Query 002589
Match_columns 904
No_of_seqs 175 out of 1834
Neff 5.0
Searched_HMMs 29240
Date Tue Mar 26 15:46:34 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002589.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1309-1313//hhsearch_pdb/002589hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 1.0 1 1 487.5 34.6 376 506-891 4-430 (536)
2 1rzu_A Glycogen synthase 1; gl 1.0 1 1 321.3 25.2 363 512-892 1-395 (485)
3 2qzs_A Glycogen synthase; glyc 1.0 1 1 318.3 25.0 362 512-892 1-396 (485)
4 3fro_A GLGA glycogen synthase; 1.0 1 1 292.6 31.3 331 510-896 1-364 (439)
5 3nb0_A Glycogen [starch] synth 1.0 1 1 283.7 21.5 346 513-896 29-553 (725)
6 3s28_A Sucrose synthase 1; gly 1.0 1 1 263.6 19.9 360 485-895 256-697 (816)
7 2r60_A Glycosyl transferase, g 1.0 1 1 249.1 25.4 323 510-894 6-390 (499)
8 3c48_A Predicted glycosyltrans 1.0 1 1 243.0 28.6 306 507-895 16-358 (438)
9 2c4m_A Glycogen phosphorylase; 1.0 1 1 237.6 19.9 363 525-897 111-651 (796)
10 1l5w_A Maltodextrin phosphoryl 1.0 1 1 231.8 23.9 362 526-898 111-662 (796)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=1.00 E-value=1 Score=487.52 Aligned_cols=376 Identities=28% Similarity=0.436 Sum_probs=296.1
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCE
Q ss_conf 89999876799828568876779189999999999997899299996289987522223333221011002478410120
Q 002589 506 SSISSGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNK 585 (904)
Q Consensus 506 ~~~~~~MkILhIt~E~~P~akvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~~~~i~~L~~i~v~v~syfdG~~~~~~ 585 (904)
-.++..|||+|+++|++|++|+||+|+++.+|+++|+++||+|+||+|.|++..... .......+ ...+....++
T Consensus 4 ~~~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~-~~~~~~~~----~~~~~~~~~~ 78 (536)
T 3vue_A 4 HHHHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAW-DTSVVAEI----KVADRYERVR 78 (536)
T ss_dssp ----CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCE-EEEEEEEE----EETTEEEEEE
T ss_pred CCCCCCCEEEEEEEECCCHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHC-CCCEEEEE----EECCCEEEEE
T ss_conf 668997389999872431212676999999999999976996999904850222422-65168999----8368337899
Q ss_pred EEEEEECCEEEEEECCCCCCCCCCC------CCCCC------CCCCHHHHHHHHHHHHHHHHHHC-----------CCCC
Q ss_conf 3541008901998189999865446------87778------88603557899999999999709-----------9960
Q 002589 586 VWVSTIEGLPVYFIEPHHPDKFFWR------GQFYG------EHDDFRRFSFFSRAALELLLQAG-----------KQPD 642 (904)
Q Consensus 586 V~~g~v~GI~VylIdp~~p~~fF~r------~~iYg------~~dd~~Rf~~FsravLe~L~q~g-----------~qPD 642 (904)
++....+|+++|||+++. ||.+ +.+|+ +.|+..||.+|++++++.+..++ ..||
T Consensus 79 ~~~~~~~gv~~y~id~~~---~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~dd 155 (536)
T 3vue_A 79 FFHCYKRGVDRVFIDHPS---FLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDV 155 (536)
T ss_dssp EEECEETTEEEEEEECTT---TTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCE
T ss_pred EEEEEECCCEEEEECCHH---HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCE
T ss_conf 999997895599964755---41233466778666887567664179999999999999999730265301101479987
Q ss_pred EEEECCCCHHHHHHHHHHHHCCC-CCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCC---CCCCCCCCCHHHH
Q ss_conf 99986881546999999863657-9999809999518866688882456421995111378653---3566422111156
Q 002589 643 IIHCHDWQTAFVAPLYWDLYVPK-GLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDR---MQDNSAHDRINPL 718 (904)
Q Consensus 643 IIH~HdW~talVapLl~~~ya~~-gl~~iPIV~TIHnl~yqG~~p~~~L~~~GL~~~~l~~~dr---Lqd~~~~~~in~l 718 (904)
|+|||||++++++.+++..+... .+.++|+|+|+||+.++|.++...+...+++...+...+. .........+|++
T Consensus 156 IiH~hDW~t~l~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ 235 (536)
T 3vue_A 156 VFVCNDWHTGPLASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWM 235 (536)
T ss_dssp EEEEESGGGSTHHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCCHHHHHHCCCCCCCCCCHHHH
T ss_conf 99977604899999999864023320256345421574224555533364418965640103333114641003304399
Q ss_pred HHHHHHCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCC-CCCCHHHHHHH
Q ss_conf 57844247899819878999985107887533223578809999468348988998620122104634-31102442899
Q 002589 719 KGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNAN-DLQGKAENKES 797 (904)
Q Consensus 719 K~ai~~AD~VItVS~syakeIl~~~~g~GL~~~L~~~k~Ki~VIpNGIDtd~f~Patd~~L~~~ysa~-dl~gK~~~K~a 797 (904)
+.++.+||+|+|||++|++++.+. ++.|+.........++.+|+||||++.|+|.+|+.++.+|... .+.+|..+|..
T Consensus 236 k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~ 314 (536)
T 3vue_A 236 KAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEA 314 (536)
T ss_dssp HHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHH
T ss_pred HHHHHHCCEEEECCHHHHHHHHCC-CCCCCCCCCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 999985367787687885343126-3445220012545781899799664214887762100144434555656777999
Q ss_pred HHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC---CCH------------------
Q ss_conf 99980999789999699999346676699999999998110793999991699546---218------------------
Q 002589 798 IRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPVPH---IQV------------------ 856 (904)
Q Consensus 798 Lrq~LGL~~~d~~~plIlfVGRL~~qKGIdlLLeAiarLle~~vqLVIVGsGp~~~---lq~------------------ 856 (904)
+++.+|++. +++.|+|+||||++++||+++|++|+.++.+.+.+++|+|.|+... ++.
T Consensus 315 l~~~~gl~~-d~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 393 (536)
T 3vue_A 315 LQAEAGLPV-DRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAP 393 (536)
T ss_dssp HHHHTTSCC-CTTSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHH
T ss_pred HHHHCCCCC-CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 998619987-9997589999653023784789999997685498599995467268999999876168854999714688
Q ss_pred --HHHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCCC
Q ss_conf --99997648278868978771899998269961126
Q 002589 857 --YPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNN 891 (904)
Q Consensus 857 --e~LyAaADIfVvPSl~EPfGLt~LEAMa~g~~V~~ 891 (904)
..+|++||+||+||++||||++++|||++|+||+.
T Consensus 394 ~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~G~PvI~ 430 (536)
T 3vue_A 394 LAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCAC 430 (536)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCCEEE
T ss_conf 8999998623425346568988899999986998999
No 2
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=1.00 E-value=1 Score=321.27 Aligned_cols=363 Identities=28% Similarity=0.456 Sum_probs=255.9
Q ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEE
Q ss_conf 76799828568876779189999999999997899299996289987522223333221011002478410120354100
Q 002589 512 LHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTI 591 (904)
Q Consensus 512 MkILhIt~E~~P~akvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~~~~i~~L~~i~v~v~syfdG~~~~~~V~~g~v 591 (904)
|||++|+.+++|....||+++++..|+++|.++||+|+|+++.++..... ...+..+. +.... .|. ...+.....
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~-~~~~~~~~-~~~~~-~~~--~~~~~~~~~ 75 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAA-VTDPVKCF-EFTDL-LGE--KADLLEVQH 75 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHH-CCSCEEEE-EESCS-SSC--CEEEEEEEE
T ss_pred CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC-CCCCCEEE-EEEEE-CCC--EEEEEEEEE
T ss_conf 96999944651565665499999999999997698699991564433444-35651368-99983-087--478999996
Q ss_pred CCEEEEEECCCCCCCCCCCC-CCCC------CCCCHHHHHHHHHHHHHHHHHH--CCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 89019981899998654468-7778------8860355789999999999970--9996099986881546999999863
Q 002589 592 EGLPVYFIEPHHPDKFFWRG-QFYG------EHDDFRRFSFFSRAALELLLQA--GKQPDIIHCHDWQTAFVAPLYWDLY 662 (904)
Q Consensus 592 ~GI~VylIdp~~p~~fF~r~-~iYg------~~dd~~Rf~~FsravLe~L~q~--g~qPDIIH~HdW~talVapLl~~~y 662 (904)
.|+++++++.. .++.++ .+|+ +.++..++.+|++++..+++.. ..+|||||+|+|.+++++ .+....
T Consensus 76 ~gv~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~-~~~~~~ 151 (485)
T 1rzu_A 76 ERLDLLILDAP---AYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTP-VYMRYA 151 (485)
T ss_dssp TTEEEEEEECH---HHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHH-HHHHHS
T ss_pred CCCEEEEEECH---HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHH-HHHHHC
T ss_conf 69569998486---77277766558865666530679999999999999998615799988996463055789-997310
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHH
Q ss_conf 65799998099995188666888824564219951113786533566422111156578442478998198789999851
Q 002589 663 VPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTS 742 (904)
Q Consensus 663 a~~gl~~iPIV~TIHnl~yqG~~p~~~L~~~GL~~~~l~~~drLqd~~~~~~in~lK~ai~~AD~VItVS~syakeIl~~ 742 (904)
. ..++|+|+|+|+..+.+.++...+...|++...+. ++.+. ......+++.++..+|.++++|+.+++.+...
T Consensus 152 ~---~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 224 (485)
T 1rzu_A 152 E---TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFG-MEGIE---YYNDVSFLKGGLQTATALSTVSPSYAEEILTA 224 (485)
T ss_dssp S---SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSS-TTTTE---ETTEEEHHHHHHHHCSEEEESCHHHHHHTTSH
T ss_pred C---CCCCCEEEEECCCCCCCCCCHHHHHHCCCCHHHCC-CCCCC---CCCCCCHHHHHHHHCCEEEECCHHHHHHHHCC
T ss_conf 3---58997899966754468788778734399803202-00013---25623599988864677996087589998354
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
Q ss_conf 07887533223578809999468348988998620122104634311024428999998099978999969999934667
Q 002589 743 EGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVP 822 (904)
Q Consensus 743 ~~g~GL~~~L~~~k~Ki~VIpNGIDtd~f~Patd~~L~~~ysa~dl~gK~~~K~aLrq~LGL~~~d~~~plIlfVGRL~~ 822 (904)
++|.|+...+...+.++.+||||+|.+.|.|..+..++.+|..+++.++..++..+++.+|++. ...++|+|+||+.+
T Consensus 225 ~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~--~~~~~i~~vGrl~~ 302 (485)
T 1rzu_A 225 EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDD--DGSPLFCVISRLTW 302 (485)
T ss_dssp HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCC--SSSCEEEEESCBST
T ss_pred CCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC--CCCEEEEEECCCCC
T ss_conf 3576658999860688169708986020588665110001243244567886999999629888--99839999725753
Q ss_pred CCCHHHHHHHHHHHHCCCCEEEEEECCCCC---CCC-----------------H---HHHHHHCCEEEECCCCCCCHHHH
Q ss_conf 669999999999811079399999169954---621-----------------8---99997648278868978771899
Q 002589 823 QKGVHLIRHAIYRTLELGGQFILLGSSPVP---HIQ-----------------V---YPILLSSFSFLRKHIFNICNLYI 879 (904)
Q Consensus 823 qKGIdlLLeAiarLle~~vqLVIVGsGp~~---~lq-----------------~---e~LyAaADIfVvPSl~EPfGLt~ 879 (904)
+||++.+++|+..+.+.+++|+|+|+|+.. .++ . ..+|+.||+||+||.+|+||+++
T Consensus 303 ~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~~~~~ 382 (485)
T 1rzu_A 303 QKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQ 382 (485)
T ss_dssp TTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCSHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCHHH
T ss_conf 12879999999998726956999968946899999999986788689943899799999985299999784468877799
Q ss_pred HHHCCCCCCCCCC
Q ss_conf 9982699611269
Q 002589 880 KLGQGGDLTVNNN 892 (904)
Q Consensus 880 LEAMa~g~~V~~~ 892 (904)
+|||++|+||+.-
T Consensus 383 lEAma~G~PvI~s 395 (485)
T 1rzu_A 383 LYALRYGCIPVVA 395 (485)
T ss_dssp HHHHHHTCEEEEE
T ss_pred HHHHHCCCCEEEE
T ss_conf 9999779977980
No 3
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=1.00 E-value=1 Score=318.29 Aligned_cols=362 Identities=28% Similarity=0.480 Sum_probs=251.0
Q ss_pred CEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEE
Q ss_conf 76799828568876779189999999999997899299996289987522223333221011002478410120354100
Q 002589 512 LHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTI 591 (904)
Q Consensus 512 MkILhIt~E~~P~akvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~~~~i~~L~~i~v~v~syfdG~~~~~~V~~g~v 591 (904)
|||++++.+++|....||+++++..|+++|.++||+|+|+++.++..... ......... .. .+++ ...+.....
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~-~~~~~~~~~-~~-~~~~---~~~~~~~~~ 74 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRG-VTDAQVVSR-RD-TFAG---HITLLFGHY 74 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHH-CTTCEEEEE-EC-CTTC---CEEEEEEEE
T ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC-CCCCEEEEE-EC-CCCC---CEEEEEEEE
T ss_conf 96999964104665677399999999999997498789994476434543-456405787-41-5687---179999987
Q ss_pred CCEEEEEECCCCCCCCCCCCC-CCC------CCCCHHHHHHHHHHHHHHHHHHC--CCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 890199818999986544687-778------88603557899999999999709--996099986881546999999863
Q 002589 592 EGLPVYFIEPHHPDKFFWRGQ-FYG------EHDDFRRFSFFSRAALELLLQAG--KQPDIIHCHDWQTAFVAPLYWDLY 662 (904)
Q Consensus 592 ~GI~VylIdp~~p~~fF~r~~-iYg------~~dd~~Rf~~FsravLe~L~q~g--~qPDIIH~HdW~talVapLl~~~y 662 (904)
+|+++++++.. .++.+.. +|+ +.++..++.+|.+.+..+++... .+|||||+|+|.+++++ .+...
T Consensus 75 ~gv~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~-~~~~~- 149 (485)
T 2qzs_A 75 NGVGIYLIDAP---HLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAP-AYLAA- 149 (485)
T ss_dssp TTEEEEEEECH---HHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHH-HHHHH-
T ss_pred CCCEEEEEECH---HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHH-HHHHH-
T ss_conf 89479997082---65068987667754577873589999999999999998456789978996062133789-99754-
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHH
Q ss_conf 65799998099995188666888824564219951113786533566422111156578442478998198789999851
Q 002589 663 VPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTS 742 (904)
Q Consensus 663 a~~gl~~iPIV~TIHnl~yqG~~p~~~L~~~GL~~~~l~~~drLqd~~~~~~in~lK~ai~~AD~VItVS~syakeIl~~ 742 (904)
. ..++|+|+|+|+..+.+.++...+..+|++...+. ..... +.....+++.++..+|.++++|+.+++.+...
T Consensus 150 ~---~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 222 (485)
T 2qzs_A 150 R---GRPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFN-IHGLE---FNGQISFLKAGLYYADHITAVSPTYAREITEP 222 (485)
T ss_dssp T---TCSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCS-TTTTE---ETTEEEHHHHHHHHCSEEEESSHHHHHHTTSH
T ss_pred C---CCCCCEEEEECCCCCCCCCCHHHHHHCCCCCHHCC-CCCCC---CCCCCCHHHHHHHHCCEEEECCHHHHHHHHCC
T ss_conf 3---68997899946841357889888876499913213-11123---24654699999875386885688999998540
Q ss_pred CCCCCCCCCCCCCC--CEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 07887533223578--8099994683489889986201221046343110244289999980999789999699999346
Q 002589 743 EGGQGLHSTLNFHS--KKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRL 820 (904)
Q Consensus 743 ~~g~GL~~~L~~~k--~Ki~VIpNGIDtd~f~Patd~~L~~~ysa~dl~gK~~~K~aLrq~LGL~~~d~~~plIlfVGRL 820 (904)
.++.++...+..++ .++.+||||+|.+.|.|..++.++.+|+.+++.++..++..+++++|++. +++.++|+|+||+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~~i~~vGrl 301 (485)
T 2qzs_A 223 QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKV-DDKVPLFAVVSRL 301 (485)
T ss_dssp HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCC-CTTSCEEEEEEEE
T ss_pred CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCEEEEEECCC
T ss_conf 147246899985066786699746987664586444222123663006577884999998719888-9997399996667
Q ss_pred CCCCCHHHHHHHHHHHHCCCCEEEEEECCCCC---CCC-----------------H---HHHHHHCCEEEECCCCCCCHH
Q ss_conf 67669999999999811079399999169954---621-----------------8---999976482788689787718
Q 002589 821 VPQKGVHLIRHAIYRTLELGGQFILLGSSPVP---HIQ-----------------V---YPILLSSFSFLRKHIFNICNL 877 (904)
Q Consensus 821 ~~qKGIdlLLeAiarLle~~vqLVIVGsGp~~---~lq-----------------~---e~LyAaADIfVvPSl~EPfGL 877 (904)
.++||++.+++|+..+.+.+++|+|+|+|+.. .++ . ..+|++||+||+||.+|+||+
T Consensus 302 ~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~v~pS~~E~~g~ 381 (485)
T 2qzs_A 302 TSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGL 381 (485)
T ss_dssp SGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHCSEEEECCSCCSSCS
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCEEEECCCCCCCCH
T ss_conf 54358799999999986279489999289567899999999757993899478997999999975889997885678767
Q ss_pred HHHHHCCCCCCCCCC
Q ss_conf 999982699611269
Q 002589 878 YIKLGQGGDLTVNNN 892 (904)
Q Consensus 878 t~LEAMa~g~~V~~~ 892 (904)
+++|||++|+||+.-
T Consensus 382 ~~lEAma~G~PvI~s 396 (485)
T 2qzs_A 382 TQLYGLKYGTLPLVR 396 (485)
T ss_dssp HHHHHHHHTCEEEEE
T ss_pred HHHHHHHCCCCEEEC
T ss_conf 999999779977987
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=1.00 E-value=1 Score=292.63 Aligned_cols=331 Identities=26% Similarity=0.321 Sum_probs=242.5
Q ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEE
Q ss_conf 98767998285688767791899999999999978992999962899875222233332210110024784101203541
Q 002589 510 SGLHVIHIAAEMAPVAKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVS 589 (904)
Q Consensus 510 ~~MkILhIt~E~~P~akvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~~~~i~~L~~i~v~v~syfdG~~~~~~V~~g 589 (904)
++|||++++.+++| ...||+++++..|+++|+++||+|+|++|.++.........+. + + +.....+++..
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~---~-----~-~~~~~~~~~~~ 70 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIR---V-----F-GEEVQVKVSYE 70 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEE---E-----T-TEEEEEEEEEE
T ss_pred CCEEEEEEECCCCC-CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCC---C-----C-CCCCCEEEEEC
T ss_conf 95289999502177-6668899999999999997798599983677882365524630---1-----4-76531024312
Q ss_pred EECCEEEEEECCCCCCCCCCCCCCCC-CCCC-HHHHHHHHHHHHHHHHHH---CCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf 00890199818999986544687778-8860-355789999999999970---999609998688154699999986365
Q 002589 590 TIEGLPVYFIEPHHPDKFFWRGQFYG-EHDD-FRRFSFFSRAALELLLQA---GKQPDIIHCHDWQTAFVAPLYWDLYVP 664 (904)
Q Consensus 590 ~v~GI~VylIdp~~p~~fF~r~~iYg-~~dd-~~Rf~~FsravLe~L~q~---g~qPDIIH~HdW~talVapLl~~~ya~ 664 (904)
..+|++++.++. .+|.+..+|+ +.++ ..++..|++.+..++.+. ..+|||||+|+|..++++.+ ...
T Consensus 71 ~~~gv~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~-~~~--- 142 (439)
T 3fro_A 71 ERGNLRIYRIGG----GLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGAL-IKK--- 142 (439)
T ss_dssp EETTEEEEEEES----GGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHH-HHH---
T ss_pred CCCCCEEEEECC----HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH-HHH---
T ss_conf 578840899353----220521246677630023257899999999999744479981999464034345898-865---
Q ss_pred CCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHCC
Q ss_conf 79999809999518866688882456421995111378653356642211115657844247899819878999985107
Q 002589 665 KGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEG 744 (904)
Q Consensus 665 ~gl~~iPIV~TIHnl~yqG~~p~~~L~~~GL~~~~l~~~drLqd~~~~~~in~lK~ai~~AD~VItVS~syakeIl~~~~ 744 (904)
..++|+|+|+|+....+ .+.......++.. ........+.+..+..+|.++++|+.+++....
T Consensus 143 --~~~~~~v~~~h~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~--- 205 (439)
T 3fro_A 143 --YFKIPAVFTIHRLNKSK-LPAFYFHEAGLSE-----------LAPYPDIDPEHTGGYIADIVTTVSRGYLIDEWG--- 205 (439)
T ss_dssp --HHCCCEEEEESCCCCCC-EEHHHHHHTTCGG-----------GCCSSEECHHHHHHHHCSEEEESCHHHHHHTHH---
T ss_pred --CCCCCEEEEECCCCCCC-CCHHHHCCCCCCC-----------CCCCCEEEHHHHHHHHCCEEEECCHHHHHHHHH---
T ss_conf --26997899965344456-8567747455100-----------356663207666554345887268989999860---
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCC-CC
Q ss_conf 88753322357880999946834898899862012210463431102442899999809997899996999993466-76
Q 002589 745 GQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLV-PQ 823 (904)
Q Consensus 745 g~GL~~~L~~~k~Ki~VIpNGIDtd~f~Patd~~L~~~ysa~dl~gK~~~K~aLrq~LGL~~~d~~~plIlfVGRL~-~q 823 (904)
.+.....++.+||||+|.+.|.|...+ ..+...+..+++.+|++. + ++|+|+||+. +.
T Consensus 206 ------~~~~~~~~i~vi~ngvd~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~---~-~~i~~~G~~~~~~ 264 (439)
T 3fro_A 206 ------FFRNFEGKITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMDE---G-VTFMFIGRFDRGQ 264 (439)
T ss_dssp ------HHGGGTTSEEECCCCCCTTTSCGGGSC-----------SCHHHHHHHHHHHHTCCS---C-EEEEEECCSSCTT
T ss_pred ------HHHHCCCCEEECCCCCCCHHCCCCCCC-----------CHHHHHHHHHHHHCCCCC---C-CEEEEECCCCCCC
T ss_conf ------565047734534788880430843221-----------104566999999739999---8-4799973335343
Q ss_pred CCHHHHHHHHHHHHC----CCCEEEEEECCCCC--C-CC-----------------H---HHHHHHCCEEEECCCCCCCH
Q ss_conf 699999999998110----79399999169954--6-21-----------------8---99997648278868978771
Q 002589 824 KGVHLIRHAIYRTLE----LGGQFILLGSSPVP--H-IQ-----------------V---YPILLSSFSFLRKHIFNICN 876 (904)
Q Consensus 824 KGIdlLLeAiarLle----~~vqLVIVGsGp~~--~-lq-----------------~---e~LyAaADIfVvPSl~EPfG 876 (904)
||++.+++|+..+.. .+++|+|+|+|+.. . ++ . ..+|+.||++|+||.+|+||
T Consensus 265 Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~ 344 (439)
T 3fro_A 265 KGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFG 344 (439)
T ss_dssp BCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSCCSSC
T ss_pred CCHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCEEEECCCCCCCC
T ss_conf 66999999999998546678718999807972677899998750698999728799889999999779999589878861
Q ss_pred HHHHHHCCCCCCCCCCCCCC
Q ss_conf 89999826996112699864
Q 002589 877 LYIKLGQGGDLTVNNNCEPW 896 (904)
Q Consensus 877 Lt~LEAMa~g~~V~~~~~~~ 896 (904)
++.+|||++|+||+....|-
T Consensus 345 ~~~~EAma~G~Pvi~s~~~~ 364 (439)
T 3fro_A 345 LVALEAMCLGAIPIASAVGG 364 (439)
T ss_dssp HHHHHHHHTTCEEEEESSTH
T ss_pred HHHHHHHHCCCCEEECCCCC
T ss_conf 89999997799769737887
No 5
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=1.00 E-value=1 Score=283.66 Aligned_cols=346 Identities=15% Similarity=0.081 Sum_probs=225.5
Q ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCCCCCCCCCCEE---------EECCCCCCCC
Q ss_conf 6799828568876779189999999999997-89929999628998752222333322101---------1002478410
Q 002589 513 HVIHIAAEMAPVAKVGGLGDVVAGLGKALQK-KGHLVEIVLPKYDCMQYDRIDDLRALDVV---------VESYFDGRLF 582 (904)
Q Consensus 513 kILhIt~E~~P~akvGGLg~vV~~LakALqk-kGHeV~VItPkY~~l~~~~i~~L~~i~v~---------v~syfdG~~~ 582 (904)
-+.-+++|..- +|||+-+++..-++.+++ .|-....|.|........++..+..-+.. ..+.-.-...
T Consensus 29 ~lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (725)
T 3nb0_A 29 LLFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESR 106 (725)
T ss_dssp EEEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTT
T ss_pred EEEEEEHHHHC--CCCCEEEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHC
T ss_conf 57762534421--5577678873343678998689279988888776786135568888033200047999999999978
Q ss_pred CCEEEEEE--ECCEE-EEEECCCCCCCCCCC----------------CCCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCC
Q ss_conf 12035410--08901-998189999865446----------------8777888603557899999999999709-9960
Q 002589 583 KNKVWVST--IEGLP-VYFIEPHHPDKFFWR----------------GQFYGEHDDFRRFSFFSRAALELLLQAG-KQPD 642 (904)
Q Consensus 583 ~~~V~~g~--v~GI~-VylIdp~~p~~fF~r----------------~~iYg~~dd~~Rf~~FsravLe~L~q~g-~qPD 642 (904)
+.+|..|+ ++|-| |.+++.. .+++. +..|+..++..+|.||+.++++.+.... +.||
T Consensus 107 G~~v~~GrW~i~G~P~viL~d~~---~~~~~~~~~~~~lw~~~~i~s~~~yg~~dd~~~F~y~~~avl~~l~~~~~~~pd 183 (725)
T 3nb0_A 107 GVHFVYGRWLIEGAPKVILFDLD---SVRGYSNEWKGDLWSLVGIPSPENDFETNDAILLGYTVAWFLGEVAHLDSQHAI 183 (725)
T ss_dssp TCCEEEEEESSTTCCEEEEECSG---GGGGGHHHHHHHHHHHHCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEEEEECCCCCEEEEEECH---HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99189988854998569999670---788889999999999868499876652118999999999999998862789984
Q ss_pred EEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCC---C---CCCCCH-HHHHHCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 99986881546999999863657999980999951886---6---688882-4564219951113786533566422111
Q 002589 643 IIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFE---Y---QGTAPA-KELASCGLDVQQLNRPDRMQDNSAHDRI 715 (904)
Q Consensus 643 IIH~HdW~talVapLl~~~ya~~gl~~iPIV~TIHnl~---y---qG~~p~-~~L~~~GL~~~~l~~~drLqd~~~~~~i 715 (904)
|+|||||+++++ +.+.+.. ..++++|+|+|+.. + ||..+. ..+...+.+.... .+ ..+..+
T Consensus 184 IiH~HDW~tg~~-~~~Lk~~----~~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~----~~---~i~~~~ 251 (725)
T 3nb0_A 184 VAHFHEWLAGVA-LPLCRKR----RIDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAG----RF---GIYHRY 251 (725)
T ss_dssp EEEEESGGGCTH-HHHHHHT----TCSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHH----HT---TCHHHH
T ss_pred EEEECCHHHHHH-HHHHHHH----CCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHCCCCHHHH----HH---CHHHHH
T ss_conf 799473666289-9999975----78998999970164666565248973544355508973444----31---106888
Q ss_pred HHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHH
Q ss_conf 15657844247899819878999985107887533223578809999468348988998620122104634311024428
Q 002589 716 NPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENK 795 (904)
Q Consensus 716 n~lK~ai~~AD~VItVS~syakeIl~~~~g~GL~~~L~~~k~Ki~VIpNGIDtd~f~Patd~~L~~~ysa~dl~gK~~~K 795 (904)
+++|.++.+||.|+|||+.|++++.. .++ .+.+.+ ||||||++.|+|... ....|..+|
T Consensus 252 ~~EKaga~~AD~ITTVS~~yA~Ei~~-Ll~--------r~~d~i--IpNGID~~~f~p~~~----------~~~~k~~aK 310 (725)
T 3nb0_A 252 CIERAAAHSADVFTTVSQITAFEAEH-LLK--------RKPDGI--LPNGLNVIKFQAFHE----------FQNLHALKK 310 (725)
T ss_dssp HHHHHHHHHSSEEEESSHHHHHHHHH-HTS--------SCCSEE--CCCCBCCCCCSSTTH----------HHHHHHHHH
T ss_pred HHHHHHHHHCCEEEECCHHHHHHHHH-HHC--------CCCCEE--ECCCCCCCCCCCCHH----------HHHHHHHHH
T ss_conf 99999997489999899899999999-966--------999879--758810354584135----------677799999
Q ss_pred HHHHHHC------CCCCCCCCCCEEEEEECCC-CCCCHHHHHHHHHHHHCC---------CCEEEEEECCC---------
Q ss_conf 9999980------9997899996999993466-766999999999981107---------93999991699---------
Q 002589 796 ESIRKHL------GLSSADARKPLVGCITRLV-PQKGVHLIRHAIYRTLEL---------GGQFILLGSSP--------- 850 (904)
Q Consensus 796 ~aLrq~L------GL~~~d~~~plIlfVGRL~-~qKGIdlLLeAiarLle~---------~vqLVIVGsGp--------- 850 (904)
+.+++.+ |++...++.++|+.+||++ .+||++++++|+.++... -+.|+|+..+.
T Consensus 311 ~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~ 390 (725)
T 3nb0_A 311 EKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALK 390 (725)
T ss_dssp HHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHC
T ss_conf 99999987630467788977604999999832344887999999999999876346898379999937877887666631
Q ss_pred --------------------------------------CC-CC------------C------------------------
Q ss_conf --------------------------------------54-62------------1------------------------
Q 002589 851 --------------------------------------VP-HI------------Q------------------------ 855 (904)
Q Consensus 851 --------------------------------------~~-~l------------q------------------------ 855 (904)
.+ +. +
T Consensus 391 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~ 470 (725)
T 3nb0_A 391 GQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDD 470 (725)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTG
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
T ss_conf 13589999989999999876889999740534455777898988863967778888887764047788997366603557
Q ss_pred ---------HH--------------------------------HHHHHCCEEEECCCCCCCHHHHHHHCCCCCCCCC-CC
Q ss_conf ---------89--------------------------------9997648278868978771899998269961126-99
Q 002589 856 ---------VY--------------------------------PILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNN-NC 893 (904)
Q Consensus 856 ---------~e--------------------------------~LyAaADIfVvPSl~EPfGLt~LEAMa~g~~V~~-~~ 893 (904)
++ .+|++||+||+||.+||||++++|||++|+||+. ++
T Consensus 471 ~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~PvI~s~~ 550 (725)
T 3nb0_A 471 ANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNV 550 (725)
T ss_dssp GGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTCCEEEETT
T ss_pred CCCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHCCCCEEEECC
T ss_conf 75489999986487777677454999333147888641027899986465999656657887899999981998899279
Q ss_pred CCC
Q ss_conf 864
Q 002589 894 EPW 896 (904)
Q Consensus 894 ~~~ 896 (904)
.|+
T Consensus 551 gG~ 553 (725)
T 3nb0_A 551 SGF 553 (725)
T ss_dssp BHH
T ss_pred CCH
T ss_conf 970
No 6
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=1.00 E-value=1 Score=263.59 Aligned_cols=360 Identities=15% Similarity=0.155 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC---------CCCCCCCHHHHHHH--------HHHHHHHCCCE
Q ss_conf 37765332245687553126889999876799828568---------87677918999999--------99999978992
Q 002589 485 YMECKEKNEHEAISTFLKLTSSSISSGLHVIHIAAEMA---------PVAKVGGLGDVVAG--------LGKALQKKGHL 547 (904)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~MkILhIt~E~~---------P~akvGGLg~vV~~--------LakALqkkGHe 547 (904)
..++-+..|...+.+|.+.... .|+|++|+...+ | .+||..+||.+ |+++|.++||+
T Consensus 256 ~~~~~~~p~~~~~~~~~~~~~~----~~~i~~is~hg~~~~~~~lG~~--dtGGq~vyV~e~~~al~~ela~~L~~~G~~ 329 (816)
T 3s28_A 256 LLDLLEAPDPCTLETFLGRVPM----VFNVVILSPHGYFAQDNVLGYP--DTGGQVVYILDQVRALEIEMLQRIKQQGLN 329 (816)
T ss_dssp HHHHHHSCCHHHHHHHHHHSCC----CCEEEEECCSSCCCSSSCTTST--TCSHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHCCCCCCCHHHHHCCCCC----EEEEEEECCCCCCCCCCCCCCC--CCCCCEEEHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9998519996307777365885----2489998477665754457888--889836509989989999999999977996
Q ss_pred EE----EEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEEEECCEEEEEECCCCCC-----CCCCCCCCCCCCC
Q ss_conf 99----99628998752222333322101100247841012035410089019981899998-----6544687778886
Q 002589 548 VE----IVLPKYDCMQYDRIDDLRALDVVVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPD-----KFFWRGQFYGEHD 618 (904)
Q Consensus 548 V~----VItPkY~~l~~~~i~~L~~i~v~v~syfdG~~~~~~V~~g~v~GI~VylIdp~~p~-----~fF~r~~iYg~~d 618 (904)
|+ |+|...+... + . . |.... -.....+|+.++.++.. |. .|+.+..++++
T Consensus 330 V~~~V~v~Tr~~~~~~-g----~-~--------y~~~~----e~i~~~~gv~I~RvP~~-~~~g~l~~~l~k~~L~~~-- 388 (816)
T 3s28_A 330 IKPRILILTRLLPDAV-G----T-T--------CGERL----ERVYDSEYCDILRVPFR-TEKGIVRKWISRFEVWPY-- 388 (816)
T ss_dssp CCCEEEEEEECCTTCT-T----S-S--------TTSSE----EECTTCSSEEEEEECEE-ETTEEECSCCCTTTCGGG--
T ss_pred CCEEEEEEECCCCCCC-C----C-C--------CCCCC----EEECCCCCEEEEEECCC-CCCCCCCCCCCHHHHHHH--
T ss_conf 2001689968987877-7----7-6--------57751----15548697599996687-766543345657788999--
Q ss_pred CHHHHHHHH-HHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCC
Q ss_conf 035578999-9999999970999609998688154699999986365799998099995188666888824564219951
Q 002589 619 DFRRFSFFS-RAALELLLQAGKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDV 697 (904)
Q Consensus 619 d~~Rf~~Fs-ravLe~L~q~g~qPDIIH~HdW~talVapLl~~~ya~~gl~~iPIV~TIHnl~yqG~~p~~~L~~~GL~~ 697 (904)
...|. .++..++...+.+|||||+|.|.+++++.++... .++|+|+|+|++....... .+...
T Consensus 389 ----L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~------~gvP~V~T~Hsl~~~k~~~------~~~~~ 452 (816)
T 3s28_A 389 ----LETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHK------LGVTQCTIAHALEKTKYPD------SDIYW 452 (816)
T ss_dssp ----HHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHH------HTCCEEEECSCCHHHHSTT------TTTTH
T ss_pred ----HHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH------CCCCEEEEEECCCCCCCCC------CCCHH
T ss_conf ----9999999999999965899739996885389999999997------5998899981663001222------33015
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCC------CCC------CCCCCCEEEEEECC
Q ss_conf 113786533566422111156578442478998198789999851078875------332------23578809999468
Q 002589 698 QQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGL------HST------LNFHSKKFVGILNG 765 (904)
Q Consensus 698 ~~l~~~drLqd~~~~~~in~lK~ai~~AD~VItVS~syakeIl~~~~g~GL------~~~------L~~~k~Ki~VIpNG 765 (904)
..+. ..+.+..++...+.++..||.|+++|+..++.+......++. ..+ +.....|+.+||||
T Consensus 453 ~~~~-----~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~~~ki~VIpnG 527 (816)
T 3s28_A 453 KKLD-----DKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPG 527 (816)
T ss_dssp HHHH-----HHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTTCTTEEECCCC
T ss_pred HHHH-----HHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEECCC
T ss_conf 5677-----88889888889999998499999888999999998887764420135411221012244677887998897
Q ss_pred CCCCCCCCCCCCH--HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHC--CCC
Q ss_conf 3489889986201--221046343110244289999980999789999699999346676699999999998110--793
Q 002589 766 IDTDAWNPATDTF--LKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLIRHAIYRTLE--LGG 841 (904)
Q Consensus 766 IDtd~f~Patd~~--L~~~ysa~dl~gK~~~K~aLrq~LGL~~~d~~~plIlfVGRL~~qKGIdlLLeAiarLle--~~v 841 (904)
+|.+.|.|..+.. +...+.. +.....++...++.+|+.. +++.++|+|+||+.+.||++.+++|+.++.+ .++
T Consensus 528 VD~~~F~P~~~~~~Rl~~~~~~--i~~~l~~p~~~r~~lg~l~-~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v 604 (816)
T 3s28_A 528 ADMSIYFPYTEEKRRLTKFHSE--IEELLYSDVENKEHLCVLK-DKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELA 604 (816)
T ss_dssp CCTTTSCCTTCTTTCCGGGHHH--HHHHHHCSCCBTTEESCBS-CTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC
T ss_pred CCHHHCCCCCHHHHHHHHCCCC--CCCCCCCHHHHHHHHCCCC-CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCE
T ss_conf 4788728631035543200232--0001246056777744457-899839999744722179999999999978557996
Q ss_pred EEEEEECCCC-----------C-CCC--------------------H---H---HHHH-HCCEEEECCCCCCCHHHHHHH
Q ss_conf 9999916995-----------4-621--------------------8---9---9997-648278868978771899998
Q 002589 842 QFILLGSSPV-----------P-HIQ--------------------V---Y---PILL-SSFSFLRKHIFNICNLYIKLG 882 (904)
Q Consensus 842 qLVIVGsGp~-----------~-~lq--------------------~---e---~LyA-aADIfVvPSl~EPfGLt~LEA 882 (904)
+|+|+|+|+. . .++ . . .+|+ ++|+||+||.+|+||++++||
T Consensus 605 ~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEA 684 (816)
T 3s28_A 605 NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEA 684 (816)
T ss_dssp EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHH
T ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHH
T ss_conf 99999688753334335699999999999974998728981675566899999999995690999888755764999999
Q ss_pred CCCCCCCCCCCCC
Q ss_conf 2699611269986
Q 002589 883 QGGDLTVNNNCEP 895 (904)
Q Consensus 883 Ma~g~~V~~~~~~ 895 (904)
|++|+||+.-..|
T Consensus 685 MA~G~PVIasd~G 697 (816)
T 3s28_A 685 MTCGLPTFATCKG 697 (816)
T ss_dssp HHTTCCEEEESSB
T ss_pred HHCCCCEEEECCC
T ss_conf 9809999996898
No 7
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=1.00 E-value=1 Score=249.05 Aligned_cols=323 Identities=16% Similarity=0.147 Sum_probs=203.2
Q ss_pred CCCEEEEECCCCCCCC---------CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCC
Q ss_conf 9876799828568876---------7791899999999999978992999962899875222233332210110024784
Q 002589 510 SGLHVIHIAAEMAPVA---------KVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGR 580 (904)
Q Consensus 510 ~~MkILhIt~E~~P~a---------kvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~~~~i~~L~~i~v~v~syfdG~ 580 (904)
++|||++|+..++|.. ..||+++++..|+++|.++||+|+|+++...... ... |..
T Consensus 6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~------~~~--------~~~- 70 (499)
T 2r60_A 6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDEN------WPE--------FSG- 70 (499)
T ss_dssp -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTT------BGG--------GCC-
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCC------CCC--------HHH-
T ss_conf 45249999657774434423478888799433499999999855984899957887233------651--------135-
Q ss_pred CCCCEEEE-EEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
Q ss_conf 10120354-1008901998189999865446877788860355-789999999999970999609998688154699999
Q 002589 581 LFKNKVWV-STIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRR-FSFFSRAALELLLQAGKQPDIIHCHDWQTAFVAPLY 658 (904)
Q Consensus 581 ~~~~~V~~-g~v~GI~VylIdp~~p~~fF~r~~iYg~~dd~~R-f~~FsravLe~L~q~g~qPDIIH~HdW~talVapLl 658 (904)
.+.. ....|++++.++... ..++... .... +..|...+..++++.+.+|||||+|.+..++++.++
T Consensus 71 ----~~~~~~~~~gv~v~~~~~~~-~~~~~~~-------~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~ 138 (499)
T 2r60_A 71 ----EIDYYQETNKVRIVRIPFGG-DKFLPKE-------ELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLL 138 (499)
T ss_dssp ----SEEECTTCSSEEEEEECCSC-SSCCCGG-------GCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHH
T ss_pred ----HHHHCCCCCCEEEEEECCCC-CCCCCHH-------HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
T ss_conf ----67750678981799825777-6776889-------99998999999999999853899888997578620799998
Q ss_pred HHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHH
Q ss_conf 98636579999809999518866688882456421995111378653356642211115657844247899819878999
Q 002589 659 WDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE 738 (904)
Q Consensus 659 ~~~ya~~gl~~iPIV~TIHnl~yqG~~p~~~L~~~GL~~~~l~~~drLqd~~~~~~in~lK~ai~~AD~VItVS~syake 738 (904)
... .++|+|+|+|+...... ......+.....+. .. ..+.....+.+..+..+|.++++|+..++.
T Consensus 139 ~~~------~~~p~v~~~H~~~~~~~---~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~ 204 (499)
T 2r60_A 139 KNI------KGLPFTFTGHSLGAQKM---EKLNVNTSNFKEMD---ER--FKFHRRIIAERLTMSYADKIIVSTSQERFG 204 (499)
T ss_dssp HHH------HCCCEEEECSSCHHHHH---HTTCCCSTTSHHHH---HH--HCHHHHHHHHHHHHHHCSEEEESSHHHHHH
T ss_pred HHH------CCCCEEEECCCCCCCCC---HHHCCCCCCCCHHH---HH--HHHHHHHHHHHHHHHCCCEEEECCHHHHHH
T ss_conf 873------59968998068400111---34414787761245---56--788899999999984689999888899999
Q ss_pred HHHHC-CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCC-----CCCCCCCCC
Q ss_conf 98510-788753322357880999946834898899862012210463431102442899999809-----997899996
Q 002589 739 VRTSE-GGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLG-----LSSADARKP 812 (904)
Q Consensus 739 Il~~~-~g~GL~~~L~~~k~Ki~VIpNGIDtd~f~Patd~~L~~~ysa~dl~gK~~~K~aLrq~LG-----L~~~d~~~p 812 (904)
+.... ++. +... ....++.+||||+|.+.|.|... ...+..+++.+| ++. +.+
T Consensus 205 ~~~~~~~g~-~~~~--~~~~ki~vi~ngvd~~~~~~~~~---------------~~~~~~~r~~~~~~~~~~~~---~~~ 263 (499)
T 2r60_A 205 QYSHDLYRG-AVNV--EDDDKFSVIPPGVNTRVFDGEYG---------------DKIKAKITKYLERDLGSERM---ELP 263 (499)
T ss_dssp TTTSGGGTT-TCCT--TCGGGEEECCCCBCTTTSSSCCC---------------HHHHHHHHHHHHHHSCGGGT---TSC
T ss_pred HHHHHCCCC-CCCC--CCCCCEEEECCCCCHHHCCCCCH---------------HHHHHHHHHHHCCCCCCCCC---CCC
T ss_conf 986412464-2234--67887699879958665686410---------------35678999883643345688---876
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHCC---CCEEEEEEC--CC--------------CCCCCH-----------------
Q ss_conf 999993466766999999999981107---939999916--99--------------546218-----------------
Q 002589 813 LVGCITRLVPQKGVHLIRHAIYRTLEL---GGQFILLGS--SP--------------VPHIQV----------------- 856 (904)
Q Consensus 813 lIlfVGRL~~qKGIdlLLeAiarLle~---~vqLVIVGs--Gp--------------~~~lq~----------------- 856 (904)
+|+|+||+.++||++.+++|+..+.+. ...++|+|+ |+ ...++.
T Consensus 264 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v 343 (499)
T 2r60_A 264 AIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLN 343 (499)
T ss_dssp EEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTTCBTTEEEEECC
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 89996068501588999999999987388865999987888753221111320147999999999864998609987889
Q ss_pred -----HHHHHHC----CEEEECCCCCCCHHHHHHHCCCCCCCCCCCC
Q ss_conf -----9999764----8278868978771899998269961126998
Q 002589 857 -----YPILLSS----FSFLRKHIFNICNLYIKLGQGGDLTVNNNCE 894 (904)
Q Consensus 857 -----e~LyAaA----DIfVvPSl~EPfGLt~LEAMa~g~~V~~~~~ 894 (904)
..+|+.| |++|+||.+|+||++.+|||++|+||+.-..
T Consensus 344 ~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~ 390 (499)
T 2r60_A 344 SQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRN 390 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESS
T ss_pred CHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHCCCCEEEECC
T ss_conf 98999999995576798899786458979689999976998898168
No 8
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=1.00 E-value=1 Score=243.03 Aligned_cols=306 Identities=17% Similarity=0.186 Sum_probs=204.1
Q ss_pred CCCCCCEEEEECCCCCCCC-----CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCC
Q ss_conf 9999876799828568876-----77918999999999999789929999628998752222333322101100247841
Q 002589 507 SISSGLHVIHIAAEMAPVA-----KVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRIDDLRALDVVVESYFDGRL 581 (904)
Q Consensus 507 ~~~~~MkILhIt~E~~P~a-----kvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~~~~i~~L~~i~v~v~syfdG~~ 581 (904)
...++|||++++..++|.. ..||++.++..|+++|.++||+|+|+++........
T Consensus 16 ~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-------------------- 75 (438)
T 3c48_A 16 PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE-------------------- 75 (438)
T ss_dssp ---CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS--------------------
T ss_pred CCCCHHEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC--------------------
T ss_conf 570020334577532563467878878799999999999996699799995478877754--------------------
Q ss_pred CCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-HHHHCCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 0120354100890199818999986544687778886035578999999999-997099960999868815469999998
Q 002589 582 FKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQFYGEHDDFRRFSFFSRAALEL-LLQAGKQPDIIHCHDWQTAFVAPLYWD 660 (904)
Q Consensus 582 ~~~~V~~g~v~GI~VylIdp~~p~~fF~r~~iYg~~dd~~Rf~~FsravLe~-L~q~g~qPDIIH~HdW~talVapLl~~ 660 (904)
.....+|+.++.+.... +. ..+..+-...+..|.+.++.+ +++ ..+|||||+|.|..++++.++..
T Consensus 76 -----~~~~~~~v~v~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~~~~~~~~~~~~~ 142 (438)
T 3c48_A 76 -----IVRVAENLRVINIAAGP---YE----GLSKEELPTQLAAFTGGMLSFTRRE-KVTYDLIHSHYWLSGQVGWLLRD 142 (438)
T ss_dssp -----EEEEETTEEEEEECCSC---SS----SCCGGGGGGGHHHHHHHHHHHHHHH-TCCCSEEEEEHHHHHHHHHHHHH
T ss_pred -----CCCCCCCEEEEEECCCC---CC----CCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECCCCHHHHHHHHHH
T ss_conf -----00256874899924787---54----3236677899999999999999841-68999899477557899999999
Q ss_pred HHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHH
Q ss_conf 63657999980999951886668888245642199511137865335664221111565784424789981987899998
Q 002589 661 LYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVR 740 (904)
Q Consensus 661 ~ya~~gl~~iPIV~TIHnl~yqG~~p~~~L~~~GL~~~~l~~~drLqd~~~~~~in~lK~ai~~AD~VItVS~syakeIl 740 (904)
. .++|+|+|+|+........ +. .+.. .. ......+.+..+..+|.++++|+..++.+.
T Consensus 143 ~------~~~p~v~~~h~~~~~~~~~---~~-~~~~---------~~---~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~ 200 (438)
T 3c48_A 143 L------WRIPLIHTAHTLAAVKNSY---RD-DSDT---------PE---SEARRICEQQLVDNADVLAVNTQEEMQDLM 200 (438)
T ss_dssp H------HTCCEEEECSSCHHHHSCC--------CC---------HH---HHHHHHHHHHHHHHCSEEEESSHHHHHHHH
T ss_pred H------CCCCEEEEECCCCCCCCCC---CC-CCCC---------CC---HHHHHHHHHHHHHCCCEEEECCHHHHHHHH
T ss_conf 7------4999899942774011111---00-2677---------31---578999999998408999984799999999
Q ss_pred HHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECC
Q ss_conf 51078875332235788099994683489889986201221046343110244289999980999789999699999346
Q 002589 741 TSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRL 820 (904)
Q Consensus 741 ~~~~g~GL~~~L~~~k~Ki~VIpNGIDtd~f~Patd~~L~~~ysa~dl~gK~~~K~aLrq~LGL~~~d~~~plIlfVGRL 820 (904)
.. ++ ....++.+||||+|.+.|.+... ..+..+++.+|++. +.++|+|+||+
T Consensus 201 ~~-~g--------~~~~k~~vi~ngvd~~~~~~~~~----------------~~~~~~r~~~~~~~---~~~~i~~~G~~ 252 (438)
T 3c48_A 201 HH-YD--------ADPDRISVVSPGADVELYSPGND----------------RATERSRRELGIPL---HTKVVAFVGRL 252 (438)
T ss_dssp HH-HC--------CCGGGEEECCCCCCTTTSCCC--------------------CHHHHHHTTCCS---SSEEEEEESCB
T ss_pred HH-HC--------CCHHHEEEECCCCCCCCCCCCCC----------------CHHHHHHHHCCCCC---CCCEEEEEEEE
T ss_conf 98-58--------98202688269766110478662----------------02456688608998---98489997431
Q ss_pred CCCCCHHHHHHHHHHHHCC----CCEEEEEEC----CCCCC-CCH----------------------HHHHHHCCEEEEC
Q ss_conf 6766999999999981107----939999916----99546-218----------------------9999764827886
Q 002589 821 VPQKGVHLIRHAIYRTLEL----GGQFILLGS----SPVPH-IQV----------------------YPILLSSFSFLRK 869 (904)
Q Consensus 821 ~~qKGIdlLLeAiarLle~----~vqLVIVGs----Gp~~~-lq~----------------------e~LyAaADIfVvP 869 (904)
.++||++.+++|+..+.+. +++|+|+|+ |+... ++. ..+|+.||++|+|
T Consensus 253 ~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv~v~p 332 (438)
T 3c48_A 253 QPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVP 332 (438)
T ss_dssp SGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCCEEEEC
T ss_conf 56679899999999999639776669999818887772789999999971987868985889858899999858999987
Q ss_pred CCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 89787718999982699611269986
Q 002589 870 HIFNICNLYIKLGQGGDLTVNNNCEP 895 (904)
Q Consensus 870 Sl~EPfGLt~LEAMa~g~~V~~~~~~ 895 (904)
|.+|+||++.+|||++|+||+....|
T Consensus 333 s~~e~~~~~~~Eama~G~PvI~~~~~ 358 (438)
T 3c48_A 333 SFNESFGLVAMEAQASGTPVIAARVG 358 (438)
T ss_dssp CSCCSSCHHHHHHHHTTCCEEEESCT
T ss_pred CCCCCCCHHHHHHHHCCCCEEECCCC
T ss_conf 40268755999998769988962798
No 9
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=1.00 E-value=1 Score=237.63 Aligned_cols=363 Identities=16% Similarity=0.105 Sum_probs=238.4
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC-CCCCCCCCCCCEEEE--CCCCCCCCC-------C-------EEE
Q ss_conf 67791899999999999978992999962899875-222233332210110--024784101-------2-------035
Q 002589 525 AKVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQ-YDRIDDLRALDVVVE--SYFDGRLFK-------N-------KVW 587 (904)
Q Consensus 525 akvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~-~~~i~~L~~i~v~v~--syfdG~~~~-------~-------~V~ 587 (904)
...||+|+......+.++..|....-++..|...- .+.+.+ +..++.. |...|.+++ + .|+
T Consensus 111 LgnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~d--G~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~ 188 (796)
T 2c4m_A 111 LGNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNE--GFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTR 188 (796)
T ss_dssp CCCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEET--TEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEC--CEEEEECCCCCCCCCCEEEECCCCEEEEEECCEEEE
T ss_conf 578708888999999997579986898624158871798258--978861776545799604764772789974998999
Q ss_pred E----EEECC--------EEEEEECCCCCCCC----CCCC-----------------CCCCCCC----CHHHH---HHHH
Q ss_conf 4----10089--------01998189999865----4468-----------------7778886----03557---8999
Q 002589 588 V----STIEG--------LPVYFIEPHHPDKF----FWRG-----------------QFYGEHD----DFRRF---SFFS 627 (904)
Q Consensus 588 ~----g~v~G--------I~VylIdp~~p~~f----F~r~-----------------~iYg~~d----d~~Rf---~~Fs 627 (904)
. -.+.| +.++-..+.. .| |..+ -+|+... ...|. .+|+
T Consensus 189 a~~yd~pi~gy~~~~~n~lrlW~a~~~~--~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~ 266 (796)
T 2c4m_A 189 AIPYDMPITGYGTHNVGTLRLWKAEPWE--EFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFT 266 (796)
T ss_dssp EEEEEEEECCTTCCCCEEEEEEEEEESS--SSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCCCCCEEEEEEEECCCCC--CCCHHHCCCCCHHHHHHCHHHHHCHHHCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 9997246567677735899988605663--24654326765656544627561654337699998540988997599999
Q ss_pred HHHHHH-HHHH-----CC----CCCEEEECCCCHHHHHHHHHHHHC-CCC------C--CCCEEEEEECCCCCCCC--CC
Q ss_conf 999999-9970-----99----960999868815469999998636-579------9--99809999518866688--88
Q 002589 628 RAALEL-LLQA-----GK----QPDIIHCHDWQTAFVAPLYWDLYV-PKG------L--NSARVCFTCHNFEYQGT--AP 686 (904)
Q Consensus 628 ravLe~-L~q~-----g~----qPDIIH~HdW~talVapLl~~~ya-~~g------l--~~iPIV~TIHnl~yqG~--~p 686 (904)
.++++. ++.. .+ +||||||||||++++++-+.+... ..+ + .+..+++|+|+..++|. +|
T Consensus 267 ~a~lq~ilr~~~~~~~~l~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp 346 (796)
T 2c4m_A 267 SASLQAMIQDHLAHHKDLSNFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWD 346 (796)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEE
T ss_pred HHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCHHHHHHHCC
T ss_conf 99999999999870887344599708993897177689999999745417987899998602178885686377764179
Q ss_pred HHHHHH---------CCCCCCCCC----CCC------CCCCCCCCCCHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCC
Q ss_conf 245642---------199511137----865------3356642211115657844247899819878999985107887
Q 002589 687 AKELAS---------CGLDVQQLN----RPD------RMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQG 747 (904)
Q Consensus 687 ~~~L~~---------~GL~~~~l~----~~d------rLqd~~~~~~in~lK~ai~~AD~VItVS~syakeIl~~~~g~G 747 (904)
.+.+.. .+++...+. .++ ++. ......+++.+.++.+|+.|++||+.+++.++++.++
T Consensus 347 ~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~-i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~~f~-- 423 (796)
T 2c4m_A 347 EQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMA-PIQHGTVHMAWIACYAAYSINGVAALHTEIIKAETLA-- 423 (796)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHC-SEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHTTTH--
T ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHCCC-CEECCCCCHHHHHHHHCCCEEECCHHHHHHHHHHHHH--
T ss_conf 9999987579888870768999999984578276653254-1248811699999984283210238778886136666--
Q ss_pred CCCCCCCCCCEEEEEECCCCCCCC----CCCCCCHHHHCCC-----------------CCC-------CCCHHHHHHHH-
Q ss_conf 533223578809999468348988----9986201221046-----------------343-------11024428999-
Q 002589 748 LHSTLNFHSKKFVGILNGIDTDAW----NPATDTFLKVQYN-----------------AND-------LQGKAENKESI- 798 (904)
Q Consensus 748 L~~~L~~~k~Ki~VIpNGIDtd~f----~Patd~~L~~~ys-----------------a~d-------l~gK~~~K~aL- 798 (904)
.++...+.++..|.|||+...| +|..++.+...|. ++| +++|..+|.+|
T Consensus 424 --~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~ 501 (796)
T 2c4m_A 424 --DWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFA 501 (796)
T ss_dssp --HHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf --698728640065618846677500359758899998669212211869999988619988999999999999999999
Q ss_pred ---HHHCCCCCCCCCCCEEEEEECCCCCCCHHH-HHHHHHHHHC---------CCCEEEEEECCCCCCCC----------
Q ss_conf ---998099978999969999934667669999-9999998110---------79399999169954621----------
Q 002589 799 ---RKHLGLSSADARKPLVGCITRLVPQKGVHL-IRHAIYRTLE---------LGGQFILLGSSPVPHIQ---------- 855 (904)
Q Consensus 799 ---rq~LGL~~~d~~~plIlfVGRL~~qKGIdl-LLeAiarLle---------~~vqLVIVGsGp~~~lq---------- 855 (904)
++++|+.. +++.+++++|.|++.+||.++ +++.+.++.+ .+.+||++|.|...+..
T Consensus 502 ~~l~~~~Gl~v-dpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~ 580 (796)
T 2c4m_A 502 EWILERQGIEI-DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINS 580 (796)
T ss_dssp HHHHHHHCCCC-CTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCC-CCCCCEEEEEECCHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99999859987-99976777764042530568829999999999860887778994999996287767988999999999
Q ss_pred --H-------------------------HHHHHHCCEEEECCC--CCCCHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf --8-------------------------999976482788689--78771899998269961126998642
Q 002589 856 --V-------------------------YPILLSSFSFLRKHI--FNICNLYIKLGQGGDLTVNNNCEPWL 897 (904)
Q Consensus 856 --~-------------------------e~LyAaADIfVvPSl--~EPfGLt~LEAMa~g~~V~~~~~~~~ 897 (904)
. +.++++||+++.||. +||||+++|.||--|+..+-+-.||.
T Consensus 581 va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGan 651 (796)
T 2c4m_A 581 IADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGAN 651 (796)
T ss_dssp HHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHH
T ss_pred HHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHCCCEEEECCCCEE
T ss_conf 99874246014996079997999989999986412240258999878876077899976974770457768
No 10
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=1.00 E-value=1 Score=231.76 Aligned_cols=362 Identities=16% Similarity=0.129 Sum_probs=237.4
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC-CCCCCCCCCCCEEEE--CCCCCCCCC-------CEE---------
Q ss_conf 7791899999999999978992999962899875-222233332210110--024784101-------203---------
Q 002589 526 KVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQ-YDRIDDLRALDVVVE--SYFDGRLFK-------NKV--------- 586 (904)
Q Consensus 526 kvGGLg~vV~~LakALqkkGHeV~VItPkY~~l~-~~~i~~L~~i~v~v~--syfdG~~~~-------~~V--------- 586 (904)
..||+|+......+.++..|....-++..|...- .+.+.+ +..++.. |...|.+++ +.|
T Consensus 111 gnGGLGrLAacfldS~a~l~~p~~G~Gi~Y~~G~F~Q~i~d--G~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~~ 188 (796)
T 1l5w_A 111 GNGGLGRLAACFLDSMATVGQSATGYGLNYQYGLFRQSFVD--GKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTKD 188 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEET--TEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECTT
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEECC--CEEEEECCCCCCCCCCCEEECCCCEEEEEECCEEEEC
T ss_conf 78737787999999897479982788621327762687028--8568716763347996224068827998609988541
Q ss_pred --EEEE--ECCE-----------------EEEEECCCCC-C-CCCCCC-----------------CCCCCCC----CHHH
Q ss_conf --5410--0890-----------------1998189999-8-654468-----------------7778886----0355
Q 002589 587 --WVST--IEGL-----------------PVYFIEPHHP-D-KFFWRG-----------------QFYGEHD----DFRR 622 (904)
Q Consensus 587 --~~g~--v~GI-----------------~VylIdp~~p-~-~fF~r~-----------------~iYg~~d----d~~R 622 (904)
|.+. +..+ .++-..+..+ . ..|..+ -+|+... ...|
T Consensus 189 ~~w~~~~~v~av~yd~pi~Gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lR 268 (796)
T 1l5w_A 189 GRWEPEFTITGQAWDLPVVGYRNGVAQPLRLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLR 268 (796)
T ss_dssp SCEECSEEEEEEEEEEEEECSSSCCEEEEEEEEEECSSCCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHH
T ss_pred CEECCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHCCCCCHHHHHHCHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 22048826999980056367777745999998824686347543277657666556476743664476999864439889
Q ss_pred ---HHHHHHHHHHH-HHHH-----CC----CCCEEEECCCCHHHHHHHHHHHHCC-CC--------CCCCEEEEEECCCC
Q ss_conf ---78999999999-9970-----99----9609998688154699999986365-79--------99980999951886
Q 002589 623 ---FSFFSRAALEL-LLQA-----GK----QPDIIHCHDWQTAFVAPLYWDLYVP-KG--------LNSARVCFTCHNFE 680 (904)
Q Consensus 623 ---f~~FsravLe~-L~q~-----g~----qPDIIH~HdW~talVapLl~~~ya~-~g--------l~~iPIV~TIHnl~ 680 (904)
-.+|+.++++. ++.. .+ +||||||||||+++++|-+.+.... .+ ..+..+++|+|+..
T Consensus 269 L~Qe~ff~~a~lq~ilr~~~~~~~~~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~ 348 (796)
T 1l5w_A 269 LMQQYFQCACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLM 348 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEECCCC
T ss_conf 98799999999999999998708984455876189844884286899999998664179878999986122778856871
Q ss_pred CCCC--CCHHHHHH-C--------CCCC--------------CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEECCHHH
Q ss_conf 6688--88245642-1--------9951--------------11378653356642211115657844247899819878
Q 002589 681 YQGT--APAKELAS-C--------GLDV--------------QQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSY 735 (904)
Q Consensus 681 yqG~--~p~~~L~~-~--------GL~~--------------~~l~~~drLqd~~~~~~in~lK~ai~~AD~VItVS~sy 735 (904)
++|. +|.+.+.. . +++. ..+.+ ..+. ....+++.+.++.+|+.|++||+.+
T Consensus 349 ~egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~-~~i~---~~~~vnMa~lai~~S~~VNgVS~lH 424 (796)
T 1l5w_A 349 PEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAK-LAVV---HDKQVHMANLCVVGGFAVNGVAALH 424 (796)
T ss_dssp GGGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHH-HCSE---ETTEEEHHHHHHHHSSEEEESSHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHH-HHCC---CCCCCCHHHHHHHHCCCCCCCCHHH
T ss_conf 76663089999998757988887166999999999865982887743-1221---0795448999998437113313899
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCC----CCCCCCHHHHCCC----------------CCC-------C
Q ss_conf 999985107887533223578809999468348988----9986201221046----------------343-------1
Q 002589 736 AQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAW----NPATDTFLKVQYN----------------AND-------L 788 (904)
Q Consensus 736 akeIl~~~~g~GL~~~L~~~k~Ki~VIpNGIDtd~f----~Patd~~L~~~ys----------------a~d-------l 788 (904)
++.++++.++ .++...+.++..|.|||+...| +|..++.+...|+ ++| +
T Consensus 425 ~e~ik~~~f~----~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~ 500 (796)
T 1l5w_A 425 SDLVVKDLFP----EYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYR 500 (796)
T ss_dssp HHHHHHTTSH----HHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHH
T ss_pred HHHHHHHHHH----HHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
T ss_conf 9998767766----798707663388848884778500259768899998549601148899998885399789999999
Q ss_pred CCHHHHHHH----HHHHCCCCCCCCCCCEEEEEECCCCCCCHHH-HHHHHHHHHC---------CCCEEEEEECCCCCCC
Q ss_conf 102442899----9998099978999969999934667669999-9999998110---------7939999916995462
Q 002589 789 QGKAENKES----IRKHLGLSSADARKPLVGCITRLVPQKGVHL-IRHAIYRTLE---------LGGQFILLGSSPVPHI 854 (904)
Q Consensus 789 ~gK~~~K~a----Lrq~LGL~~~d~~~plIlfVGRL~~qKGIdl-LLeAiarLle---------~~vqLVIVGsGp~~~l 854 (904)
++|..+|.+ +++++|+.. +++.+++++|.|++.+||.++ +++.+.++.+ .+.+||++|.|...+.
T Consensus 501 ~~K~~nK~~L~~~l~~~~Gl~v-dpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~ 579 (796)
T 1l5w_A 501 EIKQANKVRLAEFVKVRTGIEI-NPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY 579 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCC-CTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCH
T ss_pred HHHHHHHHHHHHHHHHHHCCCC-CCCCCEEEEEECCHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHH
T ss_conf 9999999999999999839985-999666766630535415487089899999998508877789949999962776578
Q ss_pred C------------H-------------------------HHHHHHCCEEEECCC--CCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 1------------8-------------------------999976482788689--787718999982699611269986
Q 002589 855 Q------------V-------------------------YPILLSSFSFLRKHI--FNICNLYIKLGQGGDLTVNNNCEP 895 (904)
Q Consensus 855 q------------~-------------------------e~LyAaADIfVvPSl--~EPfGLt~LEAMa~g~~V~~~~~~ 895 (904)
. . +.++++||+++.||. +||||+++|.||--|+..+-+-.|
T Consensus 580 ~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 659 (796)
T 1l5w_A 580 LAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHCCCEEECCCCC
T ss_conf 88999999999998742460149960799978999899999865200201589998787765778999869812567477
Q ss_pred CCC
Q ss_conf 422
Q 002589 896 WLH 898 (904)
Q Consensus 896 ~~~ 898 (904)
|..
T Consensus 660 anv 662 (796)
T 1l5w_A 660 ANV 662 (796)
T ss_dssp THH
T ss_pred EEE
T ss_conf 541
Done!