755 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~ 834 (905)
.||.|+..+... ..+.+.....+...++.+++++|+.+|+|||+|++||+++.+|.+++.|||+++..-
T Consensus 80 rgg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v--------- 148 (612)
T KOG0603|consen 80 RGGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV--------- 148 (612)
T ss_pred ccchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhH---------
Confidence 999999888664 347888888889999999999999999999999999999999999999999986532
Q ss_pred chhhhccccCCCCcccccccccccccccCCcccccccccc-CCCCchHHHHHHHHHHHHhCCCCchh
Q 002580 835 TNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF-AYTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~-~~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
.....|||..|||||++. +....|.||||+++|+|++|..||..
T Consensus 149 ----------------------~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 149 ----------------------KEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ----------------------hhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence 011129999999999999 57799999999999999999999965
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=7.2e-18 Score=173.97 Aligned_cols=137 Identities=23% Similarity=0.255 Sum_probs=107.4
Q ss_pred ecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-----CCCCcceEEEEEEeCC---eE
Q 002580 676 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-----DHPFVPALYASFQTKT---HV 747 (905)
Q Consensus 676 i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-----~h~nIv~l~~~~~~~~---~~ 747 (905)
-.+.||+|+||.||. ++.++.. +||++.... ......+.+|+.+++.+ .||||+++|+++.++. .+
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~---~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG---DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEeccc---cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 346899999999995 7667665 689886532 22346789999999999 5799999999999873 44
Q ss_pred E-EEEec--cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeeCCCCCCCEEEcC----CCcEEEEe-c
Q 002580 748 C-LITDY--CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVAL-EYLHCQGIIYRDLKPENVLLQG----NGHVSLTD-F 818 (905)
Q Consensus 748 ~-lV~E~--~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL-~~LH~~gIvHrDLKp~NILl~~----~~~vkL~D-F 818 (905)
+ +|||| +.+++|.+++.+. .+++. ..++.|++.++ +|||+++|+||||||+|||++. ++.++|+| |
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 4 78999 5579999999663 25655 35577888777 8999999999999999999974 34799999 5
Q ss_pred cCccc
Q 002580 819 DLSCL 823 (905)
Q Consensus 819 G~s~~ 823 (905)
|....
T Consensus 155 G~~~~ 159 (210)
T PRK10345 155 GESTF 159 (210)
T ss_pred CCcce
Confidence 55433
No 422
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.75 E-value=3.4e-19 Score=210.55 Aligned_cols=203 Identities=23% Similarity=0.322 Sum_probs=157.8
Q ss_pred eecccccccCceEEEEEEEcCCCeEEEEEEeec---ccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 675 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDK---GVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 675 ~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~---~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
.....+|.|.+|.|+.+........++.|.+.. ...........+..|+-+-..+.|+|++..+..+.+....+-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 456678999999888888876666666665442 11111222222556666677789999887776666555555559
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|||++ +|+.++... ..+....+..++.|++.|++|||+.||.||||||+|+++..+|.+||+|||.+......-.
T Consensus 401 E~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e-- 475 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE-- 475 (601)
T ss_pred hcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc--
Confidence 99999 999999875 3488899999999999999999999999999999999999999999999999865432111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC----CCCchHHHHHHHHHHHHhCCCCchhhhc
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPILCR 903 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~~~r 903 (905)
........++|+..|+|||++.+ -...|+||.|++++.|++|++||....+
T Consensus 476 ---------------------~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~ 530 (601)
T KOG0590|consen 476 ---------------------KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKK 530 (601)
T ss_pred ---------------------hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccc
Confidence 11234567899999999999985 2388999999999999999999987654
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=4e-17 Score=172.46 Aligned_cols=146 Identities=20% Similarity=0.144 Sum_probs=114.2
Q ss_pred CeeecccccccCceEEEEEE-EcCCCeEEEEEEeecccccC-------------------HH--HHHHHHHHHHHHHhCC
Q 002580 673 HFRPIKPLGSGDTGSVHLVE-LCGSGQYFAMKAMDKGVMLN-------------------RN--KVHRACAEREILDMLD 730 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~-~~~t~~~vavK~~~~~~~~~-------------------~~--~~~~~~~E~~il~~l~ 730 (905)
.|.+.+.||+|++|.||+|. +..+|+.||+|++....... .. ....+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47888999999999999999 66789999999987642110 00 1134568999999997
Q ss_pred CC--CcceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeeCCCCCCCEEE
Q 002580 731 HP--FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG-IIYRDLKPENVLL 807 (905)
Q Consensus 731 h~--nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~g-IvHrDLKp~NILl 807 (905)
+. .+++++.. ...++||||++|.+|....... ..+....+..++.||+.+|.+||++| |+||||||+||++
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli 182 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILV 182 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEE
Confidence 53 34555543 2358999999988887654322 33566677889999999999999999 9999999999999
Q ss_pred cCCCcEEEEeccCccccC
Q 002580 808 QGNGHVSLTDFDLSCLTS 825 (905)
Q Consensus 808 ~~~~~vkL~DFG~s~~~~ 825 (905)
+ ++.++|+|||.+....
T Consensus 183 ~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 183 H-DGKVVIIDVSQSVELD 199 (237)
T ss_pred E-CCCEEEEEChhhhccC
Confidence 9 8899999999987544
No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=2e-17 Score=198.87 Aligned_cols=195 Identities=21% Similarity=0.276 Sum_probs=154.7
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC---CCCcceEEEEEEeC
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTK 744 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~ 744 (905)
++....|.|-+.||+|+||+||+|.... |+.||+|+-++..... |.-=.+++.+|+ -+.|..++..+...
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE------fYI~~q~~~RLk~~~~~~~~~~~~a~~~~ 766 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE------FYICLQVMERLKPQMLPSIMHISSAHVFQ 766 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee------eeehHHHHHhhchhhhcchHHHHHHHccC
Confidence 4556789999999999999999999976 9999999877653222 111122333333 24556666666677
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEc-------CCCcEEEEe
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-------GNGHVSLTD 817 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~-------~~~~vkL~D 817 (905)
+..++|++|.+-|+|.+++. ..+.+++..++.+..|++.-+++||..+|||+||||+|+||. ..-.++|+|
T Consensus 767 ~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID 844 (974)
T KOG1166|consen 767 NASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID 844 (974)
T ss_pred CcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence 78899999999999999997 456799999999999999999999999999999999999994 233699999
Q ss_pred ccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhC
Q 002580 818 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFME 894 (905)
Q Consensus 818 FG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg 894 (905)
||.+..... ..........++|-.+-.+|+..| ....|.|.|+.+++.|++|
T Consensus 845 fG~siDm~l-------------------------fp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 845 FGRSIDMKL-------------------------FPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred cccceeeeE-------------------------cCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 999865431 112234456789999999999995 5699999999999999999
Q ss_pred CC
Q 002580 895 FQ 896 (905)
Q Consensus 895 ~~ 896 (905)
++
T Consensus 900 ~y 901 (974)
T KOG1166|consen 900 KY 901 (974)
T ss_pred HH
Confidence 74
No 425
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.70 E-value=2.3e-17 Score=174.75 Aligned_cols=208 Identities=19% Similarity=0.223 Sum_probs=145.5
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCe-----------------------------------EEEEEEeecccccC
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----------------------------------YFAMKAMDKGVMLN 712 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~-----------------------------------~vavK~~~~~~~~~ 712 (905)
.|.+++|.+...||+|....||.+.....|. +.|||.+-.-...+
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 4678899999999999999999987643221 24555543221111
Q ss_pred --HHHHHHHHHHHH-------H-------HH-------h-CCCCCcceEEEEEEe-------------------------
Q 002580 713 --RNKVHRACAERE-------I-------LD-------M-LDHPFVPALYASFQT------------------------- 743 (905)
Q Consensus 713 --~~~~~~~~~E~~-------i-------l~-------~-l~h~nIv~l~~~~~~------------------------- 743 (905)
....+...+|.- . .+ + -+|||||.+..+|.+
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~ 312 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGA 312 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccccc
Confidence 011111112210 0 01 1 269999999887743
Q ss_pred --CCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEE--cCCC--cEEEEe
Q 002580 744 --KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--QGNG--HVSLTD 817 (905)
Q Consensus 744 --~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl--~~~~--~vkL~D 817 (905)
...+|+||..+ ..+|..++..+. .+......|+.|+++|+.|||.+||.|||||.+|||+ ++|+ .+.|+|
T Consensus 313 g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaD 388 (598)
T KOG4158|consen 313 GEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVAD 388 (598)
T ss_pred CCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcc
Confidence 23489999988 579999997643 6777788899999999999999999999999999998 4444 578999
Q ss_pred ccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc---------CCCCchHHHHHHHH
Q 002580 818 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF---------AYTRMTRYNYLILV 888 (905)
Q Consensus 818 FG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~---------~~~~sDiwSlGvil 888 (905)
||+|--... ..... +.....-..-|+..-||||+.. .|.++|.|+.|.+.
T Consensus 389 FGCcLAd~~-hGlql--------------------py~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~Gala 447 (598)
T KOG4158|consen 389 FGCCLADDN-HGLQL--------------------PYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALA 447 (598)
T ss_pred cceeeeccc-ccccc--------------------ccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhH
Confidence 998743211 01110 0111122345777889999987 36799999999999
Q ss_pred HHHHhCCCCchh
Q 002580 889 SKKFMEFQPFPI 900 (905)
Q Consensus 889 ~elltg~~PF~~ 900 (905)
||++....||+.
T Consensus 448 YEIfg~~NPFY~ 459 (598)
T KOG4158|consen 448 YEIFGRSNPFYK 459 (598)
T ss_pred HHHhccCCcccc
Confidence 999999999975
No 426
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.70 E-value=5.1e-17 Score=163.83 Aligned_cols=103 Identities=19% Similarity=0.171 Sum_probs=88.6
Q ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcch
Q 002580 757 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTN 836 (905)
Q Consensus 757 g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~ 836 (905)
|+|.+++... ...+++..++.|+.||+.||.|||+++ ||+|||++.++.+|+ ||++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~---------- 61 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP---------- 61 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc----------
Confidence 6899999764 345999999999999999999999998 999999999999999 999865321
Q ss_pred hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchh
Q 002580 837 EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~ 900 (905)
....||+.|||||++.+ ..++|||||||++|+|++|..||..
T Consensus 62 ----------------------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~ 106 (176)
T smart00750 62 ----------------------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNE 106 (176)
T ss_pred ----------------------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccc
Confidence 11258899999999974 4589999999999999999999964
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=4.3e-16 Score=162.17 Aligned_cols=137 Identities=21% Similarity=0.233 Sum_probs=114.7
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCH-----HHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~-----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
+.||+|++|.||+|.. .|..+++|.......... .....+.+|+.++..+.|++|+....++.+....+++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5789999999999987 677899998664332221 123457789999999999998877777777788999999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
|++|++|.+++... .. ....++.+++.+|.+||+.|++|+|++|.|||++ ++.++|+|||++..
T Consensus 80 ~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999998653 12 7788999999999999999999999999999999 78999999999865
No 428
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.66 E-value=3e-16 Score=167.23 Aligned_cols=198 Identities=18% Similarity=0.193 Sum_probs=128.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC----------CCCcceEEEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD----------HPFVPALYASFQ 742 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~----------h~nIv~l~~~~~ 742 (905)
.+.....||.|+++.||.+++..|++.+|+|++...........+.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 4677889999999999999999999999999987655444455666666654443322 112222223221
Q ss_pred ---------eC---C-----eEEEEEeccCCCCHHHHHhh---CCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeeCCC
Q 002580 743 ---------TK---T-----HVCLITDYCPGGELFLLLDR---QPTK--VLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 800 (905)
Q Consensus 743 ---------~~---~-----~~~lV~E~~~gg~L~~~l~~---~~~~--~l~~~~~~~i~~qil~gL~~LH~~gIvHrDL 800 (905)
.. . +.+++|+-+ .++|..++.- .... .+.......+..|+++.+++||+.|++|+||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi 171 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI 171 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence 11 1 246788887 5788777542 1111 1223333456689999999999999999999
Q ss_pred CCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC-----
Q 002580 801 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA----- 875 (905)
Q Consensus 801 Kp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~----- 875 (905)
||+|++++.+|.++|+||+.....+.. ......+..|.+||....
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~------------------------------~~~~~~~~~~~PPe~~~~~~~~~ 221 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGTR------------------------------YRCSEFPVAFTPPELESCAGQFG 221 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTEE------------------------------EEGGGS-TTTS-HHHHHHHTSCH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCce------------------------------eeccCCCcccCChhhhhhhcccC
Confidence 999999999999999999876443210 000223467888887642
Q ss_pred ------CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 876 ------YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 876 ------~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
+.+.|.|+||+++|.|.+|..||...
T Consensus 222 ~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~ 253 (288)
T PF14531_consen 222 QNNAPYTFATDAWQLGITLYSLWCGRLPFGLS 253 (288)
T ss_dssp HSEEEE-HHHHHHHHHHHHHHHHHSS-STCCC
T ss_pred cccceeeeccCHHHHHHHHHHHHHccCCCCCC
Confidence 33779999999999999999999754
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=9.6e-16 Score=158.03 Aligned_cols=133 Identities=18% Similarity=0.197 Sum_probs=107.5
Q ss_pred cccccCceEEEEEEEcCCCeEEEEEEeecccccC-----HHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEec
Q 002580 679 PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 679 ~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
.||+|+||.||++.. ++..+++|......... .....++.+|+.++..+.|+++.....++...+..+++|||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 479999999999985 67789999865432211 11235677899999999888765555555566678999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
++|++|.+++.... . .++.+++.+|.+||+.|++|+|++|+||+++ ++.++++|||++..
T Consensus 79 ~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998875421 1 6789999999999999999999999999999 88999999999865
No 430
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.65 E-value=1.4e-15 Score=138.22 Aligned_cols=104 Identities=26% Similarity=0.564 Sum_probs=96.6
Q ss_pred ccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEEEEEccCCCeEE
Q 002580 202 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 281 (905)
Q Consensus 202 ~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 281 (905)
|++++++|. +|+|+++|++|++++||++++++|+++..+.++.........+.+.+..+..+..++..++++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 99999999999999999999999999998888877888899999999999999999999999999999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEeccch
Q 002580 282 NLLTIAPIKDDEGKVLKFIGMQVEVSK 308 (905)
Q Consensus 282 ~~~s~~pi~d~~G~v~~~v~~~~DITe 308 (905)
++++++|+.+++|++.+++++++|||+
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=1.2e-15 Score=157.32 Aligned_cols=140 Identities=21% Similarity=0.152 Sum_probs=109.0
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCH-------------------HHHHHHHHHHHHHHhCCCC-
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-------------------NKVHRACAEREILDMLDHP- 732 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~-------------------~~~~~~~~E~~il~~l~h~- 732 (905)
.|.+.+.||+|+||.||++... +|+.+|+|++........ ........|+.++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred hhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 3788899999999999999874 799999998765321000 0112356788888888777
Q ss_pred -CcceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC
Q 002580 733 -FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 811 (905)
Q Consensus 733 -nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~ 811 (905)
.++..++ ....+++|||++|++|..+... .....++.+++.++.++|+.||+||||||+||+++.++
T Consensus 95 i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 95 FPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCC
Confidence 4555554 2456899999999998765321 23456888999999999999999999999999999999
Q ss_pred cEEEEeccCccccC
Q 002580 812 HVSLTDFDLSCLTS 825 (905)
Q Consensus 812 ~vkL~DFG~s~~~~ 825 (905)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999985543
No 432
>PF13426 PAS_9: PAS domain; PDB: 3ULF_B 3UE6_E 2Z6D_B 2Z6C_B 3P7N_B 1LL8_A 3MJQ_A 3BWL_A 4EET_B 4EEP_A ....
Probab=99.64 E-value=2e-15 Score=137.32 Aligned_cols=104 Identities=29% Similarity=0.492 Sum_probs=96.0
Q ss_pred cccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEE
Q 002580 485 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 564 (905)
Q Consensus 485 ~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~w 564 (905)
|++++++|. +|+|++||++|++++||++++++|+++..+.+++......+.+.+.+..+..+..+..+.+++|+.+|
T Consensus 1 p~~i~i~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~ 77 (104)
T PF13426_consen 1 PDGIFILDP---DGRILYVNPAFERLFGYSREELIGKSISDFFPEEDRPEFEEQIERALEEGGSWSGEVRLRRKDGETFW 77 (104)
T ss_dssp -SEEEEEET---TSBEEEE-HHHHHHHTS-HHHHTTSBGGGGCSTTSCHHHHHHHHHHHHHTSSEEEEEEEEETTSEEEE
T ss_pred CEEEEEECC---cCcEEehhHHHHHHHCcCHHHHcCCCcccccCcccchhhHHHHHHHHhcCCceeEEEEEEcCCCCEEE
Confidence 689999999 56699999999999999999999999998988888888889999999999999999999999999999
Q ss_pred EEEEEeeeecCCCCEEEEEEEeecCcc
Q 002580 565 NLFHLQPMRDQKGEVQYFIGVQLDGSE 591 (905)
Q Consensus 565 v~~~~~pi~d~~G~i~~~i~i~~DITe 591 (905)
+.+++.|+.+++|++.+++++++||||
T Consensus 78 ~~~~~~~i~~~~g~~~~~i~~~~DiTe 104 (104)
T PF13426_consen 78 VEVSASPIRDEDGEITGIIGIFRDITE 104 (104)
T ss_dssp EEEEEEEEEETTSSEEEEEEEEEEEHH
T ss_pred EEEEEEEEECCCCCEEEEEEEEEECCC
Confidence 999999999999999999999999996
No 433
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2.4e-15 Score=178.39 Aligned_cols=140 Identities=21% Similarity=0.227 Sum_probs=112.5
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeeccccc-----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCe
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 746 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~-----~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 746 (905)
..|...+.||+|+||.||++.+... .+++|........ .......+.+|+.++..++|++++..+.++.+...
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3456788999999999999987443 3444443222111 11234568899999999999999988877777778
Q ss_pred EEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 747 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 747 ~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
.++||||++|++|.+++. ....++.+++.+|.+||+.||+||||||+|||+ .++.++|+|||+++..
T Consensus 411 ~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 899999999999998875 245688999999999999999999999999999 5789999999999764
No 434
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1.5e-16 Score=160.69 Aligned_cols=198 Identities=16% Similarity=0.250 Sum_probs=160.3
Q ss_pred cccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeE
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 747 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 747 (905)
.++.....++.+|...-.|..|++++. |..++.|+++..... ...-..|..|.-.|+-+.||||+.+++.|....++
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t-~risrdfneefp~lrifshpnilpvlgacnsppnl 262 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVT-ARISRDFNEEFPALRIFSHPNILPVLGACNSPPNL 262 (448)
T ss_pred CcchhhhhhhhhhccCCCccccccccc--Ccchhhhhhhhhhcc-hhhcchhhhhCcceeeecCCchhhhhhhccCCCCc
Confidence 355667778888999999999999994 455777887755332 22335677888889889999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeeCCCCCCCEEEcCCCcEEEE--eccCccc
Q 002580 748 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLT--DFDLSCL 823 (905)
Q Consensus 748 ~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~g--IvHrDLKp~NILl~~~~~vkL~--DFG~s~~ 823 (905)
.++..||+-|+|+.++........+..++..++.+++.|+.|||+.. |.---|....++||++.+.+|. |--++.
T Consensus 263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf- 341 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF- 341 (448)
T ss_pred eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee-
Confidence 99999999999999999887777888999999999999999999985 4445788999999998877653 333321
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC------CCCchHHHHHHHHHHHHhCCCC
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA------YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~------~~~sDiwSlGvil~elltg~~P 897 (905)
+.......|.||+||.+.. -..+|+|||+++||||.|...|
T Consensus 342 ---------------------------------qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevp 388 (448)
T KOG0195|consen 342 ---------------------------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVP 388 (448)
T ss_pred ---------------------------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccc
Confidence 1223356789999999984 2489999999999999999999
Q ss_pred chhhh
Q 002580 898 FPILC 902 (905)
Q Consensus 898 F~~~~ 902 (905)
|....
T Consensus 389 fadls 393 (448)
T KOG0195|consen 389 FADLS 393 (448)
T ss_pred cccCC
Confidence 97653
No 435
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.61 E-value=4.2e-16 Score=183.42 Aligned_cols=175 Identities=33% Similarity=0.459 Sum_probs=123.3
Q ss_pred CCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 672 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 672 ~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
.+|..++.|..|+||.||.++++.+.+.+|+|+-+.+ + +.+- ++.....|+++
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~-l--------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN-L--------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccc-h--------hhhc--cccccCCccee----------------
Confidence 5789999999999999999999999999999653322 1 1100 33333444443
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
|+....++..+. ++- +++.+++|||+.||+|||+||+|.+|..-|.+|+.|||++++........
T Consensus 136 -----gDc~tllk~~g~--lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGP--LPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -----chhhhhcccCCC--Ccc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 455555554322 332 22778999999999999999999999999999999999997754222111
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCcccccccccc--CC-CCchHHHHHHHHHHHHhCCCCchh
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--AY-TRMTRYNYLILVSKKFMEFQPFPI 900 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--~~-~~sDiwSlGvil~elltg~~PF~~ 900 (905)
....-..+ +. ........||||.|+|||++. || ...|.|++|+|+|+++-|..||-.
T Consensus 201 l~eg~I~k-----------~t-~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffG 260 (1205)
T KOG0606|consen 201 LKEGHIEK-----------DT-HEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG 260 (1205)
T ss_pred hhhcchHH-----------HH-HHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence 11100000 00 112344679999999999998 44 488999999999999999999843
No 436
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.59 E-value=8.9e-15 Score=149.16 Aligned_cols=139 Identities=20% Similarity=0.219 Sum_probs=100.2
Q ss_pred cccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHH---------------------HHHHHHHHHHhCCCC--C
Q 002580 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVH---------------------RACAEREILDMLDHP--F 733 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~---------------------~~~~E~~il~~l~h~--n 733 (905)
.+.||+|+||.||+|.+. +++.||+|++............ ....|...+..+.+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 567999999999999986 7899999998764221111111 113566666666443 3
Q ss_pred cceEEEEEEeCCeEEEEEeccCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeeCCCCCCCEEEcCCC
Q 002580 734 VPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNG 811 (905)
Q Consensus 734 Iv~l~~~~~~~~~~~lV~E~~~gg~L~~-~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~-~gIvHrDLKp~NILl~~~~ 811 (905)
+++++++ ...++||||++++++.. .+.... . ...+..++.+++.++.++|. .||+|+||||+||+++ ++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh---h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CC
Confidence 5555553 24689999998854321 121110 1 15678899999999999999 9999999999999999 89
Q ss_pred cEEEEeccCccccC
Q 002580 812 HVSLTDFDLSCLTS 825 (905)
Q Consensus 812 ~vkL~DFG~s~~~~ 825 (905)
.++|+|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999996543
No 437
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.57 E-value=8.9e-16 Score=180.59 Aligned_cols=203 Identities=21% Similarity=0.232 Sum_probs=150.9
Q ss_pred CeeecccccccCceEEEEEEEcCCCeEEEEEEeeccc-ccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEE
Q 002580 673 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 751 (905)
Q Consensus 673 ~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~-~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 751 (905)
+|...+.||.+.|=+|.+|++. .|. +++|++-+.. ...-....+...|++ ...+++||++.+.-+...+...|||-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR 100 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR 100 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence 6888899999999999999984 344 8999987653 122233344445555 56679999999988877788889999
Q ss_pred eccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCC
Q 002580 752 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 831 (905)
Q Consensus 752 E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~ 831 (905)
+|. -.+|++.+..++. +...+.+.|+.||+.||..||..||+|||||.+||||++-+=+.|+||..-+...
T Consensus 101 qyv-khnLyDRlSTRPF--L~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY------ 171 (1431)
T KOG1240|consen 101 QYV-KHNLYDRLSTRPF--LVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTY------ 171 (1431)
T ss_pred HHH-hhhhhhhhccchH--HHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCcc------
Confidence 998 5699999876543 7778888899999999999999999999999999999998889999998653322
Q ss_pred CCcchhhhccccCCCCcccccccccccccccCCccccccccccC--------------CCCchHHHHHHHHHHHHh-CCC
Q 002580 832 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------------YTRMTRYNYLILVSKKFM-EFQ 896 (905)
Q Consensus 832 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------------~~~sDiwSlGvil~ellt-g~~ 896 (905)
.|.++.... .|+.+. ...-.-|+|||-+.. .++.||||+||++.||++ |++
T Consensus 172 LPeDNPadf--------~fFFDT------SrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~P 237 (1431)
T KOG1240|consen 172 LPEDNPADF--------TFFFDT------SRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRP 237 (1431)
T ss_pred CCCCCcccc--------eEEEec------CCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCC
Confidence 111111100 111111 111235999998862 248899999999999996 588
Q ss_pred Cchhh
Q 002580 897 PFPIL 901 (905)
Q Consensus 897 PF~~~ 901 (905)
||...
T Consensus 238 lF~LS 242 (1431)
T KOG1240|consen 238 LFTLS 242 (1431)
T ss_pred cccHH
Confidence 89753
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.56 E-value=3.7e-14 Score=150.24 Aligned_cols=137 Identities=23% Similarity=0.344 Sum_probs=104.1
Q ss_pred ccc-ccCceEEEEEEEcCCCeEEEEEEeecccc----------cCHHHHHHHHHHHHHHHhCCCCCc--ceEEEEEEeC-
Q 002580 679 PLG-SGDTGSVHLVELCGSGQYFAMKAMDKGVM----------LNRNKVHRACAEREILDMLDHPFV--PALYASFQTK- 744 (905)
Q Consensus 679 ~Lg-~G~~g~V~~~~~~~t~~~vavK~~~~~~~----------~~~~~~~~~~~E~~il~~l~h~nI--v~l~~~~~~~- 744 (905)
.|| .|+.|+||.+.. .+..++||.+..... ........+.+|+.++..+.|++| +..+++....
T Consensus 38 ~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 38 VVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred eeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 455 677778888776 377899998864321 111234567889999999988775 6777764432
Q ss_pred C---eEEEEEeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccC
Q 002580 745 T---HVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 820 (905)
Q Consensus 745 ~---~~~lV~E~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~ 820 (905)
. ..++|||+++| .+|.+++... .+++.. +.+|+.+|.+||++||+||||||.|||++.++.++|+|||.
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 2 23599999997 6898888652 355443 56899999999999999999999999999989999999999
Q ss_pred cccc
Q 002580 821 SCLT 824 (905)
Q Consensus 821 s~~~ 824 (905)
+...
T Consensus 189 ~~~~ 192 (239)
T PRK01723 189 GELR 192 (239)
T ss_pred cccC
Confidence 8664
No 439
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.52 E-value=8.7e-14 Score=127.91 Aligned_cols=110 Identities=24% Similarity=0.365 Sum_probs=99.9
Q ss_pred HHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEEEEEccCC
Q 002580 198 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDG 277 (905)
Q Consensus 198 le~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG 277 (905)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..+.++.........+.+++..+.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999 9999999999999999999999999999888887777888889999998888777666655 99
Q ss_pred CeEEEEEEeeeeecCCCCEEEEEEEEeccchhhH
Q 002580 278 TPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 311 (905)
Q Consensus 278 ~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~ 311 (905)
...|+.+++.|++|.+|++.|++++++|||++|+
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999885
No 440
>PF08448 PAS_4: PAS fold; InterPro: IPR013656 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. ; PDB: 3K3D_A 3K3C_B 3KX0_X 3FC7_B 3LUQ_D 3MXQ_A 3BWL_C 3FG8_A.
Probab=99.52 E-value=5.6e-14 Score=129.17 Aligned_cols=110 Identities=26% Similarity=0.364 Sum_probs=99.4
Q ss_pred HHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCC
Q 002580 481 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSG 560 (905)
Q Consensus 481 ~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG 560 (905)
|++++++++++|. +|+|+++|+++++++|++.++++|+++..++++.........+.+++.++.....+..... +|
T Consensus 1 l~~~p~~i~v~D~---~~~i~~~N~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 76 (110)
T PF08448_consen 1 LDSSPDGIFVIDP---DGRIVYANQAAAELFGVSPEELIGRSLFDLLPPEDREEFQAALRRALAGGEPVFFEEILLR-DG 76 (110)
T ss_dssp HHHCSSEEEEEET---TSBEEEE-HHHHHHHTSTHHHHTTSBHHHHSCCGCHHHHHHHHHHHHHHTSEEEEEEEECT-TS
T ss_pred CCCCCceeEEECC---CCEEEEEHHHHHHHhCCCHHHHhhccchhccccchhhhhHHHHHHhhccCceEEEEEEEee-cC
Confidence 6899999999999 6669999999999999999999999988888888888888888889888888777766655 99
Q ss_pred cEEEEEEEEeeeecCCCCEEEEEEEeecCccccc
Q 002580 561 KKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 594 (905)
Q Consensus 561 ~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~ 594 (905)
..+|+.+++.|++|.+|++.|++++++|||++||
T Consensus 77 ~~~~~~~~~~Pi~~~~g~~~g~~~~~~DiT~~rr 110 (110)
T PF08448_consen 77 EERWFEVSISPIFDEDGEVVGVLVIIRDITERRR 110 (110)
T ss_dssp CEEEEEEEEEEEECTTTCEEEEEEEEEEECCHHH
T ss_pred CcEEEEEEEEEeEcCCCCEEEEEEEEEECchhhC
Confidence 9999999999999999999999999999999985
No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.50 E-value=1.3e-13 Score=134.15 Aligned_cols=132 Identities=23% Similarity=0.245 Sum_probs=110.7
Q ss_pred ecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeCCeEEEEEec
Q 002580 676 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDY 753 (905)
Q Consensus 676 i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~~~lV~E~ 753 (905)
+++.||.|.++.||++.... ..+++|....... ...+..|+.++..+.| .++++++.++...+..+++|||
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~ 74 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEW 74 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEe
Confidence 45679999999999999843 6799998865421 4567889999999976 5899999988888899999999
Q ss_pred cCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 754 CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 754 ~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~---gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
++|..+..+ +......++.+++.+|.+||.. +++|+||+|+||+++..+.++++|||.+..
T Consensus 75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 988777543 4455667789999999999985 699999999999999989999999999864
No 442
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.49 E-value=1.9e-13 Score=126.36 Aligned_cols=112 Identities=21% Similarity=0.385 Sum_probs=96.2
Q ss_pred HHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEE-EE
Q 002580 192 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-RL 270 (905)
Q Consensus 192 ~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~-e~ 270 (905)
+.+++++++++++++++|. +|+|+++|++|++++||+.++++|+++..+.++++.......+.+.+..+..... ..
T Consensus 1 e~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (113)
T PF00989_consen 1 ERYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEV 77 (113)
T ss_dssp HHHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEE
T ss_pred CHHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEE
Confidence 4688999999999999998 9999999999999999999999999998777766655677888888888776554 33
Q ss_pred EEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEecc
Q 002580 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEV 306 (905)
Q Consensus 271 ~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DI 306 (905)
....++|..+|+.++.+|+++.+|++.+++++++||
T Consensus 78 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 78 RFRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 333469999999999999999999999999999997
No 443
>PF00989 PAS: PAS fold; InterPro: IPR013767 PAS domains are involved in many signalling proteins where they are used as a signal sensor domain []. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Haeme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. The PAS domain was named after three proteins that it occurs in: Per- period circadian protein Arnt- Ah receptor nuclear translocator protein Sim- single-minded protein. PAS domains are often associated with PAC domains IPR001610 from INTERPRO. It appears that these domains are directly linked, and that together they form the conserved 3D PAS fold. The division between the PAS and PAC domains is caused by major differences in sequences in the region connecting these two motifs []. In human PAS kinase, this region has been shown to be very flexible, and adopts different conformations depending on the bound ligand []. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels [].; GO: 0006355 regulation of transcription, DNA-dependent; PDB: 2GJ3_A 4F3L_B 1XFN_A 1OTD_A 2PYR_A 1KOU_A 1XFQ_A 2ZOI_A 2ZOH_A 1OTA_A ....
Probab=99.48 E-value=1.5e-13 Score=127.03 Aligned_cols=111 Identities=23% Similarity=0.357 Sum_probs=95.0
Q ss_pred cHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEE-EEE
Q 002580 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTV-QLI 554 (905)
Q Consensus 476 ~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~-e~~ 554 (905)
+|+.++++++++++++|. +|+|+|+|++++++|||+.++++|++...++++++.......+...+..+..... +..
T Consensus 2 ~~~~i~~~~~~~i~~~d~---~g~I~~~N~a~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (113)
T PF00989_consen 2 RYRAILENSPDGIFVIDE---DGRILYVNQAAEELLGYSREELIGKSLFDLIHPEDRRELRERLRQALSQGESGESFEVR 78 (113)
T ss_dssp HHHHHHHCSSSEEEEEET---TSBEEEECHHHHHHHSS-HHHHTTSBGGGGCSGGGHHHHHHHHHHHHHHCCHECEEEEE
T ss_pred HHHHHHhcCCceEEEEeC---cCeEEEECHHHHHHHccCHHHHcCCcHHHhcCchhhHHHHHHHHHHHHcCCCceeEEEE
Confidence 489999999999999998 5669999999999999999999999998888887766677778888877776444 444
Q ss_pred EEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecC
Q 002580 555 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDG 589 (905)
Q Consensus 555 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DI 589 (905)
...++|+.+|+.+..+|+++.+|.+.+++++++||
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~DI 113 (113)
T PF00989_consen 79 FRLRDGRPRWVEVRASPVRDEDGQIIGILVIFRDI 113 (113)
T ss_dssp EEETTSCEEEEEEEEEEEEETTEEEEEEEEEEEE-
T ss_pred EEecCCcEEEEEEEEEEEEeCCCCEEEEEEEEEeC
Confidence 44569999999999999999999999999999997
No 444
>PRK13557 histidine kinase; Provisional
Probab=99.44 E-value=5.3e-13 Score=159.00 Aligned_cols=148 Identities=39% Similarity=0.698 Sum_probs=123.8
Q ss_pred ccHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEE
Q 002580 475 IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 554 (905)
Q Consensus 475 ~~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~ 554 (905)
..|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..+++
T Consensus 30 ~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (540)
T PRK13557 30 DIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIATEIL 109 (540)
T ss_pred HHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceEEEE
Confidence 34899999999999999976667889999999999999999999999988888888888888888888888888888999
Q ss_pred EEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccccCCchhhhHHHHHHHHHHhhhhhhh
Q 002580 555 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 622 (905)
Q Consensus 555 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~~~~~~~~e~~~l~~~~~~~~~~~ 622 (905)
..++||+.+|+.++..|+++.+|.+++++++.+|||++++.+++.........+..++..+++.+...
T Consensus 110 ~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~~~~~~~l~~~~~~i~h~l~~p 177 (540)
T PRK13557 110 NYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQAQKMEALGQLTGGIAHDFNNL 177 (540)
T ss_pred EEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHHHHHHHHhhhhhhhhhHHhhhH
Confidence 89999999999999999999999999999999999999987655443333333444444444444433
No 445
>PRK13559 hypothetical protein; Provisional
Probab=99.43 E-value=2.2e-12 Score=145.80 Aligned_cols=120 Identities=45% Similarity=0.839 Sum_probs=108.7
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 556 (905)
|+.++++++++|+++|..+.+|.|+++|++|++++||+.+|++|+++..+.++.........+...+..+..+..+....
T Consensus 45 ~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 124 (361)
T PRK13559 45 FEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVELLNY 124 (361)
T ss_pred HHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEEEEEE
Confidence 78899999999999998665677999999999999999999999998777777777777777788888888888899999
Q ss_pred ecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCccccccc
Q 002580 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 596 (905)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e 596 (905)
++||..+|+.++..|+++.+|.+.+++++++|||++|+.+
T Consensus 125 ~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e 164 (361)
T PRK13559 125 RKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVR 164 (361)
T ss_pred cCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhH
Confidence 9999999999999999999999999999999999999854
No 446
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.41 E-value=1.8e-14 Score=170.66 Aligned_cols=208 Identities=21% Similarity=0.279 Sum_probs=165.0
Q ss_pred CCCeeecccccccCceEEEEEEEcCC-CeEEEEEEeecccccCHHHHHHHHHHHHHHHhCC-CCCcceEEEEEEeCCeEE
Q 002580 671 LQHFRPIKPLGSGDTGSVHLVELCGS-GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 748 (905)
Q Consensus 671 ~~~y~i~~~Lg~G~~g~V~~~~~~~t-~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~ 748 (905)
...|.+.+.||+|+|+.|-.+....+ ...+|.|.+.... ...........|..+-+.+. |.|++.+++........+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~ 97 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL 97 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCcccc
Confidence 34688888999999999998887433 4556667665442 23334455556777777775 999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeeCCCCCCCEEEcCCC-cEEEEeccCccccCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSC 826 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH-~~gIvHrDLKp~NILl~~~~-~vkL~DFG~s~~~~~ 826 (905)
++++|..|++++..+........+...+..++.|+..++.|+| ..++.|+||||+|.+++..+ .+++.|||+|.....
T Consensus 98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999998883222224677788889999999999999 99999999999999999999 999999999976542
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccC-CccccccccccC----CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVG-TEEYIAPVSDFA----YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-T~~Y~APE~l~~----~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
.. .........+| ++.|+|||...+ ....|+||+|+++.-+++|..|+...
T Consensus 178 ~~------------------------g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~ 233 (601)
T KOG0590|consen 178 KN------------------------GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFP 233 (601)
T ss_pred cC------------------------CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccc
Confidence 10 11122334577 999999999997 67999999999999999999999766
Q ss_pred hc
Q 002580 902 CR 903 (905)
Q Consensus 902 ~r 903 (905)
.+
T Consensus 234 ~~ 235 (601)
T KOG0590|consen 234 SR 235 (601)
T ss_pred cc
Confidence 54
No 447
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.40 E-value=1.4e-12 Score=162.73 Aligned_cols=158 Identities=13% Similarity=0.124 Sum_probs=129.0
Q ss_pred CCchhhHHHHHhhhhc-ccHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHH
Q 002580 459 PDSVDDKVRQKEMRKG-IDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVR 537 (905)
Q Consensus 459 ~di~e~k~~e~~~~~~-~~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~ 537 (905)
.++.++++.+++++.+ ..++.++++++++|+++|. +|+|+++|+++++++||+.++++|++...+++++.......
T Consensus 138 ~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~~ 214 (779)
T PRK11091 138 NEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVIE 214 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHHH
Confidence 4677777777766655 5689999999999999999 56699999999999999999999999888888776666666
Q ss_pred HHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccccCCchhhhHHHHHHHHHHhh
Q 002580 538 KIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAE 617 (905)
Q Consensus 538 ~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~~~~~~~~e~~~l~~~~~~ 617 (905)
.....+..+..+..+....++||+.+|+.++..|+++.+|.+.|++++++|||++|++++++. ...++....+..++|
T Consensus 215 ~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~--~a~~~~~~~~a~isH 292 (779)
T PRK11091 215 TDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALE--KASRDKTTFISTISH 292 (779)
T ss_pred HHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHH--HHHHHHHHHHHHhhH
Confidence 677777888889999999999999999999999999999999999999999999999654432 222333444455555
Q ss_pred hhhh
Q 002580 618 NVNE 621 (905)
Q Consensus 618 ~~~~ 621 (905)
.+..
T Consensus 293 elrt 296 (779)
T PRK11091 293 ELRT 296 (779)
T ss_pred hhcC
Confidence 5443
No 448
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.40 E-value=6.2e-14 Score=155.58 Aligned_cols=125 Identities=20% Similarity=0.318 Sum_probs=103.7
Q ss_pred CeEEEEEeccCCCCHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 745 THVCLITDYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
.++||.|++|...+|.+++.+. .....+......++.|++.|++| +|.+|+|+||.||++..+..+||.|||+...
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence 4689999999999999999743 33456777888999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHh
Q 002580 824 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFM 893 (905)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~ellt 893 (905)
....+.. .......+..+||..||+||.+.+ ..++||||||++|+||++
T Consensus 406 ~~~~~~~---------------------~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 406 QDKDETV---------------------APAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred cccCCcc---------------------cchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 4432211 112334456789999999999995 459999999999999998
No 449
>PRK13557 histidine kinase; Provisional
Probab=99.39 E-value=3.8e-12 Score=151.63 Aligned_cols=130 Identities=38% Similarity=0.762 Sum_probs=118.6
Q ss_pred chHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEE
Q 002580 189 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 268 (905)
Q Consensus 189 ~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 268 (905)
..+..|..++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........++..+..+..+..
T Consensus 27 ~~~~~~~~~~~~~~~~i~v~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (540)
T PRK13557 27 HRSDIFFAAVETTRMPMIVTDPNQPDNPIVFANRAFLEMTGYAAEEIIGNNCRFLQGPETDRATVAEVRDAIAERREIAT 106 (540)
T ss_pred hhhHHHHHHHHhCcCcEEEEcCCCCCCCEEEEcHHHHHHhCCCHHHhcCCChHhhcCCCCCHHHHHHHHHHHHcCCCceE
Confidence 44678999999999999999976668999999999999999999999999998888777777788889999999988888
Q ss_pred EEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 002580 269 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 318 (905)
Q Consensus 269 e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~ 318 (905)
++..++++|+.+|+.+++.|+++.+|.+.+++++.+|||++++++++++.
T Consensus 107 ~~~~~~~~G~~~~~~~~~~~i~~~~g~~~~~~~~~~dit~~~~~e~~l~~ 156 (540)
T PRK13557 107 EILNYRKDGSSFWNALFVSPVYNDAGDLVYFFGSQLDVSRRRDAEDALRQ 156 (540)
T ss_pred EEEEEeCCCCEEEEEEEEEEeECCCCCEEEEEEEecChHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999877653
No 450
>PRK13559 hypothetical protein; Provisional
Probab=99.38 E-value=4.8e-12 Score=143.10 Aligned_cols=127 Identities=40% Similarity=0.763 Sum_probs=112.6
Q ss_pred hHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEE
Q 002580 190 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 269 (905)
Q Consensus 190 ~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 269 (905)
+...++.+++.++++++++|..+.+|+|+++|++|++++||+.+|++|+++..+.++.........++..+..+..+..+
T Consensus 41 ~~~~~~~~~e~~~~~i~i~D~~~~~g~i~~~N~a~~~l~G~~~~e~iG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e 120 (361)
T PRK13559 41 SGRLFEQAMEQTRMAMCITDPHQPDLPIVLANQAFLDLTGYAAEEVVGRNCRFLQGAATDPIAVAKIRAAIAAEREIVVE 120 (361)
T ss_pred hhhHHHHHHHhCCCcEEEecCCCCCCcEEEEchHHHHHhCCCHHHHcCCChhhhcCCCCCHHHHHHHHHHhccCCceEEE
Confidence 35567889999999999999755578999999999999999999999999887776666666777788888888888889
Q ss_pred EEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHh
Q 002580 270 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDK 316 (905)
Q Consensus 270 ~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l 316 (905)
...+++||..+|+.+++.|+++.+|.+.+++++++|||++|++|+..
T Consensus 121 ~~~~~~dG~~~~~~~~~~~i~d~~G~~~~~v~~~~DITerk~~e~~~ 167 (361)
T PRK13559 121 LLNYRKDGEPFWNALHLGPVYGEDGRLLYFFGSQWDVTDIRAVRALE 167 (361)
T ss_pred EEEEcCCCCEEEEEEEEEEEEcCCCCEEEeeeeeeehhcchhhHHHH
Confidence 99999999999999999999999999999999999999999887554
No 451
>PRK11091 aerobic respiration control sensor protein ArcB; Provisional
Probab=99.37 E-value=1.3e-12 Score=162.81 Aligned_cols=143 Identities=13% Similarity=0.118 Sum_probs=127.6
Q ss_pred EeeeecCCcccccccchHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHH
Q 002580 174 SGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDV 253 (905)
Q Consensus 174 ~~~i~~~~~~~~~l~~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~ 253 (905)
..++.+++..+.++...++.++.++++++++++++|. +|+|+++|++|++++||+.++++|+++..+++++......
T Consensus 137 ~~~i~~r~~~~~~l~~~~~~l~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~G~~~~eliG~~~~~l~~~~~~~~~~ 213 (779)
T PRK11091 137 KNEIKEREETQIELEQQSSLLRSFLDASPDLVYYRNE---DGEFSGCNRAMELLTGKSEKQLIGLTPKDVYSPEAAEKVI 213 (779)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcceEEEECC---CCcEEeEcHHHHHHhCcCHHHHcCCChHHhCCHHHHHHHH
Confidence 3456667777888899999999999999999999999 9999999999999999999999999988777776666666
Q ss_pred HHHHHHHHcCCcEEEEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcC
Q 002580 254 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLR 319 (905)
Q Consensus 254 ~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~ 319 (905)
......+..+..+..+....++||..+|+.++..|+++.+|.+.|++++++|||++|++|++++..
T Consensus 214 ~~~~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~pi~~~~g~~~g~v~~~~DITe~k~~e~~l~~a 279 (779)
T PRK11091 214 ETDEKVFRHNVSLTYEQWLDYPDGRKACFELRKVPFYDRVGKRHGLMGFGRDITERKRYQDALEKA 279 (779)
T ss_pred HHHHHHHhcCCCeEEEEEEEcCCCCEEEEEEEeeeEEcCCCCEEEEEEEEeehhHHHHHHHHHHHH
Confidence 667777888888888888899999999999999999999999999999999999999999887653
No 452
>PRK09776 putative diguanylate cyclase; Provisional
Probab=99.36 E-value=7.8e-12 Score=161.98 Aligned_cols=190 Identities=12% Similarity=0.116 Sum_probs=146.7
Q ss_pred cccccCCCCCccceeeccCCCCCCCCCCccccCCCC-cceeEEeeeecCCcccccccchHHHHHHHHHhhccceEEEeCC
Q 002580 133 VLKTDTETGKPQAVVARTSGGDDPNGKPGTSRRNSN-NSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDAT 211 (905)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~l~~~~~~l~~ile~~~~~i~i~D~~ 211 (905)
.++....+| .+|+.....-..+. .+.. .+.++..||++++..++++.+.++.++.++++++++++++|.
T Consensus 485 e~r~~~~dG-~~w~~~~~~~~~d~--------~G~~~~~ig~~~DITerk~~e~~L~~~~~~l~~~l~~~~~~i~~~D~- 554 (1092)
T PRK09776 485 EFRIVVKDG-VRHIRALANRVLNK--------DGEVERLLGINMDMTEVRQLNEALFQEKERLHITLDSIGEAVVCTDM- 554 (1092)
T ss_pred EEEEEcCCc-eEEEEEeeEEEECC--------CCCEEEEEeeeeehhHHHHHHHHHHHHHHHHHHHHhccccEEEEECC-
Confidence 344555677 77775443321211 1222 467888999999999999999999999999999999999999
Q ss_pred CCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCC--CCChHHHHHHHHHHHcCCc--EEEEEEEEccCCCeEEEEEEee
Q 002580 212 KPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA--GTDPEDVAKIRETLQNGQS--YCGRLLNYKKDGTPFWNLLTIA 287 (905)
Q Consensus 212 ~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~--~~~~~~~~~i~~~l~~g~~--~~~e~~~~~kdG~~~w~~~s~~ 287 (905)
+|+|+++|+++++++||+.+|++|+++..+.+. .........+......+.. ...+...+++||..+|++.+..
T Consensus 555 --~g~i~~~N~a~~~l~G~~~~e~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 632 (1092)
T PRK09776 555 --AMKVTFMNPVAEKMTGWTQEEALGVPLLTVLHITFGDNGPLMENIYSCLTSRSAAYLEQDVVLHCRSGGSYDVHYSIT 632 (1092)
T ss_pred --CCeEEEEcHHHHHHhCCCHHHHcCCCHHHHcccccCCcchhhHHHHHHHhcCCCccccceEEEEeCCCcEEEEEEEee
Confidence 999999999999999999999999997644332 2222333335555554443 4566777899999999999999
Q ss_pred eeecCCCCEEEEEEEEeccchhhHHHHHhhc-----CCCCChhHHHHHHHHH
Q 002580 288 PIKDDEGKVLKFIGMQVEVSKHTEGAKDKML-----RPNGLPESLIRYDARQ 334 (905)
Q Consensus 288 pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~-----~~~~l~~~l~~~~~~~ 334 (905)
|+++.+|++.+++++.+|||++|+.|++|+. ..++|++|....+...
T Consensus 633 pi~~~~g~~~g~v~~~~DITe~k~~e~~L~~~a~~D~lTgl~nr~~f~~~l~ 684 (1092)
T PRK09776 633 PLSTLDGENIGSVLVIQDVTESRKMLRQLSYSASHDALTHLANRASFEKQLR 684 (1092)
T ss_pred eeecCCCCEEEEEEEEEecchHHHHHHHHHhhcCCCcccCCccHHHHHHHHH
Confidence 9999999999999999999999999998864 4678888765555443
No 453
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.36 E-value=1.1e-12 Score=148.63 Aligned_cols=152 Identities=22% Similarity=0.282 Sum_probs=124.6
Q ss_pred HHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-eeCCCCCCC
Q 002580 726 LDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-IYRDLKPEN 804 (905)
Q Consensus 726 l~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gI-vHrDLKp~N 804 (905)
|+.+.|.|+.++++.+.++...++|.+||.-|+|.+.+... ...++..-...++++|+.||.|||...| .|+.|++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 35678999999999999999999999999999999999874 3447777888899999999999999866 999999999
Q ss_pred EEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC---------
Q 002580 805 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--------- 875 (905)
Q Consensus 805 ILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--------- 875 (905)
.+++....+||+|||+.......... .......-..-|.|||.+.+
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~-------------------------~~~~~~~~~~lw~aPellr~~~~~~~~~~ 134 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEP-------------------------EAHHPIRKALLWTAPELLRGALSQSLESA 134 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccc-------------------------cccchhHHHHhccCHHHhccccccccccc
Confidence 99999999999999998664320000 00011123457999999984
Q ss_pred -CCCchHHHHHHHHHHHHhCCCCchhhhc
Q 002580 876 -YTRMTRYNYLILVSKKFMEFQPFPILCR 903 (905)
Q Consensus 876 -~~~sDiwSlGvil~elltg~~PF~~~~r 903 (905)
..+.|+||||++++|+++...||.....
T Consensus 135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~ 163 (484)
T KOG1023|consen 135 LTQKGDIYSFGIIMYEILFRSGPFDLRNL 163 (484)
T ss_pred ccccCCeehHHHHHHHHHhccCccccccc
Confidence 3479999999999999999999987544
No 454
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.36 E-value=2.5e-12 Score=147.94 Aligned_cols=188 Identities=21% Similarity=0.245 Sum_probs=115.5
Q ss_pred CCCchhhhcccccccCCCCCCCCCCchhhHHhhcCccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeeccc
Q 002580 630 NLTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV 709 (905)
Q Consensus 630 n~~p~~~~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~ 709 (905)
.+-|+++...-++.....|+.+.......+...+..+..-....|. .+.||.|++|+||+|+. .+|+.||||+.++..
T Consensus 76 dllp~~~~~~L~~Lqd~v~p~~~~~~~~~l~~elg~~~~~~F~~fd-~~plasaSigQVh~A~l-~~G~~VaVKv~rp~i 153 (437)
T TIGR01982 76 DLLPADIAEELSLLQDRVPPFDFKVARKVIEAALGGPLEELFAEFE-EKPLAAASIAQVHRARL-VDGKEVAVKVLRPGI 153 (437)
T ss_pred ccCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCcCHHHHHhhCC-CcceeeeehhheEEEEe-cCCCEEEEEeeCCCc
Confidence 3445666555555444444333222222333333222211122333 36799999999999997 478999999987652
Q ss_pred ccCHH---------------------------H----HH------HHHHHHHHHHhC----C-CCC--cceEEEEEEeCC
Q 002580 710 MLNRN---------------------------K----VH------RACAEREILDML----D-HPF--VPALYASFQTKT 745 (905)
Q Consensus 710 ~~~~~---------------------------~----~~------~~~~E~~il~~l----~-h~n--Iv~l~~~~~~~~ 745 (905)
...-. . .. .+.+|...+.++ . +++ |+++|.. ...
T Consensus 154 ~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~--~~~ 231 (437)
T TIGR01982 154 EKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREAANASELGENFKNDPGVYVPEVYWD--RTS 231 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCCCCCEEeCCEehh--hcC
Confidence 11000 0 00 233455555544 2 333 3344432 234
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH-HHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV-ALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~-gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
..+|||||++|++|.++...... ... ...++.+++. .+..+|..|++|+|+||.||+++.+|.++|+|||++...
T Consensus 232 ~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 232 ERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred CceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 57999999999999887653211 122 2345555555 478899999999999999999999999999999999765
Q ss_pred C
Q 002580 825 S 825 (905)
Q Consensus 825 ~ 825 (905)
.
T Consensus 308 ~ 308 (437)
T TIGR01982 308 S 308 (437)
T ss_pred C
Confidence 4
No 455
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.35 E-value=4e-13 Score=156.10 Aligned_cols=187 Identities=17% Similarity=0.212 Sum_probs=111.8
Q ss_pred CCchhhhcccccccCCCCCCCCCCchhhHHhhcCccccccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccc
Q 002580 631 LTPEDLWANHSKVVHPKPHRKDSPPWKAIQKILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM 710 (905)
Q Consensus 631 ~~p~~~~~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~ 710 (905)
+-|+++...-++.....|+.+.......+...+..+..-....|.. +.||+|++|+||.|+...+|+.||||++.+...
T Consensus 79 llP~~~~~eL~~Lqd~vpp~~~~~~~~~ie~elG~~~~~~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~ 157 (537)
T PRK04750 79 LFPPDIADELALLQDRVPPFDGALARAIIEKALGGPVEEWFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDIL 157 (537)
T ss_pred cCCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCCCHHHHHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchH
Confidence 3455655544444443333222222223333333322222456776 789999999999999988899999999986521
Q ss_pred c--------------------------C-H----HHHHH------HHHHHHHHHhC----CCCCcceEEEEEE-eCCeEE
Q 002580 711 L--------------------------N-R----NKVHR------ACAEREILDML----DHPFVPALYASFQ-TKTHVC 748 (905)
Q Consensus 711 ~--------------------------~-~----~~~~~------~~~E~~il~~l----~h~nIv~l~~~~~-~~~~~~ 748 (905)
. + . +.... +.+|...+.++ .+.+.+.+-.+|. .....+
T Consensus 158 ~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~V 237 (537)
T PRK04750 158 PVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETV 237 (537)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCce
Confidence 0 0 0 11111 23444444443 2333333333332 234678
Q ss_pred EEEeccCCCCHHHHH--hhCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC----cEEEEeccC
Q 002580 749 LITDYCPGGELFLLL--DRQPT--KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDL 820 (905)
Q Consensus 749 lV~E~~~gg~L~~~l--~~~~~--~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~----~vkL~DFG~ 820 (905)
|||||++|+.+.++. ...+. ..+.+..+..++.| ++..|++|+|+||.||+++.+| .++++|||+
T Consensus 238 LvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Q-------if~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGi 310 (537)
T PRK04750 238 MVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQ-------VFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGI 310 (537)
T ss_pred EEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHH-------HHhCCeeeCCCChHHeEEecCCCCCCeEEEEecce
Confidence 999999999997753 22210 01333333334444 4468999999999999999888 999999999
Q ss_pred ccccC
Q 002580 821 SCLTS 825 (905)
Q Consensus 821 s~~~~ 825 (905)
+..++
T Consensus 311 vg~l~ 315 (537)
T PRK04750 311 VGSLN 315 (537)
T ss_pred EEECC
Confidence 87654
No 456
>PRK10060 RNase II stability modulator; Provisional
Probab=99.30 E-value=2.3e-11 Score=148.11 Aligned_cols=154 Identities=14% Similarity=0.174 Sum_probs=121.5
Q ss_pred ecCCcccccccchHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcc-cCCCCCChHHHHHH
Q 002580 178 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKI 256 (905)
Q Consensus 178 ~~~~~~~~~l~~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~i 256 (905)
.|.......+......++.+++.++++|+++|. +|+|+++|++|++++||+.+|++|+++.. +.++.........+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 173 (663)
T PRK10060 97 HDTPSVARDLSHGLSFAEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNI 173 (663)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHH
Confidence 333334444555566788899999999999999 99999999999999999999999999764 44555455566778
Q ss_pred HHHHHcCCcEEEEEEEEccCCCeEEEEEEeeeeecCCCC-EEEEEEEEeccchhhHHHHHhhc-----CCCCChhHHHHH
Q 002580 257 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGK-VLKFIGMQVEVSKHTEGAKDKML-----RPNGLPESLIRY 330 (905)
Q Consensus 257 ~~~l~~g~~~~~e~~~~~kdG~~~w~~~s~~pi~d~~G~-v~~~v~~~~DITe~k~~E~~l~~-----~~~~l~~~l~~~ 330 (905)
+..+..+..|.++++.++++|..+|...... +.+..|. ..+++++.+|||++++++++++. .+++|+||....
T Consensus 174 ~~~~~~~~~~~~e~~~~~~~G~~~~~~~~~~-~~~~~g~~~~~~i~~~~DITe~k~~e~~l~~~a~~D~LTGL~NR~~f~ 252 (663)
T PRK10060 174 RGFFRSGNAYEVERWIKTRKGQRLFLFRNKF-VHSGSGKNEIFLICSGTDITEERRAQERLRILANTDSITGLPNRNAIQ 252 (663)
T ss_pred HHHHhcCCceEEEEEEEeCCCCEEEEEeeeE-EEcCCCCceEEEEEEEEechHHHHHHHHHHHHhhcCccCCCcCHHHHH
Confidence 8888889999999999999999999876544 4444554 46788999999999999988765 578888887666
Q ss_pred HHHHH
Q 002580 331 DARQK 335 (905)
Q Consensus 331 ~~~~~ 335 (905)
+....
T Consensus 253 ~~l~~ 257 (663)
T PRK10060 253 ELIDH 257 (663)
T ss_pred HHHHH
Confidence 65544
No 457
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.28 E-value=4.6e-11 Score=146.36 Aligned_cols=128 Identities=39% Similarity=0.742 Sum_probs=115.1
Q ss_pred HHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEEE
Q 002580 192 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLL 271 (905)
Q Consensus 192 ~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~ 271 (905)
..++.+++.++.++++.|..+++|+|+|+|++|++++||+.++++|+++..+.++.........++..+..+..+..++.
T Consensus 148 r~~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 227 (665)
T PRK13558 148 RLKERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELR 227 (665)
T ss_pred HHHHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEE
Confidence 34577999999999999865568999999999999999999999999988777777666777778888888888999999
Q ss_pred EEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcC
Q 002580 272 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLR 319 (905)
Q Consensus 272 ~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~ 319 (905)
.+++||..+|+.++..|+++.+|.+.+++++.+|||++|++|++++..
T Consensus 228 ~~~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L~~~ 275 (665)
T PRK13558 228 NYRKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELALQRE 275 (665)
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988753
No 458
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.25 E-value=9.5e-11 Score=119.03 Aligned_cols=139 Identities=15% Similarity=0.118 Sum_probs=101.9
Q ss_pred cccccccCceEEEEEEEcC------CCeEEEEEEeecccc--c-----------------CHHHHHHH----HHHHHHHH
Q 002580 677 IKPLGSGDTGSVHLVELCG------SGQYFAMKAMDKGVM--L-----------------NRNKVHRA----CAEREILD 727 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~~------t~~~vavK~~~~~~~--~-----------------~~~~~~~~----~~E~~il~ 727 (905)
...||.|.-+.||.|.... .+..+|+|+++.... . ..+....+ .+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999998643 357899999864320 0 01112233 38999999
Q ss_pred hCC--CCCcceEEEEEEeCCeEEEEEeccCCCCHHH-HHhhCCCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeeCCCCCC
Q 002580 728 MLD--HPFVPALYASFQTKTHVCLITDYCPGGELFL-LLDRQPTKVLKEDAVRFYAAEVVVALEYL-HCQGIIYRDLKPE 803 (905)
Q Consensus 728 ~l~--h~nIv~l~~~~~~~~~~~lV~E~~~gg~L~~-~l~~~~~~~l~~~~~~~i~~qil~gL~~L-H~~gIvHrDLKp~ 803 (905)
++. .-+++.++++ ...+|||||+.+..+.. .++. ..++......++.+++.+|..| |..||||+||++.
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 985 3577888865 45789999996644422 2222 2355566777889999999998 8999999999999
Q ss_pred CEEEcCCCcEEEEeccCccc
Q 002580 804 NVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 804 NILl~~~~~vkL~DFG~s~~ 823 (905)
|||++ ++.++|+|||.+..
T Consensus 155 NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred HEEEE-CCcEEEEECCCcee
Confidence 99997 57899999998854
No 459
>PRK13558 bacterio-opsin activator; Provisional
Probab=99.21 E-value=9.9e-11 Score=143.45 Aligned_cols=123 Identities=40% Similarity=0.741 Sum_probs=109.8
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 556 (905)
++.++++++++++++|..+.+|.|+|+|+++++++||++++++|+++..+.+++........+...+..+..+..+++.+
T Consensus 150 ~~~~~~~~~~gi~~~d~~~~dg~i~~~N~~~~~l~G~~~eel~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 229 (665)
T PRK13558 150 KERALDEAPVGITIADATLPDEPLIYINDAFERITGYSPDEVLGRNCRFLQGEDTNEERVAELREAIDEERPTSVELRNY 229 (665)
T ss_pred HHHHHhcCCccEEEEcCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHHHhcCCCccHHHHHHHHHHHhcCCCeEEEEEEE
Confidence 46789999999999986545677999999999999999999999998888877777777777788888888899999999
Q ss_pred ecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccccC
Q 002580 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNS 599 (905)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~ 599 (905)
++||..+|+.++..|+++.+|.+.+++++++|||++|++++++
T Consensus 230 ~~dG~~~~~~~~~~pi~d~~G~~~~~vgi~~DITerk~~E~~L 272 (665)
T PRK13558 230 RKDGSTFWNQVDIAPIRDEDGTVTHYVGFQTDVTERKEAELAL 272 (665)
T ss_pred CCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999975543
No 460
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.20 E-value=7.2e-11 Score=118.17 Aligned_cols=128 Identities=24% Similarity=0.306 Sum_probs=95.9
Q ss_pred cccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCC-cceEEEEEEeCCeEEEEEeccC
Q 002580 677 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHVCLITDYCP 755 (905)
Q Consensus 677 ~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~~lV~E~~~ 755 (905)
++.|+.|.++.||++.. .+..|++|+...... ....+..|+.+++.+.+.+ +++++.+.. ...++||||++
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~ 74 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIE 74 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecC
Confidence 35688999999999987 477899998765421 1224567888888885444 456665543 34579999999
Q ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-----eeCCCCCCCEEEcCCCcEEEEeccCccc
Q 002580 756 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGI-----IYRDLKPENVLLQGNGHVSLTDFDLSCL 823 (905)
Q Consensus 756 gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gI-----vHrDLKp~NILl~~~~~vkL~DFG~s~~ 823 (905)
|.++... . . ....++.+++.+|..||+.++ +|+|++|.||+++ ++.++++|||.+..
T Consensus 75 G~~l~~~--~-----~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 75 GSELLTE--D-----F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred CCccccc--c-----c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9887543 0 1 112356789999999999985 9999999999999 67899999999854
No 461
>TIGR02040 PpsR-CrtJ transcriptional regulator PpsR. This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954).
Probab=99.19 E-value=1.4e-10 Score=134.99 Aligned_cols=125 Identities=18% Similarity=0.142 Sum_probs=93.2
Q ss_pred HHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCC-hhhhcCCCCcccCCCCCChHHHHHHHHHHH-cCCcEEEE
Q 002580 192 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT-SKEVVGRNCRFLQGAGTDPEDVAKIRETLQ-NGQSYCGR 269 (905)
Q Consensus 192 ~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys-~eEliG~~~~~l~~~~~~~~~~~~i~~~l~-~g~~~~~e 269 (905)
+.++.++++++++|+++|. +|+|+++|++|++++||+ .++++|+++..+.++... ....+...+. .|.....+
T Consensus 252 ~~~~~l~e~~~d~I~v~D~---~G~I~~~N~a~~~l~G~~~~~~l~G~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~ 326 (442)
T TIGR02040 252 ENLARLYHEAPDAIVFSDA---DGTIRGANEAFLELTDSSSLEAVRGRTLDRWLGRGGV--DLRVLLSNVRRTGQVRLYA 326 (442)
T ss_pred HHHHHHHHhCCceEEEEcC---CCcEEehhHHHHHHhCCCChHHHcCCCHHHHhCCCcc--cHHHHHHHHhhcCceEEEE
Confidence 3689999999999999999 999999999999999997 578999997644432221 1233333343 34444456
Q ss_pred EEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChh
Q 002580 270 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPE 325 (905)
Q Consensus 270 ~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~ 325 (905)
....++||+.+|++++..|+.+.++ ..++++++|||++++.+. ....+.|+.
T Consensus 327 ~~~~~~~G~~~~ve~s~~~i~~~~~--~~~~~v~rDITeR~~~~~--~~~~~~l~~ 378 (442)
T TIGR02040 327 TTLTGEFGAQTEVEISAAWVDQGER--PLIVLVIRDISRRLTMRD--VPATGVLPR 378 (442)
T ss_pred EEEEcCCCCEEEEEEEEEEeccCCc--eEEEEEEecchhhccCCC--CCCcccchh
Confidence 6678999999999999999986554 358889999999988853 333344443
No 462
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.19 E-value=1.6e-10 Score=132.15 Aligned_cols=168 Identities=14% Similarity=0.139 Sum_probs=129.4
Q ss_pred EEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCC
Q 002580 690 LVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTK 769 (905)
Q Consensus 690 ~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~ 769 (905)
.+..+.++.++.+..++... ........+-++.|+.++||||+++++.++..+.+|||+|.+ ..|..+++..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~---~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l--- 101 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSN---GEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL--- 101 (690)
T ss_pred ccceeccCCceEEEEEeCCC---chhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh---
Confidence 45666778888888887552 234556677888899999999999999999999999999998 4788888763
Q ss_pred CCCHHHHHHHHHHHHHHHHHHH-HCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCc
Q 002580 770 VLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 848 (905)
Q Consensus 770 ~l~~~~~~~i~~qil~gL~~LH-~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (905)
....+...+.||+.||.||| +.+++|++|..+.|+++..|..||++|-+++.......
T Consensus 102 --~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------------------- 160 (690)
T KOG1243|consen 102 --GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------------------- 160 (690)
T ss_pred --HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------------------
Confidence 45667778899999999998 56899999999999999999999999998754321110
Q ss_pred ccccccccccccccCCccccccccccCC-CCchHHHHHHHHHHHHhC
Q 002580 849 VFMAEPMRASNSFVGTEEYIAPVSDFAY-TRMTRYNYLILVSKKFME 894 (905)
Q Consensus 849 ~~~~~~~~~~~~~~gT~~Y~APE~l~~~-~~sDiwSlGvil~elltg 894 (905)
......--..|..|+.+..+ -..|.|-|||++++++.|
T Consensus 161 --------~~~~~~~~~s~~~P~~~~~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 161 --------PAKSLYLIESFDDPEEIDPSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred --------ccccchhhhcccChhhcCccccchhhhhHHHHHHHHhCc
Confidence 00111122346667665532 367999999999999999
No 463
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.18 E-value=2.3e-10 Score=111.32 Aligned_cols=147 Identities=19% Similarity=0.198 Sum_probs=110.7
Q ss_pred ecccccccCceEEEEEEEcCCCeEEEEEEeeccc-----ccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEE
Q 002580 676 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGV-----MLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 750 (905)
Q Consensus 676 i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~-----~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 750 (905)
.+..|-+|+-+.|+.+.+ .|+.+.||.-.... +...-...+..+|+.+|.++.--.|.-..-+|.+...-+|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 456788999999999988 78888888543322 22233456778999999988654554444446666777899
Q ss_pred EeccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCC---cEEEEeccCcccc
Q 002580 751 TDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLT 824 (905)
Q Consensus 751 ~E~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~---~vkL~DFG~s~~~ 824 (905)
|||++| .++.+++...-...........++++|-..+.-||..+|||+||..+||++.+++ .+.|+|||++...
T Consensus 89 ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 999977 4788888765444444445578899999999999999999999999999997665 3589999998654
No 464
>PRK10060 RNase II stability modulator; Provisional
Probab=99.18 E-value=7.9e-11 Score=143.54 Aligned_cols=119 Identities=16% Similarity=0.157 Sum_probs=96.9
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcC-cCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFL-QGPETDPATVRKIRAAIDNQTDVTVQLIN 555 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l-~~~~~~~~~~~~~~~~l~~g~~~~~e~~~ 555 (905)
++.++++++++|+++|. +|+|+++|++|++++||+.+|++|++...+ .++++.......+...+..+..+..|.++
T Consensus 113 ~~~v~~~~~~gI~i~D~---~g~I~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 189 (663)
T PRK10060 113 AEQVVSEANSVIVILDS---RGNIQRFNRLCEEYTGLKEHDVIGQSVFKLFMSRREAAASRRNIRGFFRSGNAYEVERWI 189 (663)
T ss_pred HHHHHhhCCceEEEEeC---CCCEEEEcHHHHHHHCcCHHHHcCCCHHHHhCChhhHHHHHHHHHHHHhcCCceEEEEEE
Confidence 57889999999999999 566999999999999999999999996544 45555555666777778888899999999
Q ss_pred EecCCcEEEEEEEEeeeecCCC-CEEEEEEEeecCcccccccccC
Q 002580 556 YTKSGKKFWNLFHLQPMRDQKG-EVQYFIGVQLDGSEHLEPLRNS 599 (905)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G-~i~~~i~i~~DITerk~~e~~~ 599 (905)
.+++|..+|+.....+ .+..| ...+++++.+|||++|+.++++
T Consensus 190 ~~~~G~~~~~~~~~~~-~~~~g~~~~~~i~~~~DITe~k~~e~~l 233 (663)
T PRK10060 190 KTRKGQRLFLFRNKFV-HSGSGKNEIFLICSGTDITEERRAQERL 233 (663)
T ss_pred EeCCCCEEEEEeeeEE-EcCCCCceEEEEEEEEechHHHHHHHHH
Confidence 9999999998766544 44444 4467889999999999865443
No 465
>TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL. NifL is a modulator of the nitrogen fixation positive regulator protein NifA, and is therefore a negative regulator. It binds NifA. NifA and NifL are encoded by adjacent genes.
Probab=99.15 E-value=8.7e-11 Score=137.96 Aligned_cols=118 Identities=25% Similarity=0.435 Sum_probs=105.9
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 556 (905)
|+.++++++++++++|. +|+++++|+++++++||++++++|++...+.++.......+.+...+..+..+..+....
T Consensus 6 ~~~i~~~~~~~i~~~d~---~g~~~~~N~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (494)
T TIGR02938 6 YRQTVDQAPLAISITDL---KANILYANDAFTRITGYTKEEIIGKNESVLSNHTTPPEVYQALWGSLAEQKPWAGKLLNR 82 (494)
T ss_pred HHHHHHhCCceEEEECC---CCcEEEEchhheeecCCCHHHHhCCCchhhcCCCCCHHHHHHHHHHHHhCCcccceeecc
Confidence 89999999999999999 555999999999999999999999987777777667777777778888888888888889
Q ss_pred ecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccc
Q 002580 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLR 597 (905)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~ 597 (905)
+++|+.+|+.....|+++.+|.+.+++++++|||++|++++
T Consensus 83 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIt~~k~~e~ 123 (494)
T TIGR02938 83 RKDGELYLAELTVAPVLNEAGETTHFLGMHRDITELHRLEQ 123 (494)
T ss_pred CCCccchhhheeeEEEECCCCCEEEEEEehhhhhHHHHHHH
Confidence 99999999999999999999999999999999999998543
No 466
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.14 E-value=5.4e-10 Score=100.05 Aligned_cols=120 Identities=20% Similarity=0.409 Sum_probs=97.2
Q ss_pred HHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcC-CcEEEEE
Q 002580 192 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG-QSYCGRL 270 (905)
Q Consensus 192 ~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g-~~~~~e~ 270 (905)
..++.+++.++++++++|. +|.++++|+++++++|++.++++|+++..+.++.........+...+..+ ......+
T Consensus 3 ~~~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (124)
T TIGR00229 3 ERYRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEER 79 (124)
T ss_pred hHHHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEe
Confidence 4578899999999999998 99999999999999999999999998776666555555555555555533 2233445
Q ss_pred EEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHH
Q 002580 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 315 (905)
Q Consensus 271 ~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~ 315 (905)
....++|..+|+..+..|+. .+|...+++++..|||++++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~~~ 123 (124)
T TIGR00229 80 RVRRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAEEA 123 (124)
T ss_pred eeEcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHHhc
Confidence 55588999999999999998 788899999999999999988754
No 467
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.14 E-value=7.2e-10 Score=108.70 Aligned_cols=135 Identities=21% Similarity=0.213 Sum_probs=101.3
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHH-----HHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEEEEEe
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN-----KVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 752 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~-----~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 752 (905)
..+++|+-+.+|.+.. -|..+++|.-.++..-.+. -..+..+|..++..+.--.|+..+-++.+.+...|+||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 3578999999999866 3445777764443332222 23566789999998865555555545566777889999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCcccc
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 824 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~ 824 (905)
|++|..|.+++... ...++..+-.-+.-||..||+|+||.++||++..++ +.++|||++...
T Consensus 80 ~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 80 YIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred EeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 99999999888764 134566777778899999999999999999998654 999999999754
No 468
>PRK11359 cyclic-di-GMP phosphodiesterase; Provisional
Probab=99.14 E-value=4.3e-10 Score=140.92 Aligned_cols=142 Identities=14% Similarity=0.178 Sum_probs=117.9
Q ss_pred cceeEEeeeecCCcccccccchHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCccc-CCCC
Q 002580 169 NSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFL-QGAG 247 (905)
Q Consensus 169 ~~~~~~~~i~~~~~~~~~l~~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l-~~~~ 247 (905)
.+.++..||++++.. .+....+..+++.++++++++|. +|+++++|+++++++||+.++++|+++..+ .++.
T Consensus 117 ~~~~~~~DiT~~~~~----~~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~e~~g~~~~~~~~~~~ 189 (799)
T PRK11359 117 YYLALVRDASVEMAQ----KEQTRQLIIAVDHLDRPVIVLDP---ERRIVQCNRAFTEMFGYCISEASGMQPDTLLNIPE 189 (799)
T ss_pred EEEEEEeeccchhhh----HHHHHHHHHHHhcCCCcEEEEcC---CCcEEEEChhhHhhhCCCHHHHCCCChHHhcCCCC
Confidence 455677888866433 33445667789999999999998 999999999999999999999999997744 4445
Q ss_pred CChHHHHHHHHHHHcCCcEEEEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 002580 248 TDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (905)
Q Consensus 248 ~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~ 317 (905)
........++..+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++++.+|||+++++++..+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~v~d~~g~~~~~~~~~~DITerk~~e~~~~ 259 (799)
T PRK11359 190 FPADNRIRLQQLLWKTARDQDEFLLLTRTGEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEG 259 (799)
T ss_pred CcHHHHHHHHHhhccCCCCcceeEEeCCCCCEEEEEeeeeeeecCCCceeEEEEEeehhhhHHHHHHHHH
Confidence 5555666677777778888888888999999999999999999999999999999999999998876543
No 469
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=6.3e-11 Score=134.48 Aligned_cols=204 Identities=20% Similarity=0.142 Sum_probs=158.6
Q ss_pred cCCCeeecccccc--cCceEEEEEEE--cCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeC
Q 002580 670 NLQHFRPIKPLGS--GDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTK 744 (905)
Q Consensus 670 ~~~~y~i~~~Lg~--G~~g~V~~~~~--~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~ 744 (905)
....+.+.+.+|. |.+|.||.+.. ..++..+|+|.-+.. .........-.+|+.-...+ .|+|.++.+..+...
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p-~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~ 190 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIP-FSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS 190 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCC-CCCccccccccchhhcccccCccccccccCcccccC
Confidence 3456777888999 99999999988 888999999974432 11222223344566555666 489999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeeCCCCCCCEEEcCC-CcEEEEecc
Q 002580 745 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVV----ALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFD 819 (905)
Q Consensus 745 ~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~----gL~~LH~~gIvHrDLKp~NILl~~~-~~vkL~DFG 819 (905)
+..|+-+|+| +.+|..+.... ...++...++.++.+... ||.++|+.+++|-|+||.||++..+ ...+++|||
T Consensus 191 ~~lfiqtE~~-~~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 191 GILFIQTELC-GESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred Ccceeeeccc-cchhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcc
Confidence 9999999999 67888877643 344788899999999999 9999999999999999999999998 889999999
Q ss_pred CccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccC--CCCchHHHHHHHHHHHHhCCCC
Q 002580 820 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA--YTRMTRYNYLILVSKKFMEFQP 897 (905)
Q Consensus 820 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~--~~~sDiwSlGvil~elltg~~P 897 (905)
+...++...... .........|...|++||...+ ....|+|++|.++.+..++..+
T Consensus 269 ~v~~i~~~~~~~----------------------~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~ 326 (524)
T KOG0601|consen 269 LVSKISDGNFSS----------------------VFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHL 326 (524)
T ss_pred eeEEccCCcccc----------------------ceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhccc
Confidence 987765332211 0011112257778999999995 5589999999999999988766
Q ss_pred c
Q 002580 898 F 898 (905)
Q Consensus 898 F 898 (905)
+
T Consensus 327 ~ 327 (524)
T KOG0601|consen 327 P 327 (524)
T ss_pred c
Confidence 5
No 470
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.09 E-value=5.7e-11 Score=140.87 Aligned_cols=231 Identities=24% Similarity=0.306 Sum_probs=165.4
Q ss_pred ccCCCeeecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEeCCeEE
Q 002580 669 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 748 (905)
Q Consensus 669 ~~~~~y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 748 (905)
...+.+.+.+.+-+|.++.++.+.-..+|...++|+..+......+..+....+-.++-...+|.++...-.+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 45678888899999999999999988888777877766543333333444444444444445676666655566778899
Q ss_pred EEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCCCC
Q 002580 749 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 828 (905)
Q Consensus 749 lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~ 828 (905)
++++|+.+++|...++..+ +.+..-++.++..+..+++|||...+.|+|++|.|+++..+|..++.|||........+
T Consensus 881 L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~ 958 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIP 958 (1205)
T ss_pred hhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccccccc
Confidence 9999999999999987753 46777777788889999999999999999999999999999999999999654443321
Q ss_pred CCCCCc--ch--hhhccccCCCCcccccccccccccccCCccccccccccC---CCCchHHHHHHHHHHHHhCCCCchhh
Q 002580 829 QLLLPT--TN--EKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFA---YTRMTRYNYLILVSKKFMEFQPFPIL 901 (905)
Q Consensus 829 ~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~---~~~sDiwSlGvil~elltg~~PF~~~ 901 (905)
...-.. .+ -..+-......+..............||+.|.+||.+.+ ....|.|++|+++++.++|.+||...
T Consensus 959 p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 959 PTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred CcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence 111000 00 000000011111111222344566789999999999984 56889999999999999999999654
No 471
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.07 E-value=5.4e-10 Score=99.38 Aligned_cols=86 Identities=29% Similarity=0.408 Sum_probs=74.4
Q ss_pred eEeeCHHHHHHcCCChhhhcCCC----CCcCcCCCCCHHHHHHHHH-HHHcCCcEEEEEEEEecCCcEEEEEEEEeeeec
Q 002580 500 IIFASDSFLELTEYSREEILGRN----CRFLQGPETDPATVRKIRA-AIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRD 574 (905)
Q Consensus 500 I~~vN~a~~~l~Gys~eEliGk~----~~~l~~~~~~~~~~~~~~~-~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d 574 (905)
|+|||+++++++||+++++ |.. +..++||++.....+.+.. ....+..+..+++++++||+.+|+..+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 6678999999999999999 778888999999999999999999999999999
Q ss_pred CCCCEEEEEEEe
Q 002580 575 QKGEVQYFIGVQ 586 (905)
Q Consensus 575 ~~G~i~~~i~i~ 586 (905)
.+|.++.++|++
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999974
No 472
>TIGR00229 sensory_box PAS domain S-box. The PAS domain was previously described. This sensory box, or S-box domain occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include heme in the oxygen sensor FixL, FAD in the redox potential sensor NifL, and a 4-hydroxycinnamyl chromophore in photoactive yellow protein. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator.
Probab=99.06 E-value=1.2e-09 Score=97.67 Aligned_cols=116 Identities=22% Similarity=0.361 Sum_probs=94.9
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcC-CcEEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLIN 555 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g-~~~~~e~~~ 555 (905)
++.++++++++++++|. ++.++++|+++++++|++.++++|++...+.++.........+...+..+ .....+..+
T Consensus 5 ~~~~~~~~~~~~~~~d~---~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (124)
T TIGR00229 5 YRAIFESSPDAIIVIDL---EGNILYVNPAFEEIFGYSAEELIGRNVLELIPEEDREEVRERIERLLEGEREPVSEERRV 81 (124)
T ss_pred HHHHHhhCCceEEEEcC---CCcEEEEchHHHHHhCCChHHhcCcchhhhcChhhhHHHHHHHHHHHcCCCCCcceEeee
Confidence 78899999999999999 55599999999999999999999998777777766665555555555533 234445555
Q ss_pred EecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCccccccc
Q 002580 556 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 596 (905)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e 596 (905)
..++|..+|+..+..|+. .+|...++++++.|||++++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~dit~~~~~~ 121 (124)
T TIGR00229 82 RRKDGSEIWVEVSVSPIR-TNGGELGVVGIVRDITERKQAE 121 (124)
T ss_pred EcCCCCEEEEEEEEeehh-hCCCeeEEEEEeeehhHHHHHH
Confidence 688999999999999998 7888999999999999998843
No 473
>PF08447 PAS_3: PAS fold; InterPro: IPR013655 The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs []. The PAS fold appears in archaea, eubacteria and eukarya. The PAS domain contains a sensory box, or S-box domain that occupies the central portion of the PAS domain but is more widely distributed. It is often tandemly repeated. Known prosthetic groups bound in the S-box domain include haem in the oxygen sensor FixL [], FAD in the redox potential sensor NifL [], and a 4-hydroxycinnamyl chromophore in photoactive yellow protein []. Proteins containing the domain often contain other regulatory domains such as response regulator or sensor histidine kinase domains. Other S-box proteins include phytochromes and the aryl hydrocarbon receptor nuclear translocator. This domain has been found in the gene product of the madA gene of the filamentous zygomycete fungus Phycomyces blakesleeanus. It has been shown that MadA encodes a blue-light photoreceptor for phototropism and other light responses. The gene is involved in the phototropic responses associated with sporangiophore growth; they exhibit phototropism by bending toward near-UV and blue wavelengths and away from far-UV wavelengths in a manner that is physiologically similar to plant phototropic responses [].; GO: 0005515 protein binding; PDB: 3NJA_D 3H9W_A 3GDI_B 3ICY_A 3EEH_A 3MR0_B.
Probab=99.03 E-value=1.3e-09 Score=96.79 Aligned_cols=86 Identities=28% Similarity=0.453 Sum_probs=73.6
Q ss_pred EEEcCHHHHHHcCCChhhhcCCC----CcccCCCCCChHHHHHHHH-HHHcCCcEEEEEEEEccCCCeEEEEEEeeeeec
Q 002580 217 IMYASAGFFKMTGYTSKEVVGRN----CRFLQGAGTDPEDVAKIRE-TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKD 291 (905)
Q Consensus 217 I~~~N~a~~~l~Gys~eEliG~~----~~~l~~~~~~~~~~~~i~~-~l~~g~~~~~e~~~~~kdG~~~w~~~s~~pi~d 291 (905)
|+|+|++|++++||+++++ |.. +..+.+|++.......+.. .+..+..+..+++.+++||+.+|++.+..+++|
T Consensus 1 ~i~~s~~~~~i~G~~~~~~-~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~~e~R~~~~~G~~~wi~~~~~~~~d 79 (91)
T PF08447_consen 1 IIYWSDNFYEIFGYSPEEI-GKPDFEEWLERIHPDDRERVRQAIQQAALQNGEPFEIEYRIRRKDGEYRWIEVRGRPIFD 79 (91)
T ss_dssp -EEE-THHHHHHTS-HHHH-TCBEHHHHHHHB-TTTHHHHHHHHHHHHHHTT-EEEEEEEEEGTTSTEEEEEEEEEEEET
T ss_pred CEEEeHHHHHHhCCCHHHh-ccCCHHHHHhhcCHHHHHHHHHHHHHHhhccCcceEEEEEEECCCCCEEEEEEEEEEEEC
Confidence 6899999999999999999 766 5577888988889999999 788888999999999999999999999999999
Q ss_pred CCCCEEEEEEEE
Q 002580 292 DEGKVLKFIGMQ 303 (905)
Q Consensus 292 ~~G~v~~~v~~~ 303 (905)
.+|++.+++|++
T Consensus 80 ~~g~~~~~~Gv~ 91 (91)
T PF08447_consen 80 ENGKPIRIIGVI 91 (91)
T ss_dssp TTS-EEEEEEEE
T ss_pred CCCCEEEEEEEC
Confidence 999999999974
No 474
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.92 E-value=5.1e-09 Score=109.41 Aligned_cols=140 Identities=24% Similarity=0.320 Sum_probs=103.7
Q ss_pred ccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCC--CCcceEEEEEEeC---CeEEEEEe
Q 002580 678 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTK---THVCLITD 752 (905)
Q Consensus 678 ~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~---~~~~lV~E 752 (905)
+.|+.|.++.||++.... |..|++|........ .....+..|..+++.+.+ .++++++.+.... +..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEE
Confidence 568999999999998743 578999987654211 124567889999999865 4467888776653 36789999
Q ss_pred ccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 002580 753 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------------- 792 (905)
Q Consensus 753 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~---------------------------------------- 792 (905)
|++|.++...+.. ..++......++.+++..|..||+
T Consensus 81 ~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 81 RVDGRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred EeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 9999888665421 125666666667777777777763
Q ss_pred ----------------CCCeeCCCCCCCEEEcC--CCcEEEEeccCccc
Q 002580 793 ----------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 823 (905)
Q Consensus 793 ----------------~gIvHrDLKp~NILl~~--~~~vkL~DFG~s~~ 823 (905)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 56789999998854
No 475
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.89 E-value=2.9e-08 Score=106.53 Aligned_cols=135 Identities=19% Similarity=0.063 Sum_probs=95.9
Q ss_pred EEEEEEEcCCCeEEEEEEeecccccC--------HHHHHHHHHHHHHHHhCCCCC--cceEEEEEEe-----CCeEEEEE
Q 002580 687 SVHLVELCGSGQYFAMKAMDKGVMLN--------RNKVHRACAEREILDMLDHPF--VPALYASFQT-----KTHVCLIT 751 (905)
Q Consensus 687 ~V~~~~~~~t~~~vavK~~~~~~~~~--------~~~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~-----~~~~~lV~ 751 (905)
.|+.+.. .|+.|.||......... ......+.+|...+..|...+ ++.++.++.. ....+|||
T Consensus 37 rvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 3555554 56788899764332100 011124678888888874333 3445555543 23578999
Q ss_pred eccCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcC-------CCcEEEEeccCccc
Q 002580 752 DYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-------NGHVSLTDFDLSCL 823 (905)
Q Consensus 752 E~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~-------~~~vkL~DFG~s~~ 823 (905)
|++++. +|.+++........+......++.+++..+.-||..||+|+||+++|||++. ++.+.|+||+.+..
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 999875 8999886432334566777889999999999999999999999999999975 46899999998854
No 476
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.84 E-value=7.1e-08 Score=81.84 Aligned_cols=102 Identities=25% Similarity=0.477 Sum_probs=86.8
Q ss_pred ccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEEEEEccCCCeEE
Q 002580 202 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFW 281 (905)
Q Consensus 202 ~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w 281 (905)
+++++++|. +|.++++|+++++++|++.++++|+++..+.++.........+...+..+.....++.....+|...|
T Consensus 2 ~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (103)
T cd00130 2 PDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVIW 78 (103)
T ss_pred CceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEEE
Confidence 578889988 99999999999999999999999999876666666556666666666666667778888888899999
Q ss_pred EEEEeeeeecCCCCEEEEEEEEecc
Q 002580 282 NLLTIAPIKDDEGKVLKFIGMQVEV 306 (905)
Q Consensus 282 ~~~s~~pi~d~~G~v~~~v~~~~DI 306 (905)
+.....++.+..|...+++++.+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 79 VLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEecCCCCEEEEEEEEecC
Confidence 9999999999889999999999886
No 477
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.83 E-value=9.4e-09 Score=115.53 Aligned_cols=137 Identities=13% Similarity=0.158 Sum_probs=99.1
Q ss_pred cHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002580 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 555 (905)
Q Consensus 476 ~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~ 555 (905)
.++.++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.+... .....+...+..+..+..+...
T Consensus 8 ~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 82 (348)
T PRK11073 8 DAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNEVT 82 (348)
T ss_pred hHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccceE
Confidence 478999999999999999 56699999999999999999999999877765432 2223445566666655544455
Q ss_pred EecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccccCCchhhhHHHHHHHHHHhhhhhhh
Q 002580 556 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 622 (905)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~~~~~~~~e~~~l~~~~~~~~~~~ 622 (905)
..+||+.+|+.++..|+. . .+++..++|||++++.++++..+........++..++|.+...
T Consensus 83 ~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~~~~~~~~~~~~~~~iaHelr~p 144 (348)
T PRK11073 83 LVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNP 144 (348)
T ss_pred EEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHHHHHHHHHHHHHHHhhhHhhcCh
Confidence 678999999999999997 2 2467779999999886554443333333344444455554443
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.83 E-value=2.1e-09 Score=122.18 Aligned_cols=196 Identities=18% Similarity=0.222 Sum_probs=146.1
Q ss_pred cccCCCeeecccccccCceEEEEEEEc-CCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEEeCC
Q 002580 668 QINLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 745 (905)
Q Consensus 668 ~~~~~~y~i~~~Lg~G~~g~V~~~~~~-~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 745 (905)
.....+|..+..||.|.|+.|+.+... .++..|++|.+.+.......+. .-..|+.+...+ .|.+++.++..|....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh-cchhhhhHhhHhhcccccCCCCCCccccc
Confidence 345678999999999999999998765 6788999998877644333332 233455555555 5889999888888888
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCC-CcEEEEeccCcccc
Q 002580 746 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLT 824 (905)
Q Consensus 746 ~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~-~~vkL~DFG~s~~~ 824 (905)
..|+-.|||+++++.....- ...+.+...+.+..|++.++.++|++.++|+|+||+||++..+ +..++.|||+.+-.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred cccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhcccccccccc
Confidence 88899999999887655522 2347778888999999999999999999999999999999876 78899999987432
Q ss_pred CCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccc-cccccc----CCCCchHHHHHHHHHHHHhCCC
Q 002580 825 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI-APVSDF----AYTRMTRYNYLILVSKKFMEFQ 896 (905)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~-APE~l~----~~~~sDiwSlGvil~elltg~~ 896 (905)
.-. ...+.+.-.++ .+|++. ...+.|+||||..+++.+++..
T Consensus 418 ~~~------------------------------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ 464 (524)
T KOG0601|consen 418 AFS------------------------------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP 464 (524)
T ss_pred cee------------------------------cccccccccccccchhhccccccccccccccccccccccccCcc
Confidence 100 11122333444 244444 3459999999999999998754
No 479
>cd00130 PAS PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in signal transduction.
Probab=98.82 E-value=9.3e-08 Score=81.10 Aligned_cols=103 Identities=28% Similarity=0.453 Sum_probs=87.9
Q ss_pred hcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEE
Q 002580 484 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 563 (905)
Q Consensus 484 ~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~ 563 (905)
++++++++|. ++.++++|+++++++|++.++++|+....+.++.........+......+.....+......+|..+
T Consensus 1 ~~~~i~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (103)
T cd00130 1 LPDGVIVLDL---DGRILYANPAAEQLLGYSPEELIGKSLLDLIHPEDREELRERLENLLSGGEPVTLEVRLRRKDGSVI 77 (103)
T ss_pred CCceEEEECC---CCcEEEECHHHHHHhCCCHHHHcCccHHHhcCCccchHHHHHHHHHHhcCcCeEEEEEEEccCCCEE
Confidence 3578999999 5559999999999999999999999977777777776666666666666667778888888999999
Q ss_pred EEEEEEeeeecCCCCEEEEEEEeecC
Q 002580 564 WNLFHLQPMRDQKGEVQYFIGVQLDG 589 (905)
Q Consensus 564 wv~~~~~pi~d~~G~i~~~i~i~~DI 589 (905)
|+.+...++.+..|...+++++.+||
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~di 103 (103)
T cd00130 78 WVLVSLTPIRDEGGEVIGLLGVVRDI 103 (103)
T ss_pred EEEEEEEEEecCCCCEEEEEEEEecC
Confidence 99999999999888999999999886
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.81 E-value=2.1e-08 Score=101.51 Aligned_cols=128 Identities=23% Similarity=0.209 Sum_probs=83.4
Q ss_pred EEEEEEEcCCCeEEEEEEeeccccc-----------------------CHHHHHHHHHHHHHHHhCCCC--CcceEEEEE
Q 002580 687 SVHLVELCGSGQYFAMKAMDKGVML-----------------------NRNKVHRACAEREILDMLDHP--FVPALYASF 741 (905)
Q Consensus 687 ~V~~~~~~~t~~~vavK~~~~~~~~-----------------------~~~~~~~~~~E~~il~~l~h~--nIv~l~~~~ 741 (905)
.||.|.. ..|..+|+|+....... .........+|...|..+..- ++++++++.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888887 46779999998753100 001124567899999999755 578887653
Q ss_pred EeCCeEEEEEeccC--CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHH-HHHCCCeeCCCCCCCEEEcCCCcEEEEec
Q 002580 742 QTKTHVCLITDYCP--GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEY-LHCQGIIYRDLKPENVLLQGNGHVSLTDF 818 (905)
Q Consensus 742 ~~~~~~~lV~E~~~--gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~-LH~~gIvHrDLKp~NILl~~~~~vkL~DF 818 (905)
..+|||||++ |..+..+.... ++......++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+||
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ----CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEec
Confidence 3479999997 65565544322 2234456677788885555 579999999999999999977 9999999
Q ss_pred cCcccc
Q 002580 819 DLSCLT 824 (905)
Q Consensus 819 G~s~~~ 824 (905)
|.+...
T Consensus 151 ~qav~~ 156 (188)
T PF01163_consen 151 GQAVDS 156 (188)
T ss_dssp TTEEET
T ss_pred Ccceec
Confidence 988543
No 481
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.81 E-value=6.3e-09 Score=109.20 Aligned_cols=149 Identities=20% Similarity=0.254 Sum_probs=110.9
Q ss_pred HHHHhCCCCCcceEEEEEEeCC-----eEEEEEeccCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--
Q 002580 724 EILDMLDHPFVPALYASFQTKT-----HVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG-- 794 (905)
Q Consensus 724 ~il~~l~h~nIv~l~~~~~~~~-----~~~lV~E~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~gL~~LH~~g-- 794 (905)
..|-++.|.||++++.|+.+.. ...+++||+..|+|..+|++. ..+.+......+++.||+.||.|||+..
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 3455667999999999987654 488999999999999999863 2345778888899999999999999985
Q ss_pred CeeCCCCCCCEEEcCCCcEEEEeccCccccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc
Q 002580 795 IIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF 874 (905)
Q Consensus 795 IvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~ 874 (905)
|+|+++..+-|++..+|-+||.--....... + +.........-..+-++|.|||.-.
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~--------s---------------~~~~~~~Ek~~~~~~~g~~a~~sg~ 255 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP--------S---------------VNSTREAEKSVNTSLPGFSAPESGT 255 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccch--------h---------------hhhhhHhhhhccccCCccccCCcCc
Confidence 9999999999999999988874322111110 0 0000001112234678999999876
Q ss_pred ---CCCCchHHHHHHHHHHHHhCC
Q 002580 875 ---AYTRMTRYNYLILVSKKFMEF 895 (905)
Q Consensus 875 ---~~~~sDiwSlGvil~elltg~ 895 (905)
....+|||+||+..++|..+.
T Consensus 256 ~tn~~~a~dIy~fgmcAlemailE 279 (458)
T KOG1266|consen 256 TTNTTGASDIYKFGMCALEMAILE 279 (458)
T ss_pred ccccccchhhhhhhHHHHHHHHhe
Confidence 356999999999999998764
No 482
>COG3829 RocR Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]
Probab=98.80 E-value=4.1e-08 Score=110.57 Aligned_cols=221 Identities=19% Similarity=0.214 Sum_probs=152.1
Q ss_pred HHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEEEEEcc
Q 002580 196 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 275 (905)
Q Consensus 196 ~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~k 275 (905)
.+++.++++++++|. ...|.++|..+..+++-....++|+++..+.+...-.... .+..+........+
T Consensus 5 ~~l~~~~~~~~vi~~---~~~~~~~~~~a~~~~~~~~~~~i~~~~~~i~~~~~~~~v~--------~~~~~~~~~~~~~~ 73 (560)
T COG3829 5 GILKSILDGPVVIDK---NTGIDVANALALAKRQKNAEAVIGRPLREILETLGMERVE--------QSRDKELTERLKLK 73 (560)
T ss_pred hhhhhcccceEEEEc---CCceeeechHHHHhhhcceEEEecccceeeccccCcceee--------ccCccceeeeeecc
Confidence 478999999999998 7789999999999999999999999887655443222111 22222222222233
Q ss_pred CCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhcCCCCChhHHHHHHHHHHHHHHHHHHHHHHHccCCCCc
Q 002580 276 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSL 355 (905)
Q Consensus 276 dG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~~~~~l~~~l~~~~~~~~~~~~~~~~~l~~al~~~~~~ 355 (905)
+ . -..+..-++.++.|+++|+++++.|+++....-.+. +
T Consensus 74 -~-~-~~~~~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~----------------------------l---------- 112 (560)
T COG3829 74 -V-K-RIVVVGKTPVDEQGRVVGVLEVFLDISEALELIEEN----------------------------L---------- 112 (560)
T ss_pred -c-e-eEEEcCCceeecCCceeeeehhhhhhHHHHHHHHHH----------------------------H----------
Confidence 3 2 223344455678899999999999999844322111 0
Q ss_pred cccCCCCcccccCCCchhhhhhccccCccCCCCCCCcCCCCCCCccccccccccccccccccCCccccccccccccCCCC
Q 002580 356 SESTNRPPIIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTD 435 (905)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (905)
T Consensus 113 -------------------------------------------------------------------------------- 112 (560)
T COG3829 113 -------------------------------------------------------------------------------- 112 (560)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccchhccCCCCCCCCCCCCCchhhHHHHHhhhhcccHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCCh
Q 002580 436 DHDSFENEIIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSR 515 (905)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~di~e~k~~e~~~~~~~~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~ 515 (905)
..+ ...|+.+++.+.++++++|. +|.++++|+++..++|++.
T Consensus 113 ------------------------------~~~-----~~~l~~il~~~~~~l~vvD~---~G~~i~~N~~~~~~~gl~~ 154 (560)
T COG3829 113 ------------------------------RQL-----RQRLEAILDSIDDGLLVVDE---DGIIIYYNKAYAKLLGLSP 154 (560)
T ss_pred ------------------------------HHH-----HHHHHHHHhhccCceEEEcC---CCcEEEEcHHHHHHhCCCH
Confidence 000 01178999999999999999 5559999999999999999
Q ss_pred hhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccc
Q 002580 516 EEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 595 (905)
Q Consensus 516 eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~ 595 (905)
++++|++...+...... .....++..+++.......+. |... ..+..|+. .+|.+.|.+++.+|+++-+..
T Consensus 155 e~~~gk~~~~v~~~~~~----s~~l~vl~~~kp~~~~~~~~~--~~~~--i~~~~pv~-~~g~l~G~v~~~~~~~~l~~l 225 (560)
T COG3829 155 EEVLGKHLLDVVSAGED----STLLEVLRTGKPIRDVVQTYN--GNKI--IVNVAPVY-ADGQLIGVVGISKDVSELERL 225 (560)
T ss_pred HHHcCCcHHHHHhccCC----ceehhhhhcCCcceeeeeeec--CCce--eEeeccEe-cCCcEEEEEEeecchHHHHHH
Confidence 99999986666411111 123456777777554443332 2222 45566776 467999999999999998764
No 483
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.78 E-value=3.3e-08 Score=119.22 Aligned_cols=141 Identities=16% Similarity=0.139 Sum_probs=106.6
Q ss_pred cHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCc-EEEEEE
Q 002580 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLI 554 (905)
Q Consensus 476 ~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~-~~~e~~ 554 (905)
.++.++++++++++++|. +|.|+++|+++++++||++++++|++...+.++.. .....+...+..+.. ...+..
T Consensus 263 ~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 337 (607)
T PRK11360 263 LNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTEHVDLEIS 337 (607)
T ss_pred HHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCCccceEEE
Confidence 368899999999999999 55599999999999999999999999777766542 233344555555443 445667
Q ss_pred EEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccccccCCchhhhHHHHHHHHHHhhhhhhh
Q 002580 555 NYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEA 622 (905)
Q Consensus 555 ~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e~~~~~~~~~~e~~~l~~~~~~~~~~~ 622 (905)
+.+++|..+ +.++..|++|.+|.+.+++++++|||++++.+++.......+.+..++..+.+.+...
T Consensus 338 ~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~~~~~~~l~~~~~~~~hel~~~ 404 (607)
T PRK11360 338 FPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVARQERLAALGELVAGVAHEIRNP 404 (607)
T ss_pred EEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 778888876 8899999999999999999999999999997665544433334444444555544443
No 484
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.75 E-value=9.3e-08 Score=106.43 Aligned_cols=167 Identities=16% Similarity=0.182 Sum_probs=127.9
Q ss_pred ceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE----eCCeEEEEEeccCC-CCH
Q 002580 685 TGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TKTHVCLITDYCPG-GEL 759 (905)
Q Consensus 685 ~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~----~~~~~~lV~E~~~g-g~L 759 (905)
..+.|+|....+|..|++|.++.......+ ....-++.++++.|+|||++.++|. .+..+++|++|+++ ++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchH
Confidence 457899999999999999999543222221 2223466899999999999999887 34579999999986 578
Q ss_pred HHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCccccCC
Q 002580 760 FLLLDRQP-------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 826 (905)
Q Consensus 760 ~~~l~~~~-------------~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s~~~~~ 826 (905)
.++.-... +...++..+|.++.||..||.++|+.|+..+-|.|.+||++.+.+++|+..|....+-.
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 77654321 22367899999999999999999999999999999999999988999988777643221
Q ss_pred CCCCCCCcchhhhccccCCCCcccccccccccccccCCccccccccccCCCCchHHHHHHHHHHHHhCC
Q 002580 827 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDFAYTRMTRYNYLILVSKKFMEF 895 (905)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~~~~~sDiwSlGvil~elltg~ 895 (905)
++ -+-+....+-|.=.||.+++-|.||.
T Consensus 446 d~-----------------------------------------~~~le~~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 446 DP-----------------------------------------TEPLESQQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred CC-----------------------------------------CcchhHHhhhhHHHHHHHHHHHhhcc
Confidence 10 12344556788889999999999983
No 485
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.72 E-value=5.3e-08 Score=108.00 Aligned_cols=113 Identities=14% Similarity=0.114 Sum_probs=88.6
Q ss_pred chHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEE
Q 002580 189 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 268 (905)
Q Consensus 189 ~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 268 (905)
...+.++.++++++++++++|. +|+|+++|++|++++||++++++|+++..+..+ ..++..+..+.. ..
T Consensus 3 ~~~~~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~-------~~~~~~l~~~~~-~~ 71 (333)
T TIGR02966 3 ALLSRFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRH-------PEFVEYLAAGRF-SE 71 (333)
T ss_pred hHHHHHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccC-------HHHHHHHHhccc-CC
Confidence 4567789999999999999999 999999999999999999999999997755432 123444444332 22
Q ss_pred EEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 002580 269 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (905)
Q Consensus 269 e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~ 317 (905)
......++|..+|+.+.+.|+.+.+ ++++++|||++++.++..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~~~~~~ 115 (333)
T TIGR02966 72 PLELPSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRLEQMRR 115 (333)
T ss_pred CeEeecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHHHHHHH
Confidence 3445568899999999999987643 6788999999998876643
No 486
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.70 E-value=3.9e-08 Score=108.83 Aligned_cols=120 Identities=27% Similarity=0.608 Sum_probs=104.4
Q ss_pred HHHHHHhh---cccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCC--CCcCcCCCCCHHHHHHHHHHHHcCCcEEE
Q 002580 477 LATTLERI---EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 551 (905)
Q Consensus 477 l~~i~e~~---~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~--~~~l~~~~~~~~~~~~~~~~l~~g~~~~~ 551 (905)
|+.++..+ ...+++.+++-.|+.|+|+|+.||++.||.+.|++.++ +.+.+++-.+....+.+++.+++-+.-.+
T Consensus 16 LENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~qf 95 (971)
T KOG0501|consen 16 LENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETNQF 95 (971)
T ss_pred HHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhcce
Confidence 55565433 34555556666688999999999999999999999998 45677888888889999999999999899
Q ss_pred EEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCccccccc
Q 002580 552 QLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 596 (905)
Q Consensus 552 e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e 596 (905)
|+-++.|+.+.+|+.+.+.||+++...++.|+..+.|||..||+.
T Consensus 96 EillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQPi 140 (971)
T KOG0501|consen 96 EILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQPI 140 (971)
T ss_pred eeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCCC
Confidence 999999999999999999999999999999999999999999973
No 487
>PRK11073 glnL nitrogen regulation protein NR(II); Provisional
Probab=98.69 E-value=7.5e-08 Score=108.22 Aligned_cols=117 Identities=17% Similarity=0.213 Sum_probs=93.0
Q ss_pred HHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEE
Q 002580 191 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 270 (905)
Q Consensus 191 ~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 270 (905)
...+++++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.+... .....+...+..+..+....
T Consensus 6 ~~~~~~il~~~~~gi~~~d~---~~~i~~~N~a~~~~~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 80 (348)
T PRK11073 6 LPDAGQILNSLINSILLLDD---DLAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFS--LNIELMRESLQAGQGFTDNE 80 (348)
T ss_pred cchHHHHHhcCcCeEEEECC---CCeEeeEcHHHHHHhCCCHHHHcCCCHHHHcCcch--hhHHHHHHHHHcCCcccccc
Confidence 34678999999999999999 99999999999999999999999999886665432 22344556666666655545
Q ss_pred EEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhh
Q 002580 271 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 317 (905)
Q Consensus 271 ~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~ 317 (905)
..+.+||..+|+.++..|+. . .+++..++|||++++.++++.
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~--~---~~~~~~~~dit~~~~~~~~~~ 122 (348)
T PRK11073 81 VTLVIDGRSHILSLTAQRLP--E---GMILLEMAPMDNQRRLSQEQL 122 (348)
T ss_pred eEEEECCceEEEEEEEEEcc--C---ceeEEEEechhHHHHHHHHHH
Confidence 55678999999999999986 2 246677999999998877653
No 488
>TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154).
Probab=98.67 E-value=6.8e-08 Score=107.13 Aligned_cols=104 Identities=11% Similarity=0.041 Sum_probs=80.9
Q ss_pred cHHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEE
Q 002580 476 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 555 (905)
Q Consensus 476 ~l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~ 555 (905)
+|+.++++++++|+++|. +|.|+++|++|++++||++++++|++...+.+++ . +...+..+.. .....+
T Consensus 7 ~l~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~---~----~~~~l~~~~~-~~~~~~ 75 (333)
T TIGR02966 7 RFRAAAQALPDAVVVLDE---EGQIEWCNPAAERLLGLRWPDDLGQRITNLIRHP---E----FVEYLAAGRF-SEPLEL 75 (333)
T ss_pred HHHHHHHhCcCcEEEECC---CCcEEEEcHHHHHHhCCChHHHcCCcHHHHccCH---H----HHHHHHhccc-CCCeEe
Confidence 389999999999999999 5559999999999999999999999977665432 2 2333333322 233555
Q ss_pred EecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCcccccc
Q 002580 556 YTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEP 595 (905)
Q Consensus 556 ~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~ 595 (905)
..++|..+|+.+...|+.+.. ++++++|||++++.
T Consensus 76 ~~~~~~~~~~~~~~~p~~~~~-----~~~~~~dit~~~~~ 110 (333)
T TIGR02966 76 PSPINSERVLEIRIAPYGEEQ-----KLLVARDVTRLRRL 110 (333)
T ss_pred ecCCCCceEEEEEEEEcCCCc-----eEEEEeCchHHHHH
Confidence 568899999999999997642 67889999998874
No 489
>PRK11360 sensory histidine kinase AtoS; Provisional
Probab=98.66 E-value=1.5e-07 Score=113.46 Aligned_cols=127 Identities=13% Similarity=0.118 Sum_probs=103.8
Q ss_pred cccchHHHHHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCc
Q 002580 186 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 265 (905)
Q Consensus 186 ~l~~~~~~l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~ 265 (905)
.+......++.+++.++++++++|. +|+|+++|+++++++||+.++++|+++..+.++.. .....+...+..+..
T Consensus 256 ~l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~ 330 (607)
T PRK11360 256 ALRETRSLNELILESIADGVIAIDR---QGKITTMNPAAEVITGLQRHELVGKPYSELFPPNT--PFASPLLDTLEHGTE 330 (607)
T ss_pred HHHHHHHHHHHHHHhccCeEEEEcC---CCCEEEECHHHHHHhCCChHHhcCCcHHHHcCCch--hHHHHHHHHHhcCCC
Confidence 4455566778899999999999998 99999999999999999999999999887666432 234455556665554
Q ss_pred E-EEEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHHHhhc
Q 002580 266 Y-CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 318 (905)
Q Consensus 266 ~-~~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~~l~~ 318 (905)
. ..++...+++|..+ +.++..|+.+.+|++.+++++.+|||+++++|++++.
T Consensus 331 ~~~~~~~~~~~~~~~~-~~~~~~~i~~~~g~~~~~i~~~~Dite~~~~e~~l~~ 383 (607)
T PRK11360 331 HVDLEISFPGRDRTIE-LSVSTSLLHNTHGEMIGALVIFSDLTERKRLQRRVAR 383 (607)
T ss_pred ccceEEEEEcCCCcEE-EEEEEeeEEcCCCCEEEEEEEEeechHHHHHHHHHHH
Confidence 3 34566677888776 8899999999999999999999999999999988764
No 490
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.66 E-value=9.8e-08 Score=87.72 Aligned_cols=106 Identities=15% Similarity=0.275 Sum_probs=75.1
Q ss_pred HHHHHHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCcccCCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 002580 194 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 273 (905)
Q Consensus 194 l~~ile~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 273 (905)
|..+|++++.+++++|. +++|.++|+++.++++... ..+|+++..+.++. .......+.+.+..|+....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPL-SYPNLKKIIEQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HH-HHHHHHHHHHHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCcc-chHHHHHHHHHHHcCCCceEEEEe-
Confidence 56789999999999999 9999999999999999775 55799998887663 333444455666667653333333
Q ss_pred ccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccc
Q 002580 274 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 307 (905)
Q Consensus 274 ~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DIT 307 (905)
.++|. |+.+++.|++|.+|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 34554 667899999999999999999999998
No 491
>PRK09902 hypothetical protein; Provisional
Probab=98.62 E-value=8.5e-07 Score=90.48 Aligned_cols=141 Identities=14% Similarity=0.150 Sum_probs=102.9
Q ss_pred cccCceEEEEEEEcCCCeEEEEEEeeccc---ccCHHHHHHHHHHHHHHHhCCCC--CcceEEEEEEeC----CeEEEEE
Q 002580 681 GSGDTGSVHLVELCGSGQYFAMKAMDKGV---MLNRNKVHRACAEREILDMLDHP--FVPALYASFQTK----THVCLIT 751 (905)
Q Consensus 681 g~G~~g~V~~~~~~~t~~~vavK~~~~~~---~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~~~~~~----~~~~lV~ 751 (905)
|.||.+.|+.... .|..|-+|.-.... ...+.....+.+|+..|..|... .++++..+.... -.-+||+
T Consensus 27 ~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 6788889998776 33357778654221 11133556788999999888432 255555222211 2478999
Q ss_pred eccCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCc--EEEEeccCccc
Q 002580 752 DYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 823 (905)
Q Consensus 752 E~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~--vkL~DFG~s~~ 823 (905)
|-+.| .+|.+++....-.+.+......++.+|+..+.-||+.|+.|+|+-+.|||++.+|. ++++||--++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98854 58988886644445677777889999999999999999999999999999987677 99999987754
No 492
>PF13596 PAS_10: PAS domain; PDB: 3CAX_A 2QKP_D.
Probab=98.62 E-value=1.5e-07 Score=86.57 Aligned_cols=106 Identities=20% Similarity=0.301 Sum_probs=73.5
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 556 (905)
|..++++++.++.++|. +++|.|.|+++.++|+... ..+|++...+.++...+... .+.+.+..|+....+...
T Consensus 1 L~~il~s~~~~i~~vD~---~~~I~~~n~~a~~~f~~~~-~~iGr~l~~~~~~~~~~~l~-~~i~~~~~~~~~~~~~~~- 74 (106)
T PF13596_consen 1 LNNILDSMPIGIIFVDR---NLRIRYFNPAAARLFNLSP-SDIGRPLFDIHPPLSYPNLK-KIIEQVRSGKEEEFEIVI- 74 (106)
T ss_dssp HHHHHHHSSSEEEEEET---TSBEEEE-SCGC-SS---G-GGTTSBCCCSS-HHHHHHHH-HHHHHHHTTSBSEEEEEE-
T ss_pred ChHHHhcCCCCEEEEcC---CCeEEEeChhHhhhcCCCh-HHCCCCHHHcCCccchHHHH-HHHHHHHcCCCceEEEEe-
Confidence 46789999999999999 5669999999999999764 56899988887664333333 344555566653333333
Q ss_pred ecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCc
Q 002580 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGS 590 (905)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DIT 590 (905)
..+|. |+.+...|++|++|+..|++.++.|||
T Consensus 75 ~~~~~--~~~~~~~P~~~~~g~~~G~v~~~~DIT 106 (106)
T PF13596_consen 75 PNGGR--WYLVRYRPYRDEDGEYAGAVITFQDIT 106 (106)
T ss_dssp EETTE--EEEEEEEEEE-TTS-EEEEEEEEEE-G
T ss_pred cCCCE--EEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 35555 567899999999999999999999998
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.60 E-value=2.1e-07 Score=96.86 Aligned_cols=138 Identities=21% Similarity=0.182 Sum_probs=103.5
Q ss_pred eeecccccccCceEEEEEEEcCCCeEEEEEEeecccc-----------------cC--HHHHHHHHHHHHHHHhCCCC--
Q 002580 674 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-----------------LN--RNKVHRACAEREILDMLDHP-- 732 (905)
Q Consensus 674 y~i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~-----------------~~--~~~~~~~~~E~~il~~l~h~-- 732 (905)
+.+...||-|.-|.||.|.+. .|..+|+|.-..... .+ .-......+|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 345678999999999999985 688899997543210 00 01123456899999998655
Q ss_pred CcceEEEEEEeCCeEEEEEeccCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCc
Q 002580 733 FVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 812 (905)
Q Consensus 733 nIv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~ 812 (905)
.|++.+++ +..++||||++|..|...- ++......++..|+.-+.-+-..||||+|+++=||+++++|.
T Consensus 172 ~VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~ 240 (304)
T COG0478 172 KVPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGD 240 (304)
T ss_pred CCCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCC
Confidence 78887764 6788999999987775432 234445556677777777777899999999999999999999
Q ss_pred EEEEeccCccc
Q 002580 813 VSLTDFDLSCL 823 (905)
Q Consensus 813 vkL~DFG~s~~ 823 (905)
+.++||--+..
T Consensus 241 ~~vIDwPQ~v~ 251 (304)
T COG0478 241 IVVIDWPQAVP 251 (304)
T ss_pred EEEEeCccccc
Confidence 99999987643
No 494
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.60 E-value=7.2e-07 Score=92.52 Aligned_cols=107 Identities=27% Similarity=0.288 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHhCCCC--CcceEEEEEEeC----CeEEEEEeccCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHH
Q 002580 716 VHRACAEREILDMLDHP--FVPALYASFQTK----THVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALE 788 (905)
Q Consensus 716 ~~~~~~E~~il~~l~h~--nIv~l~~~~~~~----~~~~lV~E~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qil~gL~ 788 (905)
.....+|...+..|..- .++..+++.... ...++|+|++++. +|.+++..... .+......++.+++..+.
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 34677888887777433 356666666543 2468999999874 79999876332 566777889999999999
Q ss_pred HHHHCCCeeCCCCCCCEEEcCCC---cEEEEeccCcccc
Q 002580 789 YLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLT 824 (905)
Q Consensus 789 ~LH~~gIvHrDLKp~NILl~~~~---~vkL~DFG~s~~~ 824 (905)
-||.+||+|+|+++.|||++.++ .+.|+||+.+...
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999999999999999999877 8999999988653
No 495
>PF12860 PAS_7: PAS fold
Probab=98.57 E-value=2.1e-07 Score=86.85 Aligned_cols=105 Identities=21% Similarity=0.297 Sum_probs=74.6
Q ss_pred HHhhccceEEEeCCCCCCcEEEcCHHHHHHcCCChhhh-cCCCCcccC---------CCCCChHHHHHHHHHHHcCCcEE
Q 002580 198 LSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV-VGRNCRFLQ---------GAGTDPEDVAKIRETLQNGQSYC 267 (905)
Q Consensus 198 le~~~~~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEl-iG~~~~~l~---------~~~~~~~~~~~i~~~l~~g~~~~ 267 (905)
|+++++|+++.|. +|+++++|++|.+++|++.+.+ .|.++..+. ++.............+.......
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4788999999999 9999999999999999999998 788865322 11222233333333344444433
Q ss_pred EEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHHHH
Q 002580 268 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 314 (905)
Q Consensus 268 ~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~E~ 314 (905)
.+. ...||. |++++..|+. +| |+|.++.|||+++++|+
T Consensus 78 ~~~--~~~dgr--~l~~~~~~~~--~G---g~v~~~~DVT~~~~~E~ 115 (115)
T PF12860_consen 78 FEL--RLPDGR--WLEVRAQPLP--DG---GFVLTFTDVTERRRAEE 115 (115)
T ss_pred eEE--ECCCCE--EEEEEeEECC--CC---CEEEEEEeCCHHHHhcC
Confidence 333 457775 6678888884 45 47889999999998874
No 496
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.55 E-value=5.6e-07 Score=97.80 Aligned_cols=189 Identities=17% Similarity=0.214 Sum_probs=128.6
Q ss_pred ecccccccCceEEEEEEEcCCCeEEEEEEeecccccCHHHHHHHHHHHHHHHhC-CCCCcce--------EEEEEEeCCe
Q 002580 676 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPA--------LYASFQTKTH 746 (905)
Q Consensus 676 i~~~Lg~G~~g~V~~~~~~~t~~~vavK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~--------l~~~~~~~~~ 746 (905)
+...||+|+-+.+|-.-.. ...+.|++.+....... . ....|... .||-+.. +++- .....
T Consensus 15 ~gr~LgqGgea~ly~l~e~---~d~VAKIYh~Pppa~~a---q---k~a~la~~p~~p~~~~rvaWPqa~L~G~-~~~~~ 84 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV---RDQVAKIYHAPPPAAQA---Q---KVAELAATPDAPLLNYRVAWPQATLHGG-RRGKV 84 (637)
T ss_pred CCccccCCccceeeecchh---hchhheeecCCCchHHH---H---HHHHhccCCCCcchhhhhcccHHHhhCC-Cccce
Confidence 4567999999999965442 22456888765322111 1 12223332 4554322 1111 12233
Q ss_pred EEEEEeccCCCC-HHHHHh----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeeCCCCCCCEEEcCCCcEEEEeccCc
Q 002580 747 VCLITDYCPGGE-LFLLLD----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 821 (905)
Q Consensus 747 ~~lV~E~~~gg~-L~~~l~----~~~~~~l~~~~~~~i~~qil~gL~~LH~~gIvHrDLKp~NILl~~~~~vkL~DFG~s 821 (905)
+.++|..+.|.. ...++. ++....+.+.-....++.|+.+..-||..|.+-+|+.++|+|+++++.+.|.|-..-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccce
Confidence 788999987753 333332 223345678888999999999999999999999999999999999999999985432
Q ss_pred cccCCCCCCCCCcchhhhccccCCCCcccccccccccccccCCcccccccccc--------CCCCchHHHHHHHHHHHHh
Q 002580 822 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPVSDF--------AYTRMTRYNYLILVSKKFM 893 (905)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gT~~Y~APE~l~--------~~~~sDiwSlGvil~ellt 893 (905)
.+. .+......-+|.+.|.+||... .....|-|.||+++|++++
T Consensus 165 qi~----------------------------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ 216 (637)
T COG4248 165 QIN----------------------------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLF 216 (637)
T ss_pred eec----------------------------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHh
Confidence 211 1122233457899999999877 2458899999999999998
Q ss_pred C-CCCchhhh
Q 002580 894 E-FQPFPILC 902 (905)
Q Consensus 894 g-~~PF~~~~ 902 (905)
| ++||..+.
T Consensus 217 ggrHPysGI~ 226 (637)
T COG4248 217 GGRHPYSGIP 226 (637)
T ss_pred cCCCCCCccc
Confidence 8 99997653
No 497
>KOG0501 consensus K+-channel KCNQ [Inorganic ion transport and metabolism]
Probab=98.55 E-value=2.5e-07 Score=102.64 Aligned_cols=121 Identities=31% Similarity=0.634 Sum_probs=102.4
Q ss_pred HHHHHHHHhhc--c-ceEEEeCCCCCCcEEEcCHHHHHHcCCChhhhcCCCCc--ccCCCCCChHHHHHHHHHHHcCCcE
Q 002580 192 DIVKDALSTFQ--Q-TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCR--FLQGAGTDPEDVAKIRETLQNGQSY 266 (905)
Q Consensus 192 ~~l~~ile~~~--~-~i~i~D~~~~dG~I~~~N~a~~~l~Gys~eEliG~~~~--~l~~~~~~~~~~~~i~~~l~~g~~~ 266 (905)
..|+.++..+. | .+++.++.--|..|+|+|+.||++.||.+.|+..+++. +.+++..+......+++++.+.+.-
T Consensus 14 TFLENiiRRsn~~dtsFlL~NAQiVD~PiVY~NdgFcKlsGY~RAevMQKs~tc~FMyGEltdk~ti~k~~~t~eN~~~~ 93 (971)
T KOG0501|consen 14 TFLENIIRRSNNADTSFLLANAQIVDWPIVYCNDGFCKLSGYHRAEVMQKSCTCSFMYGELTDKGTIEKVRQTLENYETN 93 (971)
T ss_pred hHHHHHHhhccCCCcceeeccceeeccceEEecCcchhccCccHHHHhcccceeeeeeccccchhhHHHHHHHHHhhhhc
Confidence 44555665554 3 33333333337889999999999999999999998854 7778888889999999999999999
Q ss_pred EEEEEEEccCCCeEEEEEEeeeeecCCCCEEEEEEEEeccchhhHH
Q 002580 267 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 312 (905)
Q Consensus 267 ~~e~~~~~kdG~~~w~~~s~~pi~d~~G~v~~~v~~~~DITe~k~~ 312 (905)
+.|+..++|+-.++|+.+.+.||+++...++-|++.++|||..|+-
T Consensus 94 qfEillyKKN~TPvW~~vqiAPIrNe~d~VVLfLctFkDIT~~KQP 139 (971)
T KOG0501|consen 94 QFEILLYKKNRTPVWLLVQIAPIRNEKDKVVLFLCTFKDITALKQP 139 (971)
T ss_pred ceeeEeeecCCCceEEEEEeecccCCCceEEEEEeecccchhhcCC
Confidence 9999999999999999999999999999999999999999988764
No 498
>PF12860 PAS_7: PAS fold
Probab=98.54 E-value=2.2e-07 Score=86.66 Aligned_cols=104 Identities=23% Similarity=0.315 Sum_probs=74.1
Q ss_pred HHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhh-cCCCCCcCc---------CCCCCHHHHHHHHHHHHcCCcEE
Q 002580 481 LERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI-LGRNCRFLQ---------GPETDPATVRKIRAAIDNQTDVT 550 (905)
Q Consensus 481 ~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEl-iGk~~~~l~---------~~~~~~~~~~~~~~~l~~g~~~~ 550 (905)
+++++.||+++|. +++++++|++|.+++|++.+.+ .|.++..++ .+.....................
T Consensus 1 Ld~l~~Gv~v~D~---~~rl~~~N~~~~~l~~~~~~~~~~G~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (115)
T PF12860_consen 1 LDSLPQGVAVFDS---DGRLVFWNQRFRELFGLPPEMLRPGASFRDLLRRLAERGEFPPGDPEAWVRQRLARLRRRQPRS 77 (115)
T ss_pred CCCcCceEEEEcC---CCeEEeEcHHHHHHhCCCHHHhcCCCCHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCce
Confidence 4689999999999 6669999999999999999998 788754432 22333333444444444444443
Q ss_pred EEEEEEecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCccccccc
Q 002580 551 VQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLEPL 596 (905)
Q Consensus 551 ~e~~~~~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~~e 596 (905)
.+ ....||+ |+.++..|+ ++| |++.++.|||+++++|
T Consensus 78 ~~--~~~~dgr--~l~~~~~~~--~~G---g~v~~~~DVT~~~~~E 114 (115)
T PF12860_consen 78 FE--LRLPDGR--WLEVRAQPL--PDG---GFVLTFTDVTERRRAE 114 (115)
T ss_pred eE--EECCCCE--EEEEEeEEC--CCC---CEEEEEEeCCHHHHhc
Confidence 43 3567887 567888888 456 5778999999999964
No 499
>PRK11388 DNA-binding transcriptional regulator DhaR; Provisional
Probab=98.53 E-value=2.2e-06 Score=104.29 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=78.2
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHHHHHHHHHHHHcCCcEEEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 556 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~~~~~~~~~l~~g~~~~~e~~~~ 556 (905)
+..+++++.++|+++|. +|+|+++|+++++++|++.++++|++...+++.. ..+..++..+..+.......
T Consensus 205 ~~~il~~~~~gVl~vD~---~G~I~~~N~aa~~llg~s~~~l~G~~i~~l~~~~------~~l~~vl~~~~~~~~~~~~l 275 (638)
T PRK11388 205 LNALLESMDDGVIAWDE---QGNLQFLNAQAARLLRLDATASQGRAITELLTLP------AVLQQAIKQAHPLKHVEVTF 275 (638)
T ss_pred HHHHHhccCCcEEEECC---CCeEehhhHHHHHHhCcCHHHHCCCcHHHHhccc------hHHHHHHhcCCceeeEEEEE
Confidence 56688999999999999 5669999999999999999999999976665321 12344556666544333333
Q ss_pred ecCCcEEEEEEEEeeeecCCCCEEEEEEEeecCccccc
Q 002580 557 TKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 594 (905)
Q Consensus 557 ~kdG~~~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~ 594 (905)
..+|..+++.++..|+.+..| .+++.+.+|++..++
T Consensus 276 ~~~g~~~~~~v~~~Pi~~~~g--~~~v~~l~~~~~~~~ 311 (638)
T PRK11388 276 ESQGQFIDAVITLKPIIEGQG--TSFILLLHPVEQMRQ 311 (638)
T ss_pred ecCCceEEEEEEEEeecccCc--eEEEEEehhhHHHHH
Confidence 456777889999999975445 346666788877544
No 500
>COG2202 AtoS FOG: PAS/PAC domain [Signal transduction mechanisms]
Probab=98.46 E-value=1.2e-05 Score=79.19 Aligned_cols=114 Identities=28% Similarity=0.372 Sum_probs=86.8
Q ss_pred HHHHHHhhcccEEEEcCCCCCCCeEeeCHHHHHHcCCChhhhcCCCCCcCcCCCCCHH--HHHHHHHHHHcCCcEEEEEE
Q 002580 477 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPA--TVRKIRAAIDNQTDVTVQLI 554 (905)
Q Consensus 477 l~~i~e~~~~~i~i~D~~g~dg~I~~vN~a~~~l~Gys~eEliGk~~~~l~~~~~~~~--~~~~~~~~l~~g~~~~~e~~ 554 (905)
++.++++.+++++++|. ++.++++|+++++++||+..+.++.....+........ .................+..
T Consensus 114 ~~~~~~~~~~~~~~~d~---~~~~~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (232)
T COG2202 114 LRALLEASPDGIWVLDE---DGRILYANPAAEELLGYSPEEELGRGLSDLIHPEDEERRELELARALAEGRGGPLEIEYR 190 (232)
T ss_pred HHHHHhhCCceEEEEeC---CCCEEEeCHHHHHHhCCChHHhcCCChhheEecCCCchhhHHHHHHhhccCCCCcceEEE
Confidence 67889999999999999 55699999999999999988888877555443333221 11122222333445778888
Q ss_pred EEecCCcE-EEEEEEEeeeecCCCCEEEEEEEeecCccccc
Q 002580 555 NYTKSGKK-FWNLFHLQPMRDQKGEVQYFIGVQLDGSEHLE 594 (905)
Q Consensus 555 ~~~kdG~~-~wv~~~~~pi~d~~G~i~~~i~i~~DITerk~ 594 (905)
...++|.. .|+.....+..+ .|.+..+.+...|+|++++
T Consensus 191 ~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~ 230 (232)
T COG2202 191 VRRKDGERVRWILSRISPVRD-DGEIVGVVGIARDITERKQ 230 (232)
T ss_pred EEecCCCEEEEEEeeeeEecC-CCceEEEEEEEechHHHhh
Confidence 99999996 888888877765 7899999999999999887
Done!