BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002583
(904 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P36428|SYA_ARATH Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3
Length = 1003
Score = 1496 bits (3873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 736/903 (81%), Positives = 818/903 (90%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQYKPIFLGTADPNT+LSKL+RACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 100 MNQYKPIFLGTADPNTELSKLSRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 159
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDYFK EAIEWAWELLTKVY LP DR+YATYFGGDEKAGL PDNEARDIWLK LP+ RV
Sbjct: 160 FGDYFKKEAIEWAWELLTKVYGLPTDRIYATYFGGDEKAGLQPDNEARDIWLKVLPSGRV 219
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES 180
LPFGCKDNFWEMGDTGPCGPC+EIHYDR GNRDAASLVNNDDPTC+EIWN+VFIQFNRES
Sbjct: 220 LPFGCKDNFWEMGDTGPCGPCTEIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRES 279
Query: 181 DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD 240
DGSLKPLPAKHVDTG+GFERLTS+LQNKMSNYDTDVFMPIFD IQ+ATGARPYSGKVG +
Sbjct: 280 DGSLKPLPAKHVDTGMGFERLTSVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPE 339
Query: 241 DADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFF 300
D D+VDMAYRVVADHIRTLSFAIADGS PGNEGREYVLRRILRRAVRYG E+LKA++GFF
Sbjct: 340 DVDRVDMAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGKEILKAEEGFF 399
Query: 301 NGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVLS 360
NGLV+ V++VMGDVF ELK+ E I +II EEASF KTL KGIEKF+KA Q VQG LS
Sbjct: 400 NGLVSSVIRVMGDVFTELKEHEKKITDIIKEEEASFCKTLAKGIEKFRKAGQAVQGNTLS 459
Query: 361 GQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVMD 420
G DAFILWDTYGFPLDLTQLMAEERGLLVD++GFN AM+EARERSRSAQNKQAGGAIVMD
Sbjct: 460 GDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMD 519
Query: 421 ADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIVLASSSFY 480
ADAT+ LHK GV ATDDSFK+IWFQDH+S +KAIYTGS F+ES + VG+VL S+SFY
Sbjct: 520 ADATSTLHKAGVSATDDSFKYIWFQDHESELKAIYTGSTFLESSAASDNVGLVLGSTSFY 579
Query: 481 AEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICKVDYDRR 540
AEQGGQIFD G IEG FG+F V NVQI+GGFV+HIG L++ G SVG++VICKVDY+RR
Sbjct: 580 AEQGGQIFDTGLIEGSFGTFNVCNVQIFGGFVLHIGYLSKETGEVSVGDKVICKVDYERR 639
Query: 541 KLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRRIESIVN 600
KLIAPNHTCTHMLN+AL+EVLGDH+DQKGS+VLPEKLRFDFSHGKPVDPE LRRIESIVN
Sbjct: 640 KLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESIVN 699
Query: 601 EQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPENKEWLS 660
+QIK ELDVFSKEA L+EAK I GLRAVFGEVYPDPVRVV+IGRKVEDLLADPEN EW
Sbjct: 700 KQIKDELDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSL 759
Query: 661 ISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLEKEVDDA 720
+S+E CGGTH++NTREA+AFALLSEEGIAKGIRR+TAVTT A+ A AA LE+EV+DA
Sbjct: 760 LSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREVEDA 819
Query: 721 SKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEENLQKAVK 780
S+ EGS LEK V++LKS+VD A IPA KKADIR KIA LQN+VRKAQKK+AE+NL+K+VK
Sbjct: 820 SRAEGSALEKKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIAEQNLKKSVK 879
Query: 781 VATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVC 840
+ATE AE+AAS+GK FCI +++VGLDAAAVREAV KV+E+KGM +MVFSTDE+TNKAVVC
Sbjct: 880 LATEAAESAASDGKTFCIIQLDVGLDAAAVREAVSKVMEKKGMSIMVFSTDESTNKAVVC 939
Query: 841 AGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAA 900
AGVPEKSDQ K L+V+EWLT AL PLKGRCGKGKGGLASGQGTDA+QV A+D+A+ FA+
Sbjct: 940 AGVPEKSDQFKPLDVTEWLTTALGPLKGRCGKGKGGLASGQGTDASQVQAALDMASSFAS 999
Query: 901 MKL 903
MKL
Sbjct: 1000 MKL 1002
>sp|Q54Y20|SYAC_DICDI Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=alaS PE=2 SV=1
Length = 946
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/906 (50%), Positives = 602/906 (66%), Gaps = 12/906 (1%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFLG +P ++ +KL RA N+QKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS
Sbjct: 43 MNQFKPIFLGQVNPKSEQAKLKRAVNSQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 102
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FG+YFK EAI WAWELLT+VY+L +RLY TYF GD + GL D EA+++WL++LP RV
Sbjct: 103 FGNYFKKEAITWAWELLTEVYKLDKERLYVTYFRGDPEKGLEADLEAKNLWLQYLPEERV 162
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES 180
LPFG K+NFWEMGD GPCGPCSEIHYD+ RD AS VN DDPT IEIWN+VFIQ+NRE+
Sbjct: 163 LPFGMKENFWEMGDQGPCGPCSEIHYDKVEGRDGASFVNADDPTLIEIWNLVFIQYNREA 222
Query: 181 DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATG-ARPYSGKVGA 239
D SL+PLP KHVDTG+G ERLTSI+Q +NYDTDVFMPIF AIQ+ TG PY GKVGA
Sbjct: 223 DKSLRPLPQKHVDTGMGLERLTSIIQKVPTNYDTDVFMPIFAAIQEVTGYPEPYGGKVGA 282
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
+D +VDMAYRV+ADHIRTL+F+IADG+ P +GR VLRRILRRAVRYG + L A GF
Sbjct: 283 EDTQQVDMAYRVIADHIRTLTFSIADGAAPSVDGRGQVLRRILRRAVRYGKQKLNAPAGF 342
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVL 359
F+ LV++V+ G+ FPEL+++ HI+ ++ EE F KTL KGI +F+K + L
Sbjct: 343 FSKLVDVVIANFGEFFPELRKKPEHIKMVLTREEDMFNKTLEKGIVEFEKMIKKSVNNTL 402
Query: 360 SGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGAIVM 419
S ++A+ L YGFP+DLT +MAEE+ VDI+G+ + E R Q K+ + +
Sbjct: 403 SAENAYFLSTCYGFPIDLTTIMAEEKNYKVDIKGYEGLCEAQSEIDRKRQ-KEKKVELTL 461
Query: 420 DADATAALHKRGVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVVPGNEVGIVLASS 477
A+A A L + TDDSFK ++ H +SVIKAI+ G EF+++ G +G+VL +S
Sbjct: 462 GAEANAWLKNNDIKPTDDSFK---YKQHEIQSVIKAIWNGKEFVDTAPKGTLIGVVLENS 518
Query: 478 SFYAEQGGQIFDEG---FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVICK 534
+FYAEQGGQI+D G FI+ +F V++ +++GG+V+HIG L+ VG+ V
Sbjct: 519 NFYAEQGGQIYDIGQLSFIDDQKTAFDVKDCKVFGGYVLHIGYLSYECDSLKVGDRVELT 578
Query: 535 VDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLRR 594
VDY RR I NHT THM+N+AL+ +LGD +DQ+GS V ++ RFDFS G+ + + L +
Sbjct: 579 VDYTRRSPIMSNHTSTHMVNYALKNILGDGIDQRGSFVDAQRFRFDFSFGRAITKDELIK 638
Query: 595 IESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADPE 654
I+ IVN+QI +LDV +KE LA AK INGLRAVFGEVYPDPVRVV++G VE L+ +P
Sbjct: 639 IDQIVNDQIFKQLDVHAKEVGLASAKKINGLRAVFGEVYPDPVRVVSVGVPVEQLIENPT 698
Query: 655 NKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSLE 714
N EW + S E CGGTHLSNT++AE F + SEE + G+RRI AVT A A E LE
Sbjct: 699 NPEWANYSIEFCGGTHLSNTKQAELFTITSEETLGAGVRRIVAVTGSEAASAIELNKELE 758
Query: 715 KEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKVAEEN 774
++A K+ GS L K + SL + I A + ++ + +Q RK K+
Sbjct: 759 VRFNNALKLSGSELAKEIVSLLDLLKVVTISASVRMNLVETLKEVQALQRKQVKEQETIL 818
Query: 775 LQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP-VMVFSTDET 833
Q+A +T+E A + + V + + E + K+ + M +M+ S DE
Sbjct: 819 AQQAQTYLEKTSEELAKSQPKVFVDLVNFNSNTPLITETIKKIQTKSPMTAIMLISPDEE 878
Query: 834 TNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTPAMD 893
K VP+ S+ SK L + W+ + L G GK +A G G+ ++ A+
Sbjct: 879 KGKVTCIGIVPKDSEISKTLTANAWVVKVTEVLG-GKGGGKVDVAQGVGSKLDKIDEAIL 937
Query: 894 LAAEFA 899
++ EFA
Sbjct: 938 VSREFA 943
>sp|Q5A8K2|SYA_CANAL Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ALA1 PE=1 SV=1
Length = 969
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/913 (49%), Positives = 593/913 (64%), Gaps = 18/913 (1%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQYKPIFLGT DP + + L RA N+QKCIRAGGKHNDL+DVG+D+YHHTFFEMLGNWS
Sbjct: 65 MNQYKPIFLGTVDPASDFASLKRAANSQKCIRAGGKHNDLEDVGRDSYHHTFFEMLGNWS 124
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK EAI+++WELLTKVY L DRLY TYFGGDEK GL PD EA++ WLK +P
Sbjct: 125 FGDYFKKEAIDYSWELLTKVYGLQEDRLYVTYFGGDEKQGLEPDLEAKNFWLKVGVPEDH 184
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP +DNFWEMGD GPCGPCSEIHYDR G R+A++LVN DDP +E+WN+VFIQ+NRE
Sbjct: 185 ILPGSVEDNFWEMGDQGPCGPCSEIHYDRIGGRNASALVNMDDPNVLEVWNVVFIQYNRE 244
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
+DG+L+ LP KH+DTG+GFERL SILQNK SNYDTDVF+PIFD I++ TG RPY+GK G
Sbjct: 245 ADGNLRTLPNKHIDTGMGFERLVSILQNKYSNYDTDVFLPIFDKIREITGVRPYTGKFGN 304
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQ-DG 298
+D D +D AYRV+ADH+RTL+FAI DG P NEGR YVLRRILRR RY + + G
Sbjct: 305 EDKDGIDTAYRVIADHVRTLTFAICDGGVPNNEGRGYVLRRILRRGSRYVRKYMNYPIGG 364
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQ 355
FF LV++V++ ++FPE+ ++EI+ EE SF KTL +G E++ A
Sbjct: 365 FFQQLVDVVIEQNKEIFPEISSGAQDLKEILNEEELSFAKTLDRGEKLFEQYAIIASKTP 424
Query: 356 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 415
+ LSG+D + L+DTYGFP+DLT+LMAEE GL +D EGF A +E+RE S+ + K
Sbjct: 425 EQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESREASKGSGTKDGKT 484
Query: 416 AIVMDADATAALHKRGVLA-TDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIV 473
+ +D A + L + + T+D FK+ ++ K+ + IY GS+F++S+ P + GI+
Sbjct: 485 LVKLDVHALSELDQNDAIPKTNDEFKY-GLENVKAKVVGIYDGSKFVDSIEDPSIQYGIL 543
Query: 474 LASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEV 531
L + FYAEQGGQ +D G I+G F V NVQ+Y G+V+H G++ + G+ +VG+E+
Sbjct: 544 LDKTPFYAEQGGQEYDTGKLVIDGK-SEFNVANVQVYAGYVLHTGNIVD--GKLNVGDEI 600
Query: 532 ICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEH 591
I D RR I NHT TH+LNFALREVLGD VDQKGS+V PEKLRFDFSH + V +
Sbjct: 601 IATYDELRRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAVTAKE 660
Query: 592 LRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLA 651
L +IE+I N+ IK V+ K+ +L +AK INGLRAVFGE YPDPVRVV+IG V+DLLA
Sbjct: 661 LEKIEAISNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVDDLLA 720
Query: 652 DPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAAC 711
DP N +W IS E CGGTH++ T + + ++ E GIAKGIRRI AVT A+ + A
Sbjct: 721 DPTNTKWHEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGHDAHHVQKVAN 780
Query: 712 SLEKEVDDASKIE-GSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQKKV 770
E+E+D+AS + G E L + +I K + K L ++ K
Sbjct: 781 EFEQEIDNASSLPFGVAKESKSKELGVALKKLSISVLDKQRLTEKFNKLDKSIKDNLKAK 840
Query: 771 AEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVFST 830
+E +K + V N F ++ V + +A A+ EA+ + +Q + T
Sbjct: 841 QKEETKKTLDVVNNWLN-DKENASSFLVAHVPITANAKAITEAINLIKKQDKTKSIYLLT 899
Query: 831 DETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDAAQVTP 890
ET A C E +K + +E A + + G+ G GKG + G G +
Sbjct: 900 GETDKVAHGCYVSDEAI--AKGINANELAKAVSENIGGKAG-GKGNIVQGMGDKPQGINT 956
Query: 891 AMDLAAEFAAMKL 903
A++ + KL
Sbjct: 957 AIEEVTKLFKEKL 969
>sp|P40825|SYA_YEAST Alanine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ALA1 PE=1 SV=3
Length = 983
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/825 (52%), Positives = 557/825 (67%), Gaps = 19/825 (2%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQYKPIFLGT DP + L RA N+QKCIRAGGKHNDL+DVGKD+YHHTFFEMLGNWS
Sbjct: 75 MNQYKPIFLGTVDPASDFYTLKRAYNSQKCIRAGGKHNDLEDVGKDSYHHTFFEMLGNWS 134
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK EAI ++W LLT+VY +P DRLY TYF GDEK GL PD EAR++W +P
Sbjct: 135 FGDYFKKEAITYSWTLLTEVYGIPKDRLYVTYFEGDEKLGLEPDTEARELWKNVGVPDDH 194
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMGD GPCGPCSEIHYDR G R+AASLVN DDP +E+WN+VFIQFNRE
Sbjct: 195 ILPGNAKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNMDDPDVLEVWNLVFIQFNRE 254
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
DGSLKPLPAKH+DTG+GFERL S+LQ+ SNYDTDVF P+F+ IQ+ T RPYSG G
Sbjct: 255 QDGSLKPLPAKHIDTGMGFERLVSVLQDVRSNYDTDVFTPLFERIQEITSVRPYSGNFGE 314
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG- 298
+D D +D AYRV+ADH+RTL+FA+ADG P NEGR YVLRRILRR RY + + G
Sbjct: 315 NDKDGIDTAYRVLADHVRTLTFALADGGVPNNEGRGYVLRRILRRGARYARKYMNYPIGN 374
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQ 355
FF+ L ++ + D+FPEL + A + EI+ EEASF KTL +G EK+ AA +
Sbjct: 375 FFSTLAPTLISQVQDIFPELAKDPAFLFEILDEEEASFAKTLDRGERLFEKYASAASKTE 434
Query: 356 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 415
K L G+ + L+DTYGFP+DLT+LMAEE+GL +D GF A E+ E S+ K
Sbjct: 435 SKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQESYEASKRGGKKDQSD 494
Query: 416 AIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV-PGNEVGIVL 474
I ++ + L+ V T+D FK+ +++K ++ G+ F++ + PG + GI+L
Sbjct: 495 LIKLNVHELSELNDAKVPKTNDEFKYGSANVEGTILK-LHDGTNFVDEITEPGKKYGIIL 553
Query: 475 ASSSFYAEQGGQIFDEG-FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVIC 533
+ FYAEQGGQ +D G + F V NVQ+Y GFV H GSL E G+ SVG+++I
Sbjct: 554 DKTCFYAEQGGQEYDTGKIVIDDAAEFNVENVQLYNGFVFHTGSLEE--GKLSVGDKIIA 611
Query: 534 KVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHLR 593
D RR I NHT TH+LNFAL+E LG+ VDQKGS+V PEKLRFDFSH K V E L+
Sbjct: 612 SFDELRRFPIKNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELK 671
Query: 594 RIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLADP 653
++E I NEQIK L VF KE L AK I+G+RAVFGE YPDPVRVV++G+ +E+LLA+P
Sbjct: 672 KVEDICNEQIKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANP 731
Query: 654 ENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAACSL 713
N+EW S E CGGTH++ T + + F +L E GIAKGIRRI AVT A++A A
Sbjct: 732 ANEEWTKYSIEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQF 791
Query: 714 EKEVDDASKIEGS-LLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR-KAQKKVA 771
++D A K+ S + EK + L K+ +I K +++ K ++ V+ + + +
Sbjct: 792 AADLDAADKLPFSPIKEKKLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAK 851
Query: 772 EENLQKAVKVAT--ETAEAAASNGKPFCISRVEVGLDAAAVREAV 814
+EN Q +V T ET E A P+ + +++ +A A+ EA+
Sbjct: 852 KENKQTLDEVKTFFETNENA-----PYLVKFIDISPNAKAITEAI 891
>sp|P50475|SYAC_RAT Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Aars PE=1
SV=3
Length = 968
Score = 848 bits (2192), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/930 (48%), Positives = 596/930 (64%), Gaps = 39/930 (4%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFL T DP+ ++KL+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WS
Sbjct: 46 MNQFKPIFLNTVDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWS 105
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK A + A ELLT+ + +P +RLY TYFGGDE AGL PD E R IW L ++
Sbjct: 106 FGDYFKELACKMALELLTQEFGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEAK 165
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMGDTGPCGPCSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE
Sbjct: 166 ILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRE 225
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
SDG LKPLP K +DTG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA
Sbjct: 226 SDGVLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGA 285
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
+D D +DMAYRV+ADH RT++ A+ADG P N GR YVLRRILRRAVRY E L A GF
Sbjct: 286 EDTDGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGF 345
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKV 358
F LV++VV+ +GD FPELK+ +++II EE F KTL +G + Q + +
Sbjct: 346 FATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCQT 405
Query: 359 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-- 416
+ G A++L+DTYGFP+DLT L+AEE+GL+VD++GF A+ +S Q K AGG
Sbjct: 406 IPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDL 462
Query: 417 IVMDADATAALHKRGVLATDDSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPG 467
I++D A L +G+ ATDDS K+ + D + + A+ F++ VV G
Sbjct: 463 IMLDIYAIEELRAKGLEATDDSPKYNYHSDSSGSYVFECTVATVLALRREKMFVDEVVTG 522
Query: 468 NEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEG 521
E G+VL + FYAEQGGQIFDEG++ + S F V+N Q+ GG+V+HIG++
Sbjct: 523 QECGVVLDKTCFYAEQGGQIFDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY-- 580
Query: 522 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
G VG++V +D RR+ + NHT TH+LNFALR VLGD DQKGS+V P++LRFDF
Sbjct: 581 -GNLRVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLGD-ADQKGSLVAPDRLRFDF 638
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
+ + E +++ E IVN I+A V++ + LA AK I GLRAVF E YPDPVRVV+
Sbjct: 639 TAKGAMSTEQIKKTEEIVNGMIEAAKPVYTLDCPLAAAKAIQGLRAVFDETYPDPVRVVS 698
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
IG V +LL DP S E CGGTHL N+ A AF +++EE IAKGIRRI AVT
Sbjct: 699 IGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGA 758
Query: 702 LAYKAFEAACSLEKEVD------DASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAK 755
A KA + +L+K + A ++K +A L + A IP +K + R
Sbjct: 759 EAQKALRKSETLKKSLSAMEVKVKAQSAPNKDVQKEIADLGEVLATAVIPQWQKDEQRET 818
Query: 756 IALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASN-GKPFCISRVEVGLDAAAVREAV 814
+ L+ +V + ++ ++QK +V +T + SN +P I +E G A A+ EA+
Sbjct: 819 LKSLK-KVMDDLDRASKADVQK--RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEAL 875
Query: 815 -LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 873
L M+F+ D K VP+ + ++ L+ SEW+ + G+ G G
Sbjct: 876 KLFKTHSPQTSAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGG 933
Query: 874 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 903
K A G + + A+ LA FA ++L
Sbjct: 934 KDMSAQATGKNVGCLQEALQLATSFAQLRL 963
>sp|Q8CFX8|SYAC_MESAU Alanine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus GN=Aars
PE=2 SV=1
Length = 968
Score = 847 bits (2189), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/930 (48%), Positives = 596/930 (64%), Gaps = 39/930 (4%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFL T DP+ L+KL+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WS
Sbjct: 46 MNQFKPIFLNTIDPSHPLAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWS 105
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK A + A ELLT+ + +P +RLY TYFGGDE AGL PD E + IW L ++
Sbjct: 106 FGDYFKELACKMALELLTQEFAIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDAK 165
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMGDTGPCGPCSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE
Sbjct: 166 ILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRE 225
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
+DG LKPLP K +DTG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA
Sbjct: 226 TDGLLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGA 285
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
+DAD +DMAYRV+ADH RT++ A+ADG P N GR YVLRRILRRAVRY E L A GF
Sbjct: 286 EDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGF 345
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKV 358
F LV++VV+ +GD FPELK+ +++II EE F KTL +G + Q + K
Sbjct: 346 FATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKT 405
Query: 359 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-- 416
+ G A++L+DTYGFP+DLT L+AEE+GL+VD++GF A+ +S Q K AGG
Sbjct: 406 IPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDL 462
Query: 417 IVMDADATAALHKRGVLATDDSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPG 467
I++D A L +G+ ATDDS K+ + D + + A+ F+E VV G
Sbjct: 463 IMLDIYAIEELRAKGLEATDDSPKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTG 522
Query: 468 NEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEG 521
E G+VL + FYAEQGGQI+DEG++ + S F V+N Q+ GG+V+HIG++
Sbjct: 523 QECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY-- 580
Query: 522 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
G VG++V +D RR+ + NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF
Sbjct: 581 -GNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDF 638
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
+ + + ++ E IVN I+A V++++ LA AK I GLRAVF E YPDPVRVV+
Sbjct: 639 TAKGAMSTQQIKEAEEIVNAMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVS 698
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
IG V +LL DP S E CGGTHL N+ A AF +++EE IAKGIRRI AVT
Sbjct: 699 IGVPVSELLDDPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGA 758
Query: 702 LAYKAFEAACSLEKEVD------DASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAK 755
A KA A SL + + A +++ +A L + A IP +K + R
Sbjct: 759 EAQKALRKAESLRRSLSIMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRET 818
Query: 756 IALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASN-GKPFCISRVEVGLDAAAVREAV 814
+ L+ +V + ++ ++QK +V +T + SN +P I +E G A A+ EA+
Sbjct: 819 LKSLK-KVMDDLDRASKADVQK--RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEAL 875
Query: 815 -LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 873
L M+F+ D K VP+ + ++ L+ SEW+ + G+ G G
Sbjct: 876 KLFKTHSPQTSAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGG 933
Query: 874 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 903
K A G + + A+ LA FA ++L
Sbjct: 934 KDVSAQATGKNVGCLQEALQLATSFAQLRL 963
>sp|Q8BGQ7|SYAC_MOUSE Alanine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Aars PE=1 SV=1
Length = 968
Score = 847 bits (2187), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/930 (48%), Positives = 596/930 (64%), Gaps = 39/930 (4%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFL T DP+ ++KL+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WS
Sbjct: 46 MNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWS 105
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK A + A ELLT+ + +P +RLY TYFGGDE AGL PD E R IW L +R
Sbjct: 106 FGDYFKELACKMALELLTQEFGIPVERLYVTYFGGDEAAGLEPDLECRQIWQNLGLDEAR 165
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMGDTGPCGPCSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE
Sbjct: 166 ILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRE 225
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
SDG LKPLP K +DTG+G ERL S+LQNKMSNYDTD+FMP F+AIQ+ TGARPY+GKVGA
Sbjct: 226 SDGVLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFMPYFEAIQKGTGARPYTGKVGA 285
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
+DAD +DMAYRV+ADH RT++ A+ADG P N GR YVLRRILRRAVRY E L A GF
Sbjct: 286 EDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGF 345
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKV 358
F LV++VV+ +GD FPELK+ +++II EE F KTL +G + Q + K
Sbjct: 346 FATLVDVVVQSLGDAFPELKKDPEMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKT 405
Query: 359 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-- 416
+ G A++L+DTYGFP+DLT L+AEE+GL+VD+ GF +E R +Q K AG
Sbjct: 406 IPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFE---EERRLAQLKSQGKGAGDEDL 462
Query: 417 IVMDADATAALHKRGVLATDDSFKFIWFQDHK---------SVIKAIYTGSEFIESVVPG 467
I++D A L +G+ ATDDS K+ + D + + A+ F++ VV G
Sbjct: 463 IMLDIYAIEELRAKGLEATDDSPKYNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTG 522
Query: 468 NEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEG 521
E G+VL + FYAEQGGQI+DEG++ + S F V+N Q+ GG+V+HIG++
Sbjct: 523 QECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY-- 580
Query: 522 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
G VG++V +D RR+ + NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF
Sbjct: 581 -GNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDF 638
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
+ + + +++ E IVN I+A V++++ LA AK I GLRAVF E YPDPVRVV+
Sbjct: 639 TAKGAMSTQQIKKAEEIVNGMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVS 698
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
IG V +LL DP S E CGGTHL N+ A AF +++EE IAKGIRRI AVT
Sbjct: 699 IGVPVSELLDDPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGA 758
Query: 702 LAYKAFEAACSLEKEVD------DASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAK 755
A KA + +L+K + A +++ +A L + A IP +K + R
Sbjct: 759 EAQKALRKSETLKKSLSAMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRET 818
Query: 756 IALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASN-GKPFCISRVEVGLDAAAVREAV 814
+ L+ +V + ++ ++QK +V +T + SN +P I +E G A A+ EA+
Sbjct: 819 LKSLK-KVMDDLDRASKADVQK--RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEAL 875
Query: 815 -LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 873
L M+F+ D K VP+ + ++ L+ SEW+ + G+ G G
Sbjct: 876 KLFKTHSPQTSAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGG 933
Query: 874 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 903
K A G + + A+ LA FA ++L
Sbjct: 934 KDMSAQATGKNVGCLQEALQLATSFAQLRL 963
>sp|Q5RC02|SYAC_PONAB Alanine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=AARS PE=2 SV=1
Length = 968
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/930 (48%), Positives = 599/930 (64%), Gaps = 39/930 (4%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFL T DP+ ++K +RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WS
Sbjct: 46 MNQFKPIFLNTIDPSHPMAKPSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWS 105
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK A + A ELLT+ + +P +RLY TYFGGDE AGL PD E + IW L ++
Sbjct: 106 FGDYFKELACKMALELLTQEFGIPIERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDTK 165
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMGDTGPCGPCSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE
Sbjct: 166 ILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRE 225
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
+DG LKPLP K +DTG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA
Sbjct: 226 ADGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGA 285
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
+DAD +DMAYRV+ADH RT++ A+ADG P N GR YVLRRILRRAVRY E L A GF
Sbjct: 286 EDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGF 345
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKV 358
F LV++VV+ +GD FPELK+ +++II EE F KTL +G + Q + K
Sbjct: 346 FATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKT 405
Query: 359 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-- 416
+ G A++L+DTYGFP+DLT L+AEE+GL+VD++GF A+ +S Q K AGG
Sbjct: 406 IPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDL 462
Query: 417 IVMDADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPG 467
I++D A L R + TDDS K+ + F++ + + A+ F+E V G
Sbjct: 463 IMLDIYAIEELRARDLEVTDDSPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTG 522
Query: 468 NEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEG 521
E G+VL + FYAEQGGQI+DEG++ + S F V+N Q+ GG+V+HIG++
Sbjct: 523 QECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY-- 580
Query: 522 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
G VG++V +D RR+ I NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF
Sbjct: 581 -GDLKVGDQVWLFIDEPRRRPIMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDF 638
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
+ + + +++ E I NE I+A V++++ +LA AK I GLRAVF E YPDPVRVV+
Sbjct: 639 TAKGAMSTQQIKKAEEIANEMIEAAKPVYTQDCSLAAAKAIQGLRAVFDETYPDPVRVVS 698
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
IG V +LL DP S E CGGTHL N+ A AF +++EE IAKGIRRI AVT
Sbjct: 699 IGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGA 758
Query: 702 LAYKAFEAACSLEKEVD------DASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAK 755
A KA A SL+K + A +++ +A L + A IP +K ++R
Sbjct: 759 EAQKALRKAGSLKKPLSVMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRET 818
Query: 756 IALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASN-GKPFCISRVEVGLDAAAVREAV 814
+ L+ +V + ++ ++QK +V +T + SN +P I +E G A A+ EA+
Sbjct: 819 LKSLK-KVMDDLDRASKADVQK--RVLEKTKQLIDSNPNQPLVILEMESGASAKALNEAL 875
Query: 815 -LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 873
L + M+F+ D K VP+ + ++ L+ SEW+ + G+ G G
Sbjct: 876 KLFKMHSPQTAAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGG 933
Query: 874 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 903
K A G + + A+ LA FA ++L
Sbjct: 934 KDVSAQATGKNVGCLQEALQLATSFAQLRL 963
>sp|P49588|SYAC_HUMAN Alanine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
Length = 968
Score = 844 bits (2181), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/930 (48%), Positives = 599/930 (64%), Gaps = 39/930 (4%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFL T DP+ ++KL+RA NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLG+WS
Sbjct: 46 MNQFKPIFLNTIDPSHPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWS 105
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK A + A ELLT+ + +P +RLY TYFGGDE AGL D E + IW L ++
Sbjct: 106 FGDYFKELACKMALELLTQEFGIPIERLYVTYFGGDEAAGLEADLECKQIWQNLGLDDTK 165
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMGDTGPCGPCSEIHYDR G RDAA LVN DDP +EIWN+VFIQ+NRE
Sbjct: 166 ILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRE 225
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
+DG LKPLP K +DTG+G ERL S+LQNKMSNYDTD+F+P F+AIQ+ TGARPY+GKVGA
Sbjct: 226 ADGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGA 285
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
+DAD +DMAYRV+ADH RT++ A+ADG P N GR YVLRRILRRAVRY E L A GF
Sbjct: 286 EDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHEKLNASRGF 345
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDV-QGKV 358
F LV++VV+ +GD FPELK+ +++II EE F KTL +G + Q + K
Sbjct: 346 FATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDSKT 405
Query: 359 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-- 416
+ G A++L+DTYGFP+DLT L+AEE+GL+VD++GF A+ +S Q K AGG
Sbjct: 406 IPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKS---QGKGAGGEDL 462
Query: 417 IVMDADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYTGSEFIESVVPG 467
I++D A L RG+ TDDS K+ + F++ + + A+ F+E V G
Sbjct: 463 IMLDIYAIEELRARGLEVTDDSPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTG 522
Query: 468 NEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS------FYVRNVQIYGGFVIHIGSLTEG 521
E G+VL + FYAEQGGQI+DEG++ + S F V+N Q+ GG+V+HIG++
Sbjct: 523 QECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIY-- 580
Query: 522 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
G VG++V +D RR+ I NHT TH+LNFALR VLG+ DQKGS+V P++LRFDF
Sbjct: 581 -GDLKVGDQVWLFIDEPRRRPIMSNHTATHILNFALRSVLGE-ADQKGSLVAPDRLRFDF 638
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
+ + + +++ E I NE I+A V++++ LA AK I GLRAVF E YPDPVRVV+
Sbjct: 639 TAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVS 698
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
IG V +LL DP S E CGGTHL N+ A AF +++EE IAKGIRRI AVT
Sbjct: 699 IGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGA 758
Query: 702 LAYKAFEAACSLEKEVD------DASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAK 755
A KA A SL+K + A +++ +A L + A IP +K ++R
Sbjct: 759 EAQKALRKAESLKKCLSVMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRET 818
Query: 756 IALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASN-GKPFCISRVEVGLDAAAVREAV 814
+ L+ +V + ++ ++QK +V +T + SN +P I +E G A A+ EA+
Sbjct: 819 LKSLK-KVMDDLDRASKADVQK--RVLEKTKQFIDSNPNQPLVILEMESGASAKALNEAL 875
Query: 815 -LKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKG 873
L + M+F+ D K VP+ + ++ L+ SEW+ + G+ G G
Sbjct: 876 KLFKMHSPQTSAMLFTVDNEAGKITCLCQVPQNA-ANRGLKASEWVQQVSGLMDGK-GGG 933
Query: 874 KGGLASGQGTDAAQVTPAMDLAAEFAAMKL 903
K A G + + A+ LA FA ++L
Sbjct: 934 KDVSAQATGKNVGCLQEALQLATSFAQLRL 963
>sp|P21894|SYAC_BOMMO Alanine--tRNA ligase, cytoplasmic OS=Bombyx mori PE=1 SV=1
Length = 967
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/940 (47%), Positives = 592/940 (62%), Gaps = 56/940 (5%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFLG+ DPN+ +++ R NTQKCIRAGGKHNDLDDVGKD YHHTFFEM+GNWS
Sbjct: 46 MNQFKPIFLGSVDPNSDMAQYIRVVNTQKCIRAGGKHNDLDDVGKDVYHHTFFEMMGNWS 105
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK E WAWELLT V++L +RLY TYF GD +GL PD E R+IWL +P +
Sbjct: 106 FGDYFKKEICAWAWELLTDVFKLSRERLYVTYFEGDPSSGLEPDLECRNIWLNLGVPEAH 165
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMG+TGPCGPCSE+HYDR G+R+AA LVN DDP +EIWN+VFIQFNRE
Sbjct: 166 ILPGSMKDNFWEMGETGPCGPCSELHYDRIGDREAAHLVNMDDPDVLEIWNLVFIQFNRE 225
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
+DGSLK LP KH+D GLG ERL S++QNK +NYDTD FMPIF AI+ ATG RPYSGKVG
Sbjct: 226 TDGSLKLLPTKHIDCGLGLERLVSVIQNKRANYDTDFFMPIFKAIENATGVRPYSGKVGV 285
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
DD D +DMAYRV+ADH RTL+ A++DG CP N GR YVLRRILRRAVRY SE L A+ GF
Sbjct: 286 DDVDGIDMAYRVLADHARTLTIALSDGGCPDNTGRGYVLRRILRRAVRYASEKLNAKPGF 345
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQG-KV 358
F LV VV+++GDVFPE+K+ I +I EE F KTLL+G + + + K
Sbjct: 346 FGSLVYTVVELLGDVFPEIKKDPDSIVHVINEEEVQFLKTLLRGRNLLYRTIEKLNNSKT 405
Query: 359 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAG--GA 416
L G A+ L+DTYGFP+DLTQLM EE+GL VD+EG+ + E++ S Q K AG
Sbjct: 406 LPGDVAWRLYDTYGFPIDLTQLMCEEKGLNVDMEGYEKSRKESQLVS---QGKAAGQEDL 462
Query: 417 IVMDADATAALHKRGVLATDDSFKFIW------------FQDHKSVIKAIYTGSEFIESV 464
I +D A + L G+ ATDDS K+ + F + I A+ EF+ +
Sbjct: 463 IALDVHAISHLQDTGIPATDDSPKYNYLPSSTDKDALYTFAPCTAKIVALRKNKEFVSEI 522
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGF---IEGLFGSFYVRNVQIYGGFVIHIGSLTEG 521
G E G++L +SFYAEQGGQIFDEG+ I+ F V+NVQ+ GG+V+H G +
Sbjct: 523 SSGQECGVILDRTSFYAEQGGQIFDEGYMVKIDDETVEFTVKNVQVKGGYVLHAGKV--- 579
Query: 522 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
G VG+ + +D +RR+L+ NHT TH+LN LR+VLG+ DQ+GS+V+P++LRFDF
Sbjct: 580 EGILKVGDTLSLHIDTERRRLVMNNHTGTHVLNNVLRKVLGNDSDQRGSLVMPDRLRFDF 639
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
++ P+ + ++ E+ + E I V++ +L+EAK INGLRA+F E YPDPVRVV+
Sbjct: 640 TNKGPMTIKQIKDTENEIKEIIAKNKTVYANYTSLSEAKKINGLRAMFDEHYPDPVRVVS 699
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
+G VEDL+ +P+ S E CGG+HL T + ++SEEGIAKGIRRI AVT
Sbjct: 700 VGVPVEDLIKNPDAPTGFETSVEFCGGSHLHRTSHIGEYVIVSEEGIAKGIRRIVAVTGP 759
Query: 702 LAYKAFEAACSLEKEVDDASK--------IEGSLLEKTVASLKSKVDGAAIPAPKKADIR 753
A KA LE EV++ + I + K + L +++ A I KK ++R
Sbjct: 760 EAIKAINKLSVLENEVNNVANFIKEQNESISHKEVSKKIVDLTNEISQAQISYWKKDELR 819
Query: 754 AKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVR-- 811
+ L+ Q+ +E +KA+ + T+ E A K C+ R E + ++
Sbjct: 820 NMLKNLKKQLDD------KERAEKAI-IITQVTEKA----KELCLERKESKYIVSELKAF 868
Query: 812 ------EAVLKVIEQ--KGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAAL 863
+ LK ++Q M FS D+ +K A VP KSD K L SEW+ + +
Sbjct: 869 GNTKALDGALKQVKQFCPNSAAMFFSVDKDADKIYCLAAVP-KSDVEKGLLASEWVQSVV 927
Query: 864 QPLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 903
+ G+ G A G + + A+ +A E+A KL
Sbjct: 928 DIIGGKGGGKAES-AQASGNNPNSLNEAIQIANEYAKSKL 966
>sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=aars-2 PE=2 SV=1
Length = 968
Score = 822 bits (2124), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/935 (47%), Positives = 588/935 (62%), Gaps = 53/935 (5%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KP+FLG ADPN+ L+KL RA NTQKCIRAGGKHNDLDDVGKD YHHT+FEMLGNWS
Sbjct: 46 MNQFKPLFLGIADPNSDLAKLKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWS 105
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK E I WAWELLT VY +PA+RLY + FGGDE G+ D+EARDIW +P R
Sbjct: 106 FGDYFKKEIITWAWELLTTVYGIPAERLYVSVFGGDEANGVPADSEARDIWRSVGVPDER 165
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+L FG KDNFWEMGD GPCGPCSEIHYDR GNRDA+ LVN DDP +EIWN+VFIQFNRE
Sbjct: 166 ILNFGMKDNFWEMGDVGPCGPCSEIHYDRIGNRDASHLVNADDPMVVEIWNLVFIQFNRE 225
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
G LKPLPAKH+D GLG ERL +++Q+K SNYDTD+F PIF+AI + +G R Y+G +G
Sbjct: 226 EGGVLKPLPAKHIDCGLGLERLIAVMQDKTSNYDTDIFQPIFEAIHKGSGVRAYTGFIGD 285
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
+D D VDMAYRVVADH+RTL+ A++DG P N GR YVLRRILRR VRY SE L AQ GF
Sbjct: 286 EDKDGVDMAYRVVADHVRTLTIALSDGGRPDNSGRGYVLRRILRRGVRYASEKLNAQPGF 345
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKVL 359
F LV +V+ ++G+ FPEL + + +II EE F KTL +G F++A Q + +
Sbjct: 346 FASLVPVVISILGETFPELSRDPVTVMDIINDEEKQFLKTLSRGRVLFQRAVQSLPEGTM 405
Query: 360 S--GQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARER---SRSAQNKQAG 414
+ G ++ L+DTYGFP DLTQLMAEE+GL VD N A +EAR + + SA +
Sbjct: 406 TFPGDVSWRLYDTYGFPADLTQLMAEEKGLSVD----NTAFEEARRKAIETSSAGTGKFR 461
Query: 415 GAIVMDADATAALHKRGVLATDDSFKFIW------------FQDHKSVIKAIYTGSEFIE 462
+ +D A A L ++GV TDDS K+ + F+ I AI +F++
Sbjct: 462 DTLDLDVHALAELQQKGVPTTDDSPKYAYTFTGEGSDAVYKFEPCVGKILAIRRDGKFVD 521
Query: 463 SVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSLT 519
+ G E I+L ++FYAEQGGQI+D G + + F V N Q+ GG+++ +GS
Sbjct: 522 QLAAGEEGAILLDRTNFYAEQGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGS-- 579
Query: 520 EGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRF 579
G FSVG++V + D DR++LI NHT TH+LN+ALR+VL D DQKGS+V P+++RF
Sbjct: 580 -AEGSFSVGDQVNERFDEDRKQLIMKNHTGTHVLNYALRKVLADS-DQKGSLVAPDRMRF 637
Query: 580 DFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRV 639
DF++ + + +++ E + I + V++K + L EAK + GLRA+F E YPDPVRV
Sbjct: 638 DFTNKAGMTVQQVKKAEEYAQQLIDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRV 697
Query: 640 VAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 699
VA+G VE LL +P+ +E + + E CGGTHL N + SEE IAKGIRRI A+T
Sbjct: 698 VAVGTPVEQLLQNPDAEEGQNTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALT 757
Query: 700 TGLAYKAFEAA----CSLEKEVDDASKIEGSL--------LEKTVASLKSKVDGAAIPAP 747
A +A A LE+E A K + L L+K + + + +GA +P
Sbjct: 758 GPEAERAIARADRLTARLEEESKHADKKDELLANKDKFKALQKKIQEIVDEANGAQLPYW 817
Query: 748 KKADIRAKIALLQNQV---RKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVG 804
+K IR K +Q + KAQ+ E KV E E AA +P + V
Sbjct: 818 RKDSIREKAKAIQKTLDGYTKAQQAAVAE------KVLGEAKELAAVAEQPTVLVHVFAA 871
Query: 805 LDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQ 864
+ + LK+++ VM FS +E + K V+C +KS S L+ +EW+
Sbjct: 872 NANSKAIDNALKLLKDT-KAVMAFSVNEDSGK-VLCLAKVDKSLVSNGLKANEWVNEVCT 929
Query: 865 PLKGRCGKGKGGLASGQGTDAAQVTPAMDLAAEFA 899
L G+ G GK A G + ++ A++LA +FA
Sbjct: 930 VLGGKGG-GKDANAQLTGENVDKLDAAVELAQKFA 963
>sp|O13914|SYA_SCHPO Alanine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ala1 PE=1 SV=1
Length = 959
Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/918 (48%), Positives = 574/918 (62%), Gaps = 26/918 (2%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFLGT DP++ +KL RAC++QKCIRAGGKHNDL+DVGKD YHHT FEMLGNWS
Sbjct: 51 MNQFKPIFLGTVDPSSDFAKLKRACDSQKCIRAGGKHNDLEDVGKDNYHHTMFEMLGNWS 110
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK EAI AW+LLT VY L D+LY TYFGG E++GL PD EAR +WL + SR
Sbjct: 111 FGDYFKKEAIAMAWDLLTNVYGLKKDQLYVTYFGGHEESGLEPDLEARQLWLDIGIDESR 170
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
V+P KDNFWEMGD GPCGPCSEIHYDR GNR LVN DDP +EIWNIVFIQFNRE
Sbjct: 171 VIPGSLKDNFWEMGDQGPCGPCSEIHYDRIGNRTVPELVNMDDPNVLEIWNIVFIQFNRE 230
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
DGSL+PLP +HVDTG+GFERL S++QNK SNYDTDVF PIF IQ+ T ARPY+GK+G
Sbjct: 231 KDGSLRPLPNRHVDTGMGFERLVSVIQNKTSNYDTDVFSPIFAKIQELTNARPYTGKMGD 290
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG- 298
+D D +D AYRVVADH+RTL+FAI+DG P NEGR YVLRRILRR RY + G
Sbjct: 291 EDVDGIDTAYRVVADHVRTLTFAISDGGVPNNEGRGYVLRRILRRGARYVRKKFGVPIGN 350
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKG---IEKFKKAAQDVQ 355
FF+ L VV+ MGD FPELK++ +RE++ EE SF +TL +G E++ AA+
Sbjct: 351 FFSRLSLTVVEQMGDFFPELKRKVDDVRELLDEEEESFSRTLDRGEKMFEQYAAAAKKTP 410
Query: 356 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 415
K L G D + L++TYGFP+DLT LMAEE G+ +D GF A ++E S+ A + G
Sbjct: 411 SKTLQGNDVWRLYETYGFPVDLTHLMAEEAGIKIDEPGFEAAQARSKEISKQASKGGSSG 470
Query: 416 --AIVMDADATAALHKR-GVLATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNE 469
+V+D A AL K + TDD FK KSVIK IY F E G +
Sbjct: 471 DDLLVLDVHALGALSKMDDIPETDDVFKHNSVS-LKSVIKGIYHKGGFQKSTEGFNSGEQ 529
Query: 470 VGIVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 527
+G++L ++FYAEQGGQ +D G I+G+ F V NVQ+Y G+V+H G L G +V
Sbjct: 530 LGLLLDRTNFYAEQGGQEYDTGHIVIDGV-ADFRVTNVQVYAGYVLHTGFLE--YGNLTV 586
Query: 528 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 587
+ V+C+ D RR + NHT TH+LN ALR LGD +DQ+GS+V EKLRFDFS+ +
Sbjct: 587 NDSVVCEYDEIRRWHLMNNHTVTHILNLALRNTLGDGIDQRGSLVSQEKLRFDFSYKSSI 646
Query: 588 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 647
+ L +E+ N I+ L V+SKE L++AK INGLRAVFGEVYPDPVRVV IG ++
Sbjct: 647 PIDKLLLVENYCNNVIQDNLSVYSKEVALSKAKEINGLRAVFGEVYPDPVRVVCIGVDID 706
Query: 648 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 707
LL +P+ +W S E CGGTH + E + F +L E GIAKGIRRI AVT+ A +
Sbjct: 707 TLLQEPKKPDWTKYSIEFCGGTHCDKSGEIKDFVILEENGIAKGIRRIVAVTSTEANRVS 766
Query: 708 EAACSLEKEVDDASKIEGS-LLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKA 766
A + + K+ S E + + + + A +K ++ +IA + QV++
Sbjct: 767 RLANEFDARIAKLEKMPFSPAKEAELKKISVDLSKLVVAAVRKHAMKERIAKITKQVQEH 826
Query: 767 QKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ-KGMPV 825
K + ++ V V TE + F +++V + + A+ A+ + K +
Sbjct: 827 VKAINAAEQKEVVNVVTEYFKENPD--MSFVVAKVPISANPKALSFALTYAKKNLKDKSI 884
Query: 826 MVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDA 885
+ ++D+ T A C PE K+L EW + GR G GKG G G
Sbjct: 885 YLLASDD-TKVAHACLVSPE---AMKKLTPQEWSQKVCHSIGGRSG-GKGDTCQGVGDKP 939
Query: 886 AQVTPAMDLAAEFAAMKL 903
+ A++ A EF KL
Sbjct: 940 LSIDVAVEEAIEFFQGKL 957
>sp|Q5AQL1|SYA_EMENI Alanine--tRNA ligase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=ala1 PE=3 SV=2
Length = 961
Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/913 (48%), Positives = 586/913 (64%), Gaps = 24/913 (2%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K IFLGT +PN+ ++L A N+QKCIRAGGKHNDLDDVGKD+YHHTFFEMLGNWS
Sbjct: 52 MNQFKSIFLGTVNPNSDFAQLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWS 111
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK EAI+++WELLT+VY L RLY TYF G+++ GL PD EA+ +W +P
Sbjct: 112 FGDYFKKEAIQYSWELLTQVYGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPEDH 171
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMGD GPCGPCSEIHYDR G R+AASLVN DDP +EIWN VFIQ+NRE
Sbjct: 172 ILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNQDDPNVLEIWNNVFIQYNRE 231
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
+DGSL+ LP KHVDTG+GFERL S+LQ+K SNYDTDVF PIF IQ TGAR Y G+ G
Sbjct: 232 NDGSLRSLPNKHVDTGMGFERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRFGT 291
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG- 298
DD+D +D AYRVVADH+RTL FAI+DG P NEGR YV+RR+LRR RY + + G
Sbjct: 292 DDSDGIDTAYRVVADHVRTLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEIGS 351
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--- 355
FF+ +V VV+ +GD+FPELKQ++ + EI+ EE SF KTL +G +F++ AQ +
Sbjct: 352 FFSKIVPTVVEQLGDMFPELKQKQQDVIEILNEEEISFAKTLDRGERQFEQYAQQAKTAG 411
Query: 356 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 415
L G D + L+DT+GFP+DLT++MAEERGL +D F A +A+E S+ Q K G
Sbjct: 412 DHKLHGADVWRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASK-GQKKTTTG 470
Query: 416 AIVMDADATAALHK-RGVLATDDSFKFIWFQDHKSVIKAIYTGSEF---IESVVPGNEVG 471
++ +D L K GV TDDS KF + + IKAIY G F +++ ++G
Sbjct: 471 SVKLDVHDLGKLEKMNGVPKTDDSAKF-EIGNVTAQIKAIYHGKTFHSSTQNLDDSEQIG 529
Query: 472 IVLASSSFYAEQGGQIFDEG--FIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGE 529
I+L ++FYAEQGGQ D G I+G V +VQ Y G+V+H G + G+ F V +
Sbjct: 530 IILDRTNFYAEQGGQENDTGRIVIDGQ-AELEVVDVQQYAGYVLHTGYMKYGS--FKVDD 586
Query: 530 EVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDP 589
VIC+ D RR I NHT TH+LNFALR VLGD ++QKGS+V EKLRFDFSH PV
Sbjct: 587 TVICEYDELRRWPIRNNHTGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPVTD 646
Query: 590 EHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL 649
L +IE + + I+ V+SKE L+ A+ I G+RAVFGE YPDPVRVV++G +++++
Sbjct: 647 VELVKIEDLSTQYIRRNCLVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELDEI 706
Query: 650 LADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEA 709
L + E+ W S E CGGTH+ T + + +L E GIAKGIRRI AVT A++
Sbjct: 707 LKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRL 766
Query: 710 ACSLEKEVDDASKI-EGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQK 768
A EK ++ + GS E+ ++ +++ +I A +K+ R + + ++ QK
Sbjct: 767 AEEFEKRLNHLEAMPSGSAKEQNAKQIQVELNQLSISAVQKSRFRERFTQINKKIIDEQK 826
Query: 769 KVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMVF 828
+ +KAV+ T A + K + I+++ + +A AV E L ++ K MV+
Sbjct: 827 AQQKLESKKAVESITSYFAAPENANKSWLIAKLPISANAKAVSEC-LTYVKTKLADKMVY 885
Query: 829 STDETTNKAVVCAG--VPEK-SDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDA 885
+ V G VP+ SDQ SEW ++A+ G GKG + G G +
Sbjct: 886 VLASSLEDGRVAHGCYVPKAISDQGAS--ASEW-SSAVSRAVGGKAGGKGPTSIGNGINP 942
Query: 886 AQVTPAMDLAAEF 898
+V A+DLA+E+
Sbjct: 943 EKVDDAVDLASEY 955
>sp|Q9VLM8|SYAC_DROME Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster
GN=Aats-ala PE=2 SV=1
Length = 966
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/936 (45%), Positives = 571/936 (61%), Gaps = 48/936 (5%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFLGTADPN+++SK R NTQKCIRAGGKHNDLDDVGKD YHHTFFEMLGNWS
Sbjct: 45 MNQFKPIFLGTADPNSEMSKWVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWS 104
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPASR 119
FGDYFK E WAWE LT+ LP DRLY TYFGGD +GL PD E + +WL L
Sbjct: 105 FGDYFKKEICSWAWEFLTQRLALPKDRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEH 164
Query: 120 VLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRE 179
+LP KDNFWEMG+TGPCGPCSE+H+DR G R LVN DDP +EIWN+VFIQ+NRE
Sbjct: 165 ILPGSMKDNFWEMGETGPCGPCSELHFDRIGGRSVPELVNMDDPDVLEIWNLVFIQYNRE 224
Query: 180 SDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGA 239
SDGSLK LP KH+D G+GFERL S++QNK SNYDTD+F+P+FDAIQ TGA PY G+VGA
Sbjct: 225 SDGSLKQLPKKHIDCGMGFERLVSVIQNKRSNYDTDLFVPLFDAIQAGTGAPPYQGRVGA 284
Query: 240 DDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGF 299
DD D +DMAYRV+ADH RT++ A+ADG P N GR YVLRRILRRAVRY +E L A+ GF
Sbjct: 285 DDVDGIDMAYRVLADHARTITIALADGGTPDNTGRGYVLRRILRRAVRYATEKLNAKPGF 344
Query: 300 FNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK-V 358
F LVN VV ++GD FPE+K+ HI +II EE F KTL +G + + + +
Sbjct: 345 FATLVNTVVDLLGDAFPEVKKDPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTT 404
Query: 359 LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGGA-- 416
+ G A+ L+DTYGFP+DLTQLMAEE+ L +D++G+ A + S Q GA
Sbjct: 405 IPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAA------KHNSYVLSQGKGASK 458
Query: 417 ---IVMDADATAALHKRGVLATDDSFKFIW--FQDHK----------SVIKAIYTGSEFI 461
I +D A + L ++GV T+D+FK+ + D + S I A+ ++F+
Sbjct: 459 IEEINLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFV 518
Query: 462 ESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGL---FGSFYVRNVQIYGGFVIHIGSL 518
+ G + GIVL ++FYAE GGQI+D+G + + F V V GG+++HIG +
Sbjct: 519 NEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVV 578
Query: 519 TEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLR 578
G VG+E+ +D +RR L NH+ TH LN L +VLG +QKGS+V+PEKLR
Sbjct: 579 ---EGTLKVGDELELHIDVERRWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLR 635
Query: 579 FDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVR 638
FDF+ + E + + E + E + + +++KE+ LA AK I GLR+VF EVYPDPVR
Sbjct: 636 FDFNSKAAMTIEQVSKTEQLTKEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVR 695
Query: 639 VVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAV 698
V++ G V++L +P+++ S E CGGTHL + F + SEE IAKGIRRI A+
Sbjct: 696 VISFGVPVDELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVAL 755
Query: 699 TTGLAYKAFEAACSLEKEV--------DDASKIEGSLLEKTVASLKSKVDGAAIPAPKKA 750
T A KA + + + E+E+ +D S + K + L ++ A IP KK
Sbjct: 756 TGPEALKALKKSEAFEQEIVRLKATIDNDKSGKDSKSHVKEIVELTEQISHATIPYVKKD 815
Query: 751 DIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKP---FCISRVEVGLDA 807
++R + L+ + E L+ AV V P + ++E +
Sbjct: 816 EMRNLLKGLKKTLDD-----KERALRAAVSVTVVERAKTLCEANPNATVLVEQLEAFNNT 870
Query: 808 AAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLK 867
A+ A+ +V Q +F + + +K + C KS K L+ +EW+ L
Sbjct: 871 KALDAALKQVRSQLPDAAAMFLSVDADSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLG 930
Query: 868 GRCGKGKGGLASGQGTDAAQVTPAMDLAAEFAAMKL 903
G+ G GK A GT+ +V + LA++FA KL
Sbjct: 931 GKGG-GKPESAQASGTNYEKVDEIVQLASKFAQSKL 965
>sp|Q14CH7|SYAM_MOUSE Alanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Aars2 PE=2
SV=1
Length = 980
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/944 (40%), Positives = 534/944 (56%), Gaps = 78/944 (8%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFLGT DP ++++ R N+QKC+RAGG+HNDL+DVG+D HHTFFEMLGNW+
Sbjct: 74 MNQFKPIFLGTVDPRSEMAGFRRVVNSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWA 133
Query: 61 FG-DYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPAS 118
FG +YFK EA AWELLT+VY +P DRL+ +YF GD + GL PD E RDIWL +PAS
Sbjct: 134 FGGEYFKEEACSMAWELLTQVYGIPEDRLWVSYFSGDSQTGLDPDLETRDIWLSLGVPAS 193
Query: 119 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 178
RVL FG ++NFWEMGDTGPCGPC+EIHYD G + P +E+WN+VF+Q R
Sbjct: 194 RVLSFGPQENFWEMGDTGPCGPCTEIHYDLAGGVGS--------PQLVELWNLVFMQHYR 245
Query: 179 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 238
E+DGSL+ LP +HVDTG+G ERL ++LQ K S YDTD+F P+ DAI Q+ GA PYSG+VG
Sbjct: 246 EADGSLQLLPQRHVDTGMGLERLVAVLQGKRSTYDTDLFSPLLDAIHQSCGAPPYSGRVG 305
Query: 239 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 298
A D ++D AYRVVADHIRTLS IADG PG G VLRRILRRAVRY +EVL+A G
Sbjct: 306 AADEGRIDTAYRVVADHIRTLSVCIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPG 365
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV 358
F LV +VV+ +G +PEL++ I +++ +EA+F +L +G + K
Sbjct: 366 FLGSLVPVVVETLGSAYPELEKNSVKIASLVSEDEAAFLASLQRGRRIIDRTV-----KR 420
Query: 359 LSGQDAF---ILWD-----TYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQ 409
L D F + W G PLDL +LM EE+G+ +D G A EA+ R++ A+
Sbjct: 421 LGPSDLFPAEVAWSLSLSGNLGIPLDLVELMLEEKGVKLDTAGLEQLAQKEAQHRAQQAE 480
Query: 410 NKQAGGAIVMDADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIY--TGS 458
Q + +D A LH++G+ TDDS K+ + F ++ + +Y TG+
Sbjct: 481 ADQE-DRLCLDVHALEELHRQGIPTTDDSPKYNYTLHPNGDYEFGLCEARVLQLYSETGT 539
Query: 459 EFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI-----EGLFGSFYVRNVQIYGGFVI 513
+ SV G G++L ++FYAEQGGQ D G++ + + F V Q+ GGF++
Sbjct: 540 A-VASVGAGQRCGLLLDRTNFYAEQGGQASDRGYLVRTGQQDML--FPVAGAQLCGGFIL 596
Query: 514 HIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVL 573
H E R VG++V VD R HT TH+L++ALR+ LG +Q+GS +
Sbjct: 597 HEAMAPE---RLQVGDQVQLYVDKAWRMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLN 653
Query: 574 PEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVY 633
PE+LRFD + + E LR +ES V E + + VF +E LA I GLR+ EVY
Sbjct: 654 PERLRFDVATQTLLTTEQLRTVESYVQEVVGQDKPVFMEEVPLAHTARIPGLRS-LDEVY 712
Query: 634 PDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIR 693
PDPVRVV++G V L P ++ + S ELC GTHL +T ++ E + KGI
Sbjct: 713 PDPVRVVSVGVPVAHALG-PASQAAMHTSVELCCGTHLLSTGAVGDLVIIGERQLVKGIT 771
Query: 694 RITAVTTGLAYKAFEAACSLEKEVDDASK---------IEGSLLEKTVASLKSKVDGAAI 744
R+ A+T A +A E SL +EV+ AS+ E L K + L + A I
Sbjct: 772 RLLAITGEQAQQAREVGQSLSQEVEAASERLSQGSRDLPEAHRLSKDIGRLTEVAESAVI 831
Query: 745 PAPKKADIRAKIALLQNQ----VRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISR 800
P ++ +++ + +LQ + +RK +K A E Q+ +K +E P +
Sbjct: 832 PQWQRQELQTTLKMLQRRANTAIRKLEKGQATEKSQELLKRHSE---------GPLIVDT 882
Query: 801 VEVGLDAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLT 860
V ++ +V V++ + ++ + V +V+CA D + W
Sbjct: 883 VSA--ESLSVLVKVVRQLCKQAPSISVLLLSPQPTGSVLCA-CQVAQDATPTFTAEAWAL 939
Query: 861 AALQPLKGRCGKGKGGLASGQGT-DAAQVTPAMDLAAEFAAMKL 903
A + GK G QGT A + A+ A +A +L
Sbjct: 940 AVCSHMG---GKAWGSRVVAQGTGHTADLEAALGTARAYALSQL 980
>sp|Q5JTZ9|SYAM_HUMAN Alanine--tRNA ligase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1
SV=1
Length = 985
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/876 (41%), Positives = 510/876 (58%), Gaps = 63/876 (7%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFLGT DP ++++ R N+QKC+RAGG HNDL+DVG+D HHTFFEMLGNW+
Sbjct: 79 MNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWA 138
Query: 61 FG-DYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPAS 118
FG +YFK EA AWELLT+VY +P +RL+ +YF GD KAGL PD E RDIWL +PAS
Sbjct: 139 FGGEYFKEEACNMAWELLTQVYGIPEERLWISYFDGDPKAGLDPDLETRDIWLSLGVPAS 198
Query: 119 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 178
RVL FG ++NFWEMGDTGPCGPC+EIHYD G A P +E+WN+VF+Q NR
Sbjct: 199 RVLSFGPQENFWEMGDTGPCGPCTEIHYDLAGGVGA--------PQLVELWNLVFMQHNR 250
Query: 179 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 238
E+DGSL+PLP +HVDTG+G ERL ++LQ K S YDTD+F P+ +AIQQ A PY G+VG
Sbjct: 251 EADGSLQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVG 310
Query: 239 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 298
D + D AYRVVADHIRTLS I+DG PG G VLRRILRRAVR+ E+LKA G
Sbjct: 311 VADEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRRILRRAVRFSMEILKAPPG 370
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGKV 358
F LV +VV+ +GD +PEL++ A I +++ +EA+F +L +G + +
Sbjct: 371 FLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAFLASLERGRRIIDRTL-----RT 425
Query: 359 LSGQDAF---ILWDT-----YGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARERSRSAQ 409
L D F + W G PLD+ +LM EE+G+ +D G A +EA+ R+R A+
Sbjct: 426 LGPSDMFPAEVAWSLSLCGDLGLPLDMVELMLEEKGVQLDSAGLERLAQEEAQHRARQAE 485
Query: 410 NKQAGGAIVMDADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIYT-GSE 459
Q G + +D A L ++GV TDDS K+ + F ++ + +YT
Sbjct: 486 PVQKQG-LWLDVHALGELQRQGVPPTDDSPKYNYSLRPSGSYEFGTCEAQVLQLYTEDGT 544
Query: 460 FIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFI-----EGLFGSFYVRNVQIYGGFVIH 514
+ SV G G++L ++FYAEQGGQ D G++ E + F V Q+ GGF++H
Sbjct: 545 AVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRAGQEDVL--FPVARAQVCGGFILH 602
Query: 515 IGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLP 574
E +G++V VD R HT TH+LN+ALR+ LG +Q+GS + P
Sbjct: 603 EAVAPEC---LRLGDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQGSHLNP 659
Query: 575 EKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYP 634
E+LR D + P+ PE LR +E+ V E + + V+ +E LA + GLR+ EVYP
Sbjct: 660 EQLRLDVTTQTPLTPEQLRAVENTVQEAVGQDEAVYMEEVPLALTAQVPGLRS-LDEVYP 718
Query: 635 DPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRR 694
DPVRVV++G V L DP ++ L S ELC GTHL T ++ + ++KG R
Sbjct: 719 DPVRVVSVGVPVAHAL-DPASQAALQTSVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTR 777
Query: 695 ITAVTTGLAYKAFEAACSLEKEVDDASK---------IEGSLLEKTVASLKSKVDGAAIP 745
+ AVT A +A E SL +EV A++ E L K + L V+ A +P
Sbjct: 778 LLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDVAEALRLSKDIGRLIEAVETAVMP 837
Query: 746 APKKADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGL 805
++ ++ A + +LQ R+A + + + +A K E E + P + V
Sbjct: 838 QWQRRELLATVKMLQ---RRANTAIRKLQMGQAAKKTQELLERHSKG--PLIVDTVSAES 892
Query: 806 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCA 841
+ V+ V ++ EQ ++ + + K V+CA
Sbjct: 893 LSVLVK-VVRQLCEQAPSTSVLLLSPQPMGK-VLCA 926
>sp|D3ZX08|SYAM_RAT Alanine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Aars2
PE=2 SV=1
Length = 985
Score = 629 bits (1621), Expect = e-179, Method: Compositional matrix adjust.
Identities = 375/889 (42%), Positives = 510/889 (57%), Gaps = 84/889 (9%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+KPIFLGT DP ++++ R N+QKC+RAGG+HNDL+DVG+D HHTFFEMLGNW+
Sbjct: 74 MNQFKPIFLGTVDPRSEMAGFRRVANSQKCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWA 133
Query: 61 FG-DYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF-LPAS 118
FG +YFK EA AWELLT+VY +P DRL+ +YF GD K GL PD E RDIWL +PAS
Sbjct: 134 FGGEYFKKEACSMAWELLTQVYGIPEDRLWVSYFSGDSKTGLDPDLETRDIWLSLGVPAS 193
Query: 119 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 178
RVL FG ++NFWEMGDTGPCGPC+EIHYD G P +E+WN+VF+Q R
Sbjct: 194 RVLSFGLQENFWEMGDTGPCGPCTEIHYDLAGGMGP--------PQLVELWNLVFMQHYR 245
Query: 179 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 238
E+DGSL LP +HVDTG+G ERL ++LQ K S YDTD+F P+ DAI Q+ PYSG+VG
Sbjct: 246 EADGSLHLLPQQHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLDAIHQSCRVPPYSGRVG 305
Query: 239 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 298
A D ++D AYRVVADHIRTLS IADG PG G VLRRILRRAVRY +EVL+A G
Sbjct: 306 AADEGRIDTAYRVVADHIRTLSVCIADGVSPGMSGAPLVLRRILRRAVRYSTEVLQAPPG 365
Query: 299 FFNGLVNIVVKVMGDVFPELKQREA-----HIREIIAAEEASFGKTLLKGIEKFKKAAQD 353
F LV +VV +G +PEL++ I +++ +EA+F +L +G +
Sbjct: 366 FLGNLVPVVVATLGAAYPELQKNSVKVLIWEIANLVSEDEAAFLASLQRGRRIIDRTV-- 423
Query: 354 VQGKVLSGQDAF---ILWD-----TYGFPLDLTQLMAEERGLLVDIEGFNN-AMDEARER 404
K L D F + W G PLDL QLM EE+G+ +D G A EA+ R
Sbjct: 424 ---KRLGPSDLFPAEVAWSLSLSGNLGIPLDLVQLMLEEKGVKLDTAGLEQLAQKEAQHR 480
Query: 405 SRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIW---------FQDHKSVIKAIY 455
++ A+ Q G + +D A LH++G+ TDDS K+ + F ++ + +Y
Sbjct: 481 AQQAEAAQEEG-LCLDVHALEELHRQGIPTTDDSPKYNYSLRPNGDYEFGLCEAQVLQLY 539
Query: 456 --TGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGS---FYVRNVQIYGG 510
TG+ + SV G G++L ++FYAEQGGQ D G++ F V Q+ GG
Sbjct: 540 SETGTA-VASVGEGQRCGLLLDRTNFYAEQGGQASDRGYLIRTGQQDVLFPVARAQVCGG 598
Query: 511 FVIHIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGS 570
F++H E VG+ V VD R HT TH+LN+ALR+ LG +Q+GS
Sbjct: 599 FILHEAMAPEC---LQVGDRVQLYVDKAWRMGCMVKHTATHLLNWALRQTLGPTTEQRGS 655
Query: 571 VVLPEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFG 630
+ PE+LRFD + P+ E LR +ES V E + + V+ +E LA I GLR+
Sbjct: 656 HLNPERLRFDVATQTPLTTEQLRTVESYVQEAVGQDKPVYMEEVPLAHTARIPGLRS-LD 714
Query: 631 EVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAK 690
EVYPDPVRVV++G V LA P ++ L S ELC GTHL +T ++ + + K
Sbjct: 715 EVYPDPVRVVSVGVPVAQALA-PASQAALQTSVELCCGTHLLSTGAVGDLVIIGDRQLVK 773
Query: 691 GIRRITAVTTGLAYKAFEAACSLEKEVDDASK---------IEGSLLEKTVASLKSKVDG 741
GI R+ A+T A +A E SL +EV+ AS+ +E L K + L +
Sbjct: 774 GITRLLAITGEQAQQAREVGQSLSQEVEVASERLSRGSRDLLEAHRLSKDIGRLIEFTES 833
Query: 742 AAIPAPKKADIRAKIALLQNQ----VRKAQKKVAEENLQKAVKVATETAEAAASNGKPFC 797
A IP ++ + + + +LQ + +RK +K A E Q+ +K +E P
Sbjct: 834 AVIPQWQRQEQQTTLKMLQRRANTAIRKLEKSQATEKSQELLKRHSE---------GPLI 884
Query: 798 ISRVEVGLDAAAVREAVLKVIEQ-----KGMPVMVFSTDETTNKAVVCA 841
+ V +A ++KV+ Q M V++ S T +V+CA
Sbjct: 885 VDTV-----SAQSLSVLVKVVRQLCKQAPSMSVLLLSPQPT--GSVLCA 926
>sp|Q8KG04|SYA_CHLTE Alanine--tRNA ligase OS=Chlorobium tepidum (strain ATCC 49652 / DSM
12025 / TLS) GN=alaS PE=3 SV=1
Length = 885
Score = 591 bits (1523), Expect = e-167, Method: Compositional matrix adjust.
Identities = 353/840 (42%), Positives = 474/840 (56%), Gaps = 98/840 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG + TRA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWS
Sbjct: 42 MNQFKDVFLGKG-----TREYTRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPAS 118
FGDY+K EAI WAWEL+T+V++LP +RLYAT + DE E+ +W + S
Sbjct: 97 FGDYYKKEAIGWAWELMTEVWKLPKERLYATVYHDDE--------ESFKLWQSETDIEHS 148
Query: 119 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 178
+L FG KDNFWEMG+TGPCGPCSEIH D T + LVN D IE+WN+VFIQ++R
Sbjct: 149 HILKFGDKDNFWEMGETGPCGPCSEIHIDLTPDGSGGPLVNVGDHRVIELWNLVFIQYDR 208
Query: 179 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 238
++DG+L PLP KHVDTG+GFER+ ++LQ K SNYD+DVF P+FD I + TG Y+ +
Sbjct: 209 QADGTLVPLPQKHVDTGMGFERVAAVLQGKSSNYDSDVFAPLFDRITELTGT-VYTASLD 267
Query: 239 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 298
+ D+A RV+ADH RTL+FA++DG+ PGNEGR YVLRRILRRAVRY L +
Sbjct: 268 SPS----DIAMRVIADHCRTLTFALSDGAMPGNEGRGYVLRRILRRAVRYAG-TLGCHEP 322
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--- 355
+V ++V+ MGDVFPEL++++A + +II AEE SF TL +G E F + D++
Sbjct: 323 IIYKMVEVLVRTMGDVFPELEKQQATVEKIIRAEEESFLVTLGRGTEIFNEVVADMKTAG 382
Query: 356 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 415
+SG DAF L+DT+GFPLDLT+LMA E GL +D GF + M E + R+R
Sbjct: 383 STTISGADAFKLYDTFGFPLDLTRLMAAEVGLGIDEAGFEHCMMEQKTRAR--------- 433
Query: 416 AIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIY----TGSEFIESVVPGNEVG 471
MD + DD ++ WF Y T + + + V G+++
Sbjct: 434 ---MDRKGKMQMQ-------DDGGEWQWFAPEAPTTFVGYDMLETEATLVAARVSGDKLL 483
Query: 472 IVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI----------GSLTEG 521
+VL + FYAE GGQ+ D G +E V + + G ++H+ ++T
Sbjct: 484 MVLDQTPFYAESGGQVGDHGTLETAGYRLDVTDTRKDGEQIVHVVTSAHDKVRDCAVTPA 543
Query: 522 AGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
F V VD DRR NHT TH+L+ ALR+VLG+HV QKGS+V PE+LRFDF
Sbjct: 544 DVSFDGVVSVKAAVDRDRRVATERNHTATHLLHAALRKVLGEHVQQKGSLVTPERLRFDF 603
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
SH V E L ++E VN +I+ V E G A FG+ Y D VRVV
Sbjct: 604 SHFSKVSAEELEQVEHEVNAEIRKAASVTKHADVPYEEALALGALAFFGDKYADRVRVVE 663
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
+ IS ELCGGTH+ N + ++SE +A GIRRI AV TG
Sbjct: 664 VP----------------GISIELCGGTHVGNIGQIGMVKIVSESSVAAGIRRIEAV-TG 706
Query: 702 LAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQN 761
A +A L +E D +I+ LK K D A P KI L
Sbjct: 707 AAAEAL-----LWQEYRDLQEIKN--------LLKLKADEEAGP---------KIKELLE 744
Query: 762 QVRKAQKKVAEENLQKAV-KVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQ 820
+ + K++ E L + ++A A NG R++ G+ +R+A + + E+
Sbjct: 745 EKKALDKQLQESRLAGLLDRLAASLAGGEEVNGCRIMTERLD-GVSGDELRQAAVALRER 803
>sp|Q11V49|SYA_CYTH3 Alanine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406 /
NCIMB 9469) GN=alaS PE=3 SV=1
Length = 877
Score = 580 bits (1494), Expect = e-164, Method: Compositional matrix adjust.
Identities = 321/713 (45%), Positives = 425/713 (59%), Gaps = 60/713 (8%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K FLG P K R +TQKC+R GKHNDL++VG DTYHHT FEMLGNWS
Sbjct: 42 MNQFKDYFLGNETP-----KYRRIADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDYFK EAI W+WELLT VY+LP DRLY T F GD+K LA D EA + W K++ R+
Sbjct: 97 FGDYFKEEAIAWSWELLTSVYKLPKDRLYVTIFEGDDKEKLARDTEAYNFWKKWIAEDRI 156
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYD-RTGNR----DAASLVNNDDPTCIEIWNIVFIQ 175
L KDNFWEMG+ GPCGPCSEIH D RT D +LVNND P +EIWN VFIQ
Sbjct: 157 LLGNKKDNFWEMGEQGPCGPCSEIHVDLRTDEEVKAVDGKTLVNNDHPQVVEIWNNVFIQ 216
Query: 176 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 235
FNR++DGSL+ LP KHVDTG+GFERL +Q K SNYDTDVF P+ D + +A G
Sbjct: 217 FNRKADGSLEELPDKHVDTGMGFERLCMAIQKKKSNYDTDVFTPMIDFVAKAAGI----- 271
Query: 236 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 295
K GAD +K D+A RV+ADHIR +SF IADG P N YV+RRILRRAVRY L
Sbjct: 272 KYGAD--EKTDIAMRVMADHIRAISFVIADGQLPSNNKAGYVIRRILRRAVRYAYTFLNL 329
Query: 296 QDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ 355
++ F LV ++ + VFPELK ++ + +++ EE SF +TL G+ K ++ ++++
Sbjct: 330 KEPFLYKLVAVLADQLAHVFPELKSQQDFVAKVVQEEEISFLRTLDIGLSKLEQIREELK 389
Query: 356 GK---VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 412
K + G+ AF L+DT+GFPLDL QL+A E GL VD GF+ M ++RS+ A
Sbjct: 390 AKKATTIDGKTAFELYDTFGFPLDLIQLIARENGLTVDEAGFDTEMAAQKQRSKKA---- 445
Query: 413 AGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPG-NEVG 471
A V +D T ++ DD +F+ + S + I ++ + G ++
Sbjct: 446 ---ASVETSDWT-------IVTEDDEVEFVGYDHLISTSRII----KYRQVKTKGKDQYQ 491
Query: 472 IVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEV 531
+VL ++ FYAE GGQ D G + V N +IHI + V
Sbjct: 492 LVLDTTPFYAESGGQAGDTGTLVQGDKKIKVLNTVKENNLIIHITEQLPA----DLKAPV 547
Query: 532 ICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEH 591
CKV+ +R L NH+ TH+L+ AL++VLG HV+QKGS+V LRFDFSH V E
Sbjct: 548 DCKVNVLQRSLTENNHSATHLLHAALKQVLGSHVNQKGSLVNESVLRFDFSHFSKVTEEE 607
Query: 592 LRRIESIVNEQIKAELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLL 650
L+++E IVNE+I+ + + + + EAK + G A+FGE Y + VR++
Sbjct: 608 LKKVELIVNEKIRENISLNERRNVPIEEAKKL-GAMALFGEKYGEYVRMITFDD------ 660
Query: 651 ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 703
S S ELCGGTH+S+T + F + SE +A G+RRI A+T A
Sbjct: 661 ---------SFSRELCGGTHVSSTGKIGFFKITSESSVAAGVRRIEALTATAA 704
>sp|Q6LMU3|SYA_PHOPR Alanine--tRNA ligase OS=Photobacterium profundum GN=alaS PE=3 SV=2
Length = 873
Score = 573 bits (1476), Expect = e-162, Method: Compositional matrix adjust.
Identities = 357/918 (38%), Positives = 506/918 (55%), Gaps = 103/918 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K FLG + TRA Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDTFLGI-----EKRSYTRATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL--PAS 118
FGDYFK +AI++AWE LT V LP DRL T + D+EA DIW K + PA
Sbjct: 99 FGDYFKQDAIKYAWEFLTDVLGLPQDRLLVTIY--------ETDDEAFDIWNKEMGIPAD 150
Query: 119 RVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPCSEI YD G R D IE
Sbjct: 151 RIVRIGDNKGAPYASDNFWQMGDTGPCGPCSEIFYDHGEHIWGGRPGTP--EEDGDRFIE 208
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWN VF+QFNR++DG+++PLP VDTG+G ER+ +I+Q SNY+ D+F + +
Sbjct: 209 IWNNVFMQFNRQADGTMEPLPKPSVDTGMGIERIAAIMQGVHSNYEIDIFQTLIKKSAEV 268
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
G S + + RVVADHIR+ +F I DG P NEGR YVLRRI+RRAVR
Sbjct: 269 IGYEDLS-----------NQSLRVVADHIRSCAFLIVDGVMPSNEGRGYVLRRIIRRAVR 317
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G++ L A FF LV + ++MG ELK+R+A + +I+ EE +FG+TL +G+
Sbjct: 318 HGNK-LGASGAFFYKLVGPLAEIMGTAGDELKKRQALVEKILKIEEDNFGRTLDRGLTIL 376
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
A ++ GK L G+ F L+DTYGFP DLT +A ER +D EGFNNAM+ R+R+R
Sbjct: 377 NDALDNLSGKELDGETVFKLYDTYGFPADLTNDVARERDFTIDEEGFNNAMEAQRQRARE 436
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDH--KSVIKAIYTGSEFIESVV 465
A G +D + + + D + +F + +S I A+Y E ++S++
Sbjct: 437 A------GKFGVDYNES--------IKVDVNTEFCGYTGTAAQSSIVALYRDGEAVDSIL 482
Query: 466 PGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRF 525
G + I+L ++ FYAE GGQ D G + F V + Q +G + H GSL +GA
Sbjct: 483 AGEDALIILDNTPFYAESGGQCGDAGVLTAENTVFNVSDTQKFGAAIGHQGSLVQGA--L 540
Query: 526 SVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGK 585
+VG+++ +VD RR I NH+ TH+L+ ALR +LG+HV QKGS+V P+ LRFDFS+ +
Sbjct: 541 NVGDKLEAQVDVVRRTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLE 600
Query: 586 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK 645
V PE LR IE +VNEQI+ + + + AK G A+FGE Y D VRV+++G
Sbjct: 601 AVKPEQLREIERVVNEQIRLNHSIDTNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMGE- 658
Query: 646 VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK 705
S ELCGG H NT + F + SE GIA GIRRI AVT A
Sbjct: 659 ---------------FSTELCGGIHAKNTGDIGLFKITSEGGIAAGIRRIEAVTGAAAID 703
Query: 706 AFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRK 765
A A + +LL +T + +KS AA A K + + A L+ +++
Sbjct: 704 ALHA--------------QEALLSETASIVKSD---AASVATKVSALLAHSKQLEKDIQQ 746
Query: 766 AQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPV 825
Q K+A + + A E NG I++++ G D A+R + ++ + G +
Sbjct: 747 LQDKLAAQESAGLLDQAKEI------NGVKVLITQLD-GADNKALRGMLDEIKNKLGSGI 799
Query: 826 MVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTDA 885
+V + + +K + GV + D + +++ E + Q + G+ G G+ +A GTDA
Sbjct: 800 VVLG-NVSGDKVGLIVGVTK--DLTGKVKAGELVNMVAQQVGGKGG-GRPDMAQAGGTDA 855
Query: 886 AQVTPAMDLAAEFAAMKL 903
A + A++ + KL
Sbjct: 856 AALPAALESVTPWLTEKL 873
>sp|Q7MV54|SYA_PORGI Alanine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=alaS PE=3 SV=1
Length = 876
Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust.
Identities = 313/710 (44%), Positives = 418/710 (58%), Gaps = 64/710 (9%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K I LG NT+ +K TR ++QKC+R GKHNDL++VG DTYHHT FEMLGNWS
Sbjct: 43 MNQFKDIILG----NTE-AKYTRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWS 97
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDYFK EAIEWAWE L V L RLYAT F G+ + GL DNEA W +FLP R+
Sbjct: 98 FGDYFKKEAIEWAWEYLVTVLGLDPQRLYATVFEGNPEEGLDRDNEAASYWAQFLPEERI 157
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQ 175
+ DNFWEMGDTGPCGPCSEIH D + + A L+N P IEIWN+VF+Q
Sbjct: 158 INGNKHDNFWEMGDTGPCGPCSEIHIDLRSDEERAQINGLELINKSHPQVIEIWNLVFMQ 217
Query: 176 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 235
+NR++D SL PLP K +DTG+GFERL LQ K SNYDTDVF P+ + TG
Sbjct: 218 YNRKADASLTPLPHKVIDTGMGFERLCMALQGKTSNYDTDVFQPLIRTLATMTG------ 271
Query: 236 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 295
+G + D+A RVVADHIRT++FAI DG P N YV+RRILRRAVRYG L
Sbjct: 272 -IGYGEDSTSDIAMRVVADHIRTIAFAITDGQLPSNAKAGYVIRRILRRAVRYGYTFLHC 330
Query: 296 QDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ 355
++ F L+ ++ MGD +PEL+ + I +I EE SF +TL GI +K D +
Sbjct: 331 REAFMYRLLPTLIDTMGDAYPELQAQRELISRVIKEEEESFLRTLETGIRLLEKKIADNK 390
Query: 356 G---KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 412
VL G AF L+DT+GFPLDLT L+ E G+ VD GF+ M + +ER+R+A +
Sbjct: 391 ATGSTVLDGVAAFELYDTFGFPLDLTALILSENGMTVDESGFDTEMQKQKERARNAAAVE 450
Query: 413 AGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGI 472
AG +V+ + G T+ + + ++ K K + +
Sbjct: 451 AGDWVVLREGESKF---SGYDFTETETEILRYRQVKQKNKEYFQ---------------V 492
Query: 473 VLASSSFYAEQGGQIFDEGFIEGLFGSFY-VRNVQIYGGFVIHI-GSLTEGAGRFSVGEE 530
VL+ + FYAE GGQ+ D G + G Y + + + +H+ L E S +
Sbjct: 493 VLSDTPFYAEMGGQVGDSGQLIDESGVAYDIFDTKRENNLSVHLMKKLPE-----STTDT 547
Query: 531 VICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPE 590
+ +++ D+R+ NHT TH+L+ ALREVLG HV+QKGS V PE LRFDFSH + PE
Sbjct: 548 FVARINQDKRRQAEANHTATHLLHEALREVLGTHVEQKGSFVSPEVLRFDFSHFGKMSPE 607
Query: 591 HLRRIESIVNEQIKAELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDL 649
+R++E +V+E+I+A+ ++ +AEA+ + G A+FGE Y + VRV+ G
Sbjct: 608 EIRKVEELVSERIRADFQREEFRDVPIAEAQAM-GAMALFGEKYGEEVRVLKYGS----- 661
Query: 650 LADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 699
S ELCGGTH+ +T AF +++E IA G+RRI AVT
Sbjct: 662 ------------SVELCGGTHIPSTGMIGAFRIVTESSIASGVRRIEAVT 699
>sp|A6VA71|SYA_PSEA7 Alanine--tRNA ligase OS=Pseudomonas aeruginosa (strain PA7) GN=alaS
PE=3 SV=1
Length = 874
Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust.
Identities = 366/920 (39%), Positives = 508/920 (55%), Gaps = 104/920 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K FLG + TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 42 MNQFKDCFLGL-----EKRAYTRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 96
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK +AI +AWE LT K LP ++L+ T + A D+EA DIW K +P
Sbjct: 97 FGDYFKRDAIHYAWEFLTGEKWLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVP 148
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
A R++ G DNFW MGDTGPCGPC+EI +D + D IE
Sbjct: 149 AERMVRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFFDHGPDIWGGPPGSPEEDGDRYIE 208
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWN VF+QFNR +DG + PLPA VDTG+G ER++++LQ+ SNY+ D+F + A +A
Sbjct: 209 IWNNVFMQFNRTADGVMHPLPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASAEA 268
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
G DDA + +VVADHIR+ SF IADG P NEGR YVLRRI+RRA R
Sbjct: 269 IG-------CANDDAPSL----KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRACR 317
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G++ L A+ FF+ +V +V MGD FPELKQ++AHI ++ EE F KTL +G++
Sbjct: 318 HGNK-LGARGTFFHKIVAALVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLKIL 376
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
++ ++QG V+ G F L+DTYGFP+DLT +A ER L +D +GF M+ RER+R
Sbjct: 377 EQDLAELQGSVIPGNVVFKLYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERAR- 435
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIESVV 465
A A MD ++ ++ D +F+ +Q I A++ + +E +
Sbjct: 436 -----ASSAFGMDYNS--------LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVERLE 482
Query: 466 PGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRF 525
G E +VL + FYAE GGQ+ D G++E F VR+ GG +H G + EG
Sbjct: 483 EGEEGVVVLDQTPFYAESGGQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAEGG--L 540
Query: 526 SVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGK 585
SVG V +VD R+ A NH+ TH+L+ ALR+VLGDHV QKGS+V ++LRFDFSH +
Sbjct: 541 SVGAAVKAEVDASVRQATALNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSHFE 600
Query: 586 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK 645
+ PE L+ +E IVN +I+ +V ++E + AK G A+FGE Y D VRV+++G
Sbjct: 601 AIKPEQLKALEDIVNAEIRRNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMGG- 658
Query: 646 VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK 705
S ELCGGTH+S T + F + SE G+A G+RRI AVT A
Sbjct: 659 --------------DFSVELCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAALA 704
Query: 706 AFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRK 765
A KE A ++GS + ++ K+ L + R
Sbjct: 705 YLNGAEEQLKEA--AGLVKGS----------------------RDNLLDKLGALLERNRS 740
Query: 766 AQKKVAEENLQKAVKVATETAEAAASN--GKPFCISRVEVGLDAAAVREAVLKVIEQKGM 823
+K++ E+ KA A + AAA + G +R++ GLD A+ V ++ + G
Sbjct: 741 LEKEL-EQLKAKAASAAGDDLSAAAVDIKGAKVLAARLD-GLDGKALLALVDQLKNKLGR 798
Query: 824 PVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGT 883
V++ E K V+ AGV + D + QL+ E L G G G+ +A G GT
Sbjct: 799 AVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAAAAVGGKGGGRPDMAQGGGT 854
Query: 884 DAAQVTPAMDLAAEFAAMKL 903
DAA++ A+ LA F L
Sbjct: 855 DAAKLDEALALAQRFVEQGL 874
>sp|A1BD33|SYA_CHLPD Alanine--tRNA ligase OS=Chlorobium phaeobacteroides (strain DSM
266) GN=alaS PE=3 SV=1
Length = 888
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 370/914 (40%), Positives = 508/914 (55%), Gaps = 101/914 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FL D T+ RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWS
Sbjct: 42 MNQFKDVFL---DKGTR--PYVRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDY+K EAI WAWELLT V+ LP +RLYAT + DE++ L E +P +
Sbjct: 97 FGDYYKKEAISWAWELLTSVWHLPKERLYATVYYDDEESYLLWQEETD------IPHDHI 150
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNRES 180
+ F KDNFWEMG+TGPCGPCSEIH D T + LVN D IE+WN+VFIQ+NR++
Sbjct: 151 IKFDEKDNFWEMGETGPCGPCSEIHIDLTEDGSGKPLVNAGDYRVIELWNLVFIQYNRQA 210
Query: 181 DGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVGAD 240
DG L+PLP KHVDTG+GFER+ +++Q K SNYDTDVF P+FD I + TG Y+ +
Sbjct: 211 DGRLEPLPQKHVDTGMGFERVCAVMQGKASNYDTDVFRPLFDRITEITGV-SYNASLD-- 267
Query: 241 DADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDGFF 300
D D+A RV+ADH RTL+FA+ DG+ P NEGR YVLRRILRRA+RY S+ L +
Sbjct: 268 --DPSDIAMRVLADHARTLTFALTDGAMPSNEGRGYVLRRILRRALRY-SKTLGCSEPLL 324
Query: 301 NGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK--- 357
LV + MGDVFPEL++++ + II AEE SF TL +GIE F + V+ +
Sbjct: 325 YRLVETLAASMGDVFPELRKQQQAVSRIIRAEEESFLATLDRGIEIFNELIAAVRSRGTT 384
Query: 358 VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAGGA 416
V+SG DAF L+DT+GFPLDLT+LMA E G VD EGF+ M E + R+R ++KQ
Sbjct: 385 VVSGDDAFRLYDTFGFPLDLTRLMAAEAGFEVDEEGFDRCMKEQKTRARQDRRDKQ---- 440
Query: 417 IVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESV----VPGNEVGI 472
H +G D ++ WF ++ + Y E + S+ + + + +
Sbjct: 441 -----------HLKG-----DEGEWTWFSAERTSVFTGYHSLEELASITGVSIFSDRLLV 484
Query: 473 VLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI-----GSLTEGA---GR 524
VL + FYAE GGQ D G+IE V + + G ++H+ S+++GA
Sbjct: 485 VLDRTPFYAESGGQCGDRGWIETAAYRLRVSDTRKDGDMIVHLVTEVRDSVSDGAISPAD 544
Query: 525 FSVGE-EVICKVDYDR--RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDF 581
S E ++ C+ DR R+ NHT TH+L+ ALR LG HV QKGS V E+LRFDF
Sbjct: 545 LSFDEGKLACRASVDRSDRQGTERNHTATHLLHAALRRTLGQHVQQKGSFVSSERLRFDF 604
Query: 582 SHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVA 641
SH + E L +ES VNEQI++ V + + G A FG+ Y D VRVV
Sbjct: 605 SHFARLTSEELAIVESEVNEQIRSAEPVVKHQDIPYDEAIARGALAFFGDKYADRVRVVE 664
Query: 642 IGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTG 701
I +S ELCGGTH+ + + F ++SE +A G+RRI A+T
Sbjct: 665 IA----------------GLSVELCGGTHVDSIGQIGLFKIVSESSVASGVRRIEALTG- 707
Query: 702 LAYKAFEAACSLE-KEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQ 760
KA E E +E+ D ++ LK K D I +IA L
Sbjct: 708 ---KAAEVLLWKEYRELQDIRQM-----------LKLKADEEVI---------GRIAELA 744
Query: 761 NQVRKAQKKVAEENLQKAVKVATETAEAAASNGK-PFCISRVEVGLDAAAVREAVLKVIE 819
+ ++ +K++ + + + +AA S G F R+E +D ++R+AVL + E
Sbjct: 745 DSKKELEKQLQVYRTEALSGILQRSLDAAESVGSIRFMTLRLE-HVDQDSLRQAVLALRE 803
Query: 820 QKGMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLAS 879
+ + T+E K + A E++ L+ + + A ++G G GK A+
Sbjct: 804 KDPASTGLLCTEE-DGKVSLTAFAGERAVGEFGLDAGKLVREAAAFVRG-GGGGKPEFAT 861
Query: 880 GQGTDAAQVTPAMD 893
G D + A D
Sbjct: 862 AGGKDPEGIQKAFD 875
>sp|B2UKT4|SYA_AKKM8 Alanine--tRNA ligase OS=Akkermansia muciniphila (strain ATCC
BAA-835) GN=alaS PE=3 SV=1
Length = 942
Score = 565 bits (1457), Expect = e-160, Method: Compositional matrix adjust.
Identities = 346/817 (42%), Positives = 462/817 (56%), Gaps = 78/817 (9%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+ P FLG P + RA +TQKCIRAGGKHNDL+DVG D+YHHTFFEMLGNWS
Sbjct: 42 MNQFVPYFLGVWTPPWTPA---RATDTQKCIRAGGKHNDLEDVGYDSYHHTFFEMLGNWS 98
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAP--DNEARDIWLKFL--- 115
FGDYFK EAI WAWEL+ + + PA+RLYAT + D+ G D EA D W +
Sbjct: 99 FGDYFKREAIRWAWELVVERWGFPAERLYATVYAPDKSKGDPGEFDREAWDFWAELFRSR 158
Query: 116 ---PASRVLPFGCKDNFWEMGDTGPCGPCSEIHYDRT--GNRDAASLVNNDDPTCIEIWN 170
P ++ KDNFW MG+TGPCGPCSE+H D T GN SLVN D CIEIWN
Sbjct: 159 GLDPDVHIVHGNVKDNFWMMGETGPCGPCSELHVDLTPEGN-TKGSLVNKDSDQCIEIWN 217
Query: 171 IVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQ---------NKMSNYDTDVFMPIF 221
+VFIQ+N ESDGS++ LPA HVDTG+GFER SI+Q K SNY TDVF P+F
Sbjct: 218 LVFIQYNAESDGSMRNLPACHVDTGMGFERACSIMQCTNGFKDFSRKPSNYATDVFRPLF 277
Query: 222 DAIQQATGAR-------PYSGKVGADDADKVD-MAYRVVADHIRTLSFAIADGSCPGNEG 273
D ++ +G + P S +V A+D + +A+RV+ADH+RTLSF+IADG PGN G
Sbjct: 278 DRLEVLSGRKYADVYPAPGSKRVDAEDGTLQEAIAFRVIADHLRTLSFSIADGILPGNNG 337
Query: 274 REYVLRRILRRAVRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEE 333
R YVLRRILRRAVRYG + Q F LV+ +V+ G VFPEL R ++E++ EE
Sbjct: 338 RNYVLRRILRRAVRYGRRLGFTQP-FLAELVDTLVESFGQVFPELAARATTVKEVLNREE 396
Query: 334 ASFGKTLLKGIEKFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEG 393
ASF +TL +G+E F A+ +SG+ AF L+DTYGFP+DLT L+AEERGL +D+E
Sbjct: 397 ASFNETLDRGLELFD--AETASAGKVSGEFAFKLYDTYGFPIDLTALLAEERGLDIDMER 454
Query: 394 FNNAMDEARERSRSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKA 453
FN M+E RER+R+A+ + A+ + DA V D+
Sbjct: 455 FNRLMEEQRERARAARKSEVVRALDLKTDAVTEFTGYDV---DE---------------- 495
Query: 454 IYTGSEFIESVVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVI 513
+ +E G+ + I+ + FYAE GGQ+ D G IE S++V VQ G
Sbjct: 496 --CAATVLEVSRQGDSLFIITDKTPFYAEMGGQVSDAGLIEIGGESYHVMAVQQIGNARA 553
Query: 514 HIGSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVL 573
H+ G G+ V +D +RR+ I +HT TH+L+ AL +V+ Q+GS V
Sbjct: 554 HVVEARPGL-EVKPGDRVHLSIDAERRRRIEAHHTATHLLHCALHQVVSPDAAQQGSFVS 612
Query: 574 PEKLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVY 633
++LRFDF + V P+ LR IE VN I+ L V E A+ K + FG+ Y
Sbjct: 613 EDRLRFDF-NSSAVSPDQLRLIEEKVNGWIEESLPVHCTERAYADVKGNAAIAQFFGDKY 671
Query: 634 PDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIR 693
D VRVV +G + L +S E CGGTH++NT+ F + SE IA G+R
Sbjct: 672 GDVVRVVQVGGCRDGLDG---------VSMEFCGGTHIANTKNIGLFKIKSEGAIASGVR 722
Query: 694 RITAVTTGLAY---------KAFEAACSLEKEVDDASKIEGSLLEKT-VASLKSKVDGAA 743
RI A+T A K+ E A ++EK + ++ LE+ V +++ K A
Sbjct: 723 RIEAMTGDAALEMIRQHVVAKSLEIAKAVEKIKEVNYELADMGLEQVPVPTIEGKPGLTA 782
Query: 744 IPAPKKADIRAKIALLQNQVRKAQKKV--AEENLQKA 778
+ A + +A V ++ AE+ L+KA
Sbjct: 783 LGASDIRTVNDSLARFDASVEHFKQTALDAEKKLKKA 819
>sp|Q87LR3|SYA_VIBPA Alanine--tRNA ligase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=alaS PE=3 SV=1
Length = 860
Score = 564 bits (1454), Expect = e-159, Method: Compositional matrix adjust.
Identities = 355/908 (39%), Positives = 493/908 (54%), Gaps = 118/908 (12%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K FLG + TRA Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDCFLGL-----EKRAYTRATTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPAS 118
FGDYFK +AI +AWE LT V +LPADRL T + D+EA DIW K +PA
Sbjct: 99 FGDYFKEDAISFAWEFLTDVLKLPADRLLVTVY--------ETDDEAFDIWNKKVGVPAD 150
Query: 119 RVLPFGCK--------DNFWEMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTCI 166
R++ G K DNFW+MGDTGPCGPC+EI YD G R D I
Sbjct: 151 RIIRIGDKKGGKPYESDNFWQMGDTGPCGPCTEIFYDHGEHIWGGRPGTP--EEDGDRFI 208
Query: 167 EIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQ 226
EIWN VF+QFNR +DG+++PLP VDTG+G ER+++I+Q SNY+ DVF + A +
Sbjct: 209 EIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIERISAIMQGVHSNYEIDVFQALIKAAAE 268
Query: 227 ATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAV 286
G S + + RV+ADHIR+ SF I DG P NEGR YVLRRI+RRAV
Sbjct: 269 VIGYEDLS-----------NQSLRVIADHIRSCSFLIVDGVMPSNEGRGYVLRRIIRRAV 317
Query: 287 RYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEK 346
R+G++ L AQ FF+ LV ++ +MG ELK+++A + +++ EE +FG+TL +G+
Sbjct: 318 RHGNK-LGAQGAFFHKLVGVLADIMGTAGEELKRQQAVVEKVLRIEEENFGRTLERGMAI 376
Query: 347 FKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSR 406
+A ++ GKVL G+ F L+DTYGFP DLT +A ER +D EGF AM+E R+R+R
Sbjct: 377 LNEALDNLDGKVLDGETVFKLYDTYGFPADLTNDVAREREFAIDEEGFEKAMEEQRQRAR 436
Query: 407 SAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHK--SVIKAIYTGSEFIESV 464
A G D +A + D +F + K S + A++ ++S+
Sbjct: 437 EA------GQFGTDYNAA--------IKVDTQTEFCGYVGTKGSSSVAAMFVEGNEVDSL 482
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G++ IVL + FYAE GGQ D G I G F V + Q G + H G + EG
Sbjct: 483 SAGDKAIIVLGETPFYAESGGQCGDAGEIRTEAGVFRVEDTQKLGNAIAHHGVMAEGV-- 540
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
+ G+EV VD +RR I+ NH+ TH+L+ ALR+VLG+HV QKGS+V E LRFDFSH
Sbjct: 541 LAKGDEVATIVDAERRAAISLNHSATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHL 600
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ V L+ +E +VN QI+ + + + AK G A+FGE Y D VRV+++G
Sbjct: 601 EAVTAAELKEVERLVNAQIRRNHVIETNVMDIESAKK-KGAMALFGEKYDDEVRVLSMG- 658
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGG H SNT + F + SE GIA GIRRI AVT A
Sbjct: 659 ---------------DFSTELCGGIHASNTGDIGLFKITSESGIAAGIRRIEAVTGEAAL 703
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EA + +E S + LEK + LK K + A + A+I
Sbjct: 704 DAIEAQAAKYEEKLAESAQKAKTLEKELQKLKDK-----MAAAESANI------------ 746
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ KAV+V NG ++ +E G D+ +R V + Q G
Sbjct: 747 ----------MGKAVEV----------NGTKVLVAALE-GADSKNLRTMVDDIKNQMGSG 785
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
V++ + + T +K + AGV + D +++ + + + + G+ G G+ +A GTD
Sbjct: 786 VVLLA-NVTDDKVGLIAGVTK--DLVGKVKAGDLVKMVAEQVGGKGG-GRPDMAQAGGTD 841
Query: 885 AAQVTPAM 892
+ + A+
Sbjct: 842 VSALPEAI 849
>sp|Q9I553|SYA_PSEAE Alanine--tRNA ligase OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=alaS PE=3 SV=1
Length = 874
Score = 564 bits (1454), Expect = e-159, Method: Compositional matrix adjust.
Identities = 366/922 (39%), Positives = 507/922 (54%), Gaps = 108/922 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K FLG + TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 42 MNQFKDCFLGL-----EKRAYTRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 96
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK +AI +AWE LT K LP ++L+ T + A D+EA DIW K +P
Sbjct: 97 FGDYFKRDAIHYAWEFLTGEKWLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVP 148
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTC 165
A R++ G DNFW MGDTGPCGPC+EI +D G + D
Sbjct: 149 AERMVRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRY 206
Query: 166 IEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQ 225
IEIWN VF+QFNR +DG + PLPA VDTG+G ER++++LQ+ SNY+ D+F + A
Sbjct: 207 IEIWNNVFMQFNRTADGVMHPLPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASA 266
Query: 226 QATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRA 285
+A G DDA + +VVADHIR+ SF IADG P NEGR YVLRRI+RRA
Sbjct: 267 EAIG-------CANDDAPSL----KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRA 315
Query: 286 VRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIE 345
R+G++ L A+ FF+ +V +V MGD FPELKQ++AHI ++ EE F KTL +G++
Sbjct: 316 CRHGNK-LGARGTFFHKIVAALVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLK 374
Query: 346 KFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERS 405
++ ++QG V+ G F L+DTYGFP+DLT +A ER L +D +GF M+ RER+
Sbjct: 375 ILEQDLAELQGSVIPGNVVFKLYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERA 434
Query: 406 RSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIES 463
R A A MD ++ ++ D +F+ +Q I A++ + +E
Sbjct: 435 R------ASSAFGMDYNS--------LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVER 480
Query: 464 VVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAG 523
+ G E +VL + FYAE GGQ+ D G++E F VR+ GG +H G + G
Sbjct: 481 LEEGEEGVVVLDQTPFYAESGGQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--G 538
Query: 524 RFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSH 583
SVG V +VD R+ A NH+ TH+L+ ALR+VLGDHV QKGS+V ++LRFDFSH
Sbjct: 539 NLSVGGAVKAEVDASVRQATALNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSH 598
Query: 584 GKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG 643
+ + E L+ +E IVN +I+ +V ++E + AK G A+FGE Y D VRV+++G
Sbjct: 599 FEAIKAEQLKALEDIVNAEIRRNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMG 657
Query: 644 RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 703
S ELCGGTH+S T + F + SE G+A G+RRI AVT A
Sbjct: 658 G---------------DFSVELCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAA 702
Query: 704 YKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQV 763
A KE AS ++GS + ++ K+ L +
Sbjct: 703 LAYLNGAEEQLKEA--ASLVKGS----------------------RDNLLDKLGALLERN 738
Query: 764 RKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVGLDAAAVREAVLKVIEQK 821
R +K++ E+ KA A + AAA G +R++ GLD A+ V ++ +
Sbjct: 739 RSLEKEL-EQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-GLDGKALLALVDQLKNKL 796
Query: 822 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 881
G V++ E K V+ AGV + D + QL+ E L G G G+ +A G
Sbjct: 797 GRAVILLGG-ELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAAAAVGGKGGGRPDMAQGG 852
Query: 882 GTDAAQVTPAMDLAAEFAAMKL 903
GTDAA++ A+ LA F L
Sbjct: 853 GTDAAKLDEALALAQRFVEQGL 874
>sp|A5FIP9|SYA_FLAJ1 Alanine--tRNA ligase OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=alaS PE=3 SV=1
Length = 879
Score = 563 bits (1451), Expect = e-159, Method: Compositional matrix adjust.
Identities = 320/732 (43%), Positives = 430/732 (58%), Gaps = 54/732 (7%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
M Q+K FLG P K R +TQKC+R GKHNDL++VG DTYHHT FEMLGNWS
Sbjct: 42 MAQFKEFFLGNGTP-----KSPRIADTQKCLRVSGKHNDLEEVGIDTYHHTMFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDYFK EAI WAWELLT+VY++P + LY + F G ++ + D EA DIW + R+
Sbjct: 97 FGDYFKKEAINWAWELLTEVYKIPKENLYVSVFEGSKEDNVPFDQEAWDIWKTLIDEDRI 156
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQ 175
+ KDNFWEMGD GPCGPCSEIH D + A SLVNND P +EIWN VF++
Sbjct: 157 ILGNKKDNFWEMGDQGPCGPCSEIHVDLRSAEEKALVSGKSLVNNDHPQVVEIWNNVFME 216
Query: 176 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 235
FNR++DGSL+ LPA+HVDTG+GFERL LQ K SNYDTDVFMP+ I+ TGA+ +
Sbjct: 217 FNRKADGSLEKLPAQHVDTGMGFERLCMALQGKTSNYDTDVFMPLIREIETITGAKYTTN 276
Query: 236 KVG--ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVL 293
V +++ +K+++A RVVADH+R ++FAIADG P N G YV+RRILRRA+RYG L
Sbjct: 277 DVTGISEEQNKMNIAIRVVADHVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFL 336
Query: 294 KAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQD 353
++ F LV + + MGD FPE++ ++A +I EE SF KTL +G+ +
Sbjct: 337 GTKEPFIYKLVETLSEQMGDSFPEIRTQKALCSNVIREEENSFLKTLDQGLILLDAVILN 396
Query: 354 VQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQA 413
G + G+ AF L+DTYGFP+DLT L+ ERGL +D EGF + +ERSR+A A
Sbjct: 397 NTGDTIDGKKAFELYDTYGFPIDLTALILSERGLKLDEEGFQEQLQLQKERSRAASKVTA 456
Query: 414 GGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIV 473
G V+ DD +F+ + +K T +ESV G +V
Sbjct: 457 G--------------DWNVIVEDDIQEFVGYDRLSQQVK--ITKYRRVESVKDGEIFQLV 500
Query: 474 LASSSFYAEQGGQIFDEGFIEGLFGSF-YVRNVQIYGGFVIHIG-SLTEG-AGRFSVGEE 530
++ FY E GGQ D+G++E G Y+ + + IH+ SL E G F+
Sbjct: 501 FNATPFYGESGGQTGDKGYLEAQNGDIVYIIDTKKENNQTIHLTQSLPENITGTFN---- 556
Query: 531 VICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPE 590
VD ++R + NH+ TH+L+ LR++LG H++QKGS+V LRFDFSH V E
Sbjct: 557 --AVVDANQRAKTSSNHSATHLLHQGLRKILGTHIEQKGSMVRNASLRFDFSHFSKVTDE 614
Query: 591 HLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLL 650
L +E+ VN +I+ L + K A E +G A+FGE Y D VR + G
Sbjct: 615 ELLEVENFVNARIRESLPLIEKRAIPKEQALEDGAIALFGEKYGDLVRTIKFGD------ 668
Query: 651 ADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAFEAA 710
S ELCGGTH++NT + F ++SE +A GIRRI A+T+ A + FE+
Sbjct: 669 -----------SVELCGGTHVANTSDIWHFKIVSEGAVAAGIRRIEAITSEAAKEYFESQ 717
Query: 711 CSLEKEVDDASK 722
E+ +A K
Sbjct: 718 AVSLAEIKEALK 729
>sp|Q02I63|SYA_PSEAB Alanine--tRNA ligase OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=alaS PE=3 SV=1
Length = 874
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 365/922 (39%), Positives = 507/922 (54%), Gaps = 108/922 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K FLG + TRA +QKC+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 42 MNQFKDCFLGL-----EKRAYTRATTSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 96
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK +AI +AWE LT K LP ++L+ T + A D+EA DIW K +P
Sbjct: 97 FGDYFKRDAIHYAWEFLTGEKWLNLPKEKLWVTVY--------ATDDEAYDIWTKEVGVP 148
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRT----GNRDAASLVNNDDPTC 165
A R++ G DNFW MGDTGPCGPC+EI +D G + D
Sbjct: 149 AERMVRIGDNKGAPYASDNFWAMGDTGPCGPCTEIFFDHGPEIWGGPPGSP--EEDGDRY 206
Query: 166 IEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQ 225
IEIWN VF+QFNR +DG + PLPA VDTG+G ER++++LQ+ SNY+ D+F + A
Sbjct: 207 IEIWNNVFMQFNRTADGVMHPLPAPSVDTGMGLERVSAVLQHVHSNYEIDLFQNLLKASA 266
Query: 226 QATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRA 285
+A G DDA + +VVADHIR+ SF IADG P NEGR YVLRRI+RRA
Sbjct: 267 EAIG-------CANDDAPSL----KVVADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRA 315
Query: 286 VRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIE 345
R+G++ L A+ FF+ +V +V MGD FPELKQ++AHI ++ EE F KTL +G++
Sbjct: 316 CRHGNK-LGARGTFFHKIVAALVAEMGDAFPELKQQQAHIERVLKTEEEQFAKTLEQGLK 374
Query: 346 KFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERS 405
++ ++QG V+ G F L+DTYGFP+DLT +A ER L +D +GF M+ RER+
Sbjct: 375 ILEQDLAELQGSVIPGNVVFKLYDTYGFPVDLTNDIARERELTIDEDGFEREMEAQRERA 434
Query: 406 RSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV--IKAIYTGSEFIES 463
R A A MD ++ ++ D +F+ +Q I A++ + +E
Sbjct: 435 R------ASSAFGMDYNS--------LVKVDGETRFLGYQGVSGAGQIVALFRDGQAVER 480
Query: 464 VVPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAG 523
+ G E +VL + FYAE GGQ+ D G++E F VR+ GG +H G + G
Sbjct: 481 LEEGEEGVVVLDQTPFYAESGGQVGDSGYLEAAGVRFDVRDTTKAGGAHLHHGVVAR--G 538
Query: 524 RFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSH 583
SVG V +VD R+ A NH+ TH+L+ ALR+VLGDHV QKGS+V ++LRFDFSH
Sbjct: 539 NLSVGAAVKAEVDASVRQATALNHSATHLLHAALRQVLGDHVQQKGSLVDSQRLRFDFSH 598
Query: 584 GKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG 643
+ + E L+ +E IVN +I+ +V ++E + AK G A+FGE Y D VRV+++G
Sbjct: 599 FEAIKAEQLKALEDIVNAEIRRNTEVETEETDIDTAKA-KGAMALFGEKYGDQVRVLSMG 657
Query: 644 RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 703
S ELCGGTH+S T + F + SE G+A G+RRI AVT A
Sbjct: 658 G---------------DFSVELCGGTHVSRTGDIGLFKITSEGGVAAGVRRIEAVTGAAA 702
Query: 704 YKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQV 763
A KE AS ++GS + ++ K+ L +
Sbjct: 703 LAYLNGAEEQLKEA--ASLVKGS----------------------RDNLLDKLGALLERN 738
Query: 764 RKAQKKVAEENLQKAVKVATETAEAAAS--NGKPFCISRVEVGLDAAAVREAVLKVIEQK 821
R +K++ E+ KA A + AAA G +R++ GLD A+ V ++ +
Sbjct: 739 RSLEKEL-EQLKAKAASAAGDDLSAAAVEIKGAKVLAARLD-GLDGKALLALVDQLKNKL 796
Query: 822 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQ 881
G V++ E K V+ AGV + D + QL+ E L G G G+ +A G
Sbjct: 797 GRAVILLG-GELDGKVVLVAGVTQ--DLTGQLKAGE-LMKQAAAAVGGKGGGRPDMAQGG 852
Query: 882 GTDAAQVTPAMDLAAEFAAMKL 903
GT+AA++ A+ LA F L
Sbjct: 853 GTNAAKLDEALALAQRFVEQGL 874
>sp|A8GA09|SYA_SERP5 Alanine--tRNA ligase OS=Serratia proteamaculans (strain 568)
GN=alaS PE=3 SV=2
Length = 875
Score = 563 bits (1450), Expect = e-159, Method: Compositional matrix adjust.
Identities = 340/919 (36%), Positives = 505/919 (54%), Gaps = 103/919 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSK--LTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGN 58
MNQ+K +FLG L K +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN
Sbjct: 44 MNQFKDVFLG-------LDKRAYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGN 96
Query: 59 WSFGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFL- 115
+SFGDYFK++AI +AWELLT + LP +RL+ T + D+EA DIW + +
Sbjct: 97 FSFGDYFKHDAISYAWELLTGENWFNLPKERLWVTVY--------ETDDEAFDIWQQQIG 148
Query: 116 -PASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTC 165
PA R++ G DNFW+MGDTGPCGPC+EI YD + D
Sbjct: 149 VPAERIIRIGDNKGGAFASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRY 208
Query: 166 IEIWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQ 225
IEIWN+VF+QFNR+SDG++ PLP VDTG+G ER+ ++LQ+ SNY+ D+F + A+
Sbjct: 209 IEIWNLVFMQFNRQSDGTMLPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFSKLIAAVA 268
Query: 226 QATGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRA 285
+ TGA K + RV+ADHIR+ +F ++DG P NEGR YVLRRI+RRA
Sbjct: 269 KVTGATDLDNK-----------SLRVIADHIRSCAFLVSDGVTPSNEGRGYVLRRIIRRA 317
Query: 286 VRYGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIE 345
VR+G+ +L A+D FF LV +++VMG ELK++++ + +++ EE F +TL +G+
Sbjct: 318 VRHGN-MLGAKDTFFYKLVAPLIEVMGPAADELKRQQSLVEQVLKTEEDQFARTLERGLT 376
Query: 346 KFKKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERS 405
+ ++QG L G+ AF L+DTYGFP+DLT + ERGL VD GF AM+ R R+
Sbjct: 377 LLDEELANLQGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRA 436
Query: 406 RSAQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV 465
R + AD + + G F + +S + A++ + + +
Sbjct: 437 RESSG--------FGADYNSMIRVDGA----SQFSGYDHEQQQSTVTALFRDGQPVNEIH 484
Query: 466 PGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRF 525
G E +VL + FY E GGQ+ D+G ++ F V + Q YG + H G L+ G+
Sbjct: 485 AGEEAVVVLDETPFYGESGGQVGDKGVLKAANADFEVSDTQKYGQAIGHQGKLSHGS--L 542
Query: 526 SVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGK 585
V + V K+D RR I NH+ TH+L+ ALR+ LG+HV QKGS+V + LRFDFSH +
Sbjct: 543 KVNDRVDAKIDTVRRNRIRLNHSATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFE 602
Query: 586 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK 645
+ PE +R +E +VN+QI+ L V ++ L +AK G A+FGE Y D VRV+ +G
Sbjct: 603 AMKPEQIRTVEDLVNQQIRRNLPVQTEVMALDDAKG-KGAMALFGEKYDDNVRVLTMG-- 659
Query: 646 VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK 705
S ELCGGTH S T + F +LSE G A GIRRI AVT A
Sbjct: 660 --------------DFSTELCGGTHASRTGDIGLFRILSESGTAAGIRRIEAVTGDGAIA 705
Query: 706 AFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRK 765
L ++V A + ++ K+ + ++ R
Sbjct: 706 TLHQQNDLLQDV------------------------AHLVKGDSNNLTDKVRAVLDRTRA 741
Query: 766 AQKKVAE-ENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+K++ + ++ Q A + A+ +++A NG +S+++ ++A +R V + Q G
Sbjct: 742 LEKELQQLKDQQAAQESASLSSKAKMVNGVQLLVSQLD-NVEAKMLRTMVDDLKNQLGSA 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T +K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-TADDKVSLIAGVTK--DLTDRVKAGELIGNVAQQVGGKGG-GRPDMAQAGGTD 856
Query: 885 AAQVTPAMDLAAEFAAMKL 903
+ + A+D + A KL
Sbjct: 857 VSALPAALDSVEAWVASKL 875
>sp|A4SGJ6|SYA_PROVI Alanine--tRNA ligase OS=Prosthecochloris vibrioformis (strain DSM
265) GN=alaS PE=3 SV=2
Length = 885
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 359/853 (42%), Positives = 466/853 (54%), Gaps = 125/853 (14%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FL +RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWS
Sbjct: 42 MNQFKDVFLAKG-----TRSYSRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLPAS 118
FGDY+K EAI WAWELLT V++LP +RLYAT + D+E+ IW + +
Sbjct: 97 FGDYYKEEAITWAWELLTVVWKLPEERLYATVY--------HDDDESFRIWEEKTSIRPD 148
Query: 119 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 178
+L FG KDNFWEMG+TGPCGPCSEIH D T + +LVN DDP IE+WN+VFIQ++R
Sbjct: 149 HILRFGDKDNFWEMGETGPCGPCSEIHIDLTPDGSGRALVNADDPQAIELWNLVFIQYDR 208
Query: 179 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 238
+ DG L+PLP +HVDTG+GFER+ +++Q K SNYDTDVF P+FD I + TG + G
Sbjct: 209 QVDGRLEPLPQRHVDTGMGFERVCAVMQGKSSNYDTDVFRPLFDTITELTGV-----EYG 263
Query: 239 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 298
A D D+A RV+ADH RTLSFA++DG+ P NEGR YVLRRILRRA+RY + L
Sbjct: 264 ASMHDPQDIAMRVIADHARTLSFALSDGAMPSNEGRGYVLRRILRRALRYAKD-LGYNKP 322
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQGK- 357
+ LV V MGDVFPEL+ R+ + I+ AEE SF TL +GIE F V+G+
Sbjct: 323 ILHRLVATVADSMGDVFPELRDRQDAVARIVKAEEESFLVTLDRGIEIFNGLVGKVRGEG 382
Query: 358 --VLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS-AQNKQAG 414
L G+DAF L+DTYGFP DLT+LMA GL VD EGF M E + R+R + KQ G
Sbjct: 383 SSTLEGEDAFKLYDTYGFPFDLTRLMASSAGLQVDGEGFERCMQEQKTRARQDRREKQRG 442
Query: 415 GAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVV----PGNEV 470
GA + + WF D + Y G E S++ +
Sbjct: 443 GA--------------------EEGSWEWFSDLHATEFTGYDGLEADASIIGISRSKKNL 482
Query: 471 GIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI--------------- 515
+VL + FYAE GGQ D G+IE V + Q G +H+
Sbjct: 483 LLVLDRTPFYAESGGQTGDRGWIETGEYRLEVTDTQKDGDSFVHVVTRAFDNVRDSEADP 542
Query: 516 GSLTEGAGRFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPE 575
+ G GR V VD R+ NHT TH+L+ LR LG HV QKGS+V PE
Sbjct: 543 ADIAVGPGR------VHASVDRKLRQATERNHTATHLLHAVLRHTLGAHVQQKGSLVNPE 596
Query: 576 KLRFDFSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKC------INGLRAVF 629
+LRFDFSH + PE + +ES VN+ I+ EATL A G A F
Sbjct: 597 RLRFDFSHFSKLTPEEIDAVESAVNDCIR------QAEATLKHADVPYDDAITKGALAFF 650
Query: 630 GEVYPDPVRVVAIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIA 689
G+ Y D VRVV I IS ELCGGTH+ N + F ++ E +A
Sbjct: 651 GDKYADLVRVVEIP----------------GISVELCGGTHVDNVGQIGLFKIVGESSVA 694
Query: 690 KGIRRITAVTTGLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKK 749
G+RRI A+T A E + +E+ D ++ LK K + PA
Sbjct: 695 AGVRRIEALT---GRAAEELMWNEYRELHDVRQL-----------LKMKAEEP--PAE-- 736
Query: 750 ADIRAKIALLQNQVRKAQKKVAEENLQKAVKVATETAEAAASNGKPFC--ISRVEVGLDA 807
K+A + + R +K++AE L+ V + +A+A C ++RV G DA
Sbjct: 737 -----KVAAILEERRALEKQLAE--LKAEVLLVKLQGDASALEDVCGCRIVARVVDGADA 789
Query: 808 AAVREAVLKVIEQ 820
+R A + +Q
Sbjct: 790 EGLRYAAQMLRQQ 802
>sp|A6L1L8|SYA_BACV8 Alanine--tRNA ligase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=alaS PE=3 SV=1
Length = 871
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 312/708 (44%), Positives = 407/708 (57%), Gaps = 61/708 (8%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K I LG +K R ++QKC+R GKHNDL++VG DTYHHT FEMLGNWS
Sbjct: 42 MNQFKDIILGN-----HPAKYKRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDYFK EAI WAWE L V ++ LYAT F G + GL DNEA W +FLP +
Sbjct: 97 FGDYFKKEAIGWAWEYLVDVLKIDPKDLYATVFEGSPEEGLERDNEAASYWEQFLPKDHI 156
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAA-----SLVNNDDPTCIEIWNIVFIQ 175
L DNFWEMGDTGPCGPCSEIH D + A LVN D P IEIWN+VF+Q
Sbjct: 157 LNGNKHDNFWEMGDTGPCGPCSEIHIDSRSEEEKAQIPGNQLVNKDHPQVIEIWNLVFMQ 216
Query: 176 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 235
FNR++DGSL+ LPAK +DTG+GFERL LQ K SNYDTDVF PI AI + G
Sbjct: 217 FNRKADGSLEGLPAKVIDTGMGFERLVRTLQGKTSNYDTDVFQPILKAIAEMAGT----- 271
Query: 236 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 295
G D ++ D+A RV+ADHIRT++F+I DG P N YV+RRILRRAVRYG L
Sbjct: 272 TYGQD--NQKDIAMRVIADHIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQ 329
Query: 296 QDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ 355
+ F L+ ++++ MG+ +PEL ++ I ++I EE SF +TL GI K D +
Sbjct: 330 KQAFMYKLLPVLIENMGEAYPELNAQKTLIEKVIKEEEESFLRTLETGIRLLDKTMNDAK 389
Query: 356 G---KVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 412
K +SG DAF L+DT+GFPLDLT+L+ E G+ V+ E FN M + +ER+R+A +
Sbjct: 390 AAGKKEISGVDAFTLYDTFGFPLDLTELILRENGMTVNEEEFNAEMQKQKERARNAAAVE 449
Query: 413 AGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGI 472
G I + T H G T+ + ++ K + +Y I
Sbjct: 450 TGDWITIKEGDT---HFVGYDFTEYETSILRYRQIKQKNQTLYQ---------------I 491
Query: 473 VLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIG-SLTEGAGRFSVGEEV 531
VL+ + FYAE GGQ+ D G I F + + + + IHI L E + +
Sbjct: 492 VLSDTPFYAESGGQVGDTGVIVSEFETIEIIDTKKENNLPIHITKKLPE-----HLDVPM 546
Query: 532 ICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEH 591
+ VD ++R A NH+CTH+L+ ALR+VLG HV+QKGS+V PE LRFDFSH + V E
Sbjct: 547 MACVDTEKRAACAANHSCTHLLDEALRQVLGTHVEQKGSLVTPESLRFDFSHFQKVTDEQ 606
Query: 592 LRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLA 651
LR +E +VN +I+ + + E G A+FGE Y D VRVV G
Sbjct: 607 LREVEHLVNAKIRENIPLTEYRNLPIEKAKELGAIALFGEKYGDEVRVVQFGN------- 659
Query: 652 DPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 699
S E CGGTH+ T + ++SE +A G+RRI A+T
Sbjct: 660 ----------SIEFCGGTHVPATGKIGMVRIISESSVAAGVRRIEAIT 697
>sp|A6H0Y3|SYA_FLAPJ Alanine--tRNA ligase OS=Flavobacterium psychrophilum (strain
JIP02/86 / ATCC 49511) GN=alaS PE=3 SV=1
Length = 887
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 353/924 (38%), Positives = 507/924 (54%), Gaps = 104/924 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
M Q+K FLG P K R +TQKC+R GKHNDL+DVG DTYHHT FEMLGNWS
Sbjct: 42 MAQFKEYFLGNGTP-----KSPRIADTQKCLRVSGKHNDLEDVGFDTYHHTMFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDYFK EAI WAWELLT+VY++P LY + F G ++ + D EA DIW + R+
Sbjct: 97 FGDYFKKEAINWAWELLTEVYKIPKQNLYVSVFEGSKEDNVPFDQEAWDIWKGLIDEDRI 156
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYD-RTGNRDAA----SLVNNDDPTCIEIWNIVFIQ 175
+ KDNFWEMGD GPCGPCSEIH D RT A SLVNND P +EIWN VF++
Sbjct: 157 ILGNKKDNFWEMGDQGPCGPCSEIHVDLRTPEEKAQVSGKSLVNNDHPQVVEIWNNVFME 216
Query: 176 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 235
FNR++DGSL+ LPA+HVDTG+GFERL LQ K SNYDTDVF P+ + + Q TG + S
Sbjct: 217 FNRKADGSLEKLPAQHVDTGMGFERLCMALQGKTSNYDTDVFTPLIEKVTQITGYKYTSN 276
Query: 236 KVG--ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVL 293
+V +++ +K ++A RV+ DH+R ++FAIADG P N G YV+RRILRRA+RYG L
Sbjct: 277 EVKNISEEQNKTNIAIRVIVDHVRAVAFAIADGQLPSNTGAGYVIRRILRRAIRYGFTFL 336
Query: 294 KAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQD 353
++ F LV ++ MG+ FPE+K ++ + +I EEASF +TL +G++ K +
Sbjct: 337 DTKEPFITKLVAVLASQMGEFFPEIKSQQQLVTNVIREEEASFLRTLEQGLQLLDKVVAE 396
Query: 354 VQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQA 413
+GK +SG AF L+DT+GFP+DLT L+ E+G +D GFN AM E + RSR+A
Sbjct: 397 TKGKEVSGAKAFELYDTFGFPIDLTALILREKGYELDEAGFNAAMQEQKNRSRAASE--- 453
Query: 414 GGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGIV 473
V D + VL + F+ + ++ +K T + S G IV
Sbjct: 454 ----VFTEDWS-------VLIPGNIETFVGYDKTENDVKI--TRIRKVNSKKDGILYQIV 500
Query: 474 LASSSFYAEQGGQIFDEGFI---------EGLFGSFYVRNVQIYGGFVIHIG-SLTEGAG 523
L ++ FY E GGQ+ D+G + E + + + + ++H L E
Sbjct: 501 LDNTPFYPEGGGQVGDKGTLVSANDSSDSEQAKQTIDIIDTKKENNLILHFAKQLPE--- 557
Query: 524 RFSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSH 583
++ + KV+ + R + NH+ TH+++ ALR +LG HV+QKGS+V P+ LRFDFSH
Sbjct: 558 --NIETGFVAKVNTNLRASTSKNHSATHLMHLALRSILGTHVEQKGSLVNPDYLRFDFSH 615
Query: 584 GKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIG 643
V + LR++E+ VN QI+A+L + + G A+FGE Y D VR++ G
Sbjct: 616 FSKVSDDQLRQVEASVNAQIEAQLQLTEHRNIPIKEALDKGAMALFGEKYGDNVRMIEFG 675
Query: 644 RKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLA 703
S ELCGG H+ NT + F +LSE +A GIRRI A+ TG A
Sbjct: 676 E-----------------SKELCGGIHVKNTAQIWHFKILSEGAVAAGIRRIEAI-TGDA 717
Query: 704 YKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQV 763
KAF E T++ +K + K DI + LQ+
Sbjct: 718 VKAFYTNQ-----------------ENTLSEIKEVL-------KKPQDILKSVTSLQDDN 753
Query: 764 RKAQKKVAEENLQKAVKVATET--AEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQK 821
K +K++ E+ L++ ++ T +E NG F +V++ + ++ ++ + + K
Sbjct: 754 VKLKKQI-EQLLKEKIEGLKNTLVSEFQEINGINFLSKQVDLSM--SSTKDLLQALGSLK 810
Query: 822 GMPVMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTA--ALQPLKGRCGKGKGG--- 876
+V ++ E + C +K+L + L A ++ L G+ +G GG
Sbjct: 811 PNSFVVLASIEENMPNIHCY-------IAKELVAGKGLNANVVIKEL-GKYIEGNGGGQP 862
Query: 877 -LASGQGTDAAQVTPAMDLAAEFA 899
ASG+G + + + A+ A EF
Sbjct: 863 FFASGKGKNVSGIKEALQKAIEFV 886
>sp|Q3ATN3|SYA_CHLCH Alanine--tRNA ligase OS=Chlorobium chlorochromatii (strain CaD3)
GN=alaS PE=3 SV=1
Length = 886
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 354/877 (40%), Positives = 480/877 (54%), Gaps = 114/877 (12%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FL RA +TQKCIRA GKHNDL+DVG+DTYHHTFFEMLGNWS
Sbjct: 42 MNQFKDVFLDKGS-----RPYVRAADTQKCIRASGKHNDLEDVGRDTYHHTFFEMLGNWS 96
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKF--LPAS 118
FGDY+K EAI WAWEL T V++LP +RLYAT + D+E+ IW + +
Sbjct: 97 FGDYYKLEAITWAWELFTVVWKLPKERLYATVY--------QDDDESFQIWKEQTDINPD 148
Query: 119 RVLPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAASLVNNDDPTCIEIWNIVFIQFNR 178
+L FG KDNFWEMG+TGPCGPCSEIH D T + LVN D IE+WN+VFIQ+NR
Sbjct: 149 HILRFGDKDNFWEMGETGPCGPCSEIHIDLTPDGSGKELVNVGDYRVIELWNLVFIQYNR 208
Query: 179 ESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSGKVG 238
+SDG L+PLP KHVDTG+GFER+ +++Q K SNYD+DVF P+FD I + TG R Y +
Sbjct: 209 QSDGHLEPLPKKHVDTGMGFERIVAVMQGKGSNYDSDVFQPLFDKITEITGVR-YGASLD 267
Query: 239 ADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKAQDG 298
A + D+A RV+ADH RTL+FA++DG+ P NEGR YVLRRILRRA+RY S L
Sbjct: 268 APN----DIAMRVIADHARTLTFALSDGAMPSNEGRGYVLRRILRRALRY-SRNLGYHQP 322
Query: 299 FFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ--- 355
+ LV + MG+VFPEL QR+ + II AEE SF TL +GI+ F + + ++
Sbjct: 323 ILHQLVGTLALAMGEVFPELVQRQEAVSAIIKAEEESFIVTLDRGIDLFSELVEKLRASN 382
Query: 356 GKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQAGG 415
GKV++G DAF L+DTYGFP DLT+LMA + G VD EGF + M E + R+RS + ++
Sbjct: 383 GKVIAGSDAFRLYDTYGFPFDLTRLMAADEGFEVDGEGFEHCMQEQKNRARSDRREKQ-- 440
Query: 416 AIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIY---TGSEFIESVVPGN-EVG 471
DD K+ WF D ++ Y S I + GN ++
Sbjct: 441 -----------------RVDDDGAKWQWFSDVRASQFVGYDHLVHSATITGIRQGNGKLL 483
Query: 472 IVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHI---------GSLTEGA 522
+VL ++ FYAE GGQ D G++E +V + G ++H+ S +
Sbjct: 484 LVLDATPFYAESGGQTGDNGWLENSRYRLHVADTVKDGDAIVHVVSDAFDKVQDSAVQPE 543
Query: 523 GRFSVGEEVICKVDYDR--RKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFD 580
V +E+ R R+ NHT TH+++ ALR +LG+HV QKGS V PE+LRFD
Sbjct: 544 DVEIVEQELAVAASVHRTARQDAERNHTATHLMHAALRRILGEHVQQKGSFVSPERLRFD 603
Query: 581 FSHGKPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVV 640
FSH + E + +E VN QI+ V L + G A FG+ Y D VRVV
Sbjct: 604 FSHFSKLTDEEIEAVEIAVNTQIREAEPVVKHADVLFDDAVAKGALAFFGDKYADRVRVV 663
Query: 641 AIGRKVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTT 700
I +S ELCGGTH+ N F ++SE +A G+RRI AVT
Sbjct: 664 EIP----------------GMSVELCGGTHVDNIGRIGLFKIISEASVASGVRRIEAVTG 707
Query: 701 GLAYKAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQ 760
A K E L++ LK+K D A + K+A L
Sbjct: 708 KAAEKLLWQ--------------EYRELQQIRQLLKAKGDEAVVE---------KVAGLM 744
Query: 761 NQVRKAQKKVAE-------ENLQKAVKVATETA-------EAAASNGKPFCISRVEVGL- 805
+ ++ +K++AE E L A++ A E + E ++G+ + + + L
Sbjct: 745 DSKKELEKELAESRAAALVEQLTAALQAAPEVSGCRVLAIEVKNNDGE--TMRQATMALR 802
Query: 806 DAAAVREAVLKVIEQKGMPVMVFSTDETTNKAVVCAG 842
D A +L +E + ++ F+TDE + AG
Sbjct: 803 DKAPCAVGLLATVEAGKVVLVSFATDEAVRTCSLDAG 839
>sp|A8ANQ1|SYA_CITK8 Alanine--tRNA ligase OS=Citrobacter koseri (strain ATCC BAA-895 /
CDC 4225-83 / SGSC4696) GN=alaS PE=3 SV=1
Length = 875
Score = 555 bits (1430), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/897 (38%), Positives = 496/897 (55%), Gaps = 97/897 (10%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT + LP DRL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTGENWFALPKDRLWVTVY--------ETDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAAYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNY+ D+F + +A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFRTLIEAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVVPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG ELK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEELKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPG 467
A AD A + G FK + + A++ + ++++ G
Sbjct: 439 ASG--------FGADYNAMIRVDGA----SEFKGYDHLELNGKVTALFVDGKAVDAISAG 486
Query: 468 NEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSV 527
E +VL + FYAE GGQ+ D+G ++G +F V + Q YG + HIG+L+ G+ V
Sbjct: 487 QEAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVSDTQKYGQAIGHIGTLSTGS--LKV 544
Query: 528 GEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPV 587
G+ V VD RR I NH+ TH+++ ALR++LG HV QKGS+V + LRFDFSH + +
Sbjct: 545 GDAVQADVDDARRARIRLNHSATHLMHAALRQILGTHVAQKGSLVNDKVLRFDFSHNEAM 604
Query: 588 DPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVE 647
P +R +E +VN QI+ L V + L AK G A+FGE Y D VRV+++G
Sbjct: 605 KPSEIRAVEDLVNAQIRRNLPVETNIMDLEAAKA-KGAMALFGEKYDDRVRVLSMG---- 659
Query: 648 DLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYKAF 707
S ELCGGTH S T + F ++SE G A G+RRI AVT
Sbjct: 660 ------------DFSTELCGGTHASRTGDIGLFRIVSESGTAAGVRRIEAVT------GE 701
Query: 708 EAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRKAQ 767
A +L E D S I LL+ +L KV + + L+ ++++ +
Sbjct: 702 GAIATLHAESDRLSDI-AQLLKGDSQNLGEKV----------RSVLERTRQLEKELQQLK 750
Query: 768 KKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMPVMV 827
++ A A + A +++A NG +S + G++ +R V + Q G V+V
Sbjct: 751 EQAA------AQESANLSSKAVDINGVKLLVSEL-AGVEPKMLRTMVDDLKNQLGSTVIV 803
Query: 828 FSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
+T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 804 LAT-VAEGKVSLIAGVSK--DVTDRVKAGELVGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|B1IUY2|SYA_ECOLC Alanine--tRNA ligase OS=Escherichia coli (strain ATCC 8739 / DSM
1576 / Crooks) GN=alaS PE=3 SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPANENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNTQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|Q8X3W8|SYA_ECO57 Alanine--tRNA ligase OS=Escherichia coli O157:H7 GN=alaS PE=3 SV=2
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFVVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 TTVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|Q1R804|SYA_ECOUT Alanine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC)
GN=alaS PE=3 SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 498/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF+ AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|A1AEN7|SYA_ECOK1 Alanine--tRNA ligase OS=Escherichia coli O1:K1 / APEC GN=alaS PE=3
SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 498/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNESRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF+ AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|Q7UBU3|SYA_SHIFL Alanine--tRNA ligase OS=Shigella flexneri GN=alaS PE=3 SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 341/900 (37%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V +D RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADIDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMNLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 TTVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|Q0T1C3|SYA_SHIF8 Alanine--tRNA ligase OS=Shigella flexneri serotype 5b (strain 8401)
GN=alaS PE=3 SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 341/900 (37%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V +D RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADIDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMNLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 TTVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|Q0TEI3|SYA_ECOL5 Alanine--tRNA ligase OS=Escherichia coli O6:K15:H31 (strain 536 /
UPEC) GN=alaS PE=3 SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSERLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|Q3YYG6|SYA_SHISS Alanine--tRNA ligase OS=Shigella sonnei (strain Ss046) GN=alaS PE=3
SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 TTVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|A7ZQC5|SYA_ECO24 Alanine--tRNA ligase OS=Escherichia coli O139:H28 (strain E24377A /
ETEC) GN=alaS PE=3 SV=1
Length = 876
Score = 555 bits (1429), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 TTVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|P00957|SYA_ECOLI Alanine--tRNA ligase OS=Escherichia coli (strain K12) GN=alaS PE=1
SV=2
Length = 876
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNTQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|B1XCM5|SYA_ECODH Alanine--tRNA ligase OS=Escherichia coli (strain K12 / DH10B)
GN=alaS PE=3 SV=1
Length = 876
Score = 554 bits (1428), Expect = e-157, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNTQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VVEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|A8A3H4|SYA_ECOHS Alanine--tRNA ligase OS=Escherichia coli O9:H4 (strain HS) GN=alaS
PE=3 SV=1
Length = 876
Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|B2U049|SYA_SHIB3 Alanine--tRNA ligase OS=Shigella boydii serotype 18 (strain CDC
3083-94 / BS512) GN=alaS PE=3 SV=1
Length = 876
Score = 554 bits (1427), Expect = e-156, Method: Compositional matrix adjust.
Identities = 342/900 (38%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L AG
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLA--AGS 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRVVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 TTVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|A4WDQ6|SYA_ENT38 Alanine--tRNA ligase OS=Enterobacter sp. (strain 638) GN=alaS PE=3
SV=1
Length = 875
Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust.
Identities = 343/900 (38%), Positives = 496/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQYAWELLTGENWFNLPKERLWVTVY--------ETDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGTAEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR+ DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + ++ +
Sbjct: 211 IWNIVFMQFNRQIDGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFSTLIKSVAEV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVIPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A+D FF LV +V VMGD ELK++++ + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKDTFFYKLVGPLVGVMGDAGEELKRQQSQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELSQLTGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQ--DHKSVIKAIYTGSEFIESVV 465
+ AD A ++ D + +F + + + + A++ + ++S+
Sbjct: 439 SSG--------FGADYNA------MIRVDSASEFQGYDRLELNAKVTALFVDGKAVDSIS 484
Query: 466 PGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRF 525
G + +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L G+
Sbjct: 485 AGQDAVVVLDKTPFYAESGGQVGDKGELKGNGFSFAVSDTQKYGQAIGHIGKLASGS--L 542
Query: 526 SVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGK 585
VGE V +VD RR+ I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH +
Sbjct: 543 KVGEGVQAEVDEARRERIRLNHSATHLMHAALRDVLGTHVAQKGSLVNDKILRFDFSHFE 602
Query: 586 PVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRK 645
+ P +R +E +VN QI+ L + + L A+ G A+FGE Y + VRV+++G
Sbjct: 603 AMKPSEIRAVEDMVNAQIRRNLPIETNIMDLEAARA-KGAMALFGEKYDERVRVLSMG-- 659
Query: 646 VEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAYK 705
S ELCGGTH S T + F +LSE G A G+RRI AVT
Sbjct: 660 --------------DFSTELCGGTHASRTGDIGLFRILSESGTAAGVRRIEAVT------ 699
Query: 706 AFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVRK 765
A SL E D I LL+ +L KV A + R+
Sbjct: 700 GEGAIASLHAESDQLHDI-AQLLKGDSHNLGEKVRSAL-----------------ERSRQ 741
Query: 766 AQKKVAEENLQKAVK-VATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+K++ + Q AV+ A +++A G +S + G++ +R V + Q G
Sbjct: 742 LEKELQQLKEQAAVQESANLSSKAVDIKGVKLLVSEL-AGVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-AVDGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|B1LQ15|SYA_ECOSM Alanine--tRNA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC)
GN=alaS PE=3 SV=1
Length = 876
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 341/900 (37%), Positives = 497/900 (55%), Gaps = 103/900 (11%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K +FLG N +RA +Q+C+RAGGKHNDL++VG HHTFFEMLGN+S
Sbjct: 44 MNQFKDVFLGLDKRN-----YSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFS 98
Query: 61 FGDYFKNEAIEWAWELLT--KVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLK--FLP 116
FGDYFK++AI++AWELLT K + LP +RL+ T + D+EA +IW K +P
Sbjct: 99 FGDYFKHDAIQFAWELLTSEKWFALPKERLWVTVY--------ESDDEAYEIWEKEVGIP 150
Query: 117 ASRVLPFG-------CKDNFWEMGDTGPCGPCSEIHYDRTGN--RDAASLVNNDDPTCIE 167
R++ G DNFW+MGDTGPCGPC+EI YD + D IE
Sbjct: 151 RERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIE 210
Query: 168 IWNIVFIQFNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQA 227
IWNIVF+QFNR++DG+++PLP VDTG+G ER+ ++LQ+ SNYD D+F + A+ +
Sbjct: 211 IWNIVFMQFNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKV 270
Query: 228 TGARPYSGKVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVR 287
TGA S K + RV+ADHIR+ +F IADG P NE R YVLRRI+RRAVR
Sbjct: 271 TGATDLSNK-----------SLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVR 319
Query: 288 YGSEVLKAQDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKF 347
+G+ +L A++ FF LV ++ VMG +LK+++A + +++ EE F +TL +G+
Sbjct: 320 HGN-MLGAKETFFYKLVGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALL 378
Query: 348 KKAAQDVQGKVLSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRS 407
+ + G L G+ AF L+DTYGFP+DLT + ER + VD GF AM+E R R+R
Sbjct: 379 DEELAKLSGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 408 AQNKQAGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSV---IKAIYTGSEFIESV 464
A AD A ++ D + +F + DH + + A++ + ++++
Sbjct: 439 ASG--------FGADYNA------MIRVDSASEFKGY-DHLELNGKVTALFVDGKAVDAI 483
Query: 465 VPGNEVGIVLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGR 524
G E +VL + FYAE GGQ+ D+G ++G SF V + Q YG + HIG L G+
Sbjct: 484 NAGQEAVVVLDQTPFYAESGGQVGDKGELKGANFSFAVEDTQKYGQAIGHIGKLATGS-- 541
Query: 525 FSVGEEVICKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHG 584
VG+ V VD RR I NH+ TH+++ ALR+VLG HV QKGS+V + LRFDFSH
Sbjct: 542 LKVGDAVQADVDEARRARIRLNHSATHLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHN 601
Query: 585 KPVDPEHLRRIESIVNEQIKAELDVFSKEATLAEAKCINGLRAVFGEVYPDPVRVVAIGR 644
+ + PE +R +E +VN QI+ L + + L AK G A+FGE Y + VRV+++G
Sbjct: 602 EAMKPEEIRAVEDLVNAQIRRNLPIETNIMDLEAAKA-KGAMALFGEKYDERVRVLSMG- 659
Query: 645 KVEDLLADPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVTTGLAY 704
S ELCGGTH S T + F ++SE G A G+RRI AVT A
Sbjct: 660 ---------------DFSTELCGGTHASRTGDIGLFRIISESGTAAGVRRIEAVTGEGAI 704
Query: 705 KAFEAACSLEKEVDDASKIEGSLLEKTVASLKSKVDGAAIPAPKKADIRAKIALLQNQVR 764
A EV LL+ +L KV + + L+ +++
Sbjct: 705 ATVHADSDRLSEV-------AHLLKGDSNNLADKV----------RSVLERTRQLEKELQ 747
Query: 765 KAQKKVAEENLQKAVKVATETAEAAASNGKPFCISRVEVGLDAAAVREAVLKVIEQKGMP 824
+ +++ A A + A +++A NG +S + G++ +R V + Q G
Sbjct: 748 QLKEQAA------AQESANLSSKAIDVNGVKLLVSELS-GVEPKMLRTMVDDLKNQLGST 800
Query: 825 VMVFSTDETTNKAVVCAGVPEKSDQSKQLEVSEWLTAALQPLKGRCGKGKGGLASGQGTD 884
++V +T K + AGV + D + +++ E + Q + G+ G G+ +A GTD
Sbjct: 801 IIVLAT-VAEGKVSLIAGVSK--DVTDRVKAGELIGMVAQQVGGKGG-GRPDMAQAGGTD 856
>sp|Q5LHE6|SYA_BACFN Alanine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 /
NCTC 9343) GN=alaS PE=3 SV=1
Length = 872
Score = 553 bits (1425), Expect = e-156, Method: Compositional matrix adjust.
Identities = 309/708 (43%), Positives = 417/708 (58%), Gaps = 61/708 (8%)
Query: 1 MNQYKPIFLGTADPNTQLSKLTRACNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWS 60
MNQ+K I LG +K R ++QKC+R GKHNDL++VG DTYHHT FEMLGNWS
Sbjct: 43 MNQFKDIILGN-----HPAKYHRVADSQKCLRVSGKHNDLEEVGHDTYHHTMFEMLGNWS 97
Query: 61 FGDYFKNEAIEWAWELLTKVYRLPADRLYATYFGGDEKAGLAPDNEARDIWLKFLPASRV 120
FGDYFK EAI WAWE L V +L + LYAT F G + GL DNEA W ++LP +
Sbjct: 98 FGDYFKKEAISWAWEYLVDVLKLNPEHLYATVFEGSPEEGLERDNEAASYWEQYLPKDHI 157
Query: 121 LPFGCKDNFWEMGDTGPCGPCSEIHYDRTGNRDAAS-----LVNNDDPTCIEIWNIVFIQ 175
+ DNFWEMGDTGPCGPCSEIH D + A LVN+D P IEIWN+VF+Q
Sbjct: 158 INGNKHDNFWEMGDTGPCGPCSEIHIDLRPAEERAKISGRDLVNHDHPQVIEIWNLVFMQ 217
Query: 176 FNRESDGSLKPLPAKHVDTGLGFERLTSILQNKMSNYDTDVFMPIFDAIQQATGARPYSG 235
+NR++D +L+PLPAK +DTG+GFERL LQ K SNYDTDVF P+ AI Q G
Sbjct: 218 YNRKADSTLEPLPAKVIDTGMGFERLCMALQGKTSNYDTDVFQPLIKAIAQMAGT----- 272
Query: 236 KVGADDADKVDMAYRVVADHIRTLSFAIADGSCPGNEGREYVLRRILRRAVRYGSEVLKA 295
+ G ++ + D+A RV+ADHIRT++F+I DG P N YV+RRILRRAVRYG L
Sbjct: 273 EYGKNEQN--DIAMRVIADHIRTIAFSITDGQLPSNAKAGYVIRRILRRAVRYGYTFLGQ 330
Query: 296 QDGFFNGLVNIVVKVMGDVFPELKQREAHIREIIAAEEASFGKTLLKGIEKFKKAAQDVQ 355
+ F L+ +++ MGD +PEL ++ I ++I EE SF +TL GI K D +
Sbjct: 331 KQAFMYKLLPVLIDSMGDAYPELIAQKELIEKVIKEEEESFLRTLETGIRLLDKTMADTK 390
Query: 356 --GKV-LSGQDAFILWDTYGFPLDLTQLMAEERGLLVDIEGFNNAMDEARERSRSAQNKQ 412
GK +SG+DAF L+DT+GFPLDLT+L+ E G+ V++E F+ M + ++R+R+A +
Sbjct: 391 ANGKTEISGKDAFTLYDTFGFPLDLTELILRENGMTVNVEEFDAEMQQQKQRARNAAAIE 450
Query: 413 AGGAIVMDADATAALHKRGVLATDDSFKFIWFQDHKSVIKAIYTGSEFIESVVPGNEVGI 472
G I++ T + G T+ + ++ K + +Y I
Sbjct: 451 TGDWIILKEGTTEFV---GYDYTEYETSILRYRQVKQKNQTLYQ---------------I 492
Query: 473 VLASSSFYAEQGGQIFDEGFIEGLFGSFYVRNVQIYGGFVIHIGSLTEGAGRFSVGEEVI 532
VL + FYAE GGQ+ D G + F + V + + IHI T+ +
Sbjct: 493 VLDYTPFYAESGGQVGDTGVLVNEFETIEVIDTKKENNLPIHI---TKKLPEHPEAPMMA 549
Query: 533 CKVDYDRRKLIAPNHTCTHMLNFALREVLGDHVDQKGSVVLPEKLRFDFSHGKPVDPEHL 592
C VD D+R A NH+ TH+L+ ALREVLG+HV+QKGS+V P+ LRFDFSH + V E L
Sbjct: 550 C-VDTDKRAACAANHSATHLLDEALREVLGEHVEQKGSLVTPDSLRFDFSHFQKVTDEEL 608
Query: 593 RRIESIVNEQIKAELDVFS-KEATLAEAKCINGLRAVFGEVYPDPVRVVAIGRKVEDLLA 651
R++E +VN +I+A + + + + EAK + G A+FGE Y D VRV+ G
Sbjct: 609 RKVEHLVNAKIRANVPLQEHRNIPIEEAKEL-GAIALFGEKYGDHVRVIQFGS------- 660
Query: 652 DPENKEWLSISAELCGGTHLSNTREAEAFALLSEEGIAKGIRRITAVT 699
S E CGGTH++ T ++SE +A G+RRI A T
Sbjct: 661 ----------SIEFCGGTHVAATGNIGMVKIISESSVAAGVRRIEAYT 698
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,168,965
Number of Sequences: 539616
Number of extensions: 15026226
Number of successful extensions: 50103
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 343
Number of HSP's that attempted gapping in prelim test: 42398
Number of HSP's gapped (non-prelim): 1326
length of query: 904
length of database: 191,569,459
effective HSP length: 127
effective length of query: 777
effective length of database: 123,038,227
effective search space: 95600702379
effective search space used: 95600702379
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)