BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002581
(905 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/336 (30%), Positives = 149/336 (44%), Gaps = 32/336 (9%)
Query: 5 DAPAVRLWNISGNPCSGSALNATDSAFESPDNNPAIVCDCTFDNGATCHITKLRVYALNK 64
D A++ +ISGN SG D + AI +TC KL + N+
Sbjct: 218 DCSALQHLDISGNKLSG-------------DFSRAI---------STCTELKLLNISSNQ 255
Query: 65 -KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSLAHNVFSGPVPRXXXX 122
G IP + L+ L +L + N FTG +P F+ G LT L L+ N F G VP
Sbjct: 256 FVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGS 313
Query: 123 XXXXXXXXXXXXXXXXXXPPE-IGNLAKLEELYIDSCGASGEIPSTFAKLH-NMQILRAS 180
P + + + L+ L + SGE+P + L ++ L S
Sbjct: 314 CSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 373
Query: 181 DAHFTGKI-PDFIGN-WTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLD 238
+F+G I P+ N L L LQ N F G IP +S Y +
Sbjct: 374 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Query: 239 FVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLF 298
+ SL L+DL L ++ G IP + ++ L+TL L FN+LTG+IP L N +LN++
Sbjct: 434 SLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWIS 493
Query: 299 LGNNSLSGTLP--TQKSENLQNIDLSYNHLSGPFPS 332
L NN L+G +P + ENL + LS N SG P+
Sbjct: 494 LSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 529
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 60/279 (21%)
Query: 63 NKKGVIP-EELVTLQYLTFLKIDRNFFTGPLPSFIGNLS-RLTLLSLAHNVFSGPVPRXX 120
N G +P + L+ ++ L L + N F+G LP + NLS L L L+ N FSGP+
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---- 381
Query: 121 XXXXXXXXXXXXXXXXXXXXPPEIGNLAK-----LEELYIDSCGASGEIPSTFAKLHNMQ 175
+ NL + L+ELY+ + G +G+IP T + +
Sbjct: 382 -----------------------LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 418
Query: 176 ILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSS 235
L S + +G IP +G+ +KL L+L N +G IP
Sbjct: 419 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE-------------------- 458
Query: 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLN 295
+M +K L+ L L +TG IPSG+ NL + LS N LTG+IP+ + +++L
Sbjct: 459 ----LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 514
Query: 296 YLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFPS 332
L L NNS SG +P + + +L +DL+ N +G P+
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 553
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 127/296 (42%), Gaps = 15/296 (5%)
Query: 49 GATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLA 108
G + L + G + T L L I N F GP+P L L LSLA
Sbjct: 217 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLA 274
Query: 109 HNVFSGPVPRXXXXXXXXXXXXXXXXXX-XXXXPPEIGNLAKLEELYIDSCGASGEIP-S 166
N F+G +P PP G+ + LE L + S SGE+P
Sbjct: 275 ENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 334
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWT-KLTALRLQGNSFQGPIPXXXXXXXXXXXX 225
T K+ +++L S F+G++P+ + N + L L L N+F GPI
Sbjct: 335 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---LPNLCQNPKN 391
Query: 226 RISDIY-----FVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNL 280
+ ++Y F + + L L L ++GTIPS +G L L+ L L N L
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 451
Query: 281 TGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFPSWV 334
G+IP+ L + +L L L N L+G +P+ S NL I LS N L+G P W+
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 507
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 134/310 (43%), Gaps = 27/310 (8%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXXXXX 125
G IP L L L + N+ +G +PS +G+LS+L L L N+ G +P+
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 464
Query: 126 XXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT 185
P + N L + + + +GEIP +L N+ IL+ S+ F+
Sbjct: 465 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 524
Query: 186 GKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRI---------------SDI 230
G IP +G+ L L L N F G IP +
Sbjct: 525 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 584
Query: 231 YFVSSSLDFV-MSLKNLKDLSLRNAL-ITGTIPSG-----IGELQNLQTLDLSFNNLTGQ 283
+ + L+F + + L LS RN IT + G ++ LD+S+N L+G
Sbjct: 585 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 644
Query: 284 IPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFP---SWVTSSL 338
IP+ + ++ L L LG+N +SG++P + + L +DLS N L G P S +T
Sbjct: 645 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 704
Query: 339 QMNLAVNNFT 348
+++L+ NN +
Sbjct: 705 EIDLSNNNLS 714
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 49 GATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLA 108
G+ + L+++ +G IP+EL+ ++ L L +D N TG +PS + N + L +SL+
Sbjct: 436 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 495
Query: 109 HNVFSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTF 168
+N +G +P+ P E+G+ L L +++ +G IP+
Sbjct: 496 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Query: 169 AKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGN--SFQGPIPXXXXXXXXXXXXR 226
K Q + + GK +I N GN FQG
Sbjct: 556 FK----QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 611
Query: 227 I-SDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
I S +Y +S F + ++ L + +++G IP IG + L L+L N+++G IP
Sbjct: 612 ITSRVYGGHTSPTFDNN-GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 286 RTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFP 331
+ ++ LN L L +N L G +P S L IDLS N+LSGP P
Sbjct: 671 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 29/224 (12%)
Query: 142 PEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHF----------------- 184
P +G+ + L+ L I SG+ + +++L S F
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSL 273
Query: 185 -----TGKIPDFI-GNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSS-SL 237
TG+IPDF+ G LT L L GN F G +P +S F +
Sbjct: 274 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Query: 238 DFVMSLKNLKDLSLRNALITGTIPSGIGELQ-NLQTLDLSFNNLTGQIPRTLFN--IDSL 294
D ++ ++ LK L L +G +P + L +L TLDLS NN +G I L ++L
Sbjct: 334 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 295 NYLFLGNNSLSGTLPTQKS--ENLQNIDLSYNHLSGPFPSWVTS 336
L+L NN +G +P S L ++ LS+N+LSG PS + S
Sbjct: 394 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS 437
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 52 CHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNV 111
C+IT RVY G + FL + N +G +P IG++ L +L+L HN
Sbjct: 610 CNITS-RVYG----GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 664
Query: 112 FSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKL 171
SG +P E+G+L L L + S G IP + L
Sbjct: 665 ISGSIPD------------------------EVGDLRGLNILDLSSNKLDGRIPQAMSAL 700
Query: 172 HNMQILRASDAHFTGKIPDF 191
+ + S+ + +G IP+
Sbjct: 701 TMLTEIDLSNNNLSGPIPEM 720
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 264 IGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSY 323
+G+ LQ LD+S N L+G R + L L + +N G +P ++LQ + L+
Sbjct: 216 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 275
Query: 324 NHLSGPFPSWVTSSLQ----MNLAVNNF 347
N +G P +++ + ++L+ N+F
Sbjct: 276 NKFTGEIPDFLSGACDTLTGLDLSGNHF 303
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 31/158 (19%)
Query: 180 SDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFV---SSS 236
S++H G + F + LT+L L NS GP+ S + F+ S++
Sbjct: 82 SNSHINGSVSGFKCS-ASLTSLDLSRNSLSGPV------TTLTSLGSCSGLKFLNVSSNT 134
Query: 237 LDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ--IPRTLFN-IDS 293
LDF G + G+ +L +L+ LDLS N+++G + L +
Sbjct: 135 LDF-----------------PGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGE 176
Query: 294 LNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFP 331
L +L + N +SG + + NL+ +D+S N+ S P
Sbjct: 177 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP 214
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 134/291 (46%), Gaps = 10/291 (3%)
Query: 50 ATCHITKLRVYALNK-KGVIPEELVTLQYLTFLKIDRNFFTGPLPSFI-GNLSRLTLLSL 107
+TC KL + N+ G IP + L+ L +L + N FTG +P F+ G LT L L
Sbjct: 244 STCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDL 301
Query: 108 AHNVFSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPE-IGNLAKLEELYIDSCGASGEIPS 166
+ N F G VP P + + + L+ L + SGE+P
Sbjct: 302 SGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE 361
Query: 167 TFAKLH-NMQILRASDAHFTGKI-PDFIGN-WTKLTALRLQGNSFQGPIPXXXXXXXXXX 223
+ L ++ L S +F+G I P+ N L L LQ N F G IP
Sbjct: 362 SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421
Query: 224 XXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ 283
+S Y + + SL L+DL L ++ G IP + ++ L+TL L FN+LTG+
Sbjct: 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGE 481
Query: 284 IPRTLFNIDSLNYLFLGNNSLSGTLP--TQKSENLQNIDLSYNHLSGPFPS 332
IP L N +LN++ L NN L+G +P + ENL + LS N SG P+
Sbjct: 482 IPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 60/279 (21%)
Query: 63 NKKGVIP-EELVTLQYLTFLKIDRNFFTGPLPSFIGNLS-RLTLLSLAHNVFSGPVPRXX 120
N G +P + L+ ++ L L + N F+G LP + NLS L L L+ N FSGP+
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---- 384
Query: 121 XXXXXXXXXXXXXXXXXXXXPPEIGNLAK-----LEELYIDSCGASGEIPSTFAKLHNMQ 175
+ NL + L+ELY+ + G +G+IP T + +
Sbjct: 385 -----------------------LPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421
Query: 176 ILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSS 235
L S + +G IP +G+ +KL L+L N +G IP
Sbjct: 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQE-------------------- 461
Query: 236 SLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLN 295
+M +K L+ L L +TG IPSG+ NL + LS N LTG+IP+ + +++L
Sbjct: 462 ----LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 296 YLFLGNNSLSGTLPTQ--KSENLQNIDLSYNHLSGPFPS 332
L L NNS SG +P + +L +DL+ N +G P+
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPA 556
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 127/296 (42%), Gaps = 15/296 (5%)
Query: 49 GATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLA 108
G + L + G + T L L I N F GP+P L L LSLA
Sbjct: 220 GDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLA 277
Query: 109 HNVFSGPVPRXXXXXXXXXXXXXXXXXX-XXXXPPEIGNLAKLEELYIDSCGASGEIP-S 166
N F+G +P PP G+ + LE L + S SGE+P
Sbjct: 278 ENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337
Query: 167 TFAKLHNMQILRASDAHFTGKIPDFIGNWT-KLTALRLQGNSFQGPIPXXXXXXXXXXXX 225
T K+ +++L S F+G++P+ + N + L L L N+F GPI
Sbjct: 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI---LPNLCQNPKN 394
Query: 226 RISDIY-----FVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNL 280
+ ++Y F + + L L L ++GTIPS +G L L+ L L N L
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 281 TGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFPSWV 334
G+IP+ L + +L L L N L+G +P+ S NL I LS N L+G P W+
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWI 510
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 134/310 (43%), Gaps = 27/310 (8%)
Query: 66 GVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNVFSGPVPRXXXXXXX 125
G IP L L L + N+ +G +PS +G+LS+L L L N+ G +P+
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKT 467
Query: 126 XXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFT 185
P + N L + + + +GEIP +L N+ IL+ S+ F+
Sbjct: 468 LETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFS 527
Query: 186 GKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRI---------------SDI 230
G IP +G+ L L L N F G IP +
Sbjct: 528 GNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 587
Query: 231 YFVSSSLDFV-MSLKNLKDLSLRNAL-ITGTIPSG-----IGELQNLQTLDLSFNNLTGQ 283
+ + L+F + + L LS RN IT + G ++ LD+S+N L+G
Sbjct: 588 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGY 647
Query: 284 IPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFP---SWVTSSL 338
IP+ + ++ L L LG+N +SG++P + + L +DLS N L G P S +T
Sbjct: 648 IPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707
Query: 339 QMNLAVNNFT 348
+++L+ NN +
Sbjct: 708 EIDLSNNNLS 717
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 10/288 (3%)
Query: 49 GATCHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLA 108
G+ + L+++ +G IP+EL+ ++ L L +D N TG +PS + N + L +SL+
Sbjct: 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLS 498
Query: 109 HNVFSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTF 168
+N +G +P+ P E+G+ L L +++ +G IP+
Sbjct: 499 NNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Query: 169 AKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGN--SFQGPIPXXXXXXXXXXXXR 226
K Q + + GK +I N GN FQG
Sbjct: 559 FK----QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 227 I-SDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
I S +Y +S F + ++ L + +++G IP IG + L L+L N+++G IP
Sbjct: 615 ITSRVYGGHTSPTFDNN-GSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 286 RTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQNIDLSYNHLSGPFP 331
+ ++ LN L L +N L G +P S L IDLS N+LSGP P
Sbjct: 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 98/224 (43%), Gaps = 29/224 (12%)
Query: 142 PEIGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHF----------------- 184
P +G+ + L+ L I SG+ + +++L S F
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSL 276
Query: 185 -----TGKIPDFI-GNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSS-SL 237
TG+IPDF+ G LT L L GN F G +P +S F +
Sbjct: 277 AENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336
Query: 238 DFVMSLKNLKDLSLRNALITGTIPSGIGELQ-NLQTLDLSFNNLTGQIPRTLFN--IDSL 294
D ++ ++ LK L L +G +P + L +L TLDLS NN +G I L ++L
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 295 NYLFLGNNSLSGTLPTQKS--ENLQNIDLSYNHLSGPFPSWVTS 336
L+L NN +G +P S L ++ LS+N+LSG PS + S
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS 440
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 29/140 (20%)
Query: 52 CHITKLRVYALNKKGVIPEELVTLQYLTFLKIDRNFFTGPLPSFIGNLSRLTLLSLAHNV 111
C+IT RVY G + FL + N +G +P IG++ L +L+L HN
Sbjct: 613 CNITS-RVYG----GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667
Query: 112 FSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYIDSCGASGEIPSTFAKL 171
SG +P E+G+L L L + S G IP + L
Sbjct: 668 ISGSIPD------------------------EVGDLRGLNILDLSSNKLDGRIPQAMSAL 703
Query: 172 HNMQILRASDAHFTGKIPDF 191
+ + S+ + +G IP+
Sbjct: 704 TMLTEIDLSNNNLSGPIPEM 723
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 264 IGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSY 323
+G+ LQ LD+S N L+G R + L L + +N G +P ++LQ + L+
Sbjct: 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 278
Query: 324 NHLSGPFPSWVTSSLQ----MNLAVNNF 347
N +G P +++ + ++L+ N+F
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHF 306
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 31/158 (19%)
Query: 180 SDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFV---SSS 236
S++H G + F + LT+L L NS GP+ S + F+ S++
Sbjct: 85 SNSHINGSVSGFKCS-ASLTSLDLSRNSLSGPV------TTLTSLGSCSGLKFLNVSSNT 137
Query: 237 LDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQ--IPRTLFN-IDS 293
LDF G + G+ +L +L+ LDLS N+++G + L +
Sbjct: 138 LDF-----------------PGKVSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGE 179
Query: 294 LNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGPFP 331
L +L + N +SG + + NL+ +D+S N+ S P
Sbjct: 180 LKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIP 217
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNS--LDTEKIYLLEWAWNLHENN 777
G++APEY G +EK DVF +GV+ LE+I+G+ D + + + + LL+W L +
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 778 QSLGLVDPTLT-EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826
+ LVD L + D+E ++I VALLCTQ+SPM RP MS VV ML GD
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/117 (44%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 612 RRKKDND---------DEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKG 662
RRKK D D EV +G + FS EL+ A+ +F N LG GG+G VYKG
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLG---QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG 57
Query: 663 TLSDGRVIAVKQLSIASHQGKN-QFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
L+DG ++AVK+L QG QF E+ IS HRNL+RL G C+ RLLVY
Sbjct: 58 RLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 114
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 3/110 (2%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNS--LDTEKIYLLEWAWNLHENN 777
G++APEY G +EK DVF +GV+ LE+I+G+ D + + + + LL+W L +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 778 QSLGLVDPTLT-EFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGD 826
+ LVD L + D+E ++I VALLCTQ+SPM RP MS VV ML GD
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 617 NDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLS 676
+D EV +G + FS EL+ A+ +F N LG GG+G VYKG L+DG ++AVK+L
Sbjct: 7 EEDPEVHLG---QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLK 63
Query: 677 IASHQGKN-QFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
QG QF E+ IS HRNL+RL G C+ RLLVY
Sbjct: 64 EERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 106
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 106/256 (41%), Gaps = 17/256 (6%)
Query: 39 AIVCDCTFDNGATCHITKLRVYALN--KKGVIPEELVTLQYLTFLKIDR-NFFTGPLPSF 95
++CD + T + L + LN K IP L L YL FL I N GP+P
Sbjct: 40 GVLCD---TDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPA 96
Query: 96 IGNLSRLTLLSLAHNVFSGPVPRXXXXXXXXXXXXXXXXXXXXXXPPEIGNLAKLEELYI 155
I L++L L + H SG +P PP I +L L +
Sbjct: 97 IAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156
Query: 156 DSCGASGEIPSTFAKLHNM-QILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPX 214
D SG IP ++ + + S TGKIP N L + L N +G
Sbjct: 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEG---- 211
Query: 215 XXXXXXXXXXXRISDIYFVSSSLDF----VMSLKNLKDLSLRNALITGTIPSGIGELQNL 270
I+ +SL F V KNL L LRN I GT+P G+ +L+ L
Sbjct: 212 -DASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270
Query: 271 QTLDLSFNNLTGQIPR 286
+L++SFNNL G+IP+
Sbjct: 271 HSLNVSFNNLCGEIPQ 286
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 102/279 (36%), Gaps = 72/279 (25%)
Query: 141 PPEIGNLAKLEELYIDSCG-ASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLT 199
P + NL L LYI G IP AKL + L + + +G IPDF+ L
Sbjct: 69 PSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128
Query: 200 ALRLQGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGT 259
L N+ G +P + SL NL ++ I+G
Sbjct: 129 TLDFSYNALSGTLPPS------------------------ISSLPNLVGITFDGNRISGA 164
Query: 260 IPSGIGELQNLQT-LDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLP--------T 310
IP G L T + +S N LTG+IP T N++ L ++ L N L G T
Sbjct: 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNT 223
Query: 311 QK-----------------SENLQNIDLSYNHLSGPFPSWVTSSL---QMNLAVNNFTFD 350
QK S+NL +DL N + G P +T +N++ NN +
Sbjct: 224 QKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGE 283
Query: 351 ---GSNISVFPGLQCLQRNFPCNRNAPRYANFSIKCGGP 386
G N+ F + YAN CG P
Sbjct: 284 IPQGGNLQRF--------------DVSAYANNKCLCGSP 308
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 260 IPSGIGELQNLQTLDLS-FNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NL 316
IPS + L L L + NNL G IP + + L+YL++ + ++SG +P S+ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 317 QNIDLSYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNIS 355
+D SYN LSG P ++S NL TFDG+ IS
Sbjct: 128 VTLDFSYNALSGTLPPSISS--LPNLV--GITFDGNRIS 162
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 28/148 (18%)
Query: 188 IPDFIGNWTKLTALRLQG-NSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNL 246
IP + N L L + G N+ GPIP + L L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPA------------------------IAKLTQL 103
Query: 247 KDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG 306
L + + ++G IP + +++ L TLD S+N L+G +P ++ ++ +L + N +SG
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG 163
Query: 307 TLPTQK---SENLQNIDLSYNHLSGPFP 331
+P S+ ++ +S N L+G P
Sbjct: 164 AIPDSYGSFSKLFTSMTISRNRLTGKIP 191
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
GY+ PEY ++G LTEK+DV+SFGVV EV+ R+ SL E + L EWA H N Q
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 780 LGLVDPTLTEFNDKEALRVIG-VALLCTQASPMMRPPMSRVVAML 823
+VDP L + E+LR G A+ C S RP M V+ L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA 695
+L AT +FD +G G +G VYKG L DG +A+K+ + S QG +F EI T+S
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 696 VQHRNLVRLYGCCIEGARRLLVY 718
+H +LV L G C E +L+Y
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIY 114
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQS 779
GY+ PEY ++G LTEK+DV+SFGVV EV+ R+ SL E + L EWA H N Q
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 780 LGLVDPTLTEFNDKEALRVIG-VALLCTQASPMMRPPMSRVVAML 823
+VDP L + E+LR G A+ C S RP M V+ L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA 695
+L AT +FD +G G +G VYKG L DG +A+K+ + S QG +F EI T+S
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 696 VQHRNLVRLYGCCIEGARRLLVY 718
+H +LV L G C E +L+Y
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIY 114
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 11/102 (10%)
Query: 627 ESKPNTFSYAELRSATKDFDP------SNKLGEGGYGPVYKGTLSDGRVIAVKQLS---- 676
+++ ++FS+ EL++ T +FD NK+GEGG+G VYKG +++ +AVK+L+
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 67
Query: 677 IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
I + + K QF EI ++ QH NLV L G +G LVY
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 714 RLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773
R++ Y+APE A+RG +T K+D++SFGVV LE+I+G D + + + L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIE 251
Query: 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
E +D + + + + VA C RP + +V +L
Sbjct: 252 DEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 11/102 (10%)
Query: 627 ESKPNTFSYAELRSATKDFDP------SNKLGEGGYGPVYKGTLSDGRVIAVKQLS---- 676
+++ ++FS+ EL++ T +FD NK+GEGG+G VYKG +++ +AVK+L+
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 67
Query: 677 IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
I + + K QF EI ++ QH NLV L G +G LVY
Sbjct: 68 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 714 RLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773
R++ Y+APE A+RG +T K+D++SFGVV LE+I+G D + + + L
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIE 251
Query: 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
E +D + + + + VA C RP + +V +L
Sbjct: 252 DEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 11/102 (10%)
Query: 627 ESKPNTFSYAELRSATKDFDP------SNKLGEGGYGPVYKGTLSDGRVIAVKQLS---- 676
+++ ++FS+ EL++ T +FD NK+GEGG+G VYKG +++ +AVK+L+
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVD 61
Query: 677 IASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
I + + K QF EI ++ QH NLV L G +G LVY
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 103
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 714 RLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773
R++ Y+APE A+RG +T K+D++SFGVV LE+I+G D + + + L
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIE 245
Query: 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
E +D + + + + VA C RP + +V +L
Sbjct: 246 DEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 11/101 (10%)
Query: 628 SKPNTFSYAELRSATKDFDP------SNKLGEGGYGPVYKGTLSDGRVIAVKQLS----I 677
++ ++FS+ EL++ T +FD NK GEGG+G VYKG +++ +AVK+L+ I
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDI 59
Query: 678 ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVY 718
+ + K QF EI + QH NLV L G +G LVY
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVY 100
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 714 RLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNL 773
R++ Y APE A+RG +T K+D++SFGVV LE+I+G D + + + L
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIE 242
Query: 774 HENNQSLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAML 823
E +D + + VA C RP + +V +L
Sbjct: 243 DEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 626 IESKPNTFSYAELRS-ATKDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIA 678
I P FS A + +D +LGEG +G V+ D ++AVK L A
Sbjct: 23 IIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA 82
Query: 679 SHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
S + F E ++ +QH+++VR +G C EG L+V++
Sbjct: 83 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFE 123
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIASHQGKNQFVNEIATISAV 696
+D +LGEG +G V+ D ++AVK L AS + F E ++ +
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 77
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
QH+++VR +G C EG L+V++
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFE 100
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 12/89 (13%)
Query: 650 KLGEGGYGPVYKGTL------SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LGEG +G V+ D ++AVK L AS + F E ++ +QH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+G C EG L+V+ EY G L
Sbjct: 79 FFGVCTEGRPLLMVF------EYMRHGDL 101
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 648 SNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNL 701
+LGEG +G V+ D ++AVK L AS + F E ++ +QH ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 702 VRLYGCCIEGARRLLVYD 719
V+ YG C+EG ++V++
Sbjct: 78 VKFYGVCVEGDPLIMVFE 95
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 626 IESKPNTFSYAELRSATKDFDPSN----------KLGEGGYGPVYKGT---LSD--GRVI 670
I + N + + SA +D DP+ +LG+G +G V L D G V+
Sbjct: 14 IPTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVV 73
Query: 671 AVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRG 730
AVK+L ++ + F EI + ++QH N+V+ G C RR L P ++R
Sbjct: 74 AVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRD 133
Query: 731 HLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWN--LHENNQSLGLVDPTLT 788
+L + + + L+ S L T++ + A L EN + + D LT
Sbjct: 134 YLQKHKERIDH-IKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
Query: 789 EF--NDKEALRV 798
+ DKE +V
Sbjct: 193 KVLPQDKEXXKV 204
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 627 ESKPNTFSYAELRSATK-DFDPSN---------KLGEGGYGPVYKGTL-SDGRVIAVKQL 675
+ +P S+ + R+A + DP + K+GEG G V T+ S G+++AVK++
Sbjct: 3 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM 62
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711
+ Q + NE+ + QH N+V +Y + G
Sbjct: 63 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 98
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 627 ESKPNTFSYAELRSATK-DFDPSN---------KLGEGGYGPVYKGTL-SDGRVIAVKQL 675
+ +P S+ + R+A + DP + K+GEG G V T+ S G+++AVK++
Sbjct: 5 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM 64
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711
+ Q + NE+ + QH N+V +Y + G
Sbjct: 65 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 100
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 640 SATKDFDPSNKLGEGGYGPVYKG-TLSDGRVIAVKQLSIASHQGK-NQFVNEIATISAVQ 697
S++ F KLG G Y VYKG + G +A+K++ + S +G + + EI+ + ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+VRLY + LV++
Sbjct: 62 HENIVRLYDVIHTENKLTLVFE 83
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 627 ESKPNTFSYAELRSATK-DFDPSN---------KLGEGGYGPVYKGTL-SDGRVIAVKQL 675
+ +P S+ + R+A + DP + K+GEG G V T+ S G+++AVK++
Sbjct: 48 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM 107
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711
+ Q + NE+ + QH N+V +Y + G
Sbjct: 108 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 143
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 11/96 (11%)
Query: 627 ESKPNTFSYAELRSATK-DFDPSN---------KLGEGGYGPVYKGTL-SDGRVIAVKQL 675
+ +P S+ + R+A + DP + K+GEG G V T+ S G+++AVK++
Sbjct: 125 QREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKM 184
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEG 711
+ Q + NE+ + QH N+V +Y + G
Sbjct: 185 DLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 220
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGK-------NQFVNEIAT 692
A + + ++G+GG+G V+KG L D V+A+K L + +G+ +F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 693 ISAVQHRNLVRLYGCCIEGARRLLVY 718
+S + H N+V+LYG R ++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF 102
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGK-------NQFVNEIAT 692
A + + ++G+GG+G V+KG L D V+A+K L + +G+ +F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 693 ISAVQHRNLVRLYGCCIEGARRLLVY 718
+S + H N+V+LYG R ++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF 102
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 641 ATKDFDPSN----------KLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQ 685
A +D DP+ +LG+G +G V L D G V+AVK+L ++ +
Sbjct: 1 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVA 745
F EI + ++QH N+V+ G C RR L P ++R +L A+ +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDH-IKL 119
Query: 746 LEVISGRANSDNSLDTEKIYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
L+ S L T++ + A L EN + + D LT+ DKE +V
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGK-------NQFVNEIAT 692
A + + ++G+GG+G V+KG L D V+A+K L + +G+ +F E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 693 ISAVQHRNLVRLYGCCIEGARRLLVY 718
+S + H N+V+LYG R ++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF 102
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 641 ATKDFDPSN----------KLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQ 685
A +D DP+ +LG+G +G V L D G V+AVK+L ++ +
Sbjct: 1 AFEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 60
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVA 745
F EI + ++QH N+V+ G C RR L P ++R +L + + +
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDH-IKL 119
Query: 746 LEVISGRANSDNSLDTEKIYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
L+ S L T++ + A L EN + + D LT+ DKE +V
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 134
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 630 PNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVN 688
P++ +Y + D +KLG G YG VY+G + +AVK L + + + +F+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 63
Query: 689 EIATISAVQHRNLVRLYGCC 708
E A + ++H NLV+L G C
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC 83
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 630 PNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVN 688
P++ +Y + D +KLG G YG VY+G + +AVK L + + + +F+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 63
Query: 689 EIATISAVQHRNLVRLYGCC 708
E A + ++H NLV+L G C
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC 83
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 641 ATKDFDPSN----------KLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQ 685
A +D DP+ +LG+G +G V L D G V+AVK+L ++ +
Sbjct: 4 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 63
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVA 745
F EI + ++QH N+V+ G C RR L P ++R +L + + +
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKL 122
Query: 746 LEVISGRANSDNSLDTEKIYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
L+ S L T++ + A L EN + + D LT+ DKE +V
Sbjct: 123 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 179
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 641 ATKDFDPSN----------KLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQ 685
A +D DP+ +LG+G +G V L D G V+AVK+L ++ +
Sbjct: 5 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 64
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVA 745
F EI + ++QH N+V+ G C RR L P ++R +L + + +
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKL 123
Query: 746 LEVISGRANSDNSLDTEKIYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
L+ S L T++ + A L EN + + D LT+ DKE +V
Sbjct: 124 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 641 ATKDFDPSN----------KLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQ 685
A +D DP+ +LG+G +G V L D G V+AVK+L ++ +
Sbjct: 2 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 61
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVA 745
F EI + ++QH N+V+ G C RR L P ++R +L + + +
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKL 120
Query: 746 LEVISGRANSDNSLDTEKIYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
L+ S L T++ + A L EN + + D LT+ DKE +V
Sbjct: 121 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 630 PNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVN 688
P++ +Y + D +KLG G YG VY+G + +AVK L + + + +F+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 63
Query: 689 EIATISAVQHRNLVRLYGCC 708
E A + ++H NLV+L G C
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC 83
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 132
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 134
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 20/177 (11%)
Query: 641 ATKDFDPSN----------KLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQ 685
A +D DP+ +LG+G +G V L D G V+AVK+L ++ +
Sbjct: 3 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD 62
Query: 686 FVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVA 745
F EI + ++QH N+V+ G C RR L P ++R +L + + +
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKL 121
Query: 746 LEVISGRANSDNSLDTEKIYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
L+ S L T++ + A L EN + + D LT+ DKE +V
Sbjct: 122 LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 630 PNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVN 688
P++ +Y + D +KLG G YG VY+G + +AVK L + + + +F+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 63
Query: 689 EIATISAVQHRNLVRLYGCC 708
E A + ++H NLV+L G C
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC 83
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 133
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 137
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 134
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 152
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 630 PNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVN 688
P++ +Y + D +KLG G YG VY+G + +AVK L + + + +F+
Sbjct: 5 PSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 63
Query: 689 EIATISAVQHRNLVRLYGCC 708
E A + ++H NLV+L G C
Sbjct: 64 EAAVMKEIKHPNLVQLLGVC 83
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEK 763
G C RR L P ++R +L + + + L+ S L T++
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDH-IKLLQYTSQICKGMEYLGTKR 152
Query: 764 IYLLEWAWN--LHENNQSLGLVDPTLTEF--NDKEALRV 798
+ A L EN + + D LT+ DKE +V
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 191
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 649 NKLGEGGYGPVYKGT---LSD--GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+LG+G +G V L D G V+AVK+L ++ + F EI + ++QH N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
G C RR L P ++R +L + +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE 110
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS--DGRVI--AVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVV---ALEVISG 751
+ HRNL+RLYG + +++ LAP ++ L + F G + A++V G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT---ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS--DGRVI--AVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVV---ALEVISG 751
+ HRNL+RLYG + +++ LAP ++ L + F G + A++V G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT---ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 650 KLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
K+GEG G V T+ S G+++AVK++ + Q + NE+ + QH N+V +Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 709 IEG 711
+ G
Sbjct: 87 LVG 89
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS--DGRVI--AVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVV---ALEVISG 751
+ HRNL+RLYG + +++ LAP ++ L + F G + A++V G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT---ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS--DGRVI--AVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVV---ALEVISG 751
+ HRNL+RLYG + +++ LAP ++ L + F G + A++V G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT---ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS--DGRVI--AVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVV---ALEVISG 751
+ HRNL+RLYG + +++ LAP ++ L + F G + A++V G
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT---ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 133
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 650 KLGEGGYGPVYKGTL-SDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
K+GEG G V T+ S G+++AVK++ + Q + NE+ + QH N+V +Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 709 IEG 711
+ G
Sbjct: 91 LVG 93
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS--DGRVI--AVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVV---ALEVISG 751
+ HRNL+RLYG + +++ LAP ++ L + F G + A++V G
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT---ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 123
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS--DGRVI--AVKQLS---IASHQGKNQFVNEIATISA 695
KD KLG+G +G V +G G+ + AVK L ++ + + F+ E+ + +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVV---ALEVISG 751
+ HRNL+RLYG + +++ LAP ++ L + F G + A++V G
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT---ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEG 127
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 645 FDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
FD KLGEG YG VYK + G+++A+KQ+ + S + + EI+ + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
YG + D ++ EY G +++
Sbjct: 89 YYGSYFKNT------DLWIVMEYCGAGSVSD 113
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHRNLVRLYGC 707
K+GEG YG VYK + G A+K++ + + + EI+ + ++H N+V+LY
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 708 CIEGARRLLVYD 719
R +LV++
Sbjct: 69 IHTKKRLVLVFE 80
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 63 MKEIKHPNLVQLLGVC 78
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHRNLVRLYGC 707
K+GEG YG VYK + G A+K++ + + + EI+ + ++H N+V+LY
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 708 CIEGARRLLVYD 719
R +LV++
Sbjct: 69 IHTKKRLVLVFE 80
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 63 MKEIKHPNLVQLLGVC 78
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 67 MKEIKHPNLVQLLGVC 82
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 64 MKEIKHPNLVQLLGVC 79
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 75
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 76 MKEIKHPNLVQLLGVC 91
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 64 MKEIKHPNLVQLLGVC 79
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 65 MKEIKHPNLVQLLGVC 80
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHRNLVRLYGC 707
K+GEG YG VYK + G A+K++ + + + EI+ + ++H N+V+LY
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 708 CIEGARRLLVYD 719
R +LV++
Sbjct: 69 IHTKKRLVLVFE 80
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATI 693
Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 694 SAVQHRNLVRLYGCC 708
++H NLV+L G C
Sbjct: 64 KEIKHPNLVQLLGVC 78
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 65 MKEIKHPNLVQLLGVC 80
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 634 SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIAT 692
+Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 693 ISAVQHRNLVRLYGCC 708
+ ++H NLV+L G C
Sbjct: 65 MKEIKHPNLVQLLGVC 80
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATI 693
Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 694 SAVQHRNLVRLYGCC 708
++H NLV+L G C
Sbjct: 64 KEIKHPNLVQLLGVC 78
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
D +KLG G YG VY+G + +AVK L + + + +F+ E A + ++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 703 RLYGCC 708
+L G C
Sbjct: 71 QLLGVC 76
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATI 693
Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 694 SAVQHRNLVRLYGCC 708
++H NLV+L G C
Sbjct: 64 KEIKHPNLVQLLGVC 78
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATI 693
Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 63
Query: 694 SAVQHRNLVRLYGCC 708
++H NLV+L G C
Sbjct: 64 KEIKHPNLVQLLGVC 78
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL------SDGRVIAVKQLSIASHQGKNQFVNEIATISAV 696
+D +LGEG +G V+ D ++AVK L + + F E ++ +
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
QH ++V+ YG C +G ++V++
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFE 97
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
D +KLG G YG VY+G + +AVK L + + + +F+ E A + ++H NLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 703 RLYGCC 708
+L G C
Sbjct: 71 QLLGVC 76
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 628 SKPNTF----SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQG 682
+KP + +Y + D +KLG G YG VY+G + +AVK L + +
Sbjct: 198 NKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 257
Query: 683 KNQFVNEIATISAVQHRNLVRLYGCC 708
+ +F+ E A + ++H NLV+L G C
Sbjct: 258 E-EFLKEAAVMKEIKHPNLVQLLGVC 282
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATI 693
Y + D +KLG G YG VY+G + +AVK L + + + +F+ E A +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVM 270
Query: 694 SAVQHRNLVRLYGCC 708
++H NLV+L G C
Sbjct: 271 KEIKHPNLVQLLGVC 285
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 628 SKPNTF----SYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQG 682
+KP + +Y + D +KLG G YG VY+G + +AVK L + +
Sbjct: 240 NKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 299
Query: 683 KNQFVNEIATISAVQHRNLVRLYGCC 708
+ +F+ E A + ++H NLV+L G C
Sbjct: 300 E-EFLKEAAVMKEIKHPNLVQLLGVC 324
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K+ + +G G +G V K + +A+KQ I S + F+ E+ +S V H N+V
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIV 64
Query: 703 RLYGCCI 709
+LYG C+
Sbjct: 65 KLYGACL 71
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDN 757
++APE + +EK DVFS+G++ EVI+ R D
Sbjct: 168 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K+ + +G G +G V K + +A+KQ I S + F+ E+ +S V H N+V
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIV 65
Query: 703 RLYGCCI 709
+LYG C+
Sbjct: 66 KLYGACL 72
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 720 GYLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDN 757
++APE + +EK DVFS+G++ EVI+ R D
Sbjct: 169 AWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 206
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSI-ASHQG-KNQFVNEIATISAVQHRNLVRL 704
K+GEG YG VYK S GR++A+K++ + A +G + + EI+ + + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSI-ASHQG-KNQFVNEIATISAVQHRNLVRL 704
K+GEG YG VYK S GR++A+K++ + A +G + + EI+ + + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSL 84
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFS 740
+H N++RLYG + R YL EYA RG + ++ S
Sbjct: 71 RHPNILRLYGYFHDATR------VYLILEYAPRGEVYKELQKLS 108
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 651 LGEGGYGPVYKGTLS--DGRV--IAVKQLSI--ASHQGKNQFVNEIATISAVQHRNLVRL 704
LGEG +G V +G L DG +AVK + + +S + +F++E A + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 705 YGCCIE 710
G CIE
Sbjct: 102 LGVCIE 107
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFS 740
+H N++RLYG + R YL EYA RG + ++ S
Sbjct: 71 RHPNILRLYGYFHDATR------VYLILEYAPRGEVYKELQKLS 108
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
D +KLG G YG VY G + +AVK L + + + +F+ E A + ++H NLV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 91
Query: 703 RLYGCC 708
+L G C
Sbjct: 92 QLLGVC 97
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRV-IAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
D +KLG G +G VY+G + +AVK L + + + +F+ E A + ++H NLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLV 70
Query: 703 RLYGCC 708
+L G C
Sbjct: 71 QLLGVC 76
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 646 DPS-----NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
DPS ++G G +G V+ G + +A+K + S ++ F+ E + + H
Sbjct: 25 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPK 83
Query: 701 LVRLYGCCIEGARRLLVYD 719
LV+LYG C+E A LV++
Sbjct: 84 LVQLYGVCLEQAPICLVFE 102
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ +PE + K+DV+SFGV+ EV S G+ +N ++E + + +
Sbjct: 190 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---------EDISTG 240
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
L P L + V + C + P RP SR++ LA E G
Sbjct: 241 FRLYKPRLA------STHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 285
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 651 LGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNE--IATISAVQHRNLVRL 704
+G G YG VYKG+L D R +AVK S A+ Q F+NE I + ++H N+ R
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARF 72
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 624 VGIESKPNT--FSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ 681
+G ++ P+T Y KD +LG G +G V G +A+K + S
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-M 61
Query: 682 GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLA 723
+++F+ E + + H LV+LYG C + R + + Y+A
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMA 102
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS + H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 99 CIGVSLQSLPRFILLE 114
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Query: 624 VGIESKPNT--FSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQ 681
+G ++ P+T Y KD +LG G +G V G +A+K + S
Sbjct: 3 LGSKNAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-M 61
Query: 682 GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLA 723
+++F+ E + + H LV+LYG C + R + + Y+A
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTK-QRPIFIITEYMA 102
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS + H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 113 CIGVSLQSLPRFILLE 128
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 144 IGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRL 203
+ NL LE L I S S S AKL N++ L A++ + P +G T L L L
Sbjct: 172 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 227
Query: 204 QGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIP-S 262
GN ++ DI ++S L NL DL L N I+ P S
Sbjct: 228 NGN-------------------QLKDIGTLAS-------LTNLTDLDLANNQISNLAPLS 261
Query: 263 GIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLS 322
G+ +L L+ L N ++ P L + +L L L N L P +NL + L
Sbjct: 262 GLTKLTELK---LGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 316
Query: 323 YNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCL 363
+N++S P + LQ NN D S+++ + L
Sbjct: 317 FNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWL 357
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQL--SIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
+GEG YG V K D GR++A+K+ S K + EI + ++H NLV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 708 CIEGARRLLVYD 719
C + R LV++
Sbjct: 93 CKKKKRWYLVFE 104
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 646 DPS-----NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
DPS ++G G +G V+ G + +A+K + + + F+ E + + H
Sbjct: 3 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPK 61
Query: 701 LVRLYGCCIEGARRLLVYD 719
LV+LYG C+E A LV++
Sbjct: 62 LVQLYGVCLEQAPICLVFE 80
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ +PE + K+DV+SFGV+ EV S G+ +N ++E + + +
Sbjct: 168 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---------EDISTG 218
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
L P L + V + C + P RP SR++ LA E G
Sbjct: 219 FRLYKPRLA------STHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 263
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 99 CIGVSLQSLPRFILLE 114
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 99 CIGVSLQSLPRFILLE 114
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 646 DPS-----NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
DPS ++G G +G V+ G + +A+K + + + F+ E + + H
Sbjct: 5 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPK 63
Query: 701 LVRLYGCCIEGARRLLVYD 719
LV+LYG C+E A LV++
Sbjct: 64 LVQLYGVCLEQAPICLVFE 82
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 16/106 (15%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ +PE + K+DV+SFGV+ EV S G+ +N ++E + + +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---------EDISTG 220
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAG 825
L P L + V + C + P RP SR++ LA
Sbjct: 221 FRLYKPRLA------STHVYQIMNHCWKERPEDRPAFSRLLRQLAA 260
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 105 CIGVSLQSLPRFILLE 120
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 115 CIGVSLQSLPRFILLE 130
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 646 DPS-----NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
DPS ++G G +G V+ G + +A+K + + + F+ E + + H
Sbjct: 5 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPK 63
Query: 701 LVRLYGCCIEGARRLLVYD 719
LV+LYG C+E A LV++
Sbjct: 64 LVQLYGVCLEQAPICLVFE 82
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ +PE + K+DV+SFGV+ EV S G+ +N ++E + + +
Sbjct: 170 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---------EDISTG 220
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
L P L + V + C + P RP SR++ LA E G
Sbjct: 221 FRLYKPRLA------STHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESG 265
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Query: 630 PNTFSYAELRSATK--DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KN 684
P + S + SAT + KLGEG YG VYK + +A+K++ + +
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 685 QFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ E++ + +QHRN++ L R L+++
Sbjct: 79 TAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFE 113
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 139 CIGVSLQSLPRFILLE 154
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 125 CIGVSLQSLPRFILLE 140
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 98 CIGVSLQSLPRFILME 113
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 646 DPS-----NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
DPS ++G G +G V+ G + +A+K + + + F+ E + + H
Sbjct: 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPK 66
Query: 701 LVRLYGCCIEGARRLLVYD 719
LV+LYG C+E A LV++
Sbjct: 67 LVQLYGVCLEQAPICLVFE 85
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ +PE + K+DV+SFGV+ EV S G+ +N ++E + + +
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---------EDISTG 223
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
L P L + V + C + P RP SR++ LA E G
Sbjct: 224 FRLYKPRLA------STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 268
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 113 CIGVSLQSLPRFILME 128
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 616 DNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQ 674
+N+ EE L SK + + A +DF+ LG+G +G VY + ++A+K
Sbjct: 10 ENNPEEELA---SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 66
Query: 675 LSIASHQG---KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
L A + ++Q E+ S ++H N++RLYG + R L+ +
Sbjct: 67 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 114
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 98 CIGVSLQSLPRFILLE 113
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 649 NKLGEGGYGPVYKGTLSD---GRV---IAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
+LG+G +G VY+G D G +AVK + AS + + +F+NE + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 702 VRLYGCCIEGARRLLVYD 719
VRL G +G L+V +
Sbjct: 83 VRLLGVVSKGQPTLVVME 100
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
KD +LG G +G V G +A+K + S +++F+ E + + H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 703 RLYGCCIEGARRLLVYDGYLA 723
+LYG C + R + + Y+A
Sbjct: 68 QLYGVCTK-QRPIFIITEYMA 87
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 616 DNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQ 674
+N+ EE L SK + + A +DF+ LG+G +G VY + ++A+K
Sbjct: 1 ENNPEEELA---SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 57
Query: 675 LSIASHQG---KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
L A + ++Q E+ S ++H N++RLYG + R L+ +
Sbjct: 58 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 105
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 144 IGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRL 203
+ NL LE L I S S S AKL N++ L A++ + P +G T L L L
Sbjct: 173 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 228
Query: 204 QGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIP-S 262
GN ++ DI ++S L NL DL L N I+ P S
Sbjct: 229 NGN-------------------QLKDIGTLAS-------LTNLTDLDLANNQISNLAPLS 262
Query: 263 GIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLS 322
G+ +L L+ L N ++ P L + +L L L N L P +NL + L
Sbjct: 263 GLTKLTELK---LGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 317
Query: 323 YNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCL 363
+N++S P + LQ NN D S+++ + L
Sbjct: 318 FNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWL 358
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 116 CIGVSLQSLPRFILLE 131
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
KD +LG G +G V G +A+K + S +++F+ E + + H LV
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 62
Query: 703 RLYGCCIEGARRLLVYDGYLA 723
+LYG C + R + + Y+A
Sbjct: 63 QLYGVCTK-QRPIFIITEYMA 82
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
KD +LG G +G V G +A+K + S +++F+ E + + H LV
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 67
Query: 703 RLYGCCIEGARRLLVYDGYLA 723
+LYG C + R + + Y+A
Sbjct: 68 QLYGVCTK-QRPIFIITEYMA 87
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 616 DNDDEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQ 674
+N+ EE L SK + + A +DF+ LG+G +G VY + ++A+K
Sbjct: 10 ENNPEEELA---SKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKV 66
Query: 675 LSIASHQG---KNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
L A + ++Q E+ S ++H N++RLYG + R L+ +
Sbjct: 67 LFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 114
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 241
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 242 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 289
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 649 NKLGEGGYGPVYKGTLSD---GRV---IAVKQLS-IASHQGKNQFVNEIATISAVQHRNL 701
+LG+G +G VY+G D G +AVK ++ AS + + +F+NE + + ++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 81
Query: 702 VRLYGCCIEGARRLLVYD 719
VRL G +G L+V +
Sbjct: 82 VRLLGVVSKGQPTLVVME 99
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 239
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 240 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 287
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 649 NKLGEGGYGPVYKGTLSD---GRV---IAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
+LG+G +G VY+G D G +AVK + AS + + +F+NE + + ++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 79
Query: 702 VRLYGCCIEGARRLLVYD 719
VRL G +G L+V +
Sbjct: 80 VRLLGVVSKGQPTLVVME 97
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 649 NKLGEGGYGPVYKGTLSD---GRV---IAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
+LG+G +G VY+G D G +AVK + AS + + +F+NE + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 702 VRLYGCCIEGARRLLVYD 719
VRL G +G L+V +
Sbjct: 83 VRLLGVVSKGQPTLVVME 100
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
KD +LG G +G V G +A+K + S +++F+ E + + H LV
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 73
Query: 703 RLYGCCIEGARRLLVYDGYLA 723
+LYG C + R + + Y+A
Sbjct: 74 QLYGVCTK-QRPIFIITEYMA 93
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 649 NKLGEGGYGPVYKGTLSD---GRV---IAVKQL-SIASHQGKNQFVNEIATISAVQHRNL 701
+LG+G +G VY+G D G +AVK + AS + + +F+NE + + ++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHV 82
Query: 702 VRLYGCCIEGARRLLVYD 719
VRL G +G L+V +
Sbjct: 83 VRLLGVVSKGQPTLVVME 100
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 90 CIGVSLQSLPRFILLE 105
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 144 IGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRL 203
+ NL LE L I S S S AKL N++ L A++ + P +G T L L L
Sbjct: 168 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 223
Query: 204 QGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIP-S 262
GN ++ DI ++S L NL DL L N I+ P S
Sbjct: 224 NGN-------------------QLKDIGTLAS-------LTNLTDLDLANNQISNLAPLS 257
Query: 263 GIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLS 322
G+ +L L+ L N ++ P L + +L L L N L P +NL + L
Sbjct: 258 GLTKLTELK---LGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 312
Query: 323 YNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCL 363
+N++S P + LQ NN D S+++ + L
Sbjct: 313 FNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWL 353
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 144 IGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRL 203
+ NL LE L I S S S AKL N++ L A++ + P +G T L L L
Sbjct: 169 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 204 QGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIP-S 262
GN ++ DI ++S L NL DL L N I+ P S
Sbjct: 225 NGN-------------------QLKDIGTLAS-------LTNLTDLDLANNQISNLAPLS 258
Query: 263 GIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLS 322
G+ +L L+ L N ++ P L + +L L L N L P +NL + L
Sbjct: 259 GLTKLTELK---LGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 313
Query: 323 YNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCL 363
+N++S P + LQ NN D S+++ + L
Sbjct: 314 FNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWL 354
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 91/221 (41%), Gaps = 36/221 (16%)
Query: 144 IGNLAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRL 203
+ NL LE L I S S S AKL N++ L A++ + P +G T L L L
Sbjct: 169 LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSL 224
Query: 204 QGNSFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIP-S 262
GN ++ DI ++S L NL DL L N I+ P S
Sbjct: 225 NGN-------------------QLKDIGTLAS-------LTNLTDLDLANNQISNLAPLS 258
Query: 263 GIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLS 322
G+ +L L+ L N ++ P L + +L L L N L P +NL + L
Sbjct: 259 GLTKLTELK---LGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLY 313
Query: 323 YNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGLQCL 363
+N++S P + LQ NN D S+++ + L
Sbjct: 314 FNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWL 354
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 243
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 244 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 650 KLGEGGYGPVYKGTLSD---GRV---IAVKQLS-IASHQGKNQFVNEIATISAVQHRNLV 702
+LG+G +G VY+G D G +AVK ++ AS + + +F+NE + + ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 703 RLYGCCIEGARRLLVYD 719
RL G +G L+V +
Sbjct: 85 RLLGVVSKGQPTLVVME 101
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 650 KLGEGGYGPVYKGTLSD---GRV---IAVKQLS-IASHQGKNQFVNEIATISAVQHRNLV 702
+LG+G +G VY+G D G +AVK ++ AS + + +F+NE + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 703 RLYGCCIEGARRLLVYD 719
RL G +G L+V +
Sbjct: 84 RLLGVVSKGQPTLVVME 100
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIA 691
A+ + A +DF+ LG+G +G VY + + ++A+K L A + ++Q E+
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 692 TISAVQHRNLVRLYGCCIEGARRLLVYD 719
S ++H N++RLYG + R L+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILE 88
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 636 AELRSATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIA 691
A+ + A +DF+ LG+G +G VY + ++A+K L A + ++Q E+
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 692 TISAVQHRNLVRLYGCCIEGARRLLVYD 719
S ++H N++RLYG + R L+ +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILE 88
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILE 91
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 16/108 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQSL 780
++APE G T +D++SFGVV E+ S L E + N Q L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVL 242
Query: 781 GLV-DPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDI 827
V D + D RV + +C Q +P MRP +V +L D+
Sbjct: 243 KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 650 KLGEGGYGPVYKGTLSD---GRV---IAVKQL-SIASHQGKNQFVNEIATISAVQHRNLV 702
+LG+G +G VY+G D G +AVK + AS + + +F+NE + + ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 703 RLYGCCIEGARRLLVYD 719
RL G +G L+V +
Sbjct: 84 RLLGVVSKGQPTLVVME 100
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 651 LGEGGYGPVYKGTLS------DGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRNLVR 703
LG G +G VY+G +S +AVK L + S Q + F+ E IS H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 704 LYGCCIEGARRLLVYD 719
G ++ R ++ +
Sbjct: 113 CIGVSLQSLPRFILLE 128
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
++ PE M G T K D +SFGV+ E+ S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILE 87
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILE 91
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILE 91
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILE 88
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILE 91
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILE 88
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILE 91
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILE 88
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILE 92
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILE 88
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILE 88
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILE 90
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILE 89
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILE 88
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 68 RHPNILRLYGYFHDATRVYLILE 90
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILE 89
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 67 RHPNILRLYGYFHDATRVYLILE 89
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILE 93
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILE 93
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 84 EEPI-------YIVTEYMSKGSL 99
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILE 91
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILE 85
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQLSIASHQG---KNQFVNEIATISAV 696
A +DF+ LG+G +G VY + ++A+K L A + ++Q E+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 697 QHRNLVRLYGCCIEGARRLLVYD 719
+H N++RLYG + R L+ +
Sbjct: 71 RHPNILRLYGYFHDATRVYLILE 93
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIAS 679
S + F E A + S +LG+G +G VY+G ++ G V +A+K + AS
Sbjct: 1 SAADVFVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAAS 59
Query: 680 HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ + +F+NE + + ++VRL G +G L++ +
Sbjct: 60 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 99
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 247
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 248 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 292
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 634 SYAELRSATKDFDPSN------KLGEGGYGPVYKGTLSDGRVI-AVKQLSIASHQGKNQF 686
S + T+D +P + +LG+G +G VYK + V+ A K + S + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 687 VNEIATISAVQHRNLVRL 704
+ EI +++ H N+V+L
Sbjct: 82 MVEIDILASCDHPNIVKL 99
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 645 FDPSNKLGEGGYGPV-YKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
D K+GEG G V GR +AVK + + Q + NE+ + QH N+V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 704 LYGCCIEG 711
+Y + G
Sbjct: 107 MYKSYLVG 114
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 634 SYAELRSATKDFDPSN------KLGEGGYGPVYKGTLSDGRVI-AVKQLSIASHQGKNQF 686
S + T+D +P + +LG+G +G VYK + V+ A K + S + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 687 VNEIATISAVQHRNLVRL 704
+ EI +++ H N+V+L
Sbjct: 82 MVEIDILASCDHPNIVKL 99
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 651 LGEGGYGPVYKGT-LSDGRVI----AVKQLSIASHQGKN-QFVNEIATISAVQHRNLVRL 704
LG G +G VYKG + +G + A+K L+ + N +F++E ++++ H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 705 YGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
G C+ +L+ L P + ++ E D
Sbjct: 83 LGVCLSPTIQLVT---QLMPHGCLLEYVHEHKD 112
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 634 SYAELRSATKDFDPSN------KLGEGGYGPVYKGTLSDGRVI-AVKQLSIASHQGKNQF 686
S + T+D +P + +LG+G +G VYK + V+ A K + S + +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 687 VNEIATISAVQHRNLVRL 704
+ EI +++ H N+V+L
Sbjct: 82 MVEIDILASCDHPNIVKL 99
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 640 SATKDFDPSNKLGEGGYGPVYK-GTLSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAV 696
S +D++ +G G YG K SDG+++ K+L S K V+E+ + +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+H N+VR Y I+ L Y+ EY G L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTL----YIVMEYCEGGDL 94
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK----NQFVNEIATISAVQH 698
+DFD LG+G +G VY + I ++ + K +Q E+ S ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYA 727
N++RLYG + R YL EYA
Sbjct: 72 PNILRLYGYFHDATR------VYLILEYA 94
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 640 SATKDFDPSNKLGEGGYGPVYK-GTLSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAV 696
S +D++ +G G YG K SDG+++ K+L S K V+E+ + +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+H N+VR Y I+ L Y+ EY G L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTL----YIVMEYCEGGDL 94
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK----NQFVNEIATISAVQH 698
+DFD LG+G +G VY + I ++ + K +Q E+ S ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 699 RNLVRLYGCCIEGARRLLVYDGYLAPEYA 727
N++RLYG + R YL EYA
Sbjct: 72 PNILRLYGYFHDATR------VYLILEYA 94
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 250 EEPI-------YIVTEYMSKGSL 265
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 651 LGEGGYGPVYKGTLS--DGRV----IAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVR 703
LGEG +G V K T GR +AVK L AS ++E + V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADV 738
LYG C + LL+ + A ++RG L E V
Sbjct: 91 LYGACSQDGPLLLIVE--YAKYGSLRGFLRESRKV 123
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 250 EEPI-------YIVTEYMSKGSL 265
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 651 LGEGGYGPVYKGTLS--DGRV----IAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVR 703
LGEG +G V K T GR +AVK L AS ++E + V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADV 738
LYG C + LL+ + A ++RG L E V
Sbjct: 91 LYGACSQDGPLLLIVE--YAKYGSLRGFLRESRKV 123
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 646 DPS-----NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
DPS ++G G +G V+ G + +A+K + + + F+ E + + H
Sbjct: 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPK 64
Query: 701 LVRLYGCCIEGARRLLV 717
LV+LYG C+E A LV
Sbjct: 65 LVQLYGVCLEQAPICLV 81
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNLHENNQS 779
+ +PE + K+DV+SFGV+ EV S G+ +N ++E + + +
Sbjct: 171 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV---------EDISTG 221
Query: 780 LGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
L P L + V + C + P RP SR++ LA E G
Sbjct: 222 FRLYKPRLA------STHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESG 266
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 651 LGEGGYGPVYKGTLS--DGRV----IAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVR 703
LGEG +G V K T GR +AVK L AS ++E + V H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADV 738
LYG C + LL+ + A ++RG L E V
Sbjct: 91 LYGACSQDGPLLLIVE--YAKYGSLRGFLRESRKV 123
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 640 SATKDFDPSNKLGEGGYGPVYK-GTLSDGRVIAVKQLSIAS--HQGKNQFVNEIATISAV 696
S +D++ +G G YG K SDG+++ K+L S K V+E+ + +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
+H N+VR Y I+ L Y+ EY G L
Sbjct: 63 KHPNIVRYYDRIIDRTNTTL----YIVMEYCEGGDL 94
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 10/96 (10%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGR-VIAVKQL---SIASHQGKNQFVNEIATISAVQHR 699
DF+ LG+G +G VY ++A+K L I ++Q EI + + H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 700 NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK 735
N++RLY + RR+ YL EYA RG L ++
Sbjct: 84 NILRLYNYFYD-RRRI-----YLILEYAPRGELYKE 113
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 75 EEPI-------YIVTEYMSKGSL 90
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 651 LGEGGYGPVYKGT-LSDGRVI----AVKQLSIASHQGKN-QFVNEIATISAVQHRNLVRL 704
LG G +G VYKG + +G + A+K L+ + N +F++E ++++ H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 705 YGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
G C+ +L+ L P + ++ E D
Sbjct: 106 LGVCLSPTIQLVT---QLMPHGCLLEYVHEHKD 135
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 73 EEPI-------YIVTEYMSKGSL 88
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTT 199
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 77 EEPI-------YIVTEYMSKGSL 92
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 251 EEPI-------YIVTEYMSKGSL 266
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 637 ELRSATKDFDPSN------KLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNE 689
E +D DP+ +LG+G +G VYK + G + A K + S + ++ E
Sbjct: 7 EYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVE 66
Query: 690 IATISAVQHRNLVRLYGC 707
I ++ H +V+L G
Sbjct: 67 IEILATCDHPYIVKLLGA 84
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 84 EEPI-------YIVTEYMSKGSL 99
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 79
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 80 TQEP-------IYIITEYMENGSLVD 98
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 333 EEPI-------YIVTEYMSKGSL 348
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNL 773
+ APE A+ G T K+DV+SFG++ E+ + GR ++ E + +E + +
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRM 483
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 630 PNTFSYA------ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL- 675
P FS A E A + S +LG+G +G VY+G ++ G V +A+K +
Sbjct: 6 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVN 64
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
AS + + +F+NE + + ++VRL G +G L++ +
Sbjct: 65 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 256
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 257 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 84 EEPI-------YIVTEYMSKGSL 99
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 630 PNTFSYA------ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL- 675
P FS A E A + S +LG+G +G VY+G ++ G V +A+K +
Sbjct: 6 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVN 64
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
AS + + +F+NE + + ++VRL G +G L++ +
Sbjct: 65 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 108
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 256
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 257 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 301
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 78 TQEP-------IYIITEYMENGSLVD 96
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 37.7 bits (86), Expect = 0.033, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
KD +LG G +G V G +A+K + S +++F+ E + + H LV
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLV 66
Query: 703 RLYGCCIEGARRLLVYDGYLA 723
+LYG C + R + + Y+A
Sbjct: 67 QLYGVCTK-QRPIFIITEYMA 86
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 78
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 79 TQEP-------IYIITEYMENGSLVD 97
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 86
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 87 TQEPI-------YIITEYMENGSLVD 105
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 81 EEPI-------YIVTEYMNKGSL 96
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 157 GICLRSEGSPLVVLPYM 173
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 97 GICLRSEGSPLVVLPYM 113
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 78 TQEP-------IYIITEYMENGSLVD 96
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 250 EEPI-------YIVGEYMSKGSL 265
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTT 376
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 84 TQEP-------IYIITEYMENGSLVD 102
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 116 GICLRSEGSPLVVLPYM 132
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 82
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 83 TQEP-------IYIITEYMENGSLVD 101
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 99 GICLRSEGSPLVVLPYM 115
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 78 TQEP-------IYIITEYMENGSLVD 96
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 96 GICLRSEGSPLVVLPYM 112
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 117 GICLRSEGSPLVVLPYM 133
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 103 GICLRSEGSPLVVLPYM 119
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 98 GICLRSEGSPLVVLPYM 114
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 99 GICLRSEGSPLVVLPYM 115
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 98 GICLRSEGSPLVVLPYM 114
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 87
Query: 709 IE 710
+
Sbjct: 88 TQ 89
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 83
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 84 TQEP-------IYIITEYMENGSLVD 102
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 95 GICLRSEGSPLVVLPYM 111
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 85
Query: 709 IE 710
+
Sbjct: 86 TQ 87
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 98 GICLRSEGSPLVVLPYM 114
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 81 EEPI-------YIVTEYMNKGSL 96
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 90 GICLRSEGSPLVVLPYM 106
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 630 PNTFSYA------ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL- 675
P FS A E A + S +LG+G +G VY+G ++ G V +A+K +
Sbjct: 28 PEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVN 86
Query: 676 SIASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
AS + + +F+NE + + ++VRL G +G L++ +
Sbjct: 87 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 130
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 278
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 279 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 323
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 96 GICLRSEGSPLVVLPYM 112
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 72
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTE 734
+ Y+ EY G L +
Sbjct: 73 TQEP-------IYIITEYMENGSLVD 91
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKG--TLSDGRVIAVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+KLGEG Y VYKG L+D ++A+K++ + +G + E++ + ++H N+V L+
Sbjct: 8 DKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 93 GICLRSEGSPLVVLPYM 109
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 84 EEPI-------YIVIEYMSKGSL 99
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 709 IE 710
+
Sbjct: 74 TQ 75
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 97 GICLRSEGSPLVVLPYM 113
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 651 LGEGGYGPVYKGTL--SDGRVI--AVKQLSIASHQGK-NQFVNEIATISAVQHRNLVRLY 705
+G G +G VY GTL +DG+ I AVK L+ + G+ +QF+ E + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 706 GCCIEGARRLLVYDGYL 722
G C+ LV Y+
Sbjct: 98 GICLRSEGSPLVVLPYM 114
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 84 EEPI-------YIVCEYMSKGSL 99
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 84 EEPI-------YIVIEYMSKGSL 99
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE 85
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFE 82
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIAS 679
S + + E A + S +LG+G +G VY+G ++ G V +A+K + AS
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAAS 61
Query: 680 HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ + +F+NE + + ++VRL G +G L++ +
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 101
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 249
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 250 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIAS 679
S + + E A + S +LG+G +G VY+G ++ G V +A+K + AS
Sbjct: 4 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAAS 62
Query: 680 HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ + +F+NE + + ++VRL G +G L++ +
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 102
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 250
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 251 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFE 83
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFE 84
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIASHQGKNQFVN 688
E A + S +LG+G +G VY+G ++ G V +A+K + AS + + +F+N
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 689 EIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
E + + ++VRL G +G L++ +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIME 93
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 241
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D ++ + +C Q +P MRP +++ + ++E G
Sbjct: 242 --GLLDKP-----DNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 286
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE 85
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIAS 679
S + + E A + S +LG+G +G VY+G ++ G V +A+K + AS
Sbjct: 3 SAADVYVPDEWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAAS 61
Query: 680 HQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ + +F+NE + + ++VRL G +G L++ +
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIME 101
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 249
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 250 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFE 82
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFE 82
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE 85
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFE 84
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFE 82
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 643 KDFDPSN------KLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISA 695
+D DP+ +LG+G +G VYK + G + A K + S + ++ EI ++
Sbjct: 5 RDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILAT 64
Query: 696 VQHRNLVRLYGC 707
H +V+L G
Sbjct: 65 CDHPYIVKLLGA 76
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE 85
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFE 83
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFE 84
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF--VNEIA---TIS 694
AT ++P ++G G YG VYK G +A+K + + + + V E+A +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 695 AVQHRNLVRLYGCC 708
A +H N+VRL C
Sbjct: 62 AFEHPNVVRLMDVC 75
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 710 E 710
E
Sbjct: 74 E 74
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+ +
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFE 83
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFE 83
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGT--LSDGRVIAVKQLSIASHQGKNQF--VNEIATI 693
L A + ++ ++GEG YG V+K + GR +A+K++ + + + + E+A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 694 SAV---QHRNLVRLYGCC 708
+ +H N+VRL+ C
Sbjct: 66 RHLETFEHPNVVRLFDVC 83
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 63 NIVKLLDVIHTENKLYLVFE 82
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFE 86
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFE 84
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF--VNEIA---TIS 694
AT ++P ++G G YG VYK G +A+K + + + + V E+A +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 695 AVQHRNLVRLYGCC 708
A +H N+VRL C
Sbjct: 62 AFEHPNVVRLMDVC 75
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF--VNEIA---TIS 694
AT ++P ++G G YG VYK G +A+K + + + + V E+A +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 695 AVQHRNLVRLYGCC 708
A +H N+VRL C
Sbjct: 62 AFEHPNVVRLMDVC 75
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIASHQGKNQFVN 688
E A + S +LG+G +G VY+G ++ G V +A+K + AS + + +F+N
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 689 EIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
E + + ++VRL G +G L++ +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIME 98
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 246
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 247 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE 85
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIASHQGKNQFVN 688
E A + S +LG+G +G VY+G ++ G V +A+K + AS + + +F+N
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 689 EIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
E + + ++VRL G +G L++ +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIME 95
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 243
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 244 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIASHQGKNQFVN 688
E A + S +LG+G +G VY+G ++ G V +A+K + AS + + +F+N
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 689 EIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
E + + ++VRL G +G L++ +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIME 102
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 250
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D + + +C Q +P MRP +++ + ++E G
Sbjct: 251 --GLLDKP-----DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 295
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 63 NIVKLLDVIHTENKLYLVFE 82
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 63 NIVKLLDVIHTENKLYLVFE 82
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFE 82
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQ 697
+ ++F K+GEG YG VYK G V+A+K++ + + + + EI+ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 698 HRNLVRLYGCCIEGARRLLVYD 719
H N+V+L + LV++
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE 85
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAV 696
LR A+ DF+ LG+G +G V K + D R A+K++ + + + ++E+ ++++
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 697 QHRNLVRLYGCCIE 710
H+ +VR Y +E
Sbjct: 60 NHQYVVRYYAAWLE 73
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 70 NIVKLLDVIHTENKLYLVFE 89
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGT--LSDGRVIAVKQLSIASHQGKNQF--VNEIATI 693
L A + ++ ++GEG YG V+K + GR +A+K++ + + + + E+A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 694 SAV---QHRNLVRLYGCC 708
+ +H N+VRL+ C
Sbjct: 66 RHLETFEHPNVVRLFDVC 83
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGT--LSDGRVIAVKQLSIASHQGKNQF--VNEIATI 693
L A + ++ ++GEG YG V+K + GR +A+K++ + + + + E+A +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 694 SAV---QHRNLVRLYGCC 708
+ +H N+VRL+ C
Sbjct: 66 RHLETFEHPNVVRLFDVC 83
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRV-------IAVKQL-SIASHQGKNQFVN 688
E A + S +LG+G +G VY+G ++ G V +A+K + AS + + +F+N
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEG-VAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 689 EIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
E + + ++VRL G +G L++ +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIME 95
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 18/112 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKI--YLLEWAWNLHENNQ 778
+++PE G T +DV+SFGVV E+ + L E++ +++E
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG--------- 243
Query: 779 SLGLVDPTLTEFNDKEALRVIGVALLCTQASPMMRPPMSRVVAMLAGDIEVG 830
GL+D D ++ + +C Q +P MRP +++ + ++E G
Sbjct: 244 --GLLDKP-----DNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 288
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 36.6 bits (83), Expect = 0.064, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHLTE 734
E Y+ EY +G L +
Sbjct: 84 EEPI-------YIVTEYMSKGCLLD 101
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GR 752
+ APE A+ G T K+DV+SFG++ E+ + GR
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 67 NIVKLLDVIHTENKLYLVFE 86
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
KLG G +G V+ G ++ +AVK L + F+ E + +QH LVRLY
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYA 74
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 36.6 bits (83), Expect = 0.066, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK----NQFVNEIATISAVQHR 699
DFD LG+G +G VY + I ++ S K +Q EI S ++H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 700 NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
N++R+Y +R+ YL E+A RG L
Sbjct: 75 NILRMYN-YFHDRKRI-----YLMLEFAPRGEL 101
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 36.6 bits (83), Expect = 0.066, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK----NQFVNEIATISAVQHR 699
DFD LG+G +G VY + I ++ S K +Q EI S ++H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 700 NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
N++R+Y +R+ YL E+A RG L
Sbjct: 76 NILRMYN-YFHDRKRI-----YLMLEFAPRGEL 102
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAV 696
LR A+ DF+ LG+G +G V K + D R A+K++ + + + ++E+ ++++
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 697 QHRNLVRLYGCCIE 710
H+ +VR Y +E
Sbjct: 60 NHQYVVRYYAAWLE 73
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 63 NIVKLLDVIHTENKLYLVFE 82
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 64 NIVKLLDVIHTENKLYLVFE 83
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+K++ + + + + EI+ + + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 70 NIVKLLDVIHTENKLYLVFE 89
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 103 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 130
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 103 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 130
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ G ++ +AVK L + F+ E + +QH LVRLY
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 709 IEGARRLLVYDGYLAPEYAMRGHL 732
R + Y+ EY +G L
Sbjct: 78 ---TREEPI---YIITEYMAKGSL 95
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 7/43 (16%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-------GRANSD 756
+ APE G T K+DV+SFG++ E+++ GR N+D
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 645 FDPSNKLGEGGYGPVY----KGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
+ KLG G YG V K T ++ + +K+ S+ + ++E+A + + H N
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
+++LY + LV + Y E L +K V+ +V+SG
Sbjct: 66 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSG 116
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 103 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 130
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 103 IIHLLGACTQ--------DGPLYVIVEYASKGNLRE 130
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAV 696
LR A+ DF+ LG+G +G V K + D R A+K++ + + + ++E+ ++++
Sbjct: 2 LRYAS-DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASL 59
Query: 697 QHRNLVRLYGCCIE 710
H+ +VR Y +E
Sbjct: 60 NHQYVVRYYAAWLE 73
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 650 KLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
K+GEG G V T G+ +AVK++ + Q + NE+ + H N+V +Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 709 IEG 711
+ G
Sbjct: 112 LVG 114
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSD 756
++APE EK DVFSFG+V E+I GR N+D
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
LG+G +G K T + G V+ +K+L + + F+ E+ + ++H N+++ G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 710 EGAR 713
+ R
Sbjct: 78 KDKR 81
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Query: 645 FDPSNKLGEGGYGPVY----KGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRN 700
+ KLG G YG V K T ++ + +K+ S+ + ++E+A + + H N
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 82
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
+++LY + LV + Y E L +K V+ +V+SG
Sbjct: 83 IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSG 133
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 103 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 130
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
+ ++ K+GEG YG V+K + ++A+K++ + + + EI + ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+VRL+ + LV++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFE 81
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNL 701
DF+P +G GG+G V++ D A+K++ + + + + + + E+ ++ ++H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 702 VRLYGCCIE 710
VR + +E
Sbjct: 67 VRYFNAWLE 75
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 36.2 bits (82), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF-----VNEIA--- 691
AT ++P ++G G YG VYK G +A+K + + + G V E+A
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 692 TISAVQHRNLVRLYGCC 708
+ A +H N+VRL C
Sbjct: 67 RLEAFEHPNVVRLMDVC 83
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.8 bits (81), Expect = 0.096, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 650 KLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
KLG+G +G V+ GT + +A+K L + F+ E + ++H LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 710 EGARRLLVYDGYLAPEYAMRGHLTE 734
E Y+ EY +G L +
Sbjct: 84 EEPI-------YIVMEYMSKGCLLD 101
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GR 752
+ APE A+ G T K+DV+SFG++ E+ + GR
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.8 bits (81), Expect = 0.098, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK----NQFVNEIATISAVQHR 699
DFD LG+G +G VY + I ++ S K +Q EI S ++H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 700 NLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
N++R+Y +R+ YL E+A RG L
Sbjct: 75 NILRMYN-YFHDRKRI-----YLMLEFAPRGEL 101
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 103 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 130
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K+ +G+G +G V G G +AVK I + F+ E + ++ ++H NLV
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLV 62
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+L G +E L Y+ EY +G L +
Sbjct: 63 QLLGVIVEEKGGL-----YIVTEYMAKGSLVD 89
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRN 700
+D ++G G +G V+ G L +D ++AVK K +F+ E + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 701 LVRLYGCCIE 710
+VRL G C +
Sbjct: 174 IVRLIGVCTQ 183
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTL-SDGRVIAVKQL-SIASHQGKNQFVNEIATISAVQHRN 700
+D ++G G +G V+ G L +D ++AVK K +F+ E + H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 701 LVRLYGCCIE 710
+VRL G C +
Sbjct: 174 IVRLIGVCTQ 183
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
+ ++ K+GEG YG V+K + ++A+K++ + + + EI + ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+VRL+ + LV++
Sbjct: 62 NIVRLHDVLHSDKKLTLVFE 81
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQ-GKNQFVNEIATISAVQHRNL 701
DF+P LG GG+G V++ D A+K++ + + + + + + E+ ++ ++H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 702 VRLYGCCIE 710
VR + +E
Sbjct: 66 VRYFNAWLE 74
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K+ +G+G +G V G G +AVK I + F+ E + ++ ++H NLV
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLV 68
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+L G +E L Y+ EY +G L +
Sbjct: 69 QLLGVIVEEKGGL-----YIVTEYMAKGSLVD 95
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G +G V+ GT + +A+K L + ++ F+ E + ++H LV+LY
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVV 73
Query: 709 IEGARRLLVYDGYLAPEYAMRGHL 732
E Y+ EY +G L
Sbjct: 74 SEEPI-------YIVTEYMNKGSL 90
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ APE A+ G T K+DV+SFG++ E+++
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 77 NPHVCRLLGICLTSTVQLIM 96
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
K+ +G+G +G V G G +AVK I + F+ E + ++ ++H NLV
Sbjct: 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVK--CIKNDATAQAFLAEASVMTQLRHSNLV 77
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
+L G +E L Y+ EY +G L +
Sbjct: 78 QLLGVIVEEKGGL-----YIVTEYMAKGSLVD 104
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 77 NPHVCRLLGICLTSTVQLIM 96
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 80 NPHVCRLLGICLTSTVQLIM 99
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF---VNEIATISAVQH 698
K F ++G G +G VY + + V+A+K++S + Q ++ + E+ + ++H
Sbjct: 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 74
Query: 699 RNLVRLYGCCIEGARRLLVYD 719
N ++ GC + LV +
Sbjct: 75 PNTIQYRGCYLREHTAWLVME 95
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 621 EVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASH 680
+V+ G + + F + K+ +G+G +G V G G +AVK I +
Sbjct: 171 KVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVK--CIKND 227
Query: 681 QGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
F+ E + ++ ++H NLV+L G +E L Y+ EY +G L +
Sbjct: 228 ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL-----YIVTEYMAKGSLVD 276
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 80 NPHVCRLLGICLTSTVQLIM 99
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQF---VNEIATISAVQH 698
K F ++G G +G VY + + V+A+K++S + Q ++ + E+ + ++H
Sbjct: 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH 113
Query: 699 RNLVRLYGCCIEGARRLLVYD 719
N ++ GC + LV +
Sbjct: 114 PNTIQYRGCYLREHTAWLVME 134
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 76 NPHVCRLLGICLTSTVQLIM 95
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 79 NPHVCRLLGICLTSTVQLIM 98
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM 97
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM 97
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 149 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 176
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 698 HRNLVRLYGCCIEGARRLLV 717
+ ++ RL G C+ +L++
Sbjct: 78 NPHVCRLLGICLTSTVQLIM 97
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK--NQFVNEIATISAVQHRNL 701
D + K+G G +G V++ G +AVK L + N+F+ E+A + ++H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
V G + +V EY RG L
Sbjct: 97 VLFMGAVTQPPNLSIVT------EYLSRGSL 121
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
+LG G G V+ G + +AVK L S + F+ E + +QH+ LVRLY
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 709 IE 710
+
Sbjct: 78 TQ 79
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 70 NPHVCRLLGICLTSTVQLI 88
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGK--NQFVNEIATISAVQHRNL 701
D + K+G G +G V++ G +AVK L + N+F+ E+A + ++H N+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 702 VRLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
V G + +V EY RG L
Sbjct: 97 VLFMGAVTQPPNLSIVT------EYLSRGSL 121
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 79 NPHVCRLLGICLTSTVQLI 97
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 101 NPHVCRLLGICLTSTVQLI 119
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 86 NPHVCRLLGICLTSTVQLI 104
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 78 NPHVCRLLGICLTSTVQLI 96
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 73 NPHVCRLLGICLTSTVQLI 91
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 95 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 122
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 79 NPHVCRLLGICLTSTVQLI 97
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 82 NPHVCRLLGICLTSTVQLI 100
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 619 DEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI 677
DEE+L + S + K + K+G+G G VY ++ G+ +A++Q+++
Sbjct: 2 DEEILEKLRS------IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 678 ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLA 723
K +NEI + ++ N+V + G +V + YLA
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME-YLA 100
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL 767
++APE R K D++S G++A+E+I G N +YL+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 67/189 (35%), Gaps = 55/189 (29%)
Query: 166 STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXX 225
S F L N+ L S H + L L++ GNSFQ
Sbjct: 439 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF------------- 485
Query: 226 RISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
+ DI+ L+NL L L + P+ L +LQ L++S NN
Sbjct: 486 -LPDIF---------TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN------ 529
Query: 286 RTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGP-------FPSWVTSSL 338
F++D T P + +LQ +D S NH+ FPS +
Sbjct: 530 --FFSLD--------------TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF-- 571
Query: 339 QMNLAVNNF 347
+NL N+F
Sbjct: 572 -LNLTQNDF 579
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 83 NPHVCRLLGICLTSTVQLI 101
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 90 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 117
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 78 NPHVCRLLGICLTSTVQLI 96
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 79 NPHVCRLLGICLTSTVQLI 97
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 619 DEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI 677
DEE+L + S + K + K+G+G G VY ++ G+ +A++Q+++
Sbjct: 2 DEEILEKLRS------IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 678 ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLA 723
K +NEI + ++ N+V + G +V + YLA
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME-YLA 100
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL 767
++APE R K D++S G++A+E+I G N +YL+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 619 DEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI 677
DEE+L + S + K + K+G+G G VY ++ G+ +A++Q+++
Sbjct: 2 DEEILEKLRS------IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 678 ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLA 723
K +NEI + ++ N+V + G +V + YLA
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME-YLA 100
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL 767
++APE R K D++S G++A+E+I G N +YL+
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 76 NPHVCRLLGICLTSTVQLI 94
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+K+L A S + + ++E +++V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 83 NPHVCRLLGICLTSTVQLI 101
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 92 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 119
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 619 DEEVLVGIESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSI 677
DEE+L + S + K + K+G+G G VY ++ G+ +A++Q+++
Sbjct: 3 DEEILEKLRS------IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 678 ASHQGKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLA 723
K +NEI + ++ N+V + G +V + YLA
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME-YLA 101
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL 767
++APE R K D++S G++A+E+I G N +YL+
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 651 LGEGGYGPVYK-GTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCCI 709
LG G +G V+K + G +A K + + K + NEI+ ++ + H NL++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYD-AF 155
Query: 710 EGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVI 749
E D L EY G L ++ S+ + L+ I
Sbjct: 156 ESKN-----DIVLVMEYVDGGELFDRIIDESYNLTELDTI 190
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLSD----GRV----IAVKQLSIASHQGKNQF 686
+ ++R+ F+ S LG+G + ++KG + G++ + +K L A F
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 687 VNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ +S + H++LV YG C+ G +LV +
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCVCGDENILVQE 92
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 67/189 (35%), Gaps = 55/189 (29%)
Query: 166 STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXX 225
S F L N+ L S H + L L++ GNSFQ
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF------------- 461
Query: 226 RISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
+ DI+ L+NL L L + P+ L +LQ L++S NN
Sbjct: 462 -LPDIF---------TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN------ 505
Query: 286 RTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGP-------FPSWVTSSL 338
F++D T P + +LQ +D S NH+ FPS +
Sbjct: 506 --FFSLD--------------TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF-- 547
Query: 339 QMNLAVNNF 347
+NL N+F
Sbjct: 548 -LNLTQNDF 555
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 67/189 (35%), Gaps = 55/189 (29%)
Query: 166 STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXX 225
S F L N+ L S H + L L++ GNSFQ
Sbjct: 120 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF------------- 166
Query: 226 RISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
+ DI+ L+NL L L + P+ L +LQ L++S NN
Sbjct: 167 -LPDIF---------TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN------ 210
Query: 286 RTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDLSYNHLSGP-------FPSWVTSSL 338
F++D T P + +LQ +D S NH+ FPS +
Sbjct: 211 --FFSLD--------------TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAF-- 252
Query: 339 QMNLAVNNF 347
+NL N+F
Sbjct: 253 -LNLTQNDF 260
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 651 LGEGGYGPVYKGTL--SDGRV---IAVKQLSIA-SHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VYKG L S G+ +A+K L + + + F+ E + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 705 YGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFS 740
G I + +++ Y+ A+ L EK FS
Sbjct: 112 EG-VISKYKPMMIITEYME-NGALDKFLREKDGEFS 145
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 645 FDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQG--KNQFVNEIATISAVQHRNL 701
++ K+GEG YG V+K D G+++A+K+ + K + EI + ++H NL
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 702 VRLYGCCIEGARRLLVYD 719
V L R LV++
Sbjct: 65 VNLLEVFRRKRRLHLVFE 82
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 638 LRSATKDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGK--NQFVNEIATIS 694
LR F+ +G G YG VYKG + G++ A+K + + + + Q +N + S
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS 78
Query: 695 AVQHRNLVRLYGCCIE 710
HRN+ YG I+
Sbjct: 79 --HHRNIATYYGAFIK 92
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNL 701
K + K+G+G G VY ++ G+ +A++Q+++ K +NEI + ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 702 VRLYGCCIEGARRLLVYDGYLA 723
V + G +V + YLA
Sbjct: 81 VNYLDSYLVGDELWVVME-YLA 101
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLL 767
++APE R K D++S G++A+E+I G N +YL+
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+ ++ + + + + EI+ + + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 63 NIVKLLDVIHTENKLYLVFE 82
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQG--KNQFVNEIATISAVQHR 699
++F K+GEG YG VYK G V+A+ ++ + + + + EI+ + + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 700 NLVRLYGCCIEGARRLLVYD 719
N+V+L + LV++
Sbjct: 62 NIVKLLDVIHTENKLYLVFE 81
>pdb|3A79|A Chain A, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
pdb|3A7B|A Chain A, Crystal Structure Of Tlr2-Streptococcus Pneumoniae
Lipoteichoic Acid Complex
pdb|3A7C|A Chain A, Crystal Structure Of Tlr2-Pe-Dtpa Complex
Length = 580
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGN---NSLSGTLPTQKSEN 315
+IPSG+ +++LDLSFN +T L +L L L + N++ G +
Sbjct: 45 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD-AFYSLGS 101
Query: 316 LQNIDLSYNHLSGPFPSWV--TSSLQ-MNLAVNNFTFDGSNISVFPGLQCLQ 364
L+++DLS NHLS SW SSL+ +NL N + G S+FP L LQ
Sbjct: 102 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVT-SLFPNLTNLQ 152
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 96 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 123
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 635 YAELRSATKDFDPSNKLGEGGYGPVYKGTLSD----GRV----IAVKQLSIASHQGKNQF 686
+ ++R+ F+ S LG+G + ++KG + G++ + +K L A F
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESF 59
Query: 687 VNEIATISAVQHRNLVRLYGCCIEGARRLLVYD 719
+ +S + H++LV YG C G +LV +
Sbjct: 60 FEAASMMSKLSHKHLVLNYGVCFCGDENILVQE 92
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 611 MRRKKDNDDEEVLVGIES------KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL 664
M+ +D D +V + + +P SY + + +G G +G VY+ L
Sbjct: 20 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV----------IGNGSFGVVYQAKL 69
Query: 665 SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 70 CDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 106
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 611 MRRKKDNDDEEVLVGIES------KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL 664
M+ +D D +V + + +P SY + + +G G +G VY+ L
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV----------IGNGSFGVVYQAKL 75
Query: 665 SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 76 CDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 112
>pdb|2Z81|A Chain A, Crystal Structure Of The Tlr1-tlr2 Heterodimer Induced By
Binding Of A Tri-acylated Lipopeptide
pdb|2Z82|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 259 TIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGN---NSLSGTLPTQKSEN 315
+IPSG+ +++LDLSFN +T L +L L L + N++ G +
Sbjct: 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGD-AFYSLGS 75
Query: 316 LQNIDLSYNHLSGPFPSWV--TSSLQ-MNLAVNNFTFDGSNISVFPGLQCLQ 364
L+++DLS NHLS SW SSL+ +NL N + G S+FP L LQ
Sbjct: 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVT-SLFPNLTNLQ 126
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
DF +G GG+G V+K DG+ ++++ + + + E+ ++ + H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE----REVKALAKLDHVNIV 68
Query: 703 RLYGC 707
GC
Sbjct: 69 HYNGC 73
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 611 MRRKKDNDDEEVLVGIES------KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL 664
M+ +D D +V + + +P SY + + +G G +G VY+ L
Sbjct: 26 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV----------IGNGSFGVVYQAKL 75
Query: 665 SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 76 CDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 112
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 611 MRRKKDNDDEEVLVGIES------KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL 664
M+ +D D +V + + +P SY + + +G G +G VY+ L
Sbjct: 4 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTD----------TKVIGNGSFGVVYQAKL 53
Query: 665 SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 54 CDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 90
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 611 MRRKKDNDDEEVLVGIES------KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL 664
M+ +D D +V + + +P SY + + +G G +G VY+ L
Sbjct: 28 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV----------IGNGSFGVVYQAKL 77
Query: 665 SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 78 CDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 114
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 611 MRRKKDNDDEEVLVGIES------KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL 664
M+ +D D +V + + +P SY + + +G G +G VY+ L
Sbjct: 30 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKV----------IGNGSFGVVYQAKL 79
Query: 665 SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 80 CDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 116
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 33.9 bits (76), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 21/101 (20%)
Query: 611 MRRKKDNDDEEVLVGIES------KPNTFSYAELRSATKDFDPSNKLGEGGYGPVYKGTL 664
M+ +D D +V + + +P SY + + +G G +G VY+ L
Sbjct: 71 MKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTD----------TKVIGNGSFGVVYQAKL 120
Query: 665 SD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 121 CDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 157
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQG-KNQFVNEIATISAV-QHRNLV 702
LG G +G V + T D + +AVK L +H K ++E+ +S + QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 114 NLLGACTHGGPVLVI------TEYCCYGDL 137
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ QGK E+ + + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
LG+G YG VY G LS+ IA+K++ + EIA ++H+N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 86
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQG-KNQFVNEIATISAV-QHRNLV 702
LG G +G V + T D + +AVK L +H K ++E+ +S + QH N+V
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 703 RLYGCCIEGARRLLV 717
L G C G L++
Sbjct: 99 NLLGACTHGGPVLVI 113
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQG-KNQFVNEIATISAV-QHRNLV 702
LG G +G V + T D + +AVK L +H K ++E+ +S + QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 114 NLLGACTHGGPVLVI------TEYCCYGDL 137
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ QGK E+ + + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 89 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 116
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 81 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 108
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ YA +G+L E
Sbjct: 103 IINLLGACTQ--------DGPLYVIVAYASKGNLRE 130
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 85 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 112
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQG-KNQFVNEIATISAV-QHRNLV 702
LG G +G V + T D + +AVK L +H K ++E+ +S + QH N+V
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 106 NLLGACTHGGPVLVI------TEYCCYGDL 129
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 96 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 123
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ QGK E+ + + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRL 78
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 88 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 115
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSI-ASHQGKNQFVNEIATISA 695
A +D + LGEG +G VY+G ++ + +AVK + K +F++E +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK----ADVFSFGVVALEVISG 751
+ H ++V+L G IE ++ + Y Y GH E+ V + + +L++
Sbjct: 82 LDHPHIVKLIG-IIEEEPTWIIMELY---PYGELGHYLERNKNSLKVLTLVLYSLQICKA 137
Query: 752 RA 753
A
Sbjct: 138 MA 139
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 137 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 164
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR----VIAVKQLSI-ASHQGKNQFVNEIATISA 695
A +D + LGEG +G VY+G ++ + +AVK + K +F++E +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK----ADVFSFGVVALEVISG 751
+ H ++V+L G IE ++ + Y Y GH E+ V + + +L++
Sbjct: 66 LDHPHIVKLIG-IIEEEPTWIIMELY---PYGELGHYLERNKNSLKVLTLVLYSLQICKA 121
Query: 752 RA 753
A
Sbjct: 122 MA 123
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVYKGTL------SDGRV--IAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V RV +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 96 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 123
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQL-SIASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L S A+ + + ++E+ + + +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ EYA +G+L E
Sbjct: 96 IINLLGACTQ--------DGPLYVIVEYASKGNLRE 123
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQG-KNQFVNEIATISAV-QHRNLV 702
LG G +G V + T D + +AVK L +H K ++E+ +S + QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 703 RLYGCCIEGARRLLV 717
L G C G L++
Sbjct: 114 NLLGACTHGGPVLVI 128
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
LG+G YG VY G LS+ IA+K++ + EIA ++H+N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLG 72
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL-YGCC 708
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRLRYFFY 83
Query: 709 IEGARRLLVY 718
G ++ +VY
Sbjct: 84 SSGEKKDVVY 93
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.5 bits (75), Expect = 0.61, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGTLS-DGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLV 702
DF +G GG+G V+K DG+ +K++ + + + E+ ++ + H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE----REVKALAKLDHVNIV 67
Query: 703 RLYGC 707
GC
Sbjct: 68 HYNGC 72
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
KLG G +G V+ T + +AVK + S F+ E + +QH LV+L+
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 708 C 708
Sbjct: 79 V 79
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNL 773
+ APE G T K+DV+SFG++ +E+++ GR + E I LE + +
Sbjct: 178 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM 231
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQG-KNQFVNEIATISAV-QHRNLV 702
LG G +G V + T D + +AVK L +H K ++E+ +S + QH N+V
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 114 NLLGACTHGGPVLVI------TEYCCYGDL 137
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 12/83 (14%)
Query: 628 SKPNTFSYAELRSATKDFDPSNKLGEGGYGPVYK-GTLSDGRVIAVKQLSIASHQGKNQF 686
S+P +F + F ++LG G YG V+K + DGR+ AVK+ S++ +G
Sbjct: 49 SRPESF-------FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDR 100
Query: 687 VNEIATISAVQHRNLVRLYGCCI 709
++A + + + V + CC+
Sbjct: 101 ARKLAEVGSHEK---VGQHPCCV 120
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 13/122 (10%)
Query: 641 ATKDFDPSNKLGEGGYGPVYKGTLSDGR----VIAVKQLSI-ASHQGKNQFVNEIATISA 695
A +D + LGEG +G VY+G ++ + +AVK + K +F++E +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 696 VQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEK----ADVFSFGVVALEVISG 751
+ H ++V+L G IE ++ + Y Y GH E+ V + + +L++
Sbjct: 70 LDHPHIVKLIG-IIEEEPTWIIMELY---PYGELGHYLERNKNSLKVLTLVLYSLQICKA 125
Query: 752 RA 753
A
Sbjct: 126 MA 127
>pdb|2Z7X|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 549
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 252 RNALITGT------IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLS 305
RN + G+ IPSG+ E +++LDLS N +T L +L L L +N ++
Sbjct: 6 RNGICKGSSGSLNSIPSGLTE--AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 63
Query: 306 GTLPTQKSE--NLQNIDLSYNHLSGPFPSW---VTSSLQMNLAVNNFTFDGSNISVFPGL 360
S +L+++DLSYN+LS SW ++S +NL N + G S+F L
Sbjct: 64 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET-SLFSHL 122
Query: 361 QCLQ 364
LQ
Sbjct: 123 TKLQ 126
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 721 YLAPEY--AMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ 778
++APE +RG+ KAD++SFG+ A+E+ +G A + K+ +L L +
Sbjct: 187 WMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY-HKYPPMKVLML----TLQNDPP 240
Query: 779 SLGLVDPTLTEFNDKEALRVIGVAL-----LCTQASPMMRPPMSRVV 820
SL T DKE L+ G + LC Q P RP + ++
Sbjct: 241 SLE------TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
KLG G +G V+ T + +AVK + S F+ E + +QH LV+L+
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 246
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNL 773
+ APE G T K+DV+SFG++ +E+++ GR + E I LE + +
Sbjct: 335 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM 388
>pdb|2Z80|A Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
pdb|2Z80|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 353
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 252 RNALITGT------IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLS 305
RN + G+ IPSG+ E +++LDLS N +T L +L L L +N ++
Sbjct: 32 RNGICKGSSGSLNSIPSGLTE--AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN 89
Query: 306 GTLPTQKSE--NLQNIDLSYNHLSGPFPSW---VTSSLQMNLAVNNFTFDGSNISVFPGL 360
S +L+++DLSYN+LS SW ++S +NL N + G S+F L
Sbjct: 90 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET-SLFSHL 148
Query: 361 QCLQ 364
LQ
Sbjct: 149 TKLQ 152
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 644 DFDPSNKLGEGGYGPVYKGT-LSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAVQ 697
+F LG G +G VYKG + +G +A+ +L A S + + ++E +++V
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 698 HRNLVRLYGCCIEGARRLL 716
+ ++ RL G C+ +L+
Sbjct: 110 NPHVCRLLGICLTSTVQLI 128
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 20/96 (20%)
Query: 651 LGEGGYGPVY--------KGTLSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAV-QHRN 700
LGEG +G V K + +AVK L A+ + + V+E+ + + +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 701 LVRLYGCCIEGARRLLVYDG--YLAPEYAMRGHLTE 734
++ L G C + DG Y+ YA +G+L E
Sbjct: 103 IINLLGACTQ--------DGPLYVIVGYASKGNLRE 130
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 648 SNKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
S ++G G +G VYKG + + ++ + + F NE+A + +H N++ G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 19/107 (17%)
Query: 721 YLAPEY--AMRGHLTEKADVFSFGVVALEVISGRANSDNSLDTEKIYLLEWAWNLHENNQ 778
++APE +RG+ KAD++SFG+ A+E+ +G A + K+ +L L +
Sbjct: 192 WMAPEVMEQVRGY-DFKADIWSFGITAIELATGAAPY-HKYPPMKVLML----TLQNDPP 245
Query: 779 SLGLVDPTLTEFNDKEALRVIGVAL-----LCTQASPMMRPPMSRVV 820
SL T DKE L+ G + LC Q P RP + ++
Sbjct: 246 SLE------TGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI + +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGCC 708
KLG G +G V+ T + +AVK + S F+ E + +QH LV+L+
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVV 252
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVIS-GRANSDNSLDTEKIYLLEWAWNL 773
+ APE G T K+DV+SFG++ +E+++ GR + E I LE + +
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM 404
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 640 SATKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATI 693
S T ++ +LG+G + V + G ++I K+LS HQ + E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 694 SAVQHRNLVRLYGCCIEGARRLLVYD 719
++H N+VRL+ E LV+D
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFD 83
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 649 NKLGEGGYGPV-YKGTLSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYGC 707
KLGEGG+ V L DG A+K++ Q + + E H N++RL
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 708 CI--EGARRLLVYDGYLAPEYAMRGHL 732
C+ GA+ ++ +L + RG L
Sbjct: 95 CLRERGAK----HEAWLLLPFFKRGTL 117
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 31/129 (24%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVN-----EI 690
+++S K ++ + LGEG + VYK + +++A+K++ + +N EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 691 ATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ + H N++ L D + GH + + VF F LEVI
Sbjct: 64 KLLQELSHPNIIGL-------------LDAF--------GHKSNISLVFDFMETDLEVII 102
Query: 751 GRANSDNSL 759
DNSL
Sbjct: 103 ----KDNSL 107
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 78
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 78
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 79
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Query: 240 VMSLKNLKDLSLRNALITG----TIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFN-IDS 293
+ +LK L +L+ ++TG ++P+G+ +L NL+ L L N L +P +F+ + +
Sbjct: 78 ISALKELTNLTY--LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS-LPDGVFDKLTN 134
Query: 294 LNYLFLGNNSLSGTLPT---QKSENLQNIDLSYNHL 326
L YL L +N L +LP K NL +DLSYN L
Sbjct: 135 LTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSYNQL 169
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 91
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 97
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 86
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 78
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 640 SATKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATI 693
S T ++ +LG+G + V + G ++I K+LS HQ + E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 694 SAVQHRNLVRLYGCCIEGARRLLVYD 719
++H N+VRL+ E LV+D
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFD 83
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 90
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 243 LKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLF-NIDSLNYLFLG 300
L NL+ L + +T IP+G+ +L L LDL+ N+L IPR F N+ SL +++L
Sbjct: 56 LVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLKS-IPRGAFDNLKSLTHIYLY 113
Query: 301 NN 302
NN
Sbjct: 114 NN 115
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 82
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 651 LGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVRL 704
+G G +G VY+ L D G ++A+K++ + + KN+ E+ + + H N+VRL
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV-LQDKRFKNR---ELQIMRKLDHCNIVRL 83
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 260 IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSE--NLQ 317
+P+ I L NL+ LDLS N LT +P L + L Y + +N ++ TLP + NLQ
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ 319
Query: 318 NIDLSYNHLSGPF 330
+ + N L F
Sbjct: 320 FLGVEGNPLEKQF 332
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 17/95 (17%)
Query: 266 ELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKS--ENLQNIDLSY 323
+L NLQ ++S N +F D L L+L NSL+ LP + NL+ +DLS+
Sbjct: 230 DLSNLQIFNISAN---------IFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279
Query: 324 NHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFP 358
N L+ P+ + S Q+ F F + ++ P
Sbjct: 280 NRLTS-LPAELGSCFQLKY----FYFFDNMVTTLP 309
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 4 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 61 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 95
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 649 NKLGEGGYGPVYKGTLSDGRVIAVKQLSIA--SHQGKNQFVNEIATISAVQHRNLVRLYG 706
++G G +G VYKG +AVK L++ + Q F NE+ + +H N++ G
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 25/145 (17%)
Query: 166 STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQGPIPXXXXXXXXXXXX 225
S F L N+ L S H + L L++ GNSFQ
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF------------- 461
Query: 226 RISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIP 285
+ DI+ L+NL L L + P+ L +LQ L+++ N L +P
Sbjct: 462 -LPDIF---------TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKS-VP 510
Query: 286 RTLFN-IDSLNYLFLGNNSLSGTLP 309
+F+ + SL ++L N + P
Sbjct: 511 DGIFDRLTSLQKIWLHTNPWDCSCP 535
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 637 ELRSATKDFDPSNKLGEGGYGPVYKGTLSD-GRVIAVKQLSIASHQGKNQFVNEIATISA 695
+L S D P LG GG G V+ +D + +A+K++ + Q + EI I
Sbjct: 8 DLGSRYMDLKP---LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 696 VQHRNLVRLY 705
+ H N+V+++
Sbjct: 65 LDHDNIVKVF 74
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 6 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 62
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 63 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 97
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 648 SNKLGEGGYGPVYKGTLSDGRVI-AVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
N +G G +G V R+ A K++ + ++F EI + ++ H N++RLY
Sbjct: 14 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGHLTEKA 736
+ D YL E G L E+
Sbjct: 74 TFEDNT------DIYLVMELCTGGELFERV 97
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 14/101 (13%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSDGRV----IAVKQLSIA-SHQGKNQFVNEIATISAV 696
+D+D LGEG YG V L+ RV +AVK + + + EI +
Sbjct: 5 VEDWDLVQTLGEGAYGEV---QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML 61
Query: 697 QHRNLVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKAD 737
H N+V+ YG EG + YL EY G L ++ +
Sbjct: 62 NHENVVKFYGHRREGNIQ------YLFLEYCSGGELFDRIE 96
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 7/90 (7%)
Query: 648 SNKLGEGGYGPVYKGTLSDGRVI-AVKQLSIASHQGKNQFVNEIATISAVQHRNLVRLYG 706
N +G G +G V R+ A K++ + ++F EI + ++ H N++RLY
Sbjct: 31 ENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 707 CCIEGARRLLVYDGYLAPEYAMRGHLTEKA 736
+ D YL E G L E+
Sbjct: 91 TFEDNT------DIYLVMELCTGGELFERV 114
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQGKNQ-FVNEIATISAV-QHRNLV 702
LG G +G V + T SD + +AVK L ++H + + ++E+ +S + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 91 NLLGACTIGGPTLVI------TEYCCYGDL 114
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQGKNQ-FVNEIATISAV-QHRNLV 702
LG G +G V + T SD + +AVK L ++H + + ++E+ +S + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 107 NLLGACTIGGPTLVI------TEYCCYGDL 130
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 642 TKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA 695
+ ++D +LG+G + V + G ++I K+LS Q + E
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 84
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD 719
+QH N+VRL+ E + LV+D
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFD 108
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQGKNQ-FVNEIATISAV-QHRNLV 702
LG G +G V + T SD + +AVK L ++H + + ++E+ +S + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 109 NLLGACTIGGPTLVI------TEYCCYGDL 132
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
Y+APE R T+ AD +SFGV+ E+++G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
Y+APE R T+ AD +SFGV+ E+++G
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
Y+APE R T+ AD +SFGV+ E+++G
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQGKNQ-FVNEIATISAV-QHRNLV 702
LG G +G V + T SD + +AVK L ++H + + ++E+ +S + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 114 NLLGACTIGGPTLVI------TEYCCYGDL 137
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 651 LGEGGYGPVYKGT------LSDGRVIAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVR 703
+GEG +G V++ ++AVK L AS + F E A ++ + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 704 LYGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
L G C G L++ EY G L E
Sbjct: 115 LLGVCAVGKPMCLLF------EYMAYGDLNE 139
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 166 STFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGNSFQ-GPIPXXXXXXXXXXX 224
S F LH +++L S + L L LQGNSFQ G I
Sbjct: 418 SPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSI------------ 465
Query: 225 XRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQI 284
+ + + V S ++S NL LS+ G L+N+ LDLS N+LTG
Sbjct: 466 SKTNLLQMVGSLEILILSSCNL--LSIDQQAFHG--------LRNVNHLDLSHNSLTGDS 515
Query: 285 PRTLFNIDSLNYLFLGNNSLS----GTLPTQKSENLQNIDLSYNHLSGP-----FPSWVT 335
L ++ L YL + +N++ LP +++ I+LS+N L F +W
Sbjct: 516 MDALSHLKGL-YLNMASNNIRIIPPHLLPALSQQSI--INLSHNPLDCTCSNIHFITWYK 572
Query: 336 SSLQ 339
+L
Sbjct: 573 ENLH 576
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 642 TKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA 695
+ ++D +LG+G + V + G ++I K+LS Q + E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD 719
+QH N+VRL+ E + LV+D
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFD 85
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 651 LGEGGYGPVYKGTL-----SDGRV-IAVKQLSIASHQGKNQ-FVNEIATISAV-QHRNLV 702
LG G +G V + T SD + +AVK L ++H + + ++E+ +S + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 703 RLYGCCIEGARRLLVYDGYLAPEYAMRGHL 732
L G C G L++ EY G L
Sbjct: 114 NLLGACTIGGPTLVI------TEYCCYGDL 137
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 61/168 (36%), Gaps = 24/168 (14%)
Query: 147 LAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGN 206
L KLE LY+ S E+P K +Q LR + T ++ + L N
Sbjct: 99 LVKLERLYL-SKNQLKELPEKMPK--TLQELRVHENEITKVRKSVFNGLNQMIVVELGTN 155
Query: 207 ----------SFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALI 256
+FQG RI+D + SL +L L I
Sbjct: 156 PLKSSGIENGAFQG--------MKKLSYIRIADTNITTIPQGLPPSLT---ELHLDGNKI 204
Query: 257 TGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
T + + L NL L LSFN+++ +L N L L L NN L
Sbjct: 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
L L+N IT L+NL TL L N ++ P + L L+L N L L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-EL 115
Query: 309 PTQKSENLQNIDLSYNHLSGPFPSWVTSSLQM---NLAVNNFTFDGSNISVFPGLQCL 363
P + + LQ + + N ++ S QM L N G F G++ L
Sbjct: 116 PEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 49/104 (47%), Gaps = 5/104 (4%)
Query: 626 IESKPNTFSYAELRSATKDFDPSNKLGEGGYGPVY----KGTLSDGRVIAVKQLSIASHQ 681
+++ P F ++ ++ + KLG G YG V K T + + +++ S+++
Sbjct: 20 LQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-S 78
Query: 682 GKNQFVNEIATISAVQHRNLVRLYGCCIEGARRLLVYDGYLAPE 725
++ + E+A + + H N+++LY + LV + Y E
Sbjct: 79 SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGE 122
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 61/168 (36%), Gaps = 24/168 (14%)
Query: 147 LAKLEELYIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNWTKLTALRLQGN 206
L KLE LY+ S E+P K +Q LR + T ++ + L N
Sbjct: 99 LVKLERLYL-SKNQLKELPEKMPK--TLQELRVHENEITKVRKSVFNGLNQMIVVELGTN 155
Query: 207 ----------SFQGPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALI 256
+FQG RI+D + SL +L L I
Sbjct: 156 PLKSSGIENGAFQG--------MKKLSYIRIADTNITTIPQGLPPSLT---ELHLDGNKI 204
Query: 257 TGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSL 304
T + + L NL L LSFN+++ +L N L L L NN L
Sbjct: 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 4/118 (3%)
Query: 249 LSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTL 308
L L+N IT L+NL TL L N ++ P + L L+L N L L
Sbjct: 57 LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-EL 115
Query: 309 PTQKSENLQNIDLSYNHLSGPFPSWVTSSLQM---NLAVNNFTFDGSNISVFPGLQCL 363
P + + LQ + + N ++ S QM L N G F G++ L
Sbjct: 116 PEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKL 173
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 643 KDFDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFV-NEIATISAVQHRN 700
K F+ LG G + V + G++ AVK + + +GK + NEIA + ++H N
Sbjct: 22 KIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 701 LVRL 704
+V L
Sbjct: 82 IVAL 85
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 642 TKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA 695
+ ++D +LG+G + V + G ++I K+LS Q + E
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 61
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD 719
+QH N+VRL+ E + LV+D
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFD 85
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 642 TKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA 695
+ ++D +LG+G + V + G ++I K+LS Q + E
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQ---KLEREARICRK 60
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD 719
+QH N+VRL+ E + LV+D
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFD 84
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 642 TKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATISA 695
T+++ +LG+G + V + G +I K+LS HQ + E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRL 66
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD 719
++H N+VRL+ E L++D
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFD 90
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 645 FDPSNKLGEGGYGPVYKGTLSDGR---VIAVKQLSIASHQGKNQFV-NEIATISAVQHRN 700
F ++G+G +G V+KG D R V+A+K + + + + + + EI +S
Sbjct: 25 FTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 701 LVRLYGCCIEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
+ + YG ++G++ ++ + YL A+ D F + E++ G
Sbjct: 83 VTKYYGSYLKGSKLWIIME-YLGGGSALDLLRAGPFDEFQIATMLKEILKG 132
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISGR-ANSD 756
++APE + KAD++S G+ A+E+ G NSD
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSD 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 9/84 (10%)
Query: 642 TKDFDPSNKLGEGGYGPVYKGTLSD------GRVIAVKQLSIASHQGKNQFVNEIATISA 695
T D+ +LG+G + V + ++I K+LS HQ + E
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRL 86
Query: 696 VQHRNLVRLYGCCIEGARRLLVYD 719
++H N+VRL+ E LV+D
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFD 110
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 262 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDL 321
S I LQ+++TLDL+ +T P L + +L L+L N ++ P NLQ + +
Sbjct: 107 SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSI 164
Query: 322 SYNHLSGPFPSWVTSSLQMNLAVNNFTFDGSNISVFPGL 360
N ++ P S L A +N D S ++ P L
Sbjct: 165 GNNQVNDLTPLANLSKLTTLRADDNKISDISPLASLPNL 203
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 246 LKDLSLRNALITGTIPSGIGELQNLQTLDLSFNNLTGQIPRTLFN-IDSLNYLFLGNNSL 304
+K L L N I +IP + LQ LQ L+++ N L +P +F+ + SL Y++L +N
Sbjct: 452 VKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPW 509
Query: 305 SGTLP 309
T P
Sbjct: 510 DCTCP 514
>pdb|2JI4|A Chain A, Human Phosphoribosylpyrophosphate Synthetase - Associated
Protein 41 (Pap41)
Length = 379
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 244 KNLKDLSLRNALITGTIPSGIGELQ--NLQTLDLSFNNLTGQIPRTLFNIDSLNYLF 298
+ +++ ++ ++T TIP + +LQ ++T+D+S + + R + N +S++YLF
Sbjct: 318 RRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISM--ILSEAIRRIHNGESMSYLF 372
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 640 SATKDFDPSNKLGEGGYGPVYK------GTLSDGRVIAVKQLSIASHQGKNQFVNEIATI 693
S T ++ +G+G + V + G ++I K+LS HQ + E
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 694 SAVQHRNLVRLYGCCIEGARRLLVYD 719
++H N+VRL+ E LV+D
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFD 83
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 645 FDPSNKLGEGGYGPVYKGT-LSDGRVIAVKQLSIASHQGKNQFVNEIATISAVQHRNLVR 703
+D +LG G +G V++ + GRV K ++ K NEI+ ++ + H L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 704 LYGCCIEGARRLLVYD----GYLAPEYAMRGHLTEKADVFSFGVVALE 747
L+ + +L+ + G L A + +A+V ++ A E
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACE 160
>pdb|2K46|A Chain A, Xenopus Laevis Malectin Complexed With Nigerose
(Glcalpha1- 3glc)
pdb|2KR2|A Chain A, Xenopus Laevis Malectin Complexed With Maltose
(Glcalpha1-4glc)
Length = 190
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 447 LYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWESLGTRVFDIYIQGTLR 506
LYQT R S Y E G Y + L FAE +VFD+ + G
Sbjct: 60 LYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFAQSQQ--------KVFDVRVNGHTV 111
Query: 507 WKDFDISKEAG 517
KD DI G
Sbjct: 112 VKDLDIFDRVG 122
>pdb|2JWP|A Chain A, Malectin
Length = 174
Score = 30.4 bits (67), Expect = 4.0, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
Query: 447 LYQTSRITPGSLRYYGLGLENGPYKVSLLFAETSILDRSTERWESLGTRVFDIYIQGTLR 506
LYQT R S Y E G Y + L FAE +VFD+ + G
Sbjct: 56 LYQTERYNEDSFGYDIPIKEEGEYVLVLKFAEVYFAQSQQ--------KVFDVRVNGHTV 107
Query: 507 WKDFDISKEAG 517
KD DI G
Sbjct: 108 VKDLDIFDRVG 118
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 30.4 bits (67), Expect = 4.3, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
YL+PE A + ++DV+S G V EV++G
Sbjct: 202 YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQL--SIASHQGKNQF---VNEIATISAVQHRNLVRL 704
LG G +G V+KG + +G I + I G+ F + + I ++ H ++VRL
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 705 YGCC 708
G C
Sbjct: 99 LGLC 102
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
Y+APE +RG EK DV+S GV+ ++SG
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
Y+APE +RG EK DV+S GV+ ++SG
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
Y+APE +RG EK DV+S GV+ ++SG
Sbjct: 189 YIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 651 LGEGGYGPVYKGT-LSDGRVIAVKQL--SIASHQGKNQF---VNEIATISAVQHRNLVRL 704
LG G +G V+KG + +G I + I G+ F + + I ++ H ++VRL
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 705 YGCC 708
G C
Sbjct: 81 LGLC 84
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 242 SLKNLKDLSLRNALITGTIPSGI-GELQNLQTLDLSFNNLTGQIPRTLFN-IDSLNYLFL 299
SL NLK+L L + + G +P G+ L L LDL N LT +P +F+ + L LF+
Sbjct: 62 SLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFM 119
Query: 300 GNNSLSGTLP--TQKSENLQNIDLSYNHL 326
N L+ LP ++ +L ++ L N L
Sbjct: 120 CCNKLT-ELPRGIERLTHLTHLALDQNQL 147
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
YL+PE A + ++DV+S G V EV++G
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 262 SGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQKSENLQNIDL 321
+G+ L L++L L N +T L + L+ L L +N +S +P LQN+ L
Sbjct: 125 NGLVHLPQLESLYLGNNKITDIT--VLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYL 182
Query: 322 SYNHLS 327
S NH+S
Sbjct: 183 SKNHIS 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 30.0 bits (66), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
YL+PE A + ++DV+S G V EV++G
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
YL+PE A + ++DV+S G V EV++G
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 5/173 (2%)
Query: 145 GNLAKLEEL-YIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNW---TKLTA 200
N LEEL ++D ++ + + F+ +++ L D +T DF G + T L
Sbjct: 388 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 447
Query: 201 LRLQGNSFQ-GPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGT 259
L++ GNSF+ + +S S +L L+ L++ + +
Sbjct: 448 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 507
Query: 260 IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK 312
S +L +L TLD SFN + SL + L NNS++ QK
Sbjct: 508 DSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQK 560
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
YL+PE A + ++DV+S G V EV++G
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 5/173 (2%)
Query: 145 GNLAKLEEL-YIDSCGASGEIPSTFAKLHNMQILRASDAHFTGKIPDFIGNW---TKLTA 200
N LEEL ++D ++ + + F+ +++ L D +T DF G + T L
Sbjct: 393 ANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNT 452
Query: 201 LRLQGNSFQ-GPIPXXXXXXXXXXXXRISDIYFVSSSLDFVMSLKNLKDLSLRNALITGT 259
L++ GNSF+ + +S S +L L+ L++ + +
Sbjct: 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFL 512
Query: 260 IPSGIGELQNLQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSGTLPTQK 312
S +L +L TLD SFN + SL + L NNS++ QK
Sbjct: 513 DSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQK 565
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 721 YLAPEYAMRGHLTEKADVFSFGVVALEVISG 751
YL+PE A + ++DV+S G V EV++G
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 651 LGEGGYGPVYKGT-LSDGR----VIAVKQLSI-ASHQGKNQFVNEIATISAVQHRNLVRL 704
LG G +G VYKG + DG +A+K L S + + ++E ++ V + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 705 YGCCIEGARRLLVYDGYLAPEYAMRGHLTE 734
G C+ +L+ L P + H+ E
Sbjct: 85 LGICLTSTVQLVT---QLMPYGCLLDHVRE 111
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 709 IEGARRLLVYDGYLAPEYAMRGHLTEKADVFSFGVVALEVIS 750
+ G RL V ++APE G T K+DV+S+G++ E+ S
Sbjct: 230 VRGNARLPV--KWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 270 LQTLDLSFNNLTGQIPRTLFNIDSLNYLFLGNNSLSG-TLPTQKSENLQNIDLSYNHL 326
L +DLS+N L + + L L++ NN L L Q L+ +DLS+NHL
Sbjct: 256 LVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHL 313
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,875,415
Number of Sequences: 62578
Number of extensions: 1045017
Number of successful extensions: 3659
Number of sequences better than 100.0: 538
Number of HSP's better than 100.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 397
Number of HSP's that attempted gapping in prelim test: 2784
Number of HSP's gapped (non-prelim): 1043
length of query: 905
length of database: 14,973,337
effective HSP length: 108
effective length of query: 797
effective length of database: 8,214,913
effective search space: 6547285661
effective search space used: 6547285661
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)