BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002587
(904 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZW07|PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis thaliana GN=APUM1 PE=1 SV=1
Length = 968
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/913 (51%), Positives = 596/913 (65%), Gaps = 133/913 (14%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGL- 74
DY +++G L+ EQ+++Q A +LE+ELN+FRSGSAPPTV+GS+S+ GL
Sbjct: 22 DYEKEIGVLLGEQQRRQ----------VEADELERELNLFRSGSAPPTVDGSVSAAGGLF 71
Query: 75 ----------FKKLSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFT 124
F ++ G ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 72 SGGGGAPFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRVA 131
Query: 125 QRLRGGGEV-GGIGDRRK--GNGSLFAVQPGFGGKEEENSGGSGGGGEWGGDGLIGLPGL 181
QRL+G V GG+GDRRK N SLF++ PGF G E +G S EW +GLIGLPGL
Sbjct: 132 QRLKGSNNVLGGVGDRRKVNDNRSLFSMPPGFEG---EKTGASAS--EWDANGLIGLPGL 186
Query: 182 GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLSSIDGL 241
GLG +QKS A+I Q DM HG PV++ PSRP SRN F++ ++S+ + L
Sbjct: 187 GLGGKQKSFADIFQADMGHGHPVAQQPSRPASRNTFDENVDSN--------------NNL 232
Query: 242 GSSANKQGMPSAQSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAGVGRASS 301
SA +Q IG + +SYA+ LG+SLSR+ TPDPQ +AR PSP + G GR SS
Sbjct: 233 SPSA-------SQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGSGRMSS 285
Query: 302 MDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTD-GVADQENNSRSQNQHEIDD-RH 359
DKR S P NGV+ L +S+++V ALSGLNLS G+ D RSQ + +++ R+
Sbjct: 286 NDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSCSVGLDD-----RSQAEQDVEKVRN 340
Query: 360 SLFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNASLMADG 419
+F LQG + QH F +S+ H
Sbjct: 341 YMFGLQGGHNEVNQHEFPNKSDQAH----------------------------------- 365
Query: 420 HKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSPSMMGS 479
K+ S NS L+GP NGG + +Q + + N+ LN Y++NP+ SMM +
Sbjct: 366 -KATGSLRNSQLRGPHGSAYNGGVGLANPYQQLDS-----PNYCLNNYALNPAVASMMAN 419
Query: 480 PIGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLGNHT-- 535
+G+ N P+Y+N SA+ +G+D+R + G N+ +E +++ R N
Sbjct: 420 QLGNNNFAPMYDNV---SALGFSGMDSRHHGRGFVSSGQNL----SESRNLGRFSNRMMG 472
Query: 536 AGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDI----GNSYMDLLGLQKAYLGAL 591
G+ LQ+ ++DP+Y QY A + LNDP+MD G+SYMD+L LQ+AYLGA
Sbjct: 473 GGAGLQSHMVDPMYNQY-------ADSLDLLNDPSMDRNFMGGSSYMDMLELQRAYLGA- 524
Query: 592 LSPQKSQYGVPYLNKSGSLNNN-LYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHG 646
QKSQYGVPY KSGS N++ YG+P FG MSYPG PL +PNS + SP+R
Sbjct: 525 ---QKSQYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRD 579
Query: 647 DRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVE 706
+ NMRFPS RN SGG+MG WH +A S DE F SS+L+EFKSNKT+ FELSEIAGHVVE
Sbjct: 580 EVNMRFPSATRNYSGGLMGSWHMDA--SFDEGFGSSMLEEFKSNKTRGFELSEIAGHVVE 637
Query: 707 FSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVR 766
FS+DQYGSRFIQQKLETATT+EKNMV++EIMPQAL LMTDVFGNYVIQKFFEHG Q R
Sbjct: 638 FSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQRR 697
Query: 767 ELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQ 826
ELA++L HVL LSLQMYGCRVIQKAIEVV+LDQ+ +MVKELDGH+MRCVRDQNGNHV+Q
Sbjct: 698 ELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQ 757
Query: 827 KCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVC 886
KCIECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCHD TQS +M+EIL +V
Sbjct: 758 KCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVS 817
Query: 887 MLAQDQYGNYVVQ 899
MLAQDQYGNYVVQ
Sbjct: 818 MLAQDQYGNYVVQ 830
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 112/212 (52%), Gaps = 9/212 (4%)
Query: 696 ELSE-IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
EL+E + HV+ S YG R IQ+ +E ++K + +E+ + + D GN+V+Q
Sbjct: 698 ELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQ 757
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVV-ELDQQTQMVKELDGHIM 813
K E + + GHV+TLS YGCRVIQ+ +E + D Q+++++E+ +
Sbjct: 758 KCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVS 817
Query: 814 RCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKT 873
+DQ GN+V+Q +E D I+ ++V +S + V+++ L E+
Sbjct: 818 MLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEER 877
Query: 874 QSIMMDEIL------QSVCMLAQDQYGNYVVQ 899
+ ++++E+L + + + +DQ+ NYVVQ
Sbjct: 878 E-LLVNEMLGTTDENEPLQAMMKDQFANYVVQ 908
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETA-TTEEKNMVFQEIMPQALSLMTDVFGNYVI 753
F +S GHVV S YG R IQ+ LE + ++ V +EI+ L D +GNYV+
Sbjct: 770 FIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILSTVSMLAQDQYGNYVV 829
Query: 754 QKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH-- 811
Q EHG + + +L G ++ +S Q + V++K + +++ +V E+ G
Sbjct: 830 QHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTD 889
Query: 812 ----IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
+ ++DQ N+V+QK +E + + I+ + L + YG V+ R+
Sbjct: 890 ENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARI 946
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
Query: 748 FGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE 807
FG+ ++++F + T EL+ ++ GHV+ S YG R IQ+ +E D++ + +E
Sbjct: 610 FGSSMLEEFKSNKTRG--FELS-EIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEE 666
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ + + D GN+VIQK E + + +D V+ LS YGCRVIQ+ +E
Sbjct: 667 IMPQALVLMTDVFGNYVIQKFFEHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEV 726
Query: 868 CH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
D+K + M+ E+ V +DQ GN+VVQ C
Sbjct: 727 VDLDQKIK--MVKELDGHVMRCVRDQNGNHVVQKCI 760
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA------LSLMTDVFGN 750
+ E+AG +V+ S ++ S +++ L EE+ ++ E++ ++M D F N
Sbjct: 845 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 904
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
YV+QK E Q + ++ H+ L YG V+ + ++V ++ ++ L
Sbjct: 905 YVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKLVAAGERRMALQSL 962
>sp|Q9ZW06|PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis thaliana GN=APUM2 PE=1 SV=1
Length = 972
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/916 (50%), Positives = 593/916 (64%), Gaps = 135/916 (14%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGLF 75
DY +++G L+ EQ+++Q A +LE+ELN++RSGSAPPTV+GS+S+ GLF
Sbjct: 22 DYEKEIGVLLGEQQRRQ----------VEADELERELNLYRSGSAPPTVDGSVSAAGGLF 71
Query: 76 KKLSDNKGGFL-------------NEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWR 122
FL ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 72 SGGGGAP--FLEFGGGNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLR 129
Query: 123 FTQRLRGGGEV-GGIGDRRKGNG--SLFAVQPGFGGKEE---ENSGGSGGGGEWGGDGLI 176
QRL+G V GG+GDRRK N SLF++ PGF +++ E S EW +GLI
Sbjct: 130 VAQRLKGSSNVLGGVGDRRKVNDSQSLFSMPPGFDQRKQHEFEVEKTSASSSEWDANGLI 189
Query: 177 GLPGLGLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLS 236
GLPGLG+G +QKS A+I Q DM HG PV++ PSRP SRN F++ ++S
Sbjct: 190 GLPGLGIGGKQKSFADIFQADMGHGHPVTKQPSRPASRNTFDENVDSK------------ 237
Query: 237 SIDGLGSSANKQGMPSAQSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAGV 296
+ L SA +Q IG + +SYA+ LG+SLSR+ TPDPQ +AR PSP + G
Sbjct: 238 --NNLSPSA-------SQGIGAPSPYSYAAVLGSSLSRNGTPDPQAIARVPSPCLTPIGS 288
Query: 297 GRASSMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNSRSQNQHEID 356
GR SS DKR S P NG L +S+++V ALSG+NLS G D+ R Q + +++
Sbjct: 289 GRVSSNDKRNTSNQSPFNG---GLNESSDLVNALSGMNLSGSGGLDE----RGQAEQDVE 341
Query: 357 D-RHSLFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNASL 415
R+ +F LQG + QH F +S+
Sbjct: 342 KVRNYMFGLQGGHNEVNQHGFPNKSDQ--------------------------------- 368
Query: 416 MADGHKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSPS 475
K+ NS L+G T N GG + +Q + + N+ LN Y +NP+ S
Sbjct: 369 ---AQKATGLLRNSQLRGAQGSTYNDGGGVATQYQHLDS-----PNYCLNNYGLNPAVAS 420
Query: 476 MMGSPIGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLGN 533
MM + +G+ N P+YENA+AASAM +G+D+R + G N+ +E +++ R N
Sbjct: 421 MMANQLGTNNYSPVYENASAASAMGFSGMDSRLHGGGYVSSGQNL----SESRNLGRFSN 476
Query: 534 HT--AGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDI---GNSYMDLLGLQKAYL 588
G+ LQ+ + DP+Y QY A + LNDP+MD+ GNSYM++L LQ+AYL
Sbjct: 477 RMMGGGTGLQSHMADPMYHQY-------ADSLDLLNDPSMDVNFMGNSYMNMLELQRAYL 529
Query: 589 GALLSPQKSQYGVPYLNKSGSLNNNL-YGNPAFGLGMSYPGGP----LLPNSPVGSGSPV 643
GA QKSQYGVPY KSGS N++ YG+P FG SYPG P LLPNS V SP+
Sbjct: 530 GA----QKSQYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLLPNSLVSPCSPM 580
Query: 644 RHGDRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGH 703
R G+ NMR+PS RN +GGVMG WH +A SLDE F SS+L+EFKSNKT+ FEL+EIAGH
Sbjct: 581 RRGEVNMRYPSATRNYAGGVMGSWHMDA--SLDEGFGSSMLEEFKSNKTRGFELAEIAGH 638
Query: 704 VVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTAS 763
VVEFS+DQYGSRFIQQKLETAT++EKNMV++EIMP AL+LMTDVFGNYVIQKFFEHG
Sbjct: 639 VVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPP 698
Query: 764 QVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNH 823
Q RELAD+L +VL LSLQMYGCRVIQKAIEVV+LDQ+ +MVKELDGH+MRCVRDQNGNH
Sbjct: 699 QRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNH 758
Query: 824 VIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQ 883
V+QKCIECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCHD TQS +MDEI+
Sbjct: 759 VVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMS 818
Query: 884 SVCMLAQDQYGNYVVQ 899
++ MLAQDQYGNYV+Q
Sbjct: 819 TISMLAQDQYGNYVIQ 834
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 107/208 (51%), Gaps = 8/208 (3%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFE 758
++ +V+ S YG R IQ+ +E ++K + +E+ + + D GN+V+QK E
Sbjct: 706 KLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIE 765
Query: 759 HGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVV-ELDQQTQMVKELDGHIMRCVR 817
+ + G+V+TLS YGCRVIQ+ +E + D Q++++ E+ I +
Sbjct: 766 CVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQ 825
Query: 818 DQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIM 877
DQ GN+VIQ +E D I+ ++V +S + V+++ L E+ + +
Sbjct: 826 DQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERE-FL 884
Query: 878 MDEIL------QSVCMLAQDQYGNYVVQ 899
++E+L + + + +DQ+ NYVVQ
Sbjct: 885 VNEMLGTTDENEPLQAMMKDQFANYVVQ 912
Score = 84.3 bits (207), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 748 FGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE 807
FG+ ++++F + T ELA ++ GHV+ S YG R IQ+ +E D++ + +E
Sbjct: 614 FGSSMLEEFKSNKTRG--FELA-EIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEE 670
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ H + + D GN+VIQK E + + +D V+ LS YGCRVIQ+ +E
Sbjct: 671 IMPHALALMTDVFGNYVIQKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEV 730
Query: 868 CH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
D+K + M+ E+ V +DQ GN+VVQ C
Sbjct: 731 VDLDQKIK--MVKELDGHVMRCVRDQNGNHVVQKCI 764
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 7/177 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETA-TTEEKNMVFQEIMPQALSLMTDVFGNYVI 753
F +S G+VV S YG R IQ+ LE + ++ V EIM L D +GNYVI
Sbjct: 774 FIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVI 833
Query: 754 QKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH-- 811
Q EHG + + +L G ++ +S Q + V++K + +++ +V E+ G
Sbjct: 834 QHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTD 893
Query: 812 ----IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
+ ++DQ N+V+QK +E + + I+ + L + YG ++ RV
Sbjct: 894 ENEPLQAMMKDQFANYVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARV 950
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA------LSLMTDVFGN 750
+ E+AG +V+ S ++ S +++ L EE+ + E++ ++M D F N
Sbjct: 849 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFAN 908
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
YV+QK E Q + ++ H+ L YG ++ + ++V ++ ++ L
Sbjct: 909 YVVQKVLETCDDQQRELILGRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSL 966
>sp|Q9ZW02|PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis thaliana GN=APUM3 PE=1 SV=1
Length = 964
Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/910 (49%), Positives = 582/910 (63%), Gaps = 132/910 (14%)
Query: 16 DYVEDLGKLIREQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGL- 74
DY +++G L+ EQ+++Q A +LE+ELN++RSGSAPPTV+GSLS+ GL
Sbjct: 23 DYEKEIGVLLGEQQRRQ----------VEADELERELNLYRSGSAPPTVDGSLSAAGGLF 72
Query: 75 ----------FKKLSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFT 124
F ++ G ++EE R DPAY++YYY+N+ LNPRLPPPL+S+ED R
Sbjct: 73 SGGGGASFLEFGGVNKGNGFGGDDEEFRKDPAYLSYYYANMKLNPRLPPPLMSREDLRVA 132
Query: 125 QRLRGGGEV-GGIGDRRKGNGS--LFAVQPGFGGKEEENSGGSGGGGEWGGDGLIGLPGL 181
QRL+G V GG+GDRRK N S LF++ PGF E G S EW +GLIGL
Sbjct: 133 QRLKGSNNVLGGVGDRRKVNDSRSLFSMPPGF---EAGKPGASAS--EWDANGLIGL--- 184
Query: 182 GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAHLHHDLSSIDGL 241
GLG +QKS A+I Q DM H PV + PSRP SRN F++ ++S+ + L
Sbjct: 185 GLGGKQKSFADIFQADMGH--PVVQQPSRPASRNTFDENVDSN--------------NNL 228
Query: 242 GSSANKQGMPSAQSIGTSASHSYASALGASLSRSTTPDPQLMARAPSPRIPTAGVGRASS 301
SA +Q IG + + YA+ LG+SLSR+ TPDPQ +AR PSP + G GR SS
Sbjct: 229 SPSA-------SQGIGAPSPYCYAAVLGSSLSRNGTPDPQGIARVPSPCLTPIGSGRVSS 281
Query: 302 MDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENNSRSQNQHEIDD-RHS 360
DKR S P NGV+ L +S+++V ALSGLNLS G D+ R Q + +++ R+
Sbjct: 282 NDKRNTSNQSPFNGVTSGLNESSDLVNALSGLNLSGTGGLDE----RGQAEQDVEKVRNY 337
Query: 361 LFNLQGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKSGVGIDMNNASLMADGH 420
+F LQ + H F RS+ + +GS + SG G+
Sbjct: 338 MFGLQDGHNEVNPHGFPNRSDQARGTASCRNSQMRGSQGSAYNSGSGV------------ 385
Query: 421 KSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSLNGYSMNPSSPSMMGSP 480
+N Y HH S N Y++NP+ SMM +
Sbjct: 386 ------ANPY----------------QHHD------------SPNYYALNPAVASMMANQ 411
Query: 481 IGSGNLPPLYENAAAASAMAGNGLDARTLAS--LGLGPNVMAAAAELQSMNRLGNHT--A 536
+G+ N P+YENA+A + + +D+R + G N+ +E +++ R+GN
Sbjct: 412 LGTNNYSPMYENASAT--LGYSAMDSRLHGGSFVSSGQNL----SESRNIGRVGNRMMEG 465
Query: 537 GSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMD--IGNSYMDLLGLQKAYLGALLSP 594
G+ + L DP+Y QY R +E A + LNDP+MD GNSYM++L +Q+AYLG+
Sbjct: 466 GTGHPSHLADPMYHQYARFSENADS-FDLLNDPSMDRNYGNSYMNMLEIQRAYLGS---- 520
Query: 595 QKSQYGVPYLNKSGSLNNN-LYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHGDRN 649
QKSQYG+PY KSGS N++ YG+P FG MSYPG PL +PNS + SP+R G+ N
Sbjct: 521 QKSQYGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGMPNSLMSPYSPMRRGEVN 578
Query: 650 MRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSA 709
MR+P+ RN +GGVMG WH +A SLDE F SS+L+EFKSNKT+ FELSEIAGHVVEFS+
Sbjct: 579 MRYPAATRNYTGGVMGSWHMDA--SLDEGFGSSMLEEFKSNKTRGFELSEIAGHVVEFSS 636
Query: 710 DQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELA 769
DQYGSRFIQQKLETATT+EKNMV++EIMP+AL+LMTDVFGNYVIQKFFEHG Q REL
Sbjct: 637 DQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQRRELG 696
Query: 770 DQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCI 829
++L +VL LSLQMYGCRVIQKAIEVV+LDQ+ QMVKELDGH+MRCVRDQNGNHV+QKCI
Sbjct: 697 EKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQKCI 756
Query: 830 ECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLA 889
ECVPE+ I+FI+ TF+ VVTLSTHPYGCRVIQRVLEHCH+ TQS +M+EIL +V ML
Sbjct: 757 ECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLT 816
Query: 890 QDQYGNYVVQ 899
QDQYGNYVVQ
Sbjct: 817 QDQYGNYVVQ 826
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 110/212 (51%), Gaps = 9/212 (4%)
Query: 696 ELSE-IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
EL E + +V+ S YG R IQ+ +E ++K + +E+ + + D GN+V+Q
Sbjct: 694 ELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVVQ 753
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVE-LDQQTQMVKELDGHIM 813
K E + + GHV+TLS YGCRVIQ+ +E D Q+++++E+ +
Sbjct: 754 KCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVS 813
Query: 814 RCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKT 873
+DQ GN+V+Q +E D I+ ++V +S + V+++ L E+
Sbjct: 814 MLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEER 873
Query: 874 QSIMMDEIL------QSVCMLAQDQYGNYVVQ 899
+ ++++E+L + + + +DQ+ NYVVQ
Sbjct: 874 E-LLVNEMLGTTDENEPLQAMMKDQFANYVVQ 904
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETA-TTEEKNMVFQEIMPQALSLMTDVFGNYVI 753
F +S GHVV S YG R IQ+ LE + ++ V +EI+ L D +GNYV+
Sbjct: 766 FIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTVSMLTQDQYGNYVV 825
Query: 754 QKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH-- 811
Q EHG + + +L G ++ +S Q + V++K + +++ +V E+ G
Sbjct: 826 QHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTD 885
Query: 812 ----IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
+ ++DQ N+V+QK +E + + I+ + L + YG ++ RV
Sbjct: 886 ENEPLQAMMKDQFANYVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARV 942
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA------LSLMTDVFGN 750
+ E+AG +V+ S ++ S +++ L EE+ ++ E++ ++M D F N
Sbjct: 841 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 900
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
YV+QK E Q + ++ H+ L YG ++ + ++V ++ ++ L
Sbjct: 901 YVVQKVLETCDDQQRELILTRIKVHLNALKKYTYGKHIVARVEKLVAAGERRMALQSL 958
Score = 40.4 bits (93), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 847 QVVTLSTHPYGCRVIQRVLEHCH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
VV S+ YG R IQ+ LE DEK +++ +EI+ L D +GNYV+Q F
Sbjct: 630 HVVEFSSDQYGSRFIQQKLETATTDEK--NMVYEEIMPKALALMTDVFGNYVIQKFF 684
>sp|Q9SS47|PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis thaliana GN=APUM4 PE=1 SV=2
Length = 1003
Score = 516 bits (1328), Expect = e-145, Method: Compositional matrix adjust.
Identities = 353/920 (38%), Positives = 502/920 (54%), Gaps = 128/920 (13%)
Query: 26 REQKQQQHLQEATQVNSASAADLEKELNIFRSGSAPPTVEGSLSSIDGLFKK-------- 77
R Q++ + L + + + + E+++++ RSGSAPPTVEG L ++D +
Sbjct: 27 RFQRELESLLQQHRNQQSFGRERERDIDVHRSGSAPPTVEGLLRAMDNQYLNNNNSDHRD 86
Query: 78 -------LSDNKGGFLNEEELRADPAYVNYYYSNVNLNPRLPPPLLSKEDWRFTQRLRGG 130
+ N L+++ELR P Y++YYYSN + NPRLPPPLLS+EDWR QR
Sbjct: 87 VGNISSITTSNGVELLSDDELRWHPEYLSYYYSNEHSNPRLPPPLLSREDWRVAQRFHNS 146
Query: 131 GEVGG-IGDRRK------GNGSLFAVQPGFGGKEEEN------SGGSGGGGE------WG 171
V +G+ RK + SLF+VQPG ++ EN + + G + G
Sbjct: 147 ESVFDPVGEWRKKTVEVDNSSSLFSVQPGVPVEQAENDLMELRNAVAQGRSQKVQRLDQG 206
Query: 172 GDGLIGLPGL-GLGSRQKSIAEIIQDDMSHGAPVSRHPSRPPSRNAFEDAIESSETQFAH 230
+ LIGL G GLG R+KS A+I+Q+ + A + SRP S N F D
Sbjct: 207 REDLIGLSGYSGLGPRRKSFADILQEGLERDAALGSQLSRPASCNTFRDM---------- 256
Query: 231 LHHDLSSIDGLGSSANKQGMPSAQSIGTSASHSYASALGASLS----RSTTPDPQLMARA 286
D + + + + S+ ++A +S + LG+++S R+ TPD L+ R+
Sbjct: 257 --KDAAVLSNFSAGGFDSPLAFHDSLHSTAKNSPNTMLGSTMSSPVPRNRTPDSHLVGRS 314
Query: 287 PSPRIPTAGVGRASSMDKRTVSGPLPLNGVSPSLKDSAEIVAALSGLNLSTDGVADQENN 346
+ +P G R ++K+ G N S + +A++ LS LN+S +EN+
Sbjct: 315 TASGLPPIGT-RVGPVEKKNTFGTAIQNCESYT---AADVADTLSRLNMSEMSQV-KENH 369
Query: 347 SRSQNQHEIDDRHSLFNL--QGDSRHMKQHPFLGRSESGHLLMHSASHSTKGSYPNMGKS 404
+SQ Q E++++ + G + ++Q +E+ L + G ++G S
Sbjct: 370 MQSQLQVELENQSDVMRYIPNGHKKALRQQ---NTAETKDHLFSANYGGMSGYGASLGAS 426
Query: 405 GVGIDMNNASLMADGHKSALSSSNSYLKGPCTPTLNGGGNSPSHHQVMGNMNSAFSNFSL 464
VG S+ + P + + S S H +G++ S+ ++
Sbjct: 427 TVG-------------------SHGQVNIPKRTSSSASLYSTSDHSRLGSV--GLSDVNI 465
Query: 465 NGYSMNPSSPSMMGSPIGSGNLPPLYEN-AAAASAMAGNGLDARTLASLGLGPNVMAAAA 523
++N + S G + L L E+ +A S + G+G
Sbjct: 466 RNGNINGTDFSTAGGYMAKNKLNSLAEHYSAEGSHLTGDG-------------------- 505
Query: 524 ELQSMNRLGNHTAGSALQAPLMDPLYLQYLRSNEYAAAQVASLNDPAMDIGNSYMDLLG- 582
+ QS+NRL N A S L +P+MDP Y QYL + AA + D ++ I N++ G
Sbjct: 506 DRQSLNRLINQVA-SELHSPVMDPHYSQYLHTASSTAAPI----DHSL-IRNNFGTSNGD 559
Query: 583 LQKAYLGALLSPQKSQYGVPYLNKSGSLNNNLYGNPAFGLGMSYPGGPLLPNSPVGSGSP 642
YL LL+ + Q G LN + N+ + +P++ LG Y G L S S
Sbjct: 560 TANEYLAMLLAQNRQQLG--NLNAA---NSRFFESPSYDLGNMYLGNHL------PSPSK 608
Query: 643 VRHGDRNMRF---PSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSE 699
+NMR S M+ GG+ G H + G + + +SLL+ FK+NKT+ ELSE
Sbjct: 609 NSRNFQNMRMSQSASMMKVPFGGLQGSSHVDIGSTAE----ASLLEGFKNNKTRSLELSE 664
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I GHV+EFS DQYGSRFIQQKLETAT EEKN +F EI+P +LMTDVFGNYVIQKFFEH
Sbjct: 665 IVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEH 724
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQ 819
GT Q +ELA+Q+TGHVL LSLQMYGCRVIQKA+EVVEL+QQ +MVKELDG +M+CV DQ
Sbjct: 725 GTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHDQ 784
Query: 820 NGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMD 879
NGNHVIQKCIE +P+D IQFI+ +FY +V+ LSTHPYGCRVIQRVLEH D +TQ I+M+
Sbjct: 785 NGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIME 844
Query: 880 EILQSVCMLAQDQYGNYVVQ 899
EI+ SVC LAQDQYGNYV+Q
Sbjct: 845 EIMDSVCTLAQDQYGNYVIQ 864
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 12/216 (5%)
Query: 656 MRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSR 715
++ L G VM H + G + + L ++ F +S G V+ S YG R
Sbjct: 770 VKELDGSVMKCVHDQNGNHVIQKCIERLPQDWIQ-----FIISSFYGKVLALSTHPYGCR 824
Query: 716 FIQQKLE-TATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
IQ+ LE E + ++ +EIM +L D +GNYVIQ +HG + E+ ++L G
Sbjct: 825 VIQRVLEHIDDIETQRIIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAG 884
Query: 775 HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH------IMRCVRDQNGNHVIQKC 828
++ +S Q + V++K + +++ +V E+ G+ + ++D GN+V+QK
Sbjct: 885 QIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKV 944
Query: 829 IECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
+E + ++ I+ + L + YG ++ RV
Sbjct: 945 LETCDDQSLALILSRIKVHLNALKRYTYGKHIVARV 980
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 771 QLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIE 830
++ GHV+ S+ YG R IQ+ +E +++ + E+ + + D GN+VIQK E
Sbjct: 664 EIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFE 723
Query: 831 CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQ 890
+ + V+ LS YGCRVIQ+ LE E+ Q+ M+ E+ SV
Sbjct: 724 HGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQ-QARMVKELDGSVMKCVH 782
Query: 891 DQYGNYVVQVCF 902
DQ GN+V+Q C
Sbjct: 783 DQNGNHVIQKCI 794
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA------LSLMTDVFGN 750
++++AG +V+ S ++ S +++ L EE+ ++ E++ ++M D FGN
Sbjct: 879 INKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGN 938
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVV 796
YV+QK E + + ++ H+ L YG ++ + +++
Sbjct: 939 YVVQKVLETCDDQSLALILSRIKVHLNALKRYTYGKHIVARVEKLI 984
>sp|Q9LJX4|PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis thaliana GN=APUM5 PE=1 SV=2
Length = 961
Score = 332 bits (852), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 182/368 (49%), Positives = 230/368 (62%), Gaps = 21/368 (5%)
Query: 544 LMDPLYLQYLRSNEYAAAQVASLNDPAMDIGNSYMDLLGLQKAYLG---ALLSPQKSQYG 600
L+DP LQY + AQV + P +S+ Y+ L SP YG
Sbjct: 470 LVDPFQLQY-----FQQAQVDAYAPPFQSSTDSFGQKDQQAVGYMANHEPLNSPLSPGYG 524
Query: 601 VPYLNKSGSLNNNLYGNPAFGLGMSYPGGPL----LPNSPVGSGSPVRHGDRN-MRF-PS 654
L + N P + YPG PL +P+SPVG G G R+ R+
Sbjct: 525 ---LQSPRHMGNYFAVPPGVRVMPQYPGSPLASPVMPSSPVG-GMMSHFGRRSETRYHQQ 580
Query: 655 GMRNLSGGVMGPWHSEAGGS---LDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQ 711
G +G G W GG+ +D+ S LDE KS + ELS+IAG VVEFS DQ
Sbjct: 581 GPSRNTGIYPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVEFSVDQ 640
Query: 712 YGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQ 771
+GSRFIQQKLE + EEK VF E++PQA LMTDVFGNYVIQKF EHGT +Q EL Q
Sbjct: 641 HGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVKQ 700
Query: 772 LTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC 831
L G +++LSLQMYGCRVIQKA+EV+++DQ+T++++ELDG++++CVRDQNGNHVIQKCIE
Sbjct: 701 LAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQKCIES 760
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQD 891
+P I F++ F QV TLSTHPYGCRVIQR+LEHC D++ ++DEIL+S LA D
Sbjct: 761 MPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHD 820
Query: 892 QYGNYVVQ 899
QYGNYV Q
Sbjct: 821 QYGNYVTQ 828
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 11/240 (4%)
Query: 670 EAGGSLDESFASSLLDEFKSNKTKCFE---LSEIAGHVVEFSADQYGSRFIQQKLETATT 726
+A + + F + ++ +F + T + ++AG +V S YG R IQ+ LE
Sbjct: 668 QASKLMTDVFGNYVIQKFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDV 727
Query: 727 EEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGC 786
++K + +E+ L + D GN+VIQK E A ++ + G V TLS YGC
Sbjct: 728 DQKTELIRELDGNVLKCVRDQNGNHVIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGC 787
Query: 787 RVIQKAIEVVELDQQTQ-MVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFY 845
RVIQ+ +E D++T ++ E+ DQ GN+V Q +E D + I+
Sbjct: 788 RVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLT 847
Query: 846 DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL------QSVCMLAQDQYGNYVVQ 899
VV +S H Y V+++ LEH D + +++EI+ + + +DQ+ NYVVQ
Sbjct: 848 GNVVQMSQHKYASNVVEKCLEHA-DSTEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQ 906
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 92/176 (52%), Gaps = 7/176 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATT-EEKNMVFQEIMPQALSLMTDVFGNYVI 753
F ++ G V S YG R IQ+ LE + EE + + EI+ A +L D +GNYV
Sbjct: 768 FVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAFALAHDQYGNYVT 827
Query: 754 QKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----- 808
Q E G + R++ ++LTG+V+ +S Y V++K +E + ++ +++E+
Sbjct: 828 QHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTEREFLIEEIMGKSE 887
Query: 809 -DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQR 863
D H++ ++DQ N+V+QK +E + + +V + +L + YG ++ R
Sbjct: 888 EDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYTYGKHIVAR 943
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 56 RSGSAPPTVEGSLSSIDGLFKK--------LSDNKGGFLNEEELRADPAYVNYYYSNVNL 107
RS SAPP++EGS +++ L K+ LS + +EEE+R+DPAYV YY SN+NL
Sbjct: 59 RSESAPPSMEGSFAALRNLLKQQEGSSSEVLSRAIENYDSEEEIRSDPAYVAYYLSNINL 118
Query: 108 NPRLPPPLLSKEDWRFTQRLRGGGEVGGIG-DRRKGNGSLFAVQPGFGGKEEENSGGSGG 166
NPRLPPPL+S+E+ + + D SL + + EE +
Sbjct: 119 NPRLPPPLISRENQHLLRHFGDNNQSPTTSWDNMGIRSSLHSSRTALSTHREEPEDEASS 178
Query: 167 GGEWGGDGLIGLPGLGLGSRQKSIAEIIQDDM 198
G + L G R+KSIA++IQ+D
Sbjct: 179 GEQQSYASLAG--------RRKSIADMIQEDF 202
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Query: 767 ELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQ 826
EL+D + G V+ S+ +G R IQ+ +E +++ + E+ + + D GN+VIQ
Sbjct: 625 ELSD-IAGRVVEFSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQ 683
Query: 827 KCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCH-DEKTQSIMMDEILQSV 885
K IE + +V Q+V+LS YGCRVIQ+ LE D+KT+ ++ E+ +V
Sbjct: 684 KFIEHGTPAQREELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTE--LIRELDGNV 741
Query: 886 CMLAQDQYGNYVVQVCF 902
+DQ GN+V+Q C
Sbjct: 742 LKCVRDQNGNHVIQKCI 758
>sp|Q9C5E7|PUM6_ARATH Pumilio homolog 6, chloroplastic OS=Arabidopsis thaliana GN=APUM6
PE=1 SV=1
Length = 861
Score = 310 bits (795), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 138/218 (63%), Positives = 174/218 (79%)
Query: 682 SLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQAL 741
+ L+E KS K + F+LS+I GH+VEFSADQ+GSRFIQQKLE EEK VF+EI+P A
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHAC 574
Query: 742 SLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQ 801
LMTDVFGNYVIQKFFE+G ++Q +ELADQL G ++ LSLQMYGCRVIQKA++V+E DQ+
Sbjct: 575 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 634
Query: 802 TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVI 861
++ +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 635 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 862 QRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
QR+LE C + + +EIL+SVC+L++DQYGNYV Q
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQ 732
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 657 RNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRF 716
R L G VM + G + + ++ ++K F L G V S YG R
Sbjct: 639 RELDGQVMRCVRDQNGNHVIQK----CIENIPADKVG-FMLYAFRGQVSSLSMHPYGCRV 693
Query: 717 IQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGH 775
IQ+ LE + + + + +EI+ L D +GNYV Q E GT+ + + +L+GH
Sbjct: 694 IQRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGH 753
Query: 776 VLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDG------HIMRCVRDQNGNHVIQKCI 829
++ LSL + VI+K +E ++ ++KE+ G ++ ++DQ GN+V+QK
Sbjct: 754 IVQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIF 813
Query: 830 ECVPEDAIQFIVLTFYDQV----VTLSTHPYGCRVIQRVLEHCHDEKTQSI 876
E D LT + +V L + YG ++ R LE E+ Q +
Sbjct: 814 ETCTADQ----RLTLFSRVRMHASALKKYTYGKHIVSR-LEQPSIEENQEL 859
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 848 VVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
+V S +G R IQ+ LE+C E+ ++ EIL C L D +GNYV+Q F
Sbjct: 537 IVEFSADQHGSRFIQQKLENCKPEEKAAVFR-EILPHACKLMTDVFGNYVIQKFF 590
>sp|P25822|PUM_DROME Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2
Length = 1533
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 136/219 (62%), Positives = 168/219 (76%), Gaps = 1/219 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++ + +L ++A H+VEFS DQ+GSRFIQQKLE AT EK MVF EI+ A
Sbjct: 1093 SRLLEDFRNQRYPNLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAA 1152
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
SLMTDVFGNYVIQKFFE GT Q L Q+ GHVL L+LQMYGCRVIQKA+E + +Q
Sbjct: 1153 YSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQ 1212
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q ++V ELDGH+++CV+DQNGNHV+QKCIECV A+QFI+ F QV +LSTHPYGCRV
Sbjct: 1213 QQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRV 1272
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
IQR+LEHC E+T I +DE+ + L QDQYGNYV+Q
Sbjct: 1273 IQRILEHCTAEQTTPI-LDELHEHTEQLIQDQYGNYVIQ 1310
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 5/188 (2%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F ++ G V S YG R IQ+ LE T E+ + E+ L+ D +GNYVIQ
Sbjct: 1251 FIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQ 1310
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG L + + G VL LS + V++K + ++T ++ E+ D
Sbjct: 1311 HVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDN 1370
Query: 811 HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHD 870
+ ++DQ N+V+QK I+ ++ ++ + L + YG + I LE +
Sbjct: 1371 ALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYG-KHINAKLEKYYM 1429
Query: 871 EKTQSIMM 878
+ T I +
Sbjct: 1430 KITNPITV 1437
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMP---QALS 742
E + K ++ + G V+ S ++ S +++ + AT E+ + E+ AL
Sbjct: 1314 EHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALH 1373
Query: 743 -LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQK 791
+M D + NYV+QK + +Q+++L ++ H+ L YG + K
Sbjct: 1374 VMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAK 1423
Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 846 DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
+ +V S +G R IQ+ LE + Q ++ EIL + L D +GNYV+Q F
Sbjct: 1114 NHIVEFSQDQHGSRFIQQKLERATAAEKQ-MVFSEILAAAYSLMTDVFGNYVIQKFF 1169
>sp|Q14671|PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens GN=PUM1 PE=1 SV=3
Length = 1186
Score = 295 bits (754), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 170/219 (77%), Gaps = 1/219 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
IQR+LEHC ++T I ++E+ Q L QDQYGNYV+Q
Sbjct: 1010 IQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQ 1047
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 116/222 (52%), Gaps = 10/222 (4%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMT 745
EF S + K I GHV+ + YG R IQ+ LE ++++N + +E+ L +
Sbjct: 907 EFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK 966
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D GN+V+QK E ++ + D G V LS YGCRVIQ+ +E DQ ++
Sbjct: 967 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1026
Query: 806 KELDGHIMRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
+EL H + V+DQ GN+VIQ +E PED + IV V+ LS H + V+++
Sbjct: 1027 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSK-IVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 865 LEHCHDEKTQSIMMDEIL-------QSVCMLAQDQYGNYVVQ 899
+ H +++++DE+ ++ + +DQY NYVVQ
Sbjct: 1086 VTHA-SRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1126
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE ++ + +E+ L+ D +GNYVIQ
Sbjct: 988 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQ 1047
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1048 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDG 1107
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1108 PHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1167
Score = 37.7 bits (86), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 848 VVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
++ S +G R IQ LE + Q ++ +EILQ+ L D +GNYV+Q F
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQ-LVFNEILQAAYQLMVDVFGNYVIQKFF 906
>sp|Q5R5X3|PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1
Length = 1186
Score = 295 bits (754), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 133/219 (60%), Positives = 170/219 (77%), Gaps = 1/219 (0%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 830 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 889
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 890 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 949
Query: 801 QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGCRV
Sbjct: 950 QNEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRV 1009
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
IQR+LEHC ++T I ++E+ Q L QDQYGNYV+Q
Sbjct: 1010 IQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQ 1047
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 116/222 (52%), Gaps = 10/222 (4%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMT 745
EF S + K I GHV+ + YG R IQ+ LE ++++N + +E+ L +
Sbjct: 907 EFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK 966
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D GN+V+QK E ++ + D G V LS YGCRVIQ+ +E DQ ++
Sbjct: 967 DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL 1026
Query: 806 KELDGHIMRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
+EL H + V+DQ GN+VIQ +E PED + IV V+ LS H + V+++
Sbjct: 1027 EELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSK-IVAEIRGNVLVLSQHKFASNVVEKC 1085
Query: 865 LEHCHDEKTQSIMMDEIL-------QSVCMLAQDQYGNYVVQ 899
+ H +++++DE+ ++ + +DQY NYVVQ
Sbjct: 1086 VTHA-SRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1126
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE ++ + +E+ L+ D +GNYVIQ
Sbjct: 988 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQ 1047
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1048 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDG 1107
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1108 PHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1167
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 848 VVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
++ S +G R IQ LE + Q ++ +EILQ+ L D +GNYV+Q F
Sbjct: 853 IMEFSQDQHGSRFIQLKLERATPAERQ-LVFNEILQAAYQLMVDVFGNYVIQKFF 906
>sp|Q8TB72|PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2
Length = 1066
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/221 (61%), Positives = 170/221 (76%), Gaps = 3/221 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L ++ GH+VEFS DQ+GSRFIQQKLE AT E+ MVF EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAA 767
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LMTDVFGNYVIQKFFE G+ Q LA ++ GHVL L+LQMYGCRVIQKA+E + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 801 Q--TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q ++MVKELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+Q
Sbjct: 888 RVIQRILEHCTAEQTLPI-LEELHQHTEQLVQDQYGNYVIQ 927
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 119/224 (53%), Gaps = 12/224 (5%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNM--VFQEIMPQALSL 743
EF S K + I GHV+ + YG R IQ+ LE+ +++++ + + +E+ L
Sbjct: 785 EFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKC 844
Query: 744 MTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
+ D GN+V+QK E ++ + D G V LS YGCRVIQ+ +E +Q
Sbjct: 845 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP 904
Query: 804 MVKELDGHIMRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQ 862
+++EL H + V+DQ GN+VIQ +E PED + IV +V+ LS H + V++
Sbjct: 905 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSK-IVSEIRGKVLALSQHKFASNVVE 963
Query: 863 RVLEHCHDEKTQSIMMDEIL-------QSVCMLAQDQYGNYVVQ 899
+ + H +++++DE+ ++ + +DQY NYVVQ
Sbjct: 964 KCVTHA-SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1006
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE T E+ + +E+ L+ D +GNYVIQ
Sbjct: 868 FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQ 927
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G VL LS + V++K + ++ ++ E+ DG
Sbjct: 928 HVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDG 987
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + I+ + TL + YG ++ ++ ++
Sbjct: 988 PHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKY 1047
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
+IMP S + + F N Q+R+L GH++ S +G R IQ+ +E
Sbjct: 701 DIMPSGRSRLLEDFRNNRFPNL-------QLRDL----IGHIVEFSQDQHGSRFIQQKLE 749
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E D + V+ L+
Sbjct: 750 RATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQ 809
Query: 855 PYGCRVIQRVLEHCH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
YGCRVIQ+ LE D++ S M+ E+ V +DQ GN+VVQ C
Sbjct: 810 MYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCI 858
>sp|Q80U58|PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2
Length = 1066
Score = 293 bits (750), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 170/221 (76%), Gaps = 3/221 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L ++ GH+VEFS DQ+GSRFIQQKLE AT E+ +VF EI+ A
Sbjct: 708 SRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAA 767
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LMTDVFGNYVIQKFFE G+ Q LA ++ GHVL L+LQMYGCRVIQKA+E + DQ
Sbjct: 768 YQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQ 827
Query: 801 Q--TQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q ++MVKELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 828 QVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGC 887
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+Q
Sbjct: 888 RVIQRILEHCTAEQTLPI-LEELHQHTEQLVQDQYGNYVIQ 927
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 119/224 (53%), Gaps = 12/224 (5%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNM--VFQEIMPQALSL 743
EF S K + I GHV+ + YG R IQ+ LE+ +++++ + + +E+ L
Sbjct: 785 EFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKC 844
Query: 744 MTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
+ D GN+V+QK E ++ + D G V LS YGCRVIQ+ +E +Q
Sbjct: 845 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP 904
Query: 804 MVKELDGHIMRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQ 862
+++EL H + V+DQ GN+VIQ +E PED + IV +V+ LS H + V++
Sbjct: 905 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSK-IVSEIRGKVLALSQHKFASNVVE 963
Query: 863 RVLEHCHDEKTQSIMMDEIL-------QSVCMLAQDQYGNYVVQ 899
+ + H +++++DE+ ++ + +DQY NYVVQ
Sbjct: 964 KCVTHA-SRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1006
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE T E+ + +E+ L+ D +GNYVIQ
Sbjct: 868 FIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQ 927
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G VL LS + V++K + ++ ++ E+ DG
Sbjct: 928 HVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDG 987
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + I+ + TL + YG ++ ++ ++
Sbjct: 988 PHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEKY 1047
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 78/169 (46%), Gaps = 12/169 (7%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
+IMP S + + F N Q+R+L GH++ S +G R IQ+ +E
Sbjct: 701 DIMPSGRSRLLEDFRNNRFPNL-------QLRDL----IGHIVEFSQDQHGSRFIQQKLE 749
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E D + V+ L+
Sbjct: 750 RATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQ 809
Query: 855 PYGCRVIQRVLEHCH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
YGCRVIQ+ LE D++ S M+ E+ V +DQ GN+VVQ C
Sbjct: 810 MYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCI 858
>sp|Q2VB19|PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus GN=PUM1 PE=2 SV=1
Length = 1189
Score = 291 bits (746), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 170/221 (76%), Gaps = 3/221 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAA 890
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQ 950
Query: 801 QT--QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
RVIQR+LEHC E+T I ++E+ Q L QDQYGNYV+Q
Sbjct: 1011 RVIQRILEHCLPEQTLPI-LEELHQHTEQLVQDQYGNYVIQ 1050
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 12/224 (5%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK--NMVFQEIMPQALSL 743
EF S + K I GHV+ + YG R IQ+ LE +++ N + +E+ L
Sbjct: 908 EFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKC 967
Query: 744 MTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
+ D GN+V+QK E ++ + D G V LS YGCRVIQ+ +E +Q
Sbjct: 968 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 1027
Query: 804 MVKELDGHIMRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQ 862
+++EL H + V+DQ GN+VIQ +E PED + IV V+ LS H + V++
Sbjct: 1028 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSK-IVAEIRGNVLVLSQHKFASNVVE 1086
Query: 863 RVLEHCHDEKTQSIMMDEIL-------QSVCMLAQDQYGNYVVQ 899
+ + H +++++DE+ ++ + +DQY NYVVQ
Sbjct: 1087 KCVTHA-SRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1129
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE E+ + +E+ L+ D +GNYVIQ
Sbjct: 991 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQ 1050
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1051 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTMNDG 1110
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1111 PHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1170
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
++MP S + + F N Q+RE+A GH++ S +G R IQ +E
Sbjct: 824 DVMPSGRSRLLEDFRNNRYPNL-------QLREIA----GHIMEFSQDQHGSRFIQLKLE 872
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E + + V++L+
Sbjct: 873 RATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQ 932
Query: 855 PYGCRVIQRVLEHCH-DEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
YGCRVIQ+ LE D++ + M+ E+ V +DQ GN+VVQ C
Sbjct: 933 MYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 981
>sp|Q80U78|PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2
Length = 1189
Score = 290 bits (742), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 133/221 (60%), Positives = 170/221 (76%), Gaps = 3/221 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQA 740
S LL++F++N+ +L EIAGH++EFS DQ+GSRFIQ KLE AT E+ +VF EI+ A
Sbjct: 831 SRLLEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAA 890
Query: 741 LSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ 800
LM DVFGNYVIQKFFE G+ Q LA+++ GHVL+L+LQMYGCRVIQKA+E + DQ
Sbjct: 891 YQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQ 950
Query: 801 QT--QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q +MV+ELDGH+++CV+DQNGNHV+QKCIECV ++QFI+ F QV LSTHPYGC
Sbjct: 951 QVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGC 1010
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
RVIQR+LEHC ++T I ++E+ Q L QDQYGNYV+Q
Sbjct: 1011 RVIQRILEHCLPDQTLPI-LEELHQHTEQLVQDQYGNYVIQ 1050
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK--NMVFQEIMPQALSL 743
EF S++ K I GHV+ + YG R IQ+ LE ++++ N + +E+ L
Sbjct: 908 EFGSHEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKC 967
Query: 744 MTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
+ D GN+V+QK E ++ + D G V LS YGCRVIQ+ +E DQ
Sbjct: 968 VKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLP 1027
Query: 804 MVKELDGHIMRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQ 862
+++EL H + V+DQ GN+VIQ +E PED + IV V+ LS H + V++
Sbjct: 1028 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSK-IVAEIRGNVLVLSQHKFASNVVE 1086
Query: 863 RVLEHCHDEKTQSIMMDEIL-------QSVCMLAQDQYGNYVVQ 899
+ + H +++++DE+ ++ + +DQY NYVVQ
Sbjct: 1087 KCVTHA-SRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQ 1129
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 7/180 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + G V S YG R IQ+ LE ++ + +E+ L+ D +GNYVIQ
Sbjct: 991 FIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQ 1050
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL----DG 810
EHG ++ ++ G+VL LS + V++K + ++ ++ E+ DG
Sbjct: 1051 HVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDG 1110
Query: 811 ---HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ ++DQ N+V+QK I+ + ++ + TL + YG ++ ++ ++
Sbjct: 1111 PHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKLEKY 1170
Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 735 EIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE 794
++MP S + + F N Q+RE+A GH++ S +G R IQ +E
Sbjct: 824 DVMPSGRSRLLEDFRNNRYPNL-------QLREIA----GHIMEFSQDQHGSRFIQLKLE 872
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTH 854
++ + E+ + + D GN+VIQK E + + V++L+
Sbjct: 873 RATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRGHVLSLALQ 932
Query: 855 PYGCRVIQRVLEHC-HDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
YGCRVIQ+ LE D++ + M+ E+ V +DQ GN+VVQ C
Sbjct: 933 MYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCI 981
>sp|O94462|PUF3_SCHPO mRNA-binding protein puf3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=puf3 PE=2 SV=4
Length = 732
Score = 272 bits (696), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 127/220 (57%), Positives = 160/220 (72%), Gaps = 3/220 (1%)
Query: 681 SSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIM-PQ 739
S +L F +NK + FELS+I G+VV FS DQ+GSRFIQQKL TAT EE+ VFQEI
Sbjct: 378 SRVLYLFHANKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEEREAVFQEIASTS 437
Query: 740 ALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELD 799
L LM D+FGNYV+QK+FE G Q + L Q+ GHV +LSLQMYGCRV+QKAIE + +
Sbjct: 438 CLQLMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPE 497
Query: 800 QQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCR 859
Q Q+++ELDGH++ CV DQNGNHVIQK IEC+ +QFI+ Q+ LS HPYGCR
Sbjct: 498 HQVQLIQELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCR 557
Query: 860 VIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
VIQR +EHCH E+ ++++E+L + L QDQYGNYVVQ
Sbjct: 558 VIQRAIEHCHSER--KLIIEELLPHILKLTQDQYGNYVVQ 595
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 8/177 (4%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F L + + SA YG R IQ+ +E +E K ++ +E++P L L D +GNYV+Q
Sbjct: 537 FILRALRPQIHVLSAHPYGCRVIQRAIEHCHSERK-LIIEELLPHILKLTQDQYGNYVVQ 595
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVV-ELDQQTQMVKELDGHIM 813
G+ S + + D + H+L LS + V+++ I + ++D++ + K +
Sbjct: 596 HILRTGSESDKKYIFDLMIDHLLFLSCHKFASNVVERCISYISDVDRRRILNKIISEKAE 655
Query: 814 RC------VRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
C ++D+ N+VIQK ++ PE+ ++ Y + L YG +I V
Sbjct: 656 NCSILMLMMKDKYANYVIQKLLDASPEEERDLLISYIYPHISVLKKFTYGKHLIMSV 712
Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 848 VVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCM-LAQDQYGNYVVQVCF 902
VV ST +G R IQ+ L +E+ +++ EI + C+ L D +GNYVVQ F
Sbjct: 401 VVLFSTDQHGSRFIQQKLATATEEEREAVF-QEIASTSCLQLMMDIFGNYVVQKYF 455
>sp|Q07807|PUF3_YEAST mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF3 PE=1 SV=1
Length = 879
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 140/206 (67%), Gaps = 1/206 (0%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
L +I GH +EF DQ+GSRFIQ++L T+ EK ++F EI A+ L DVFGNYVIQKF
Sbjct: 536 LKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKF 595
Query: 757 FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCV 816
FE G+ Q L DQ G++ LSLQMY CRVIQKA+E ++ +Q+ ++V EL +++ +
Sbjct: 596 FEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMI 655
Query: 817 RDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSI 876
+DQNGNHVIQK IE +P + + FI+ + + LSTH YGCRVIQR+LE E +SI
Sbjct: 656 KDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESI 715
Query: 877 MMDEILQSVCMLAQDQYGNYVVQVCF 902
++E+ + L QDQYGNYV+Q
Sbjct: 716 -LNELKDFIPYLIQDQYGNYVIQYVL 740
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 113/235 (48%), Gaps = 24/235 (10%)
Query: 686 EFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMT 745
EF S K + + G++ + S Y R IQ+ LE + ++ + E+ L ++
Sbjct: 597 EFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIK 656
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D GN+VIQK E ++ + LTGH+ LS YGCRVIQ+ +E + Q ++
Sbjct: 657 DQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESIL 716
Query: 806 KELDGHIMRCVRDQNGNHVIQKCI--------ECVPEDAIQFIVLTFYDQVVTLSTHPYG 857
EL I ++DQ GN+VIQ + E V D Q I+ T + VV S H +
Sbjct: 717 NELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEMV--DIKQEIIETVANNVVEYSKHKFA 774
Query: 858 CRVIQRVLEHCHDEKTQSIMMDEIL-------------QSVCMLAQDQYGNYVVQ 899
V+++ + + + + +++ +IL + ++ +DQ+ NYV+Q
Sbjct: 775 SNVVEKSILYG-SKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQ 828
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F LS + GH+ S YG R IQ+ LE ++E++ + E+ L+ D +GNYVIQ
Sbjct: 678 FILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQ 737
Query: 755 ------KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-------------EV 795
+F +E+ + + +V+ S + V++K+I ++
Sbjct: 738 YVLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFASNVVEKSILYGSKNQKDLIISKI 797
Query: 796 VELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVL 842
+ D+ + E D ++ ++DQ N+VIQK + + + IV+
Sbjct: 798 LPRDKNHALNLEDDSPMILMIKDQFANYVIQKLVNVSEGEGKKLIVI 844
>sp|P25339|PUF4_YEAST Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PUF4 PE=1 SV=2
Length = 888
Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 17/234 (7%)
Query: 669 SEAGGSLDES--FASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATT 726
+E ++ES FA ++LD++ G + DQ+G RF+Q++L+ +
Sbjct: 544 AEKQRKIEESSRFADAVLDQY-------------IGSIHSLCKDQHGCRFLQKQLDILGS 590
Query: 727 EEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGC 786
+ + +F+E + LMTD FGNY+IQK E T Q L + H + +SL +G
Sbjct: 591 KAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGT 650
Query: 787 RVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFY 845
R +QK IE ++ D++ Q+V + L + ++ +D NGNHVIQKC++ + + QFI
Sbjct: 651 RALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAIS 710
Query: 846 DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
D + ++TH +GC V+QR L+H E+ + + D++L V L D +GNYVVQ
Sbjct: 711 DSCIDIATHRHGCCVLQRCLDHGTTEQCDN-LCDKLLALVDKLTLDPFGNYVVQ 763
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 116/244 (47%), Gaps = 22/244 (9%)
Query: 675 LDESFASSLLDEFKSNKT--KCFELSEIAG-HVVEFSADQYGSRFIQQKLETATT-EEKN 730
+ +SF + L+ + T + L++I+ H VE S + +G+R +Q+ +E T EE
Sbjct: 608 MTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQ 667
Query: 731 MVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQ 790
+V + P + L D+ GN+VIQK + + + D ++ + ++ +GC V+Q
Sbjct: 668 IVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQ 727
Query: 791 KAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPE----DAIQFIVLTFYD 846
+ ++ +Q + +L + + D GN+V+Q I E D IV
Sbjct: 728 RCLDHGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKP 787
Query: 847 QVVTLSTHPYGCRVIQRVLEHCHDEKTQSI---MMDEILQS-----VCMLAQDQYGNYVV 898
+ + LS H +G VI+++L KT + M+ EIL + + L D YGNYV+
Sbjct: 788 RAIELSIHKFGSNVIEKIL------KTAIVSEPMILEILNNGGETGIQSLLNDSYGNYVL 841
Query: 899 QVCF 902
Q
Sbjct: 842 QTAL 845
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 768 LADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQK 827
+ DQ G + +L +GCR +QK ++++ + +E + + + D GN++IQK
Sbjct: 560 VLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQK 619
Query: 828 CIECVPEDAIQFIVLTFYD--QVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSV 885
+E V + Q IVLT V +S +P+G R +Q+++E ++ I++D +
Sbjct: 620 LLEEVTTE--QRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYT 677
Query: 886 CMLAQDQYGNYVVQVCF 902
L++D GN+V+Q C
Sbjct: 678 VQLSKDLNGNHVIQKCL 694
>sp|Q92359|YDHE_SCHPO Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC6G9.14 PE=4 SV=1
Length = 681
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 110/199 (55%), Gaps = 2/199 (1%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
+++ F DQ+G R++Q+ LE + VF E P LM D FGNY+ QK FEH +
Sbjct: 346 SNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHAS 405
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVEL-DQQTQMVKELDGHIMRCVRDQN 820
+Q + ++ +S M+G R +QK I++V DQ + +V L +++ +D N
Sbjct: 406 EAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDLN 465
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
GNHVIQKC+ ++ QFI + + +STH +GC V+QR +H + + +++
Sbjct: 466 GNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQ-LVEH 524
Query: 881 ILQSVCMLAQDQYGNYVVQ 899
I+ L QD +GNYV+Q
Sbjct: 525 IVPHALTLVQDAFGNYVLQ 543
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 129/276 (46%), Gaps = 11/276 (3%)
Query: 634 NSPVGSGSPVRHGDRNMRFPSGMRNLS--GGVMGPWHSEAGGSLDESFASSL---LDEFK 688
NS + S +HG R ++ +N S V H + ++F + L L E
Sbjct: 345 NSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHA 404
Query: 689 SNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDV 747
S + + IA +V S + +G+R +Q+ ++ ++ ++ + + + P + L D+
Sbjct: 405 SEAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDL 464
Query: 748 FGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE 807
GN+VIQK + + + D + L +S +GC V+Q+ + Q Q+V+
Sbjct: 465 NGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLVEH 524
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEH 867
+ H + V+D GN+V+Q +E + + I+ F +V LST + V+++ +
Sbjct: 525 IVPHALTLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFF 584
Query: 868 CH---DEKTQSIMMDEILQSVCMLAQDQYGNYVVQV 900
EK S +MDE + + L +D + NYV+Q
Sbjct: 585 APAAIKEKLISELMDE--KHLPKLLRDSFANYVIQT 618
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F I ++ S ++G +Q+ + A+ + + + I+P AL+L+ D FGNYV+Q
Sbjct: 484 FIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLVEHIVPHALTLVQDAFGNYVLQ 543
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL--DGHI 812
E + + V LS Q + V++K I + +++ EL + H+
Sbjct: 544 YVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFFAPAAIKEKLISELMDEKHL 603
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCH 869
+ +RD N+VIQ ++ +V + ++ P G R++ + LE H
Sbjct: 604 PKLLRDSFANYVIQTALDNASVKQRAELVERIKPLIPSIKNTPCGRRILSK-LERRH 659
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%)
Query: 774 GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVP 833
++L+ +GCR +Q+ +E + E ++ + D GN++ QK E
Sbjct: 346 SNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHAS 405
Query: 834 EDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQY 893
E + ++V +S + +G R +Q++++ S +++ + +V +L +D
Sbjct: 406 EAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDLN 465
Query: 894 GNYVVQVCFG 903
GN+V+Q C
Sbjct: 466 GNHVIQKCLN 475
>sp|P39016|MPT5_YEAST Suppressor protein MPT5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MPT5 PE=1 SV=2
Length = 859
Score = 136 bits (342), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 121/208 (58%), Gaps = 16/208 (7%)
Query: 705 VEFSADQYGSRFIQQKLETATTEEKNMV----FQEIMPQALSLMTDVFGNYVIQKFFEHG 760
++ + DQ+G RF+Q+KLET + E NMV +++I P L L+ D FGNY++QK ++
Sbjct: 216 IKLATDQFGCRFLQKKLETPS--ESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYL 273
Query: 761 TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV-----KELDG--HIM 813
TA Q L + +V +S+ YG R +QK I+ V+ + Q ++ +E ++
Sbjct: 274 TAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVV 333
Query: 814 RCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQ--VVTLSTHPYGCRVIQRVLEHCHDE 871
+ D NGNHVIQKCI FI+ +Q ++T+STH +GC V+Q++L C +
Sbjct: 334 TLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLSVCTLQ 393
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
+ I + +I+Q + L DQ+GNY++Q
Sbjct: 394 QIFKISV-KIVQFLPGLINDQFGNYIIQ 420
Score = 66.6 bits (161), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 101/197 (51%), Gaps = 17/197 (8%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTE-EKNMVF----QEI-- 736
L ++ + + K + I +V + S +QYG+R +Q+ ++T E + +++ QE
Sbjct: 269 LCDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTS 328
Query: 737 MPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT--GHVLTLSLQMYGCRVIQKAIE 794
+ Q ++L+ D+ GN+VIQK + S+ + D + +++T+S +GC V+QK +
Sbjct: 329 IEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLS 388
Query: 795 VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLT-----FYDQVV 849
V L Q ++ ++ + + DQ GN++IQ ++ D F +L +++
Sbjct: 389 VCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELD---FYLLAELFNRLSNELC 445
Query: 850 TLSTHPYGCRVIQRVLE 866
LS + V+++ ++
Sbjct: 446 QLSCLKFSSNVVEKFIK 462
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 11/139 (7%)
Query: 777 LTLSLQMYGCRVIQKAIEVVELDQQTQ--MVKELDGHIMRCVRDQNGNHVIQKCIECVPE 834
+ L+ +GCR +QK +E + M +++ + + D GN+++QK + +
Sbjct: 216 IKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTA 275
Query: 835 DAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEI------LQSVCML 888
+ ++ T Y V +S + YG R +Q++++ +E +++ ++ V L
Sbjct: 276 EQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVTL 335
Query: 889 AQDQYGNYVVQVC---FGP 904
D GN+V+Q C F P
Sbjct: 336 INDLNGNHVIQKCIFKFSP 354
>sp|Q9LM20|PUM8_ARATH Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana
GN=APUM8 PE=3 SV=2
Length = 515
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 120/208 (57%), Gaps = 5/208 (2%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQK 755
++SE G+V + DQ+G RF+Q E + + ++F E++P + LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 756 FFEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGH 811
+ Q ++ +T G ++ +SL YG RV+Q+ +E ++ +Q +VK L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 812 IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +RD NGNHVIQ+C++C+ + +FI + ++TH +GC V+Q+ + +
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGL 374
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
+ + ++ EI ++ LAQD YGNY VQ
Sbjct: 375 QREK-LVTEISRNSLFLAQDPYGNYAVQ 401
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 100/199 (50%), Gaps = 1/199 (0%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHG 760
G ++ S + YG+R +Q+ +E+ T ++ ++V + P L+L+ D+ GN+VIQ+ +
Sbjct: 276 GQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCL 335
Query: 761 TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
+ + + T + ++ +GC V+QK I Q+ ++V E+ + + +D
Sbjct: 336 STEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPY 395
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
GN+ +Q +E AI ++ V LS + +++R L HC + + Q +
Sbjct: 396 GNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELI 455
Query: 881 ILQSVCMLAQDQYGNYVVQ 899
+ +L QD Y N+V+Q
Sbjct: 456 SVPHFDILIQDPYANFVIQ 474
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 81/184 (44%), Gaps = 1/184 (0%)
Query: 683 LLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALS 742
L++ K+ K S + + D G+ IQ+ L+ +TE+ +F++ +
Sbjct: 294 LVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCID 353
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 802
+ T G V+QK + + Q +L +++ + L L+ YG +Q +E+ +
Sbjct: 354 IATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIA 413
Query: 803 QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIV-LTFYDQVVTLSTHPYGCRVI 861
M+ +L GH + + +H++++C+ PE Q + L L PY VI
Sbjct: 414 AMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVI 473
Query: 862 QRVL 865
Q L
Sbjct: 474 QAAL 477
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 771 QLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIE 830
+ G+V ++ +GCR +Q E + E+ H++ + D GN+++QK ++
Sbjct: 198 EFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLD 257
Query: 831 -CVPEDAIQFIVLTFYD--QVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCM 887
C E Q I++ + Q++ +S + YG RV+QR++E K S++ +
Sbjct: 258 VCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPGFLN 317
Query: 888 LAQDQYGNYVVQVCF 902
L +D GN+V+Q C
Sbjct: 318 LIRDLNGNHVIQRCL 332
>sp|Q9C9R6|PUM7_ARATH Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana
GN=APUM7 PE=3 SV=2
Length = 650
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 122/207 (58%), Gaps = 5/207 (2%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+ +I G+V + DQ+G RF+Q+ + T+ + ++F E++ + LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 757 FEHGTA---SQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVK-ELDGHI 812
+ T +Q+ +A + G ++ +SL YG RV+Q+ +E + +Q +VK L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ ++D NGNHVIQ+C++C+ + +FI ++TH +GC V+Q+ + + ++
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQ 510
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQ 899
+ ++ EI ++ +LAQD +GNY VQ
Sbjct: 511 REKLIA-EISRNSLLLAQDPFGNYAVQ 536
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 1/203 (0%)
Query: 698 SEIAGHVVEFSADQYGSRFIQQKLETATT-EEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+E G ++ S + YG+R +Q+ +ET + ++ ++V + P L L+ D+ GN+VIQ+
Sbjct: 407 TEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDLIKDLNGNHVIQRC 466
Query: 757 FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCV 816
+ + + + D T ++ +GC V+QK I Q+ +++ E+ + +
Sbjct: 467 LQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSLLLA 526
Query: 817 RDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSI 876
+D GN+ +Q IE A+ ++ V LS + +++R L HC + + Q +
Sbjct: 527 QDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRPQIV 586
Query: 877 MMDEILQSVCMLAQDQYGNYVVQ 899
+ L QD Y N+V+Q
Sbjct: 587 RELVSVPHFDQLLQDPYANFVIQ 609
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
Query: 772 LTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIE- 830
+ G+V ++ +GCR +Q+ + + E+ H++ + D GN+++QK ++
Sbjct: 334 IQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDV 393
Query: 831 CVPEDAIQFIVLTFYD--QVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCML 888
C E Q +++ + Q++ +S + YG RV+QR++E K S++ + L
Sbjct: 394 CTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLDL 453
Query: 889 AQDQYGNYVVQVCF 902
+D GN+V+Q C
Sbjct: 454 IKDLNGNHVIQRCL 467
>sp|Q09829|YAD3_SCHPO Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC4G8.03c PE=4 SV=1
Length = 780
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 112/199 (56%), Gaps = 2/199 (1%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
GH+ DQYG R++Q+ L+ ++ F EI + LM D FGNY+ QK F + +
Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYAS 524
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ-MVKELDGHIMRCVRDQN 820
Q + + + ++ + +YG R +Q I+ + ++Q ++K + + D N
Sbjct: 525 REQKLSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNN 584
Query: 821 GNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
G HV+QKCI P + ++ + L+ + ++TL+T+ +GC ++QR L+ + + Q +++
Sbjct: 585 GTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGD-IQERLVNS 643
Query: 881 ILQSVCMLAQDQYGNYVVQ 899
I++S +L Q+ YGNY+VQ
Sbjct: 644 IIKSCLLLVQNAYGNYLVQ 662
Score = 74.3 bits (181), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 107/216 (49%), Gaps = 4/216 (1%)
Query: 687 FKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMT 745
+ S + K L+ I +V+ ++ YG+R +Q ++ T+ E+ +++ + I+P +L
Sbjct: 522 YASREQKLSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLAC 581
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D G +V+QK ++ L + +++TL+ +GC ++Q+ ++ D Q ++V
Sbjct: 582 DNNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLV 641
Query: 806 KELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVL 865
+ + V++ GN+++Q +E + + I+ F+ + LS + I++ +
Sbjct: 642 NSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTERIIEKFFGNICKLSLQKFSSNAIEQCI 701
Query: 866 EHCHDEKTQSIMMDEILQ--SVCMLAQDQYGNYVVQ 899
T+ M+ E L ++ L D Y NYV+Q
Sbjct: 702 RTA-SPSTREQMLQEFLSFPNIEQLLDDCYANYVMQ 736
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/218 (16%), Positives = 93/218 (42%), Gaps = 3/218 (1%)
Query: 683 LLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALS 742
++D+ SN+ L I + + D G+ +Q+ + E+ +F + ++
Sbjct: 555 IIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENLIT 614
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 802
L T+ G ++Q+ + L + + L L YG ++Q +E+
Sbjct: 615 LATNRHGCCILQRCLDRTNGDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQPYTE 674
Query: 803 QMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTF--YDQVVTLSTHPYGCRV 860
+++++ G+I + + ++ I++CI + ++ F + + L Y V
Sbjct: 675 RIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQMLQEFLSFPNIEQLLDDCYANYV 734
Query: 861 IQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVV 898
+QR L + DE + +++ I + + ++G +++
Sbjct: 735 MQRFL-NVADESQKFLILRSISHVIPKIQNTRHGRHIL 771
Score = 40.8 bits (94), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 844 FYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
F + T+ YGCR +Q++L+ + + S+ EI QSV L D +GNY+ Q F
Sbjct: 463 FLGHLSTICKDQYGCRYLQKLLDE-NPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLF 520
>sp|Q9LVC3|PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2
Length = 596
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 5/210 (2%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
++E G + + DQ+G RF+Q+ + M+F EI+ LM D FGNY++QK
Sbjct: 275 IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKL 334
Query: 757 FEHGTASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH-I 812
E Q ++ +T G ++ +S M+G R +QK +E + +++ ++ H I
Sbjct: 335 LEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGI 394
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEK 872
+ +++ NGNHV+Q+C++ + +F+ V L+T +GC V+Q+ L + E+
Sbjct: 395 VHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQ 454
Query: 873 TQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
Q ++ EI + +L+QD +GNYV+Q F
Sbjct: 455 KQH-LVSEIASNALLLSQDPFGNYVLQYVF 483
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 2/169 (1%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F H VE + D++G +Q+ L + E+K + EI AL L D FGNYV+Q
Sbjct: 421 FLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQ 480
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELD--GHI 812
FE E+ +QL G+ LS+Q V++K +++ + + ++++EL G +
Sbjct: 481 YVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIRELINYGRL 540
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVI 861
+ + D GN+VIQ ++ + +V + +L T+PYG +V+
Sbjct: 541 DQVMLDPYGNYVIQAALKQSKGNVHALLVDAIKLNISSLRTNPYGKKVL 589
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 40/236 (16%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHG 760
G +++ S D +G+R +Q+ +ETA EE+ +++ + + L+ +V GN+V+Q+ ++
Sbjct: 355 GLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGIVHLIKNVNGNHVVQRCLQYL 414
Query: 761 TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
+ L + H + L+ +GC V+QK + E +Q+ +V E+ + + +D
Sbjct: 415 LPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNALLLSQDPF 474
Query: 821 GNHV------------------------------------IQKCIECVPEDAIQFIV--L 842
GN+V ++KC++ + I+ L
Sbjct: 475 GNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHRARIIREL 534
Query: 843 TFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVV 898
Y ++ + PYG VIQ L+ ++++D I ++ L + YG V+
Sbjct: 535 INYGRLDQVMLDPYGNYVIQAALKQSKG-NVHALLVDAIKLNISSLRTNPYGKKVL 589
>sp|Q9LDW3|PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2
Length = 556
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 113/202 (55%), Gaps = 5/202 (2%)
Query: 702 GHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGT 761
G V + DQ G R +Q+ ++ + ++F+E++ + L TD FGNY+IQK E
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303
Query: 762 ASQVRELADQLT---GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHIMRCVR 817
Q ++ +LT G ++ +S+ YG RV+QK IE V +Q +VK L + R
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363
Query: 818 DQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIM 877
+ NGNHVI C++ + +FI+ + ++T +GC V+QR + + E+ + +
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEK-L 422
Query: 878 MDEILQSVCMLAQDQYGNYVVQ 899
+DEI ++ +LAQD +GNY+VQ
Sbjct: 423 VDEISRNSLLLAQDPFGNYLVQ 444
Score = 80.1 bits (196), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 111/208 (53%), Gaps = 7/208 (3%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQ 754
L+ G +V+ S + YG+R +Q+ +ET TT+E+ ++V ++P LSL ++ GN+VI
Sbjct: 313 RLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVIL 372
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMR 814
+ + + + + + T + ++ +GC V+Q+ + +Q ++V E+ + +
Sbjct: 373 NCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLL 432
Query: 815 CVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQ 874
+D GN+++Q IE + ++ V L+T +G V+++ L + + ++Q
Sbjct: 433 LAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQ 490
Query: 875 SIMMDEILQSVCM--LAQDQYGNYVVQV 900
+++E++ + L QD Y NYV+Q
Sbjct: 491 --IVNELVSVLNFGYLLQDPYANYVIQC 516
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
Query: 774 GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVP 833
G V ++ GCR++QK ++ + KE+ +++ D GN++IQK IE
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303
Query: 834 EDAIQFIVLTFYDQ---VVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQ 890
E+ I++ + +V +S + YG RV+Q+++E ++ S++ ++ L +
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363
Query: 891 DQYGNYVVQVC 901
+ GN+V+ C
Sbjct: 364 ELNGNHVILNC 374
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSL 743
L F N K F L +E + ++G +Q+ + + E+ + EI +L L
Sbjct: 375 LKFFSPNDNK-FILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLL 433
Query: 744 MTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
D FGNY++Q E + +L G+ + L+ Q +G V++K + + ++Q
Sbjct: 434 AQDPFGNYLVQYIIEKKVGGV--NVLFELRGNYVKLATQKFGSHVVEKCLRYYP-ESRSQ 490
Query: 804 MVKEL-----DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVV---TLSTHP 855
+V EL G+++ +D N+VIQ C F+ + ++V L P
Sbjct: 491 IVNELVSVLNFGYLL---QDPYANYVIQ----CALSKTKGFVRASLVEKVRRYENLKMTP 543
Query: 856 YGCRVIQRVL 865
Y R+ + L
Sbjct: 544 YCKRIFSKNL 553
>sp|Q1PFN9|PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1
Length = 564
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 21/253 (8%)
Query: 663 VMGPWHSEAGGSLDESFASSLLDEF------------KSNKTKCFELSEIAGHVVEFSAD 710
++ P+H + G L AS L D KSN + EI G V + D
Sbjct: 205 LLSPFHEKVSGKLG---ASYLEDTVLIGQGSYGKMSPKSN-NDLVSMVEIYGSVNLMAKD 260
Query: 711 QYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELAD 770
Q G R +Q+ +E T E ++ I+ + L D FGNY++QK F+ Q +
Sbjct: 261 QIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQRTLIVS 320
Query: 771 QLTGH---VLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQ 826
LT + ++ + L YG RV+QK IE V+ QQ +VK L + V+D NGNHVIQ
Sbjct: 321 VLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQ 380
Query: 827 KCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVC 886
C++ + + +F++ ++ H +GC V+Q + + + + ++ EI ++
Sbjct: 381 SCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRER-LVAEISRNSL 439
Query: 887 MLAQDQYGNYVVQ 899
L+QD +GNYVVQ
Sbjct: 440 HLSQDPFGNYVVQ 452
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 704 VVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTA 762
++ + YG+R +Q+ +ET T+++ +V + P L+L+ D+ GN+VIQ +
Sbjct: 329 LIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGP 388
Query: 763 SQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGN 822
+ + + T + +++ +GC V+Q I Q+ ++V E+ + + +D GN
Sbjct: 389 NDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLHLSQDPFGN 448
Query: 823 HVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEIL 882
+V+Q I+ A++ +V F L+T + VI++ L + + + + +
Sbjct: 449 YVVQYLID-QQVSAVKLLV-QFRMHYAELATQKFSSHVIEKCLRKYPESRAEIVRELLCV 506
Query: 883 QSVCMLAQDQYGNYVVQ 899
+ L QD Y NYV+Q
Sbjct: 507 PNFEYLLQDPYANYVIQ 523
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Query: 771 QLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIE 830
++ G V ++ GCRV+QK +E + ++ + H++ D GN+++QK +
Sbjct: 249 EIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFD 308
Query: 831 CVPEDAIQFIVLTFYD---QVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCM 887
E+ IV +++ + + YG RV+Q+++E ++ +++ +
Sbjct: 309 VSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLA 368
Query: 888 LAQDQYGNYVVQVCF 902
L +D GN+V+Q C
Sbjct: 369 LVKDLNGNHVIQSCL 383
Score = 38.1 bits (87), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 841 VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQV 900
++ Y V ++ GCRV+Q+++E + + I++ I+ V L+ D +GNY+VQ
Sbjct: 247 MVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILL-AIIDHVVELSMDPFGNYIVQK 305
Query: 901 CF 902
F
Sbjct: 306 LF 307
>sp|Q9LP21|PUM10_ARATH Putative pumilio homolog 10 OS=Arabidopsis thaliana GN=APUM10 PE=3
SV=2
Length = 528
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 108/208 (51%), Gaps = 7/208 (3%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
+ EI G V + DQ G R +Q+ +E T + ++F EI+ + L D GNY++QK
Sbjct: 211 MVEIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKL 270
Query: 757 FEHGTASQVRELADQLTG---HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHI 812
Q + LT ++ + L G RVIQK I+ V+ QQ +VK L+
Sbjct: 271 LVVSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGF 330
Query: 813 MRCVRDQNGNHVIQKCIE-CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ V D NG HV+Q C+E VP D +F+V + L+TH YGC V+Q L +
Sbjct: 331 LVLVNDSNGYHVLQSCLEFLVPNDN-KFVVEAATEYCAQLATHQYGCYVLQCSLINTVGL 389
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
+ + ++ EI + L+QD +GNYVVQ
Sbjct: 390 QHER-LVAEISRDSLRLSQDPFGNYVVQ 416
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 704 VVEFSADQYGSRFIQQKLETATTEEK-NMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTA 762
+++ + G+R IQ+ ++T T+++ +V + P L L+ D G +V+Q E
Sbjct: 293 LIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGFLVLVNDSNGYHVLQSCLEFLVP 352
Query: 763 SQVRELADQLTGHVLTLSLQMYGCRVIQKA-IEVVELDQQTQMVKELDGHIMRCVRDQNG 821
+ + + + T + L+ YGC V+Q + I V L Q ++V E+ +R +D G
Sbjct: 353 NDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGL-QHERLVAEISRDSLRLSQDPFG 411
Query: 822 NHVIQKCIECVPEDAIQFI--VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMD 879
N+V+Q C+ + + + +L F + L+T + VI++ L + + + ++
Sbjct: 412 NYVVQ----CLIDQQVSSVNLLLPFRTHCIELATQKFSSHVIEKCLRKYPESRAE--IVR 465
Query: 880 EILQ--SVCMLAQDQYGNYVVQ 899
E+L + L QD Y NYV+Q
Sbjct: 466 ELLSYPNFEQLLQDPYANYVIQ 487
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F + + + + QYG +Q L + + EI +L L D FGNYV+Q
Sbjct: 357 FVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPFGNYVVQ 416
Query: 755 KFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH--I 812
+ +S L H + L+ Q + VI+K + + + ++V+EL +
Sbjct: 417 CLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLRKYP-ESRAEIVRELLSYPNF 473
Query: 813 MRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVL 865
+ ++D N+VIQ + V + A++ ++ + L ++PY ++ + +
Sbjct: 474 EQLLQDPYANYVIQTALS-VTKGAVRARLVEKVKRFGKLQSNPYCKKIFSKTI 525
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 9/160 (5%)
Query: 710 DQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELA 769
D G +Q LE + V + L T +G YV+Q + Q L
Sbjct: 336 DSNGYHVLQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLV 395
Query: 770 DQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL---DGHIMRCVRDQNGNHVIQ 826
+++ L LS +G V+Q I DQQ V L H + + +HVI+
Sbjct: 396 AEISRDSLRLSQDPFGNYVVQCLI-----DQQVSSVNLLLPFRTHCIELATQKFSSHVIE 450
Query: 827 KCIECVPEDAIQFIV-LTFYDQVVTLSTHPYGCRVIQRVL 865
KC+ PE + + L Y L PY VIQ L
Sbjct: 451 KCLRKYPESRAEIVRELLSYPNFEQLLQDPYANYVIQTAL 490
>sp|O74438|MCP2_SCHPO Meiotic coiled-coil protein 2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mcp2 PE=4 SV=1
Length = 703
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 115/215 (53%), Gaps = 6/215 (2%)
Query: 689 SNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVF 748
S + ++ + I ++ S DQ S F+QQKL+ ++ + K + I+ Q LM + F
Sbjct: 352 SERNAVYDWNVIIDKII-VSNDQQSSIFLQQKLKISSYDMKQNIVDSIISQIHPLMLNRF 410
Query: 749 GNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
GN+++Q+ FEHGTA Q+R++ + G++L L+ +GC V+QKAI+ V D + M+ EL
Sbjct: 411 GNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMMDEL 470
Query: 809 DGHIMRCVRDQNGNHVIQKCIEC----VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
I + HV QK E P + + + + ++ G V+Q +
Sbjct: 471 FLTIDVTIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVVQNM 530
Query: 865 LEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
E+C EK + ++EI+ + +A+ Q+GN+VVQ
Sbjct: 531 FENC-VEKDKRECIEEIIFHLDGIARGQWGNWVVQ 564
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/238 (20%), Positives = 97/238 (40%), Gaps = 49/238 (20%)
Query: 710 DQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELA 769
+++G+ +Q+ E T + + ++ L L TD FG +V+QK ++ T +
Sbjct: 408 NRFGNFLVQRCFEHGTAPQIRQMGSAMLGNMLKLATDPFGCHVVQKAIDNVTEDIKLAMM 467
Query: 770 DQLTGHVLTLSLQMYGCRVIQKAIEV---------------------------------- 795
D+L + + Y C V QK E
Sbjct: 468 DELFLTIDVTIMHHYACHVWQKLFETQWYEYPVNVMNRVNNALRGKWHEVAVGENGSLVV 527
Query: 796 -------VELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQV 848
VE D++ + ++E+ H+ R Q GN V+Q +E + ++ ++ ++
Sbjct: 528 QNMFENCVEKDKR-ECIEEIIFHLDGIARGQWGNWVVQHMVENGQGEDLKRVIDALLNRA 586
Query: 849 VTLSTHPYGCRVIQRVLE-------HCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
V S + +VI++ ++ + ++ + +D Q + +A DQYGNY++Q
Sbjct: 587 VEFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQPLIDIASDQYGNYLIQ 644
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 8/169 (4%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
+ G E + + GS +Q E ++K +EI+ + +GN+V+Q E+
Sbjct: 510 LRGKWHEVAVGENGSLVVQNMFENCVEKDKRECIEEIIFHLDGIARGQWGNWVVQHMVEN 569
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE-------VVELDQQTQM-VKELDGH 811
G ++ + D L + S+ + +VI+KAI+ + L Q T V
Sbjct: 570 GQGEDLKRVIDALLNRAVEFSIDQFASKVIEKAIKSGPKNFISLYLKQITNARVDRTRQP 629
Query: 812 IMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
++ DQ GN++IQ+ I+ ++ +V+L YG +V
Sbjct: 630 LIDIASDQYGNYLIQQIIQLGQPAEKNLVITHIKKHMVSLRGSKYGQKV 678
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 75/167 (44%), Gaps = 11/167 (6%)
Query: 656 MRNLSGGVMGPWHSEAGGSLDESFASSLLDE-FKSNKTKCFELSEIAGHVVEFSADQYGS 714
M ++ + G WH A G ++ + + +K +C E EI H+ + Q+G+
Sbjct: 503 MNRVNNALRGKWHEVAVGENGSLVVQNMFENCVEKDKRECIE--EIIFHLDGIARGQWGN 560
Query: 715 RFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
+Q +E E+ V ++ +A+ D F + VI+K + G + + Q+T
Sbjct: 561 WVVQHMVENGQGEDLKRVIDALLNRAVEFSIDQFASKVIEKAIKSGPKNFISLYLKQITN 620
Query: 775 H--------VLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIM 813
++ ++ YG +IQ+ I++ + ++ ++ + H++
Sbjct: 621 ARVDRTRQPLIDIASDQYGNYLIQQIIQLGQPAEKNLVITHIKKHMV 667
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 704 VVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGN---YVIQKFFEHG 760
+++ ++DQYG+ IQQ ++ EKN+V I +SL +G Y+++K+
Sbjct: 630 LIDIASDQYGNYLIQQIIQLGQPAEKNLVITHIKKHMVSLRGSKYGQKVAYLVEKWNSQK 689
Query: 761 TASQV 765
S V
Sbjct: 690 QVSSV 694
>sp|Q09312|FBF2_CAEEL Fem-3 mRNA-binding factor 2 OS=Caenorhabditis elegans GN=fbf-2 PE=1
SV=1
Length = 632
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 122/239 (51%), Gaps = 40/239 (16%)
Query: 697 LSEI--AGHVVEFSADQYGSRFIQQKLE-TATTEEKNMVFQEIMPQA---LSLMTDVFGN 750
LSE+ +G +++F+ D+ G +F+++ ++ + T+ +K +F++++ + L L T++FGN
Sbjct: 185 LSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGN 244
Query: 751 YVIQKFF-------EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
Y++Q + G + +L + ++ + + L + CRVIQ +++ ++L +
Sbjct: 245 YLVQSVIGISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACK 304
Query: 804 MVKEL--DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVT------LSTHP 855
+V+ L D ++ DQN NHVIQK + +P +FIV D V T + +
Sbjct: 305 LVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIV----DFVATPEHLRQICSDK 360
Query: 856 YGCRVIQRVLEHCH---------------DEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
YGCRV+Q ++E E+ +M + LA ++Y NY++Q
Sbjct: 361 YGCRVVQTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQ 419
>sp|Q9N5M6|FBF1_CAEEL Fem-3 mRNA-binding factor 1 OS=Caenorhabditis elegans GN=fbf-1 PE=1
SV=1
Length = 614
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 122/240 (50%), Gaps = 42/240 (17%)
Query: 697 LSEI--AGHVVEFSADQYGSRFIQQKLE-TATTEEKNMVFQEIMPQA---LSLMTDVFGN 750
LSE+ +G +++F+ D+ G +F+++ ++ + T+ +K +F++++ + L L T++FGN
Sbjct: 183 LSEVLDSGDLMKFAVDKTGCQFLEKAVKGSLTSYQKFQLFEQVIGRKDDFLKLSTNIFGN 242
Query: 751 YVIQKF-------FEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQ 803
Y +Q+ ++ + +L + ++ + + L + CRVIQ +++ ++L +
Sbjct: 243 YFVQEIIGMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACK 302
Query: 804 MVKEL--DGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVT------LSTHP 855
+V+ L D ++ DQN NHVIQK + +P +FIV D V T +
Sbjct: 303 LVQALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIV----DFVATPEHLRQICFDK 358
Query: 856 YGCRVIQRVLE----------------HCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
YGCRV+Q ++E H + Q +M + LA ++Y NY++Q
Sbjct: 359 YGCRVVQTIIEKLTADSINVDLTSAAQHLRERALQRLMT-SVTNRCQELATNEYANYIIQ 417
>sp|Q10238|MPF1_SCHPO Meiotic PUF family protein 1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mpf1 PE=4 SV=1
Length = 581
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 106/199 (53%), Gaps = 5/199 (2%)
Query: 705 VEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQ 764
+ F DQ S +QQ+L+ E+ + I+P +++LM + FGN++IQK FE+ T +Q
Sbjct: 261 IIFQNDQAASLSLQQQLKNEDIEDNINLINTILPFSVTLMKNKFGNFLIQKCFEYSTEAQ 320
Query: 765 VRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHV 824
++ + L HV LS+ +G V+QK++E+ +++EL + + ++ HV
Sbjct: 321 LQSFSYFLKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPATLMQRHSCHV 380
Query: 825 IQKCIECVPEDAIQFIVLTFYDQV----VTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
QK E + + I F ++ + +S G V+Q + E+C EK + +DE
Sbjct: 381 WQKFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENC-KEKDKRTCLDE 439
Query: 881 ILQSVCMLAQDQYGNYVVQ 899
I+ ++ + Q+GN+V+Q
Sbjct: 440 IINNMDQIICGQWGNWVIQ 458
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 104/231 (45%), Gaps = 27/231 (11%)
Query: 693 KCFELSE----------IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALS 742
KCFE S + HV E S D +GS +Q+ LE N + +E++ +
Sbjct: 311 KCFEYSTEAQLQSFSYFLKKHVKELSIDAFGSHVLQKSLEIYPERFTNNLIEELIECLPA 370
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELAD----QLTGHVLTLSLQMYGCRVIQKAIEVVEL 798
+ +V QKFFE S V + D ++ G L +S+ G V+Q E +
Sbjct: 371 TLMQRHSCHVWQKFFETRRKSLVDGIFDHFNKKMQGKWLQVSVSEMGSLVVQTIFENCKE 430
Query: 799 DQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGC 858
+ + E+ ++ + + Q GN VIQ IE E Q I+ + +V + ST+ Y
Sbjct: 431 KDKRTCLDEIINNMDQIICGQWGNWVIQHIIEHGSEPDKQRILNSLLKEVESYSTNRYAS 490
Query: 859 RVIQRVLEHCH----DEKTQSIMMDE------ILQSVCMLAQDQYGNYVVQ 899
+V++R L CH D + I + LQ + A +QYGNY+VQ
Sbjct: 491 KVVERALRVCHVTFFDRYVKEITTPQNELPTIFLQEI---ASNQYGNYIVQ 538
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFE 758
++ G ++ S + GS +Q E ++K EI+ ++ +GN+VIQ E
Sbjct: 403 KMQGKWLQVSVSEMGSLVVQTIFENCKEKDKRTCLDEIINNMDQIICGQWGNWVIQHIIE 462
Query: 759 HGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDG-------- 810
HG+ + + + L V + S Y +V+++A+ V + + VKE+
Sbjct: 463 HGSEPDKQRILNSLLKEVESYSTNRYASKVVERALRVCHVTFFDRYVKEITTPQNELPTI 522
Query: 811 HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
+ +Q GN+++Q ++ I + +V+L H YG R+
Sbjct: 523 FLQEIASNQYGNYIVQYLLQVATPSQINLMAEHLKKHMVSLRGHKYGQRI 572
>sp|Q9P789|YN8E_SCHPO Pumilio domain-containing protein P35G2.14 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBP35G2.14 PE=1 SV=2
Length = 1065
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 83/194 (42%), Gaps = 13/194 (6%)
Query: 696 ELSEIAGHVVEFSADQYGSRFIQQKLET---------ATTEEKNMVFQEIMPQALSLMTD 746
EL++ A + S R KL T EE + + + L +D
Sbjct: 725 ELTDFAAQIPSISKAFSSRRLNAPKLRQVRKRIDNGLCTQEEVEDIAINWLDEVSDLSSD 784
Query: 747 VFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV- 805
GN V+QK F++ + + +++ H+ + + G QK ++V + Q +++
Sbjct: 785 HLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLIA 844
Query: 806 KELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
K L +I DQ GN+V+Q C++ P + F+ +Q ++ YG R ++
Sbjct: 845 KHLQPYIPLLFADQFGNYVVQTCLKFGAPMN--DFVFEAILNQFWVIAQSRYGSRAVRAC 902
Query: 865 LEHCHDEKTQSIMM 878
LE + Q +++
Sbjct: 903 LESPDVTEEQRVLV 916
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 38/85 (44%)
Query: 818 DQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIM 877
D GN V+QK + + + ++ + + H G Q++++ E ++
Sbjct: 784 DHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQMRLI 843
Query: 878 MDEILQSVCMLAQDQYGNYVVQVCF 902
+ + +L DQ+GNYVVQ C
Sbjct: 844 AKHLQPYIPLLFADQFGNYVVQTCL 868
>sp|Q9FMH4|PUM13_ARATH Putative pumilio homolog 13 OS=Arabidopsis thaliana GN=APUM13 PE=3
SV=1
Length = 527
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 719 QKLETATTEEKNMVFQEIMPQ----ALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
Q L T+ E N IM AL L + YVI F T+SQ R L + ++
Sbjct: 302 QVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQ 361
Query: 775 HVLTLSLQMYGCRVIQKAIE---VVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC 831
H +++ GC ++Q+ + V + + +++ E+ H ++ + +GN+V+Q +E
Sbjct: 362 HCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVEL 421
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQD 891
+ +V L+ + YG V+Q++L+ ++ I++D +L+ + L D
Sbjct: 422 DNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLK-LRGIDSKLIVVD-LLRGIDTLLLD 479
Query: 892 QYGNYVVQVCF 902
+GNYV+Q +
Sbjct: 480 PFGNYVIQTAW 490
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 692 TKCFELSEIAG-HVVEFSADQYGSRFIQQKLETATT---EEKNMVFQEIMPQALSLMTDV 747
++C L E+ H + + DQ G +QQ + E + + E++ AL L +
Sbjct: 350 SQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNC 409
Query: 748 FGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE 807
GNYV+Q E + L ++L + L+ YG V+QK +++ +D + +V
Sbjct: 410 HGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDSKLIVVDL 469
Query: 808 LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
L G I + D GN+VIQ ED Q + + + + +G ++++++
Sbjct: 470 LRG-IDTLLLDPFGNYVIQTAWFVSKEDVRQMLRYYIERNIRLMRCNKFGNKILEKL 525
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 123/283 (43%), Gaps = 59/283 (20%)
Query: 662 GVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKL 721
GV W S G + ++ A+S ++ + G + D+ S+ +++ +
Sbjct: 184 GVNNSWRSNEGCTYNQDQAASSMENGR-------------GSYFSIATDRVWSKELEKTI 230
Query: 722 ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVL---- 777
T E +M+F ++ LM D FGN V++ ++ Q+ + D +T H+
Sbjct: 231 FVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVTRHISKFVN 290
Query: 778 -------TLSLQMYGCRV----------IQKAIEVVELD--------------------- 799
TL++Q+ + I AI V L
Sbjct: 291 ICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILACFRMFTSS 350
Query: 800 QQTQMVKELDGHIMRCVRDQNGNHVIQKCI--ECVPEDAI-QFIVLTFYDQVVTLSTHPY 856
Q ++++ + H + DQNG ++Q+C E VP I Q ++ + + L + +
Sbjct: 351 QCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHALKLCLNCH 410
Query: 857 GCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
G V+Q V+E + +T ++++++L++ LA+++YG++VVQ
Sbjct: 411 GNYVVQYVVELDNQHET-DLLVNKLLRNYAHLARNKYGSHVVQ 452
>sp|O60059|YG58_SCHPO Pumilio domain-containing protein C56F2.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC56F2.08c PE=1
SV=1
Length = 661
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 725 TTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMY 784
T EE ++ + ++ L +D GN V+QKFFE+ + + +++ ++ + +
Sbjct: 181 TQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERIAPYLAAIGIHKN 240
Query: 785 GCRVIQKAIEVVELDQQTQM-VKELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVL 842
G QK I+V ++Q + VK L + DQ GN+V Q C+ P++ F V+
Sbjct: 241 GTWAAQKIIDVASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCLRFKYPKNTFLFEVM 300
Query: 843 TFYDQVVTLSTHPYGCRVIQRVLEHCHDE-KTQSIMMDEILQSVCMLAQDQYG 894
+ +G R I+ LE+ + + Q++++ I+ + +LA + G
Sbjct: 301 A--RHCCEIGQSRFGARAIRACLENENATFEQQALVVASIIINSHLLATNSNG 351
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 31/179 (17%)
Query: 724 ATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQM 783
A+ E N V EI+P +L + F AS++RE+ + T
Sbjct: 139 ASAIENNKVATEILPPVETLRSRQF------------EASKLREIRKNIDSGFYT----- 181
Query: 784 YGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLT 843
Q+ IEV+ + + + D GN V+QK E + + ++
Sbjct: 182 ------QEEIEVI--------ARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLER 227
Query: 844 FYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
+ + H G Q++++ EK +++ + +L DQ+GNYV Q C
Sbjct: 228 IAPYLAAIGIHKNGTWAAQKIIDVASTEKQMDLIVKHLRPYTALLYFDQFGNYVAQCCL 286
>sp|Q9C8B8|PUM17_ARATH Putative pumilio homolog 17 OS=Arabidopsis thaliana GN=APUM17 PE=5
SV=2
Length = 332
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 687 FKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKL-ETATTEEKNMVFQEIMPQALSLMT 745
FK +K + I + + + DQYG + + + E ++ + + AL L
Sbjct: 142 FKQDKRELMY-DHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSN 200
Query: 746 DVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMV 805
D +GN+V+Q + + +AD+L G+ + LS + YG ++++ +EV ++ T ++
Sbjct: 201 DAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVL 260
Query: 806 KELDGH---IMRCVRDQNGNHVIQKCIE 830
L ++R R +NGN V+ K +E
Sbjct: 261 DLLACKTEMLIRLARSENGNFVVCKLLE 288
Score = 36.6 bits (83), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 44/185 (23%)
Query: 719 QKLETATTEEKNMVFQEIMPQALSLMTDVFGNYV-IQ--KFFEHGTASQVRELA-DQLTG 774
QKL + + F IM + +M D + +YV IQ + F+ REL D +
Sbjct: 101 QKLMRMSDDMDVFFFVAIMRLFIHVMIDKYASYVAIQGMRIFKQDK----RELMYDHILR 156
Query: 775 HVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPE 834
+ L L+ YGC + +++KELD R + ++ V
Sbjct: 157 YALFLARDQYGCIALN------------EIIKELDDPYYR-----------DELMDIVSN 193
Query: 835 DAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYG 894
+A+ LS YG V+Q VL+ HD + + D++ L+ +YG
Sbjct: 194 NAL------------LLSNDAYGNFVVQHVLK-LHDSRCTGNIADKLCGYCVELSFKKYG 240
Query: 895 NYVVQ 899
+Y+V+
Sbjct: 241 SYIVE 245
>sp|Q4PSD1|PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis thaliana GN=APUM14 PE=2 SV=1
Length = 518
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 78/174 (44%), Gaps = 10/174 (5%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQ---QKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVI 753
L I + + + DQ+G +Q K E + + E + AL L + +GNYV+
Sbjct: 347 LELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVV 406
Query: 754 QKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT---QMVKELDG 810
Q E + L QL G+ L+ YG +QK +++ +D + +++E+D
Sbjct: 407 QYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLKLRWIDSRVIVIDLLREIDT 466
Query: 811 HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRV 864
++ D GN+VIQ +D + + + + + +G +V++++
Sbjct: 467 LLL----DPFGNYVIQTAWFVSKDDVRRMLRYHIERNIPMMRCNKFGNKVLEKL 516
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 15/216 (6%)
Query: 695 FELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQ 754
F+ ++ F+ D+ S + + T E + ++ ++ LM D +G+ V+Q
Sbjct: 196 FDYNQCQASFSAFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQ 255
Query: 755 KFFEHGTASQVRELADQLTGHV---LTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH 811
++ Q+ +L D +T + + + + G IQ + + + Q+ + +D
Sbjct: 256 LLMRRCSSEQIVQLVDIVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVD-- 313
Query: 812 IMRCVRDQ--NGNH---VIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLE 866
++R V Q NH VI C P + ++ ++ +GC ++Q
Sbjct: 314 VVRTVALQLSKSNHAIFVILACFRLFPLHC-RLLLELIVQNCHQIAIDQHGCCLLQLCFN 372
Query: 867 HCHD---EKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
E Q ++M+ I ++ L + YGNYVVQ
Sbjct: 373 KDRVPNLEIRQRLIMEAIANAL-RLCLNCYGNYVVQ 407
Score = 41.2 bits (95), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 100/248 (40%), Gaps = 48/248 (19%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEE----KNMVFQEIMPQALSLMTDVFGNYVIQK 755
+ G + E D YGS +Q + ++E+ ++V Q+ M Q +++ D G IQ
Sbjct: 237 LIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQ-MFQFVNICIDSLGTNAIQV 295
Query: 756 FFEH----------GTASQVRELADQLT--GHVLTLSLQMY------------------- 784
VR +A QL+ H + + L +
Sbjct: 296 LLTCINERAKDQIPRIVDVVRTVALQLSKSNHAIFVILACFRLFPLHCRLLLELIVQNCH 355
Query: 785 -------GCRVIQKAI---EVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPE 834
GC ++Q V L+ + +++ E + +R + GN+V+Q +E
Sbjct: 356 QIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNR 415
Query: 835 DAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYG 894
I +V L+ + YG +Q++L+ ++ I++D +L+ + L D +G
Sbjct: 416 YLIDALVRQLIGNYAHLARNKYGSHAVQKLLK-LRWIDSRVIVID-LLREIDTLLLDPFG 473
Query: 895 NYVVQVCF 902
NYV+Q +
Sbjct: 474 NYVIQTAW 481
>sp|Q9XI17|PUM20_ARATH Putative pumilio homolog 20 OS=Arabidopsis thaliana GN=APUM20 PE=5
SV=2
Length = 332
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 2/119 (1%)
Query: 722 ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSL 781
+ T +N +F I +AL L D +GN+VIQ+ + + L GH + LS
Sbjct: 180 DIITDAYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSF 239
Query: 782 QMYGCRVIQKAIEVVE-LDQQTQMVKELDGH-IMRCVRDQNGNHVIQKCIECVPEDAIQ 838
Q YG V+ +E E + + + E +G +MR R++ GN ++ K + ++ ++
Sbjct: 240 QKYGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKEMVR 298
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 94/192 (48%), Gaps = 15/192 (7%)
Query: 713 GSRFIQQKLETATTEEKNMVFQE-IMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQ 771
GS+ IQ+ L T++ + +F I+ + L ++TD + +YV+++ G ++
Sbjct: 103 GSKRIQKLL--GKTDDVDALFAAAILRRFLHIITDKYASYVVRR----GMTVFDKKKKKA 156
Query: 772 LTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH-IMRCVRDQNGNHVIQKCIE 830
+ H+L + + + A+ + D + ++ H + D GN VIQ+ ++
Sbjct: 157 MYEHILHYASHIARDKHGNLALNDIITDAYRNKLFDVIAHKALVLSNDAYGNFVIQRVLK 216
Query: 831 CVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQS----VC 886
+ IV++ V LS YG V+ +LE +++ ++++E+++ +
Sbjct: 217 LNDLRSKNNIVVSLRGHFVDLSFQKYGSYVVDVLLE---TKESMVVVVEELMECEGDMLM 273
Query: 887 MLAQDQYGNYVV 898
LA+++YGN++V
Sbjct: 274 RLARNEYGNFLV 285
>sp|P47135|JSN1_YEAST Protein JSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=JSN1 PE=1 SV=1
Length = 1091
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 7/144 (4%)
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLT-LSLQMYGCRVIQKAIEVVELDQQ 801
L +D GN ++QK FEH ++ ++++ + T LT + + G QK I + +Q
Sbjct: 625 LSSDYLGNTIVQKLFEH-SSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQ 683
Query: 802 TQMVKE-LDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRV 860
V + + + + DQ GN+VIQ C+ QFI + + + YG R
Sbjct: 684 IMQVTQGVKDYCTPLINDQFGNYVIQ-CVLKFGFPWNQFIFESIIANFWVIVQNRYGARA 742
Query: 861 IQRVLEHCHDEKT--QSIMMDEIL 882
++ LE HD T QSI++ ++
Sbjct: 743 VRACLE-AHDIVTPEQSIVLSAMI 765
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 85/207 (41%), Gaps = 6/207 (2%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNM-VFQEIMPQALS 742
L E S+ K L + + ++ + G+ Q+ + A T + M V Q +
Sbjct: 638 LFEHSSDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPRQIMQVTQGVKDYCTP 697
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIE---VVELD 799
L+ D FGNYVIQ + G + + + + + + YG R ++ +E +V +
Sbjct: 698 LINDQFGNYVIQCVLKFGFPWN-QFIFESIIANFWVIVQNRYGARAVRACLEAHDIVTPE 756
Query: 800 QQTQMVKELDGHIMRCVRDQNGNHVIQKCIEC-VPEDAIQFIVLTFYDQVVTLSTHPYGC 858
Q + + + + NG ++ ++ V + + ++V L H
Sbjct: 757 QSIVLSAMIVTYAEYLSTNSNGALLVTWFLDTSVLPNRHSILAPRLTKRIVELCGHRLAS 816
Query: 859 RVIQRVLEHCHDEKTQSIMMDEILQSV 885
I +VL + D+ + I++D + +V
Sbjct: 817 LTILKVLNYRGDDNARKIILDSLFGNV 843
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 818 DQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVT-LSTHPYGCRVIQRVLEHCHDEKTQSI 876
D GN ++QK E D I+ I+L + +T + H G Q+++ H + Q +
Sbjct: 628 DYLGNTIVQKLFEHS-SDIIKDIMLRKTSKYLTSMGVHKNGTWACQKMITMAHTPR-QIM 685
Query: 877 MMDEILQSVCM-LAQDQYGNYVVQVCF 902
+ + ++ C L DQ+GNYV+Q
Sbjct: 686 QVTQGVKDYCTPLINDQFGNYVIQCVL 712
>sp|Q9LVG3|PUM18_ARATH Pumilio homolog 18 OS=Arabidopsis thaliana GN=APUM18 PE=2 SV=1
Length = 327
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 106/246 (43%), Gaps = 19/246 (7%)
Query: 666 PWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAG-------HVVEFSADQYGSRFIQ 718
P H+ + + S E SN K EL +A + + ++GSR +Q
Sbjct: 40 PLHAALFNLMTDGDGVSYFKEMISNSDKT-ELQRMASLLTSDSDYFMSIVTTKFGSRRVQ 98
Query: 719 QKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLT 778
KL + + I+ + L + TD + +YV + + L +++ H L
Sbjct: 99 -KLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALD 157
Query: 779 LSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAI 837
L+ +GC + I + + + Q+++ + + +R D +GN V+Q + I
Sbjct: 158 LACDQHGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCI 217
Query: 838 QFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMM-----DEILQSVCMLAQDQ 892
I + Y Q + LS YG +++++LE + + D +++ LA+++
Sbjct: 218 HNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMR----LARNE 273
Query: 893 YGNYVV 898
+GN+VV
Sbjct: 274 FGNFVV 279
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKLETATT-EEKNMVFQEIMPQALSLMTDVFGNYVIQKFF 757
I H ++ + DQ+G + + A ++ + + + AL L D GN+V+Q
Sbjct: 150 RILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVL 209
Query: 758 EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDG-HIMRC 815
+ + +A L G + LS + YG +++K +EV E + DG +MR
Sbjct: 210 TLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRL 269
Query: 816 VRDQNGNHVIQKCIE 830
R++ GN V+ K +
Sbjct: 270 ARNEFGNFVVVKALR 284
>sp|Q9LRZ3|PUM24_ARATH Pumilio homolog 24 OS=Arabidopsis thaliana GN=APUM24 PE=2 SV=1
Length = 641
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 658 NLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFI 717
NL ++ W ++ + S L+ E + ++ G V E + SR +
Sbjct: 86 NLEQELVSLWEKMRRRNIGKEDRSKLISE---------AIRKMKGKVPEIAVSHVSSRVL 136
Query: 718 QQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVL 777
Q ++ + EK+++F E+ PQ L+L ++ + + IQK + + Q+ L GHV
Sbjct: 137 QTCVKFCSQAEKDVLFTELQPQFLNLASNKYAVHFIQKMLDGASKQQLAACISSLRGHVA 196
Query: 778 TLSLQMYGCRVIQKAIEVVELDQQTQMVKEL 808
L ++G V++ A + Q+ +++ EL
Sbjct: 197 PLLRHVFGSLVVEHAYHLGSAAQKQELLAEL 227
Score = 37.4 bits (85), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 647 DRNMRFPSGMRNLSGGVMGPWHSEAGGSLDESFASSLLDEFKSNKTKCFELSEIAGHVVE 706
DR+ +R + G V E S S +F S K +E+ +
Sbjct: 107 DRSKLISEAIRKMKGKV-----PEIAVSHVSSRVLQTCVKFCSQAEKDVLFTELQPQFLN 161
Query: 707 FSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVR 766
++++Y FIQ+ L+ A+ ++ + L+ VFG+ V++ + G+A+Q +
Sbjct: 162 LASNKYAVHFIQKMLDGASKQQLAACISSLRGHVAPLLRHVFGSLVVEHAYHLGSAAQKQ 221
Query: 767 ELADQLTGHVLTL 779
EL +L L L
Sbjct: 222 ELLAELYSTELQL 234
>sp|Q9FIE9|PUM16_ARATH Putative pumilio homolog 16 OS=Arabidopsis thaliana GN=APUM16 PE=3
SV=2
Length = 332
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKL-ETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFF 757
+I + + DQYG + + + + ++ + + AL L D +GN+V+Q
Sbjct: 153 QILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVL 212
Query: 758 EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGH---IMR 814
+ + R +AD+L G+ + LS + YG ++++ +E ++ T ++ L ++R
Sbjct: 213 KLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLACKTEMLIR 272
Query: 815 CVRDQNGNHVIQKCIECVPE 834
R + GN V+ K +E E
Sbjct: 273 LARSEYGNFVVCKALELTNE 292
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 701 AGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYV-IQ--KFF 757
+ + + ++ GS+ +Q KL + + F+ IM + +MTD + +YV IQ + F
Sbjct: 84 CDYFMVITTNKNGSKTLQ-KLMGMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVF 142
Query: 758 EHGTASQVRELA-DQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ---QTQMVKELDGHIM 813
+ REL DQ+ + L+ YGC + + I +LD + Q++ + + +
Sbjct: 143 QQDK----RELMYDQILRYACFLAGDQYGCIALNEII--TDLDDPYYRDQLLDIVANNAL 196
Query: 814 RCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKT 873
D GN V+Q ++ + I V LS YG +++R+LE D
Sbjct: 197 LLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLE-AGDVPM 255
Query: 874 QSIMMDEI---LQSVCMLAQDQYGNYVV 898
++++D + + + LA+ +YGN+VV
Sbjct: 256 ATVVLDLLACKTEMLIRLARSEYGNFVV 283
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 845 YDQVVT----LSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSVCMLAQDQYGNYVVQ 899
YDQ++ L+ YGC + ++ D + ++D + + +L+ D YGN+VVQ
Sbjct: 151 YDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQ 209
Score = 33.9 bits (76), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 697 LSEIAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKF 756
L +A + + S D YG+ +Q L+ + + ++ + L +G+Y++++
Sbjct: 188 LDIVANNALLLSNDAYGNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERL 247
Query: 757 FEHG---TASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEV 795
E G A+ V +L T ++ L+ YG V+ KA+E+
Sbjct: 248 LEAGDVPMATVVLDLLACKTEMLIRLARSEYGNFVVCKALEL 289
>sp|Q12221|PUF2_YEAST mRNA-binding protein PUF2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PUF2 PE=1 SV=1
Length = 1075
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 715 RFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTG 774
+F L T E+ +V + +P+ L +D GN VIQK FE+ +++ +R++ +
Sbjct: 559 QFDSNSLSTIEMEQLAIVMLDQLPE---LSSDYLGNTVIQKLFEN-SSNIIRDIMLRKCN 614
Query: 775 HVLT-LSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDGHIMRCVRDQNGNHVIQKCIEC- 831
LT + + G V QK I++ +Q +V + + DQ GN+VIQ ++
Sbjct: 615 KYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTPLFNDQFGNYVIQGILKFG 674
Query: 832 VPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLE 866
P ++ FI + T+ + YG R ++ LE
Sbjct: 675 FPWNS--FIFESVLSHFWTIVQNRYGSRAVRACLE 707
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 7/188 (3%)
Query: 684 LDEFKSNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATT-EEKNMVFQEIMPQALS 742
L E SN + L + ++ + G+ Q+ ++ A T + N+V +
Sbjct: 597 LFENSSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVSDYCTP 656
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQT 802
L D FGNYVIQ + G + + + H T+ YG R ++ +E + Q
Sbjct: 657 LFNDQFGNYVIQGILKFGFPWN-SFIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQC 715
Query: 803 QMVKELDGHIM---RCVRDQNGNHVIQKCIE--CVPEDAIQFIVLTFYDQVVTLSTHPYG 857
Q++ I+ D NG +I ++ +P + +V L H G
Sbjct: 716 QLLTITSLIIVLSPYLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLCCHKLG 775
Query: 858 CRVIQRVL 865
+ ++L
Sbjct: 776 SLTVLKIL 783
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 21/139 (15%)
Query: 762 ASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNG 821
A ++REL Q + L+ +++M + + +V LDQ + EL D G
Sbjct: 550 APKLRELRKQFDSNSLS-TIEM-------EQLAIVMLDQ----LPELSS-------DYLG 590
Query: 822 NHVIQKCIECVPEDAIQFIVLTFYDQVVT-LSTHPYGCRVIQRVLEHCHDEKTQSIMMDE 880
N VIQK E + I+ I+L ++ +T + H G V Q++++ + + +++
Sbjct: 591 NTVIQKLFEN-SSNIIRDIMLRKCNKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSG 649
Query: 881 ILQSVCMLAQDQYGNYVVQ 899
+ L DQ+GNYV+Q
Sbjct: 650 VSDYCTPLFNDQFGNYVIQ 668
>sp|Q9LSS8|PUM19_ARATH Putative pumilio homolog 19 OS=Arabidopsis thaliana GN=APUM19 PE=3
SV=2
Length = 327
Score = 50.1 bits (118), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 105/224 (46%), Gaps = 21/224 (9%)
Query: 688 KSNKTKCFELSEI----AGHVVEFSADQYGSRFIQQKLETATTEEKNMVF-QEIMPQALS 742
KS+KT+ ++ + + + + ++GSR +Q+ L +++ + F I+ + L
Sbjct: 64 KSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLL--GKSDDVDAFFCAAILRRFLH 121
Query: 743 LMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQ-- 800
+ TD + +YV + + L +++ H L L+ +GC + I + D
Sbjct: 122 ITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCIALNDII--TDADDPY 179
Query: 801 -QTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCR 859
+ Q+++ + + +R D +GN V+Q + I I + Y Q + LS YG
Sbjct: 180 YRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSY 239
Query: 860 VIQRVLEHCHDEKTQSIMM-----DEILQSVCMLAQDQYGNYVV 898
+++++LE + + D +++ LA++++GN+VV
Sbjct: 240 IVEKLLEVEESMVVVVVELLGCDGDRLMR----LARNEFGNFVV 279
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 3/139 (2%)
Query: 699 EIAGHVVEFSADQYGSRFIQQKLETATT-EEKNMVFQEIMPQALSLMTDVFGNYVIQKFF 757
I H ++ + DQ+G + + A ++ + + ++ AL L D GN+V+Q
Sbjct: 150 RILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVL 209
Query: 758 EHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKE-LDG-HIMRC 815
+ + +A L G + LS + YG +++K +EV E + DG +MR
Sbjct: 210 TLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRL 269
Query: 816 VRDQNGNHVIQKCIECVPE 834
R++ GN V+ K + E
Sbjct: 270 ARNEFGNFVVVKALRFTKE 288
>sp|Q15397|K0020_HUMAN Pumilio domain-containing protein KIAA0020 OS=Homo sapiens
GN=KIAA0020 PE=1 SV=3
Length = 648
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 89/214 (41%), Gaps = 18/214 (8%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ E++ F+E+ + L + +++KF +
Sbjct: 166 IQGKIKTIAFAHDSTRVIQCYIQYGNEEQRKQAFEELRDDLVELSKAKYSRNIVKKFLMY 225
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQ-----KAIEVVELDQQTQMVKELDGHIMR 814
G+ Q+ E+ GHV + +++ KAI L+Q+ + +EL G+ +
Sbjct: 226 GSKPQIAEIIRSFKGHVRKMLRHAEASAIVEYAYNDKAI----LEQRNMLTEELYGNTFQ 281
Query: 815 CVRDQNGNHVIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHC 868
+ + + + K +E PE ++ I +LT Q + H +V +
Sbjct: 282 LYKSAD-HRTLDKVLEVQPE-KLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA 339
Query: 869 HDEKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
K +S M++ I ++V LA G V C
Sbjct: 340 -PPKLRSEMIEAIREAVVYLAHTHDGARVAMHCL 372
>sp|O61345|PEN_DROME Protein penguin OS=Drosophila melanogaster GN=pen PE=2 SV=1
Length = 737
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 52/107 (48%)
Query: 714 SRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLT 773
+R IQ L+ A+ + + ++++P + + + + +Q+ ++G + +L D L
Sbjct: 182 ARVIQSMLKYASPALRAEISEKLLPFTVEMCQSKYAQFCVQRMLKYGAPATKAKLVDSLY 241
Query: 774 GHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQN 820
GH++ L+ G ++ + +Q+ M +E G + R +D N
Sbjct: 242 GHIVRLAGHSIGSGLLDSMYQSATPNQRIYMRQEFYGDLYRKAKDSN 288
>sp|Q9LXC5|PUM21_ARATH Putative pumilio homolog 21 OS=Arabidopsis thaliana GN=APUM21 PE=3
SV=1
Length = 517
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 61/123 (49%), Gaps = 5/123 (4%)
Query: 729 KNMVFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRV 788
++++F+ + A L D +G +V+Q +A++L G L+++ G V
Sbjct: 359 RDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYV 418
Query: 789 IQKAIEVVELDQQTQMVKELDGHIMRCVR---DQNGNHVIQKCIECVPEDAIQFIVLTFY 845
++K ++ + Q+++E G+ VR D+ GN V+Q + + E ++ ++ F
Sbjct: 419 VEKCLK--SDFARDQVLEEFRGNAKEWVRMTTDKFGNFVVQSALRVMKEKEMRPLLREFV 476
Query: 846 DQV 848
+++
Sbjct: 477 EKL 479
Score = 37.4 bits (85), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Query: 779 LSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNGNHVIQKCIECVPEDAIQ 838
LS YG V+Q + + T + + L G R ++ G++V++KC++ D +
Sbjct: 373 LSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEKCLKS---DFAR 429
Query: 839 FIVLTFY----DQVVTLSTHPYGCRVIQRVLEHCHDEKTQSIMMDEILQSV 885
VL + + V ++T +G V+Q L EK ++ E ++ +
Sbjct: 430 DQVLEEFRGNAKEWVRMTTDKFGNFVVQSALR-VMKEKEMRPLLREFVEKL 479
>sp|Q8BKS9|K0020_MOUSE Pumilio domain-containing protein KIAA0020 OS=Mus musculus
GN=Kiaa0020 PE=2 SV=2
Length = 647
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 88/211 (41%), Gaps = 12/211 (5%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ E++ FQE+ + L + +++KF +
Sbjct: 165 IQGKIKTIAFAHDSTRVIQCFIQYGNEEQRKQAFQELQGDLVELSKAKYSRNIVKKFLMY 224
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ QV E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 225 GSKPQVAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYK- 283
Query: 819 QNGNH-VIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +H + K +E P ++ I +LT Q + H +V +
Sbjct: 284 -SADHPTLDKVLELQPA-KLELIMDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PP 340
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
K +S +++ I ++V LA G V C
Sbjct: 341 KPRSELIEAIREAVVYLAHTHDGARVAMHCL 371
>sp|O81465|PUM15_ARATH Pumilio homolog 15 OS=Arabidopsis thaliana GN=APUM15 PE=3 SV=1
Length = 477
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 13/206 (6%)
Query: 705 VEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMT-DVFGNYVIQKFFEHGTAS 763
V +G+ IQ + + +EE+ F E + L+T DV + VI F + S
Sbjct: 231 VRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFNQFSPS 290
Query: 764 QVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDGHIMRCVRDQNG-- 821
R L + + + +++ GC +++K I + + ++KE+ +R + G
Sbjct: 291 HTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTL 350
Query: 822 --------NHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHDEKT 873
N+V+Q + + + V LS YG V+Q+ LE E +
Sbjct: 351 TPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE--SREFS 408
Query: 874 QSIMMDEILQSVCMLAQDQYGNYVVQ 899
++ E+L + L D YG+YV+Q
Sbjct: 409 SRRIIAELLSDIDSLLVDPYGDYVIQ 434
Score = 36.6 bits (83), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 37/152 (24%)
Query: 751 YVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQKAIEVVELDQQTQMVKELDG 810
YVI K G + ++ D L HV L L YG +V +K +E
Sbjct: 170 YVIAK----GLKETIDKIFDNLISHVCELMLDYYGHKVFRKLME---------------- 209
Query: 811 HIMRCVRDQNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCRVIQRVLEHCHD 870
+C +Q I + ++ V E+ +F V L H +G IQ ++
Sbjct: 210 ---KCTDEQ-----ITRVLDIVLEEPFEF---------VRLCVHTHGTHAIQGLMRSLCS 252
Query: 871 EKTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
E+ S M+ + +L +D + V+ CF
Sbjct: 253 EEQISRFMETLCYVSLLLTKDVIAHRVILFCF 284
>sp|Q562C7|K0020_RAT Pumilio domain-containing protein KIAA0020 homolog OS=Rattus
norvegicus PE=2 SV=1
Length = 647
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/211 (19%), Positives = 90/211 (42%), Gaps = 12/211 (5%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
I G + + +R IQ ++ + E++ F+E+ + L + +++KF +
Sbjct: 165 IQGKIKTIAFAHDSTRVIQCLIQYGSEEQRKWAFEELQGDLVELSKAKYSRNIVKKFLMY 224
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
G+ Q+ E+ GHV + +++ A + L+Q+ + +EL G+ + +
Sbjct: 225 GSKPQIAEIIRSFKGHVRKMLRHSEASAIVEYAYNDKAILEQRNMLTEELYGNTFQLYK- 283
Query: 819 QNGNH-VIQKCIECVPEDAIQFI------VLTFYDQVVTLSTHPYGCRVIQRVLEHCHDE 871
+ +H ++K +E P ++ I +LT Q + H +V +
Sbjct: 284 -SADHPTLEKVLEVQP-GKLELILDEMKQILTPMAQKEAVIKHSLVHKVFLDFFTYA-PP 340
Query: 872 KTQSIMMDEILQSVCMLAQDQYGNYVVQVCF 902
K +S +++ I ++V LA G V C
Sbjct: 341 KLRSELIEAIREAVVYLAHTHDGARVAMHCL 371
>sp|Q09622|PUF12_CAEEL Pumilio domain-containing protein 12 OS=Caenorhabditis elegans
GN=puf-12 PE=4 SV=1
Length = 766
Score = 40.4 bits (93), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 80/185 (43%), Gaps = 10/185 (5%)
Query: 700 IAGHVVEFSADQYGSRFIQQKLETATTEEKNMVFQEIMPQALSLMTDVFGNYVIQKFFEH 759
+ GH + SR I+ + T N +F E+ P+ + + +V+ + ++K ++
Sbjct: 278 VKGHAAKLIYAHDTSRVIECLVATEREGIINNLFNELTPEIVRMSKNVYSKFFVKKMLKN 337
Query: 760 GTASQVRELADQLTGHVLTLSLQMYGCRVIQKAI-EVVELDQQTQMVKELDGHIMRCVRD 818
GT Q + + GH TL + V++ A + Q+ ++ E G R+
Sbjct: 338 GTKEQRDIIINAFRGHAPTLLRIKHAAEVLEYAYNDFANAHQRYNIITEFYGKEFILFRE 397
Query: 819 QNGNHVIQKCIECVPEDAIQFIVLTFYDQVVTLSTHPYGCR--VIQRVL----EHCHDEK 872
N + + E PE + ++L D+V+ R ++ +++ ++C +EK
Sbjct: 398 DNIRSLTEILAE-KPEKKV--VILKHLDEVIGAVNEKETLRLSILHKLMLDFFDNCDEEK 454
Query: 873 TQSIM 877
+++
Sbjct: 455 KINLL 459
>sp|Q92347|NOP9_SCHPO Nucleolar protein 9 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=nop9 PE=3 SV=1
Length = 655
Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%)
Query: 732 VFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQK 791
+++E+ + L + +VFG+ V++K F T+ Q++ L GH + L +G +K
Sbjct: 93 IYREVQGKELIVCNNVFGSKVLEKLFPLSTSRQIKSFFSALNGHYVELIQTTFGSYAFEK 152
Query: 792 AI 793
+
Sbjct: 153 LL 154
>sp|C4R8S9|NOP9_PICPG Nucleolar protein 9 OS=Komagataella pastoris (strain GS115 / ATCC
20864) GN=NOP9 PE=3 SV=1
Length = 645
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 33/59 (55%)
Query: 732 VFQEIMPQALSLMTDVFGNYVIQKFFEHGTASQVRELADQLTGHVLTLSLQMYGCRVIQ 790
VF+E + L L+T+ + ++++ +G+ QV+ L GH L+L++ Y V++
Sbjct: 80 VFEEAKGKELKLVTNQICSKLMERLILNGSDRQVKRLFKAFNGHFLSLAVHKYSSHVLE 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 348,334,354
Number of Sequences: 539616
Number of extensions: 16223647
Number of successful extensions: 56160
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 353
Number of HSP's that attempted gapping in prelim test: 48898
Number of HSP's gapped (non-prelim): 5416
length of query: 904
length of database: 191,569,459
effective HSP length: 127
effective length of query: 777
effective length of database: 123,038,227
effective search space: 95600702379
effective search space used: 95600702379
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)