Query 002591
Match_columns 903
No_of_seqs 1284 out of 3986
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 03:06:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002591.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002591hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 8.9E-45 1.9E-49 375.5 26.3 311 541-903 118-479 (480)
2 KOG0271 Notchless-like WD40 re 100.0 3.8E-43 8.2E-48 363.4 25.7 289 613-903 105-437 (480)
3 KOG0272 U4/U6 small nuclear ri 100.0 4.3E-41 9.3E-46 353.1 24.4 287 612-903 164-458 (459)
4 KOG0286 G-protein beta subunit 100.0 7.5E-39 1.6E-43 322.2 34.3 290 611-903 43-343 (343)
5 KOG0265 U5 snRNP-specific prot 100.0 9.3E-37 2E-41 308.4 28.1 286 615-901 39-334 (338)
6 KOG0272 U4/U6 small nuclear ri 100.0 2.1E-37 4.5E-42 325.4 22.8 244 614-862 208-458 (459)
7 KOG0285 Pleiotropic regulator 100.0 1.3E-35 2.7E-40 305.3 26.0 286 612-903 140-437 (460)
8 KOG0318 WD40 repeat stress pro 100.0 3.1E-34 6.7E-39 308.3 37.3 360 540-903 61-600 (603)
9 KOG0279 G protein beta subunit 100.0 1.6E-34 3.4E-39 289.7 32.5 285 612-903 4-311 (315)
10 KOG0295 WD40 repeat-containing 100.0 1.8E-35 3.8E-40 305.8 23.8 288 612-903 97-404 (406)
11 KOG0315 G-protein beta subunit 100.0 1.7E-34 3.7E-39 284.7 29.4 266 636-903 11-286 (311)
12 KOG0266 WD40 repeat-containing 100.0 6.5E-34 1.4E-38 329.0 39.4 287 613-903 148-452 (456)
13 KOG0284 Polyadenylation factor 100.0 7.4E-36 1.6E-40 312.2 17.4 275 623-903 96-378 (464)
14 cd00200 WD40 WD40 domain, foun 100.0 1.1E-32 2.4E-37 294.6 37.8 282 617-903 3-289 (289)
15 KOG0282 mRNA splicing factor [ 100.0 2.5E-34 5.5E-39 307.0 18.9 290 612-903 203-503 (503)
16 KOG0291 WD40-repeat-containing 100.0 2.1E-32 4.6E-37 304.4 34.6 292 607-903 291-610 (893)
17 KOG0273 Beta-transducin family 100.0 6.7E-33 1.5E-37 294.8 28.9 280 616-903 172-480 (524)
18 KOG0645 WD40 repeat protein [G 100.0 3.5E-32 7.5E-37 271.8 32.2 281 613-903 4-309 (312)
19 KOG0315 G-protein beta subunit 100.0 2.3E-32 4.9E-37 269.7 30.3 267 612-884 29-309 (311)
20 KOG0279 G protein beta subunit 100.0 2.4E-32 5.3E-37 274.0 28.7 249 613-864 53-313 (315)
21 KOG0293 WD40 repeat-containing 100.0 5.1E-33 1.1E-37 290.7 22.2 286 611-903 212-511 (519)
22 KOG0319 WD40-repeat-containing 100.0 5.3E-32 1.2E-36 301.5 30.7 290 610-903 310-617 (775)
23 KOG0273 Beta-transducin family 100.0 1.1E-31 2.3E-36 285.6 30.9 274 623-903 235-521 (524)
24 KOG0263 Transcription initiati 100.0 5.7E-32 1.2E-36 304.9 28.6 272 617-893 372-703 (707)
25 KOG0296 Angio-associated migra 100.0 5.2E-31 1.1E-35 273.0 31.0 298 596-903 82-396 (399)
26 PLN00181 protein SPA1-RELATED; 100.0 2.3E-30 5E-35 320.7 41.2 282 619-903 479-791 (793)
27 KOG0276 Vesicle coat complex C 100.0 2E-31 4.4E-36 290.9 26.7 282 615-901 5-295 (794)
28 KOG0263 Transcription initiati 100.0 1.8E-31 3.9E-36 300.9 26.6 263 542-821 382-651 (707)
29 KOG0281 Beta-TrCP (transducin 100.0 1.4E-32 3E-37 281.5 15.5 264 621-903 195-475 (499)
30 KOG0319 WD40-repeat-containing 100.0 3.6E-31 7.7E-36 295.0 28.0 349 544-903 25-575 (775)
31 KOG0286 G-protein beta subunit 100.0 3.1E-30 6.7E-35 260.2 30.9 243 615-862 89-343 (343)
32 KOG0291 WD40-repeat-containing 100.0 1.2E-29 2.5E-34 282.7 38.3 278 621-903 263-548 (893)
33 KOG0316 Conserved WD40 repeat- 100.0 1.3E-30 2.8E-35 255.3 25.9 281 612-902 6-296 (307)
34 KOG0306 WD40-repeat-containing 100.0 1.8E-30 4E-35 289.0 28.0 279 617-903 367-662 (888)
35 KOG0284 Polyadenylation factor 100.0 7E-32 1.5E-36 282.5 14.5 272 587-863 102-379 (464)
36 KOG0318 WD40 repeat stress pro 100.0 3.1E-29 6.8E-34 269.9 33.3 282 614-903 50-348 (603)
37 KOG0275 Conserved WD40 repeat- 100.0 3.3E-31 7.1E-36 268.9 16.5 277 621-903 211-507 (508)
38 KOG0295 WD40 repeat-containing 100.0 2E-30 4.4E-35 268.4 21.8 256 600-863 130-405 (406)
39 KOG0278 Serine/threonine kinas 100.0 1.1E-30 2.3E-35 257.7 18.4 278 618-903 9-295 (334)
40 KOG0306 WD40-repeat-containing 100.0 6.5E-29 1.4E-33 276.6 34.3 343 549-902 33-577 (888)
41 KOG0292 Vesicle coat complex C 100.0 8.1E-30 1.8E-34 287.2 27.1 281 618-902 4-318 (1202)
42 KOG0643 Translation initiation 100.0 8.6E-30 1.9E-34 253.9 23.5 279 618-902 5-314 (327)
43 KOG0296 Angio-associated migra 100.0 2.3E-29 5E-34 260.8 27.4 286 615-903 56-354 (399)
44 KOG1407 WD40 repeat protein [F 100.0 3.8E-29 8.3E-34 248.7 27.0 274 617-896 14-293 (313)
45 KOG0772 Uncharacterized conser 100.0 8.4E-29 1.8E-33 265.5 26.2 290 612-902 156-484 (641)
46 KOG0266 WD40 repeat-containing 100.0 1.8E-28 3.9E-33 283.7 30.8 245 615-864 195-454 (456)
47 KOG0288 WD40 repeat protein Ti 100.0 8.9E-30 1.9E-34 267.3 17.5 286 612-903 164-459 (459)
48 KOG0285 Pleiotropic regulator 100.0 3.2E-29 6.9E-34 258.3 21.0 243 654-903 140-387 (460)
49 KOG0281 Beta-TrCP (transducin 100.0 7.8E-30 1.7E-34 261.4 16.0 277 582-869 196-482 (499)
50 KOG1446 Histone H3 (Lys4) meth 100.0 1.9E-27 4.2E-32 243.6 33.4 287 612-902 3-300 (311)
51 KOG0640 mRNA cleavage stimulat 100.0 1.2E-28 2.6E-33 249.6 22.7 284 615-903 104-424 (430)
52 KOG0268 Sof1-like rRNA process 100.0 2.4E-29 5.1E-34 260.0 15.7 281 612-903 55-343 (433)
53 KOG0276 Vesicle coat complex C 100.0 8.2E-28 1.8E-32 262.9 27.5 246 612-860 44-295 (794)
54 cd00200 WD40 WD40 domain, foun 100.0 9E-27 2E-31 248.8 35.2 242 616-862 44-289 (289)
55 KOG0313 Microtubule binding pr 100.0 1.1E-27 2.4E-32 249.3 26.2 276 621-903 103-416 (423)
56 KOG0277 Peroxisomal targeting 100.0 5.3E-28 1.2E-32 239.6 22.7 276 626-903 11-307 (311)
57 KOG0275 Conserved WD40 repeat- 100.0 7.7E-29 1.7E-33 251.7 16.7 276 543-862 218-507 (508)
58 KOG0282 mRNA splicing factor [ 100.0 6E-29 1.3E-33 266.0 15.5 246 655-903 204-460 (503)
59 KOG0265 U5 snRNP-specific prot 100.0 5.6E-27 1.2E-31 237.7 26.9 240 617-862 84-336 (338)
60 KOG0645 WD40 repeat protein [G 100.0 7.3E-27 1.6E-31 233.8 26.9 266 576-864 29-311 (312)
61 KOG0310 Conserved WD40 repeat- 100.0 3.6E-27 7.8E-32 253.0 26.4 274 623-901 26-305 (487)
62 KOG0289 mRNA splicing factor [ 100.0 6E-27 1.3E-31 247.1 26.9 276 623-902 219-503 (506)
63 KOG0274 Cdc4 and related F-box 100.0 1E-26 2.2E-31 268.8 30.3 269 622-903 207-480 (537)
64 KOG0293 WD40 repeat-containing 100.0 2.5E-27 5.3E-32 248.3 22.7 248 612-865 258-514 (519)
65 KOG0283 WD40 repeat-containing 100.0 4.5E-27 9.9E-32 267.7 26.0 244 615-864 258-576 (712)
66 PLN00181 protein SPA1-RELATED; 100.0 7.5E-26 1.6E-30 280.5 37.4 238 623-863 532-792 (793)
67 PTZ00420 coronin; Provisional 100.0 1.5E-25 3.3E-30 259.8 37.1 247 641-887 50-318 (568)
68 KOG0300 WD40 repeat-containing 100.0 7.8E-27 1.7E-31 236.8 22.5 287 612-903 137-474 (481)
69 KOG0292 Vesicle coat complex C 99.9 5.5E-27 1.2E-31 264.5 22.0 242 660-903 4-278 (1202)
70 PTZ00421 coronin; Provisional 99.9 2.5E-25 5.3E-30 257.0 35.6 263 622-886 19-314 (493)
71 KOG0647 mRNA export protein (c 99.9 8E-26 1.7E-30 229.4 26.6 270 621-893 25-311 (347)
72 KOG0973 Histone transcription 99.9 6.3E-26 1.4E-30 264.2 29.3 277 622-902 12-352 (942)
73 KOG0305 Anaphase promoting com 99.9 6.7E-26 1.5E-30 252.7 28.3 265 629-903 183-459 (484)
74 KOG0278 Serine/threonine kinas 99.9 4.1E-27 8.8E-32 232.5 16.0 252 612-869 48-302 (334)
75 KOG0316 Conserved WD40 repeat- 99.9 6.7E-26 1.4E-30 222.3 23.1 254 601-861 37-296 (307)
76 KOG0313 Microtubule binding pr 99.9 8.7E-26 1.9E-30 235.2 24.4 259 597-864 122-418 (423)
77 KOG0641 WD40 repeat protein [G 99.9 3.7E-24 7.9E-29 208.4 32.8 287 612-902 22-346 (350)
78 KOG0277 Peroxisomal targeting 99.9 6.9E-26 1.5E-30 224.7 20.7 248 612-863 50-308 (311)
79 KOG0274 Cdc4 and related F-box 99.9 3.1E-25 6.7E-30 256.5 28.9 250 607-869 232-487 (537)
80 KOG0294 WD40 repeat-containing 99.9 4.6E-25 9.9E-30 225.1 26.1 263 611-883 31-305 (362)
81 KOG0973 Histone transcription 99.9 5.2E-25 1.1E-29 256.6 28.2 250 614-867 60-358 (942)
82 KOG0308 Conserved WD40 repeat- 99.9 5.4E-26 1.2E-30 250.3 18.7 268 633-903 35-325 (735)
83 KOG0310 Conserved WD40 repeat- 99.9 6E-25 1.3E-29 236.0 26.0 237 623-865 68-310 (487)
84 KOG1407 WD40 repeat protein [F 99.9 2.7E-25 5.9E-30 221.3 21.2 238 659-901 14-257 (313)
85 KOG1408 WD40 repeat protein [F 99.9 8E-25 1.7E-29 241.8 26.5 347 556-903 279-711 (1080)
86 KOG0283 WD40 repeat-containing 99.9 4.5E-25 9.9E-30 251.5 24.1 244 657-903 258-574 (712)
87 PTZ00421 coronin; Provisional 99.9 1E-23 2.2E-28 243.6 34.7 224 617-845 69-314 (493)
88 KOG1036 Mitotic spindle checkp 99.9 4.3E-24 9.4E-29 217.9 27.2 269 622-895 12-294 (323)
89 KOG1539 WD repeat protein [Gen 99.9 1.8E-23 3.9E-28 236.3 34.8 346 556-902 133-645 (910)
90 KOG0305 Anaphase promoting com 99.9 4.7E-24 1E-28 238.0 29.6 237 623-866 217-463 (484)
91 KOG0288 WD40 repeat protein Ti 99.9 5.2E-25 1.1E-29 231.6 19.6 241 613-861 209-458 (459)
92 KOG2096 WD40 repeat protein [G 99.9 5E-24 1.1E-28 217.2 25.9 283 616-902 79-399 (420)
93 KOG0640 mRNA cleavage stimulat 99.9 7.7E-25 1.7E-29 222.1 19.8 248 613-864 162-426 (430)
94 KOG0294 WD40 repeat-containing 99.9 7E-24 1.5E-28 216.5 26.8 257 637-903 3-279 (362)
95 KOG0301 Phospholipase A2-activ 99.9 4.7E-24 1E-28 236.9 26.7 274 612-902 3-285 (745)
96 KOG0299 U3 snoRNP-associated p 99.9 5.7E-24 1.2E-28 226.8 26.2 274 616-893 135-443 (479)
97 KOG0641 WD40 repeat protein [G 99.9 1.4E-22 3.1E-27 197.3 31.6 246 615-864 81-349 (350)
98 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 2E-22 4.4E-27 219.9 35.7 261 636-903 2-277 (300)
99 KOG0639 Transducin-like enhanc 99.9 3.6E-24 7.7E-29 228.9 20.5 275 621-902 417-701 (705)
100 KOG1273 WD40 repeat protein [G 99.9 2.1E-23 4.6E-28 212.4 24.5 275 626-903 26-320 (405)
101 PTZ00420 coronin; Provisional 99.9 1.2E-22 2.6E-27 235.8 33.8 229 613-846 64-318 (568)
102 KOG1446 Histone H3 (Lys4) meth 99.9 1.7E-22 3.7E-27 207.5 30.3 246 655-903 4-260 (311)
103 KOG0264 Nucleosome remodeling 99.9 1.5E-23 3.3E-28 224.0 23.0 245 620-903 121-402 (422)
104 KOG1332 Vesicle coat complex C 99.9 9.8E-24 2.1E-28 208.4 19.1 245 620-864 8-286 (299)
105 KOG1408 WD40 repeat protein [F 99.9 1.4E-23 3E-28 232.1 21.3 244 620-866 456-715 (1080)
106 KOG0643 Translation initiation 99.9 1E-22 2.3E-27 203.5 25.3 231 660-894 5-250 (327)
107 KOG2055 WD40 repeat protein [G 99.9 1E-22 2.2E-27 217.1 25.0 281 622-903 212-510 (514)
108 KOG0301 Phospholipase A2-activ 99.9 9.5E-23 2.1E-27 226.5 25.2 239 612-866 46-290 (745)
109 KOG2445 Nuclear pore complex c 99.9 2.4E-22 5.2E-27 204.6 25.2 255 620-903 10-316 (361)
110 KOG0289 mRNA splicing factor [ 99.9 2.2E-22 4.7E-27 212.9 25.2 249 612-863 250-505 (506)
111 KOG0308 Conserved WD40 repeat- 99.9 2.3E-23 5E-28 229.7 18.6 303 597-903 44-391 (735)
112 KOG1332 Vesicle coat complex C 99.9 3.3E-23 7.2E-28 204.7 17.7 241 662-903 8-284 (299)
113 KOG0650 WD40 repeat nucleolar 99.9 1.6E-22 3.4E-27 221.0 24.1 289 609-902 386-732 (733)
114 KOG1539 WD repeat protein [Gen 99.9 5.3E-21 1.2E-25 216.4 36.4 359 538-903 74-604 (910)
115 KOG0772 Uncharacterized conser 99.9 1.1E-22 2.5E-27 218.7 21.6 235 623-861 214-484 (641)
116 KOG2106 Uncharacterized conser 99.9 8.3E-21 1.8E-25 204.0 35.6 255 604-864 226-521 (626)
117 KOG0647 mRNA export protein (c 99.9 9.7E-22 2.1E-26 199.9 26.1 229 617-854 66-313 (347)
118 KOG0268 Sof1-like rRNA process 99.9 4.4E-23 9.5E-28 213.8 16.1 257 599-867 88-348 (433)
119 KOG0269 WD40 repeat-containing 99.9 1.2E-22 2.6E-27 228.1 20.4 273 625-900 41-335 (839)
120 KOG0299 U3 snoRNP-associated p 99.9 8.4E-22 1.8E-26 210.3 24.5 230 620-854 199-445 (479)
121 KOG0267 Microtubule severing p 99.9 8.9E-24 1.9E-28 235.3 9.7 236 617-896 22-259 (825)
122 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 3.2E-20 6.9E-25 202.6 37.7 263 614-885 22-300 (300)
123 KOG4283 Transcription-coupled 99.9 2.7E-21 5.8E-26 195.5 25.7 281 618-902 38-362 (397)
124 KOG0300 WD40 repeat-containing 99.9 4.2E-22 9.1E-27 202.6 19.5 256 637-903 126-426 (481)
125 KOG0321 WD40 repeat-containing 99.9 7.9E-22 1.7E-26 217.3 21.7 274 628-903 54-389 (720)
126 KOG1063 RNA polymerase II elon 99.9 5E-21 1.1E-25 212.8 27.9 283 617-903 261-646 (764)
127 KOG0639 Transducin-like enhanc 99.9 3.4E-22 7.3E-27 213.9 17.0 259 598-863 438-703 (705)
128 KOG2106 Uncharacterized conser 99.9 4.6E-20 1E-24 198.3 33.3 289 600-903 180-519 (626)
129 KOG1274 WD40 repeat protein [G 99.9 8.2E-21 1.8E-25 217.3 29.1 274 620-901 10-296 (933)
130 KOG0646 WD40 repeat protein [G 99.9 2.1E-21 4.5E-26 207.8 20.9 228 622-852 80-337 (476)
131 KOG2048 WD40 repeat protein [G 99.9 1E-19 2.2E-24 202.4 34.3 353 542-903 29-503 (691)
132 KOG2048 WD40 repeat protein [G 99.9 6.3E-20 1.4E-24 204.1 31.6 275 619-901 21-315 (691)
133 KOG0264 Nucleosome remodeling 99.9 1E-20 2.2E-25 202.5 23.1 216 612-865 166-405 (422)
134 KOG1274 WD40 repeat protein [G 99.9 2.2E-20 4.8E-25 213.8 27.2 238 663-903 11-260 (933)
135 KOG1036 Mitotic spindle checkp 99.9 4.5E-20 9.7E-25 188.8 26.4 223 622-854 53-294 (323)
136 KOG4328 WD40 protein [Function 99.9 1.9E-20 4.2E-25 199.7 24.2 292 610-902 173-492 (498)
137 KOG0302 Ribosome Assembly prot 99.9 1.2E-20 2.7E-25 196.7 21.6 245 620-902 148-435 (440)
138 KOG4378 Nuclear protein COP1 [ 99.9 9.8E-21 2.1E-25 202.7 21.2 257 625-887 36-305 (673)
139 KOG0646 WD40 repeat protein [G 99.9 2.5E-20 5.4E-25 199.6 23.5 232 636-903 51-305 (476)
140 KOG0270 WD40 repeat-containing 99.9 1.9E-20 4E-25 199.4 21.0 241 627-869 177-454 (463)
141 KOG0267 Microtubule severing p 99.9 7E-22 1.5E-26 220.3 10.1 199 614-814 61-262 (825)
142 KOG0642 Cell-cycle nuclear pro 99.8 5.7E-21 1.2E-25 208.7 14.2 258 612-874 283-572 (577)
143 KOG0307 Vesicle coat complex C 99.8 1E-20 2.3E-25 221.7 16.3 242 623-867 64-330 (1049)
144 KOG1538 Uncharacterized conser 99.8 1.4E-19 2.9E-24 199.3 23.3 269 625-903 14-291 (1081)
145 KOG1034 Transcriptional repres 99.8 1.5E-19 3.3E-24 185.8 21.8 288 612-903 26-381 (385)
146 KOG0307 Vesicle coat complex C 99.8 6.9E-21 1.5E-25 223.2 13.5 274 626-902 9-324 (1049)
147 KOG4227 WD40 repeat protein [G 99.8 1.3E-19 2.7E-24 189.0 21.1 314 585-903 18-385 (609)
148 KOG0269 WD40 repeat-containing 99.8 1.8E-20 3.9E-25 210.7 15.9 236 626-865 90-341 (839)
149 KOG4283 Transcription-coupled 99.8 2.1E-19 4.5E-24 181.9 21.1 207 662-868 40-280 (397)
150 KOG0321 WD40 repeat-containing 99.8 1.2E-19 2.6E-24 200.3 20.9 247 617-866 94-393 (720)
151 KOG2096 WD40 repeat protein [G 99.8 3.8E-19 8.3E-24 181.7 21.5 274 541-818 89-401 (420)
152 KOG2919 Guanine nucleotide-bin 99.8 6.7E-19 1.4E-23 180.5 23.1 266 625-895 51-360 (406)
153 KOG4328 WD40 protein [Function 99.8 2.6E-19 5.7E-24 191.1 20.2 254 650-903 171-448 (498)
154 KOG2055 WD40 repeat protein [G 99.8 8.6E-19 1.9E-23 187.3 23.9 248 614-864 248-512 (514)
155 KOG4378 Nuclear protein COP1 [ 99.8 5.3E-19 1.2E-23 189.5 21.0 218 625-846 81-305 (673)
156 KOG1063 RNA polymerase II elon 99.8 1.5E-18 3.4E-23 193.2 25.2 291 612-903 180-600 (764)
157 COG2319 FOG: WD40 repeat [Gene 99.8 1.5E-16 3.3E-21 178.8 42.2 293 601-903 135-440 (466)
158 COG2319 FOG: WD40 repeat [Gene 99.8 7.4E-17 1.6E-21 181.4 39.1 282 618-903 60-357 (466)
159 KOG0650 WD40 repeat nucleolar 99.8 8.7E-19 1.9E-23 191.9 21.3 242 656-902 391-677 (733)
160 KOG0322 G-protein beta subunit 99.8 2.1E-19 4.6E-24 179.7 14.7 284 614-903 5-321 (323)
161 KOG1273 WD40 repeat protein [G 99.8 2.5E-18 5.4E-23 175.7 22.0 248 612-865 54-323 (405)
162 KOG1009 Chromatin assembly com 99.8 7.2E-18 1.6E-22 178.0 24.3 295 576-901 28-368 (434)
163 KOG0644 Uncharacterized conser 99.8 5.7E-20 1.2E-24 207.2 9.1 275 612-902 179-465 (1113)
164 KOG0270 WD40 repeat-containing 99.8 5.3E-18 1.2E-22 180.8 23.0 233 669-903 177-447 (463)
165 KOG1445 Tumor-specific antigen 99.8 1.3E-17 2.8E-22 183.0 24.1 136 767-903 600-748 (1012)
166 KOG1188 WD40 repeat protein [G 99.8 2.4E-18 5.2E-23 178.0 17.2 267 636-903 41-344 (376)
167 KOG0302 Ribosome Assembly prot 99.8 3.8E-18 8.3E-23 178.2 18.5 206 661-903 147-376 (440)
168 KOG1007 WD repeat protein TSSC 99.8 1.6E-17 3.5E-22 168.1 20.8 299 586-901 26-357 (370)
169 KOG1517 Guanine nucleotide bin 99.8 1.2E-16 2.7E-21 184.6 28.4 279 623-903 1064-1379(1387)
170 KOG1334 WD40 repeat protein [G 99.8 2.1E-18 4.6E-23 185.3 13.1 291 612-902 131-463 (559)
171 PRK11028 6-phosphogluconolacto 99.8 5.6E-16 1.2E-20 172.9 32.5 263 638-903 5-302 (330)
172 PRK11028 6-phosphogluconolacto 99.8 1.1E-15 2.4E-20 170.5 34.3 261 600-864 12-304 (330)
173 KOG0303 Actin-binding protein 99.7 1.9E-16 4E-21 166.5 23.3 210 658-868 74-298 (472)
174 KOG1034 Transcriptional repres 99.7 6.3E-17 1.4E-21 166.6 18.3 240 621-864 87-383 (385)
175 KOG1240 Protein kinase contain 99.7 1.5E-15 3.3E-20 178.5 31.9 292 612-903 1037-1431(1431)
176 KOG2445 Nuclear pore complex c 99.7 7.5E-16 1.6E-20 157.5 25.4 238 612-884 48-341 (361)
177 KOG0642 Cell-cycle nuclear pro 99.7 2.2E-17 4.8E-22 180.8 15.2 243 659-903 288-559 (577)
178 KOG0290 Conserved WD40 repeat- 99.7 5.1E-16 1.1E-20 157.5 21.7 238 621-861 94-362 (364)
179 KOG2919 Guanine nucleotide-bin 99.7 7.8E-16 1.7E-20 158.2 23.3 231 623-856 104-362 (406)
180 KOG0303 Actin-binding protein 99.7 3.7E-16 7.9E-21 164.3 19.9 201 616-821 74-296 (472)
181 KOG0649 WD40 repeat protein [G 99.7 3.2E-15 6.9E-20 148.2 25.2 267 625-903 12-314 (325)
182 KOG1587 Cytoplasmic dynein int 99.7 1.9E-15 4.2E-20 173.9 26.4 256 645-903 222-514 (555)
183 KOG0649 WD40 repeat protein [G 99.7 1.4E-15 2.9E-20 150.8 20.9 227 667-902 12-271 (325)
184 KOG2110 Uncharacterized conser 99.7 1.3E-14 2.9E-19 152.1 28.9 231 623-865 5-249 (391)
185 KOG1963 WD40 repeat protein [G 99.7 5E-15 1.1E-19 170.3 27.4 279 621-903 203-536 (792)
186 KOG1587 Cytoplasmic dynein int 99.7 1.9E-15 4E-20 174.1 23.6 244 622-866 241-518 (555)
187 KOG1310 WD40 repeat protein [G 99.7 1.7E-16 3.6E-21 172.3 14.0 237 613-869 40-308 (758)
188 KOG1524 WD40 repeat-containing 99.7 1.1E-15 2.4E-20 165.7 19.8 259 621-901 12-282 (737)
189 KOG1188 WD40 repeat protein [G 99.7 1E-15 2.3E-20 158.7 18.6 252 612-864 59-346 (376)
190 KOG0290 Conserved WD40 repeat- 99.7 7.2E-15 1.6E-19 149.2 23.6 282 614-901 36-361 (364)
191 KOG1523 Actin-related protein 99.7 7.1E-15 1.5E-19 151.4 23.0 224 618-844 5-259 (361)
192 KOG1007 WD repeat protein TSSC 99.7 4.1E-15 8.9E-20 150.8 20.2 207 611-819 110-361 (370)
193 KOG1272 WD40-repeat-containing 99.7 2.6E-16 5.6E-21 168.5 11.2 262 624-897 130-401 (545)
194 KOG1538 Uncharacterized conser 99.7 6.1E-15 1.3E-19 163.0 20.9 237 616-865 46-294 (1081)
195 PRK01742 tolB translocation pr 99.7 9.1E-15 2E-19 168.8 23.4 230 644-886 183-426 (429)
196 KOG2110 Uncharacterized conser 99.6 6E-14 1.3E-18 147.2 26.3 228 665-903 5-246 (391)
197 KOG1445 Tumor-specific antigen 99.6 1.1E-14 2.3E-19 160.3 21.4 230 633-903 589-842 (1012)
198 KOG4227 WD40 repeat protein [G 99.6 2.8E-14 6.2E-19 149.4 22.9 242 621-863 103-386 (609)
199 PF02239 Cytochrom_D1: Cytochr 99.6 5.3E-13 1.1E-17 149.8 33.9 264 637-903 7-345 (369)
200 PRK01742 tolB translocation pr 99.6 3E-14 6.5E-19 164.5 24.2 222 617-845 197-426 (429)
201 KOG2139 WD40 repeat protein [G 99.6 1.1E-13 2.4E-18 144.4 25.3 276 623-902 98-428 (445)
202 KOG4497 Uncharacterized conser 99.6 2.2E-13 4.7E-18 140.5 25.1 269 624-898 49-425 (447)
203 KOG2321 WD40 repeat protein [G 99.6 1.3E-13 2.9E-18 151.2 24.2 275 621-902 49-340 (703)
204 KOG2394 WD40 protein DMR-N9 [G 99.6 4.3E-14 9.3E-19 154.0 19.8 242 625-884 125-383 (636)
205 KOG1517 Guanine nucleotide bin 99.6 4.1E-14 8.9E-19 164.1 20.8 266 601-867 1087-1384(1387)
206 KOG1963 WD40 repeat protein [G 99.6 2.8E-13 6.1E-18 156.1 27.5 273 626-902 19-319 (792)
207 PRK03629 tolB translocation pr 99.6 6.1E-13 1.3E-17 153.4 30.2 232 645-885 179-427 (429)
208 KOG0771 Prolactin regulatory e 99.6 2.1E-14 4.6E-19 153.2 16.4 191 627-819 148-354 (398)
209 KOG1524 WD40 repeat-containing 99.6 3E-14 6.5E-19 154.7 16.5 206 636-862 76-284 (737)
210 KOG2315 Predicted translation 99.6 1.3E-12 2.7E-17 144.0 28.8 268 625-903 75-388 (566)
211 KOG1009 Chromatin assembly com 99.6 2.6E-13 5.6E-18 143.9 21.9 237 612-869 112-377 (434)
212 KOG4497 Uncharacterized conser 99.6 3E-13 6.4E-18 139.5 20.6 271 628-902 13-388 (447)
213 KOG3881 Uncharacterized conser 99.6 3E-13 6.5E-18 142.9 21.0 261 621-886 53-342 (412)
214 KOG1523 Actin-related protein 99.6 4E-13 8.6E-18 138.6 21.3 235 660-896 5-269 (361)
215 PRK05137 tolB translocation pr 99.6 2E-12 4.3E-17 149.8 30.0 231 645-885 182-432 (435)
216 PRK04922 tolB translocation pr 99.6 1.3E-12 2.9E-17 151.1 28.5 232 645-885 184-432 (433)
217 KOG0771 Prolactin regulatory e 99.5 6.3E-14 1.4E-18 149.7 14.7 194 669-902 148-351 (398)
218 KOG2111 Uncharacterized conser 99.5 1.4E-11 3E-16 127.4 30.6 229 625-865 7-257 (346)
219 KOG1354 Serine/threonine prote 99.5 8.3E-13 1.8E-17 137.1 20.4 241 622-866 24-361 (433)
220 PF10282 Lactonase: Lactonase, 99.5 8.6E-11 1.9E-15 131.8 38.6 271 612-883 26-345 (345)
221 KOG0644 Uncharacterized conser 99.5 2.3E-14 5E-19 162.5 9.5 247 612-869 221-473 (1113)
222 PRK03629 tolB translocation pr 99.5 1.1E-11 2.3E-16 143.1 31.1 203 688-898 180-396 (429)
223 PRK02889 tolB translocation pr 99.5 1.1E-11 2.4E-16 143.0 29.1 233 645-886 176-425 (427)
224 KOG1240 Protein kinase contain 99.5 3.5E-12 7.5E-17 150.7 24.0 249 650-903 1034-1332(1431)
225 PF02239 Cytochrom_D1: Cytochr 99.5 6.3E-11 1.4E-15 133.1 33.0 253 612-870 25-353 (369)
226 PF10282 Lactonase: Lactonase, 99.5 2.3E-10 4.9E-15 128.4 37.3 266 638-903 2-320 (345)
227 PRK04922 tolB translocation pr 99.5 1.1E-11 2.4E-16 143.4 27.5 220 616-844 196-432 (433)
228 PRK02889 tolB translocation pr 99.5 6.1E-12 1.3E-16 145.2 25.1 221 617-844 189-424 (427)
229 KOG2111 Uncharacterized conser 99.5 1.9E-11 4.2E-16 126.4 25.0 229 667-902 7-253 (346)
230 KOG1334 WD40 repeat protein [G 99.5 5.6E-13 1.2E-17 144.0 14.2 249 655-903 132-422 (559)
231 KOG3881 Uncharacterized conser 99.5 4.9E-12 1.1E-16 133.9 20.7 235 664-903 54-318 (412)
232 KOG2321 WD40 repeat protein [G 99.5 5.2E-12 1.1E-16 138.9 21.5 237 663-903 49-300 (703)
233 COG5354 Uncharacterized protei 99.4 6.8E-11 1.5E-15 129.0 28.2 272 623-903 71-393 (561)
234 KOG1409 Uncharacterized conser 99.4 5.4E-12 1.2E-16 131.4 18.8 249 612-865 13-271 (404)
235 KOG2394 WD40 protein DMR-N9 [G 99.4 1.8E-11 3.9E-16 133.8 23.5 167 633-800 183-384 (636)
236 TIGR02800 propeller_TolB tol-p 99.4 4.7E-11 1E-15 137.7 28.6 230 645-883 170-416 (417)
237 KOG1272 WD40-repeat-containing 99.4 3E-13 6.5E-18 145.3 9.5 227 666-903 130-360 (545)
238 KOG0322 G-protein beta subunit 99.4 4.1E-12 9E-17 127.9 16.6 203 614-818 46-322 (323)
239 PRK05137 tolB translocation pr 99.4 4.4E-11 9.5E-16 138.6 27.7 202 687-896 182-397 (435)
240 KOG1310 WD40 repeat protein [G 99.4 1.2E-12 2.5E-17 142.8 13.0 219 656-903 41-301 (758)
241 KOG2139 WD40 repeat protein [G 99.4 2.1E-11 4.5E-16 127.7 20.9 226 619-863 192-430 (445)
242 PRK00178 tolB translocation pr 99.4 1.2E-10 2.6E-15 135.0 30.0 232 646-886 180-428 (430)
243 PRK04792 tolB translocation pr 99.4 1.7E-10 3.7E-15 133.8 28.5 231 646-885 199-446 (448)
244 KOG0974 WD-repeat protein WDR6 99.4 1.7E-11 3.7E-16 143.7 19.7 265 622-903 6-286 (967)
245 TIGR02658 TTQ_MADH_Hv methylam 99.4 1.1E-09 2.4E-14 120.5 32.5 256 645-903 27-328 (352)
246 COG2706 3-carboxymuconate cycl 99.4 1.7E-09 3.8E-14 114.6 32.3 263 621-883 37-344 (346)
247 PF08662 eIF2A: Eukaryotic tra 99.4 5.5E-11 1.2E-15 121.7 19.9 108 789-903 58-177 (194)
248 KOG2314 Translation initiation 99.3 1.4E-10 3E-15 127.4 23.3 283 609-898 237-560 (698)
249 PF08662 eIF2A: Eukaryotic tra 99.3 1.1E-10 2.4E-15 119.5 19.4 148 669-819 9-179 (194)
250 PRK01029 tolB translocation pr 99.3 1.4E-09 3E-14 125.3 29.7 236 645-887 165-426 (428)
251 TIGR02800 propeller_TolB tol-p 99.3 8.3E-10 1.8E-14 127.3 27.0 202 688-897 171-386 (417)
252 PRK04792 tolB translocation pr 99.3 6.7E-10 1.4E-14 128.8 25.8 218 618-844 212-446 (448)
253 PRK00178 tolB translocation pr 99.3 8.9E-10 1.9E-14 127.7 26.5 220 616-844 191-427 (430)
254 KOG2041 WD40 repeat protein [G 99.3 4.9E-10 1.1E-14 125.7 22.4 274 622-901 13-333 (1189)
255 KOG4547 WD40 repeat-containing 99.3 6.4E-10 1.4E-14 123.9 23.2 184 633-820 3-221 (541)
256 PRK01029 tolB translocation pr 99.2 1.7E-09 3.7E-14 124.5 26.6 211 688-902 166-400 (428)
257 KOG0309 Conserved WD40 repeat- 99.2 4.7E-11 1E-15 134.4 13.0 278 623-903 24-337 (1081)
258 KOG2315 Predicted translation 99.2 2.3E-09 5E-14 118.7 25.6 246 627-885 129-410 (566)
259 TIGR02658 TTQ_MADH_Hv methylam 99.2 3.4E-08 7.4E-13 108.9 34.4 246 612-870 36-336 (352)
260 KOG0280 Uncharacterized conser 99.2 5.7E-10 1.2E-14 114.4 18.5 241 622-902 68-330 (339)
261 KOG4190 Uncharacterized conser 99.2 7.1E-11 1.5E-15 128.7 12.5 278 615-901 727-1032(1034)
262 COG5354 Uncharacterized protei 99.2 2.5E-09 5.4E-14 117.0 24.0 274 617-903 26-346 (561)
263 TIGR03300 assembly_YfgL outer 99.2 9.7E-09 2.1E-13 116.9 29.8 253 634-903 104-377 (377)
264 COG4946 Uncharacterized protei 99.2 2.2E-08 4.7E-13 108.5 28.9 285 599-894 203-507 (668)
265 KOG4594 Sequence-specific sing 99.2 1.5E-11 3.3E-16 124.1 4.2 66 4-70 12-77 (354)
266 COG2706 3-carboxymuconate cycl 99.2 6.7E-08 1.4E-12 102.7 30.8 259 644-902 15-318 (346)
267 KOG2314 Translation initiation 99.1 1.1E-08 2.4E-13 112.7 25.2 270 625-903 212-523 (698)
268 KOG0280 Uncharacterized conser 99.1 1.6E-09 3.4E-14 111.2 17.2 196 625-820 123-334 (339)
269 KOG1354 Serine/threonine prote 99.1 1.4E-09 3.1E-14 113.4 17.0 238 664-903 24-357 (433)
270 TIGR03300 assembly_YfgL outer 99.1 2.6E-08 5.7E-13 113.3 27.9 252 635-903 65-336 (377)
271 PF04762 IKI3: IKI3 family; I 99.1 6.3E-08 1.4E-12 120.3 32.9 280 621-903 73-454 (928)
272 KOG0974 WD-repeat protein WDR6 99.1 7.9E-09 1.7E-13 121.8 23.4 194 623-821 87-290 (967)
273 COG5170 CDC55 Serine/threonine 99.1 1.7E-09 3.7E-14 111.2 14.8 237 622-862 25-365 (460)
274 KOG4547 WD40 repeat-containing 99.1 4.3E-09 9.4E-14 117.5 18.4 201 675-902 3-217 (541)
275 KOG1064 RAVE (regulator of V-A 99.1 9.4E-10 2E-14 134.3 13.5 208 677-903 2180-2396(2439)
276 PLN02919 haloacid dehalogenase 99.1 1.3E-07 2.9E-12 119.6 33.5 239 627-868 571-892 (1057)
277 PLN02919 haloacid dehalogenase 99.1 1.1E-07 2.5E-12 120.2 32.6 232 669-903 571-886 (1057)
278 KOG1912 WD40 repeat protein [G 99.0 5.4E-08 1.2E-12 110.9 23.2 213 606-819 38-304 (1062)
279 PRK04043 tolB translocation pr 99.0 1.6E-07 3.4E-12 107.7 26.7 190 625-819 189-400 (419)
280 KOG1064 RAVE (regulator of V-A 99.0 3.2E-09 6.9E-14 129.9 12.7 189 618-821 2203-2400(2439)
281 KOG0309 Conserved WD40 repeat- 99.0 2.3E-09 5E-14 121.0 10.1 218 603-820 94-340 (1081)
282 PRK04043 tolB translocation pr 98.9 5.4E-07 1.2E-11 103.3 29.9 224 645-880 169-416 (419)
283 COG4946 Uncharacterized protei 98.9 1E-06 2.2E-11 95.8 29.4 137 761-903 332-475 (668)
284 KOG1832 HIV-1 Vpr-binding prot 98.9 1E-09 2.2E-14 125.7 6.1 262 612-893 1090-1377(1516)
285 KOG4532 WD40-like repeat conta 98.9 2.9E-07 6.4E-12 93.6 21.2 221 676-896 83-323 (344)
286 KOG1912 WD40 repeat protein [G 98.9 1.1E-07 2.5E-12 108.4 19.6 237 623-865 15-305 (1062)
287 PF04762 IKI3: IKI3 family; I 98.8 1.8E-06 3.8E-11 107.6 31.0 274 624-902 22-376 (928)
288 PF13360 PQQ_2: PQQ-like domai 98.8 1.6E-06 3.4E-11 91.7 26.6 213 644-869 2-235 (238)
289 PRK11138 outer membrane biogen 98.8 1.4E-06 2.9E-11 99.9 27.4 252 635-903 120-392 (394)
290 PF08450 SGL: SMP-30/Gluconola 98.8 8.2E-06 1.8E-10 87.0 30.5 216 669-893 3-243 (246)
291 KOG4190 Uncharacterized conser 98.8 7.8E-09 1.7E-13 113.1 6.7 174 658-869 728-911 (1034)
292 PF08450 SGL: SMP-30/Gluconola 98.8 1.9E-05 4.2E-10 84.2 32.5 214 628-853 4-244 (246)
293 KOG1645 RING-finger-containing 98.8 3.4E-07 7.5E-12 97.9 18.1 249 647-903 175-459 (463)
294 KOG0882 Cyclophilin-related pe 98.8 1.9E-07 4.1E-12 101.0 16.2 250 621-873 7-314 (558)
295 KOG1409 Uncharacterized conser 98.8 9.4E-08 2E-12 100.2 13.4 204 699-903 15-268 (404)
296 PF15492 Nbas_N: Neuroblastoma 98.7 4.7E-06 1E-10 86.5 25.0 224 629-903 3-257 (282)
297 COG5170 CDC55 Serine/threonine 98.7 6.7E-08 1.5E-12 99.7 11.4 234 664-903 25-307 (460)
298 KOG2041 WD40 repeat protein [G 98.7 1.9E-07 4.1E-12 105.4 15.1 230 664-896 13-279 (1189)
299 KOG4532 WD40-like repeat conta 98.7 1.4E-06 2.9E-11 88.8 19.6 196 686-888 51-263 (344)
300 PRK11138 outer membrane biogen 98.7 2.9E-06 6.3E-11 97.2 25.2 253 635-903 69-351 (394)
301 PF07433 DUF1513: Protein of u 98.7 1.5E-05 3.3E-10 85.2 27.8 246 625-896 6-277 (305)
302 KOG3914 WD repeat protein WDR4 98.7 1.5E-07 3.3E-12 100.9 11.5 122 624-748 111-232 (390)
303 KOG1832 HIV-1 Vpr-binding prot 98.6 2E-08 4.4E-13 115.3 4.6 201 654-869 1090-1296(1516)
304 KOG1645 RING-finger-containing 98.6 1.2E-06 2.5E-11 94.0 17.1 245 612-864 182-461 (463)
305 KOG2695 WD40 repeat protein [G 98.6 1.1E-07 2.5E-12 99.6 9.4 147 639-788 228-386 (425)
306 KOG4714 Nucleoporin [Nuclear s 98.6 6.3E-07 1.4E-11 90.9 13.4 165 614-779 80-255 (319)
307 PF13360 PQQ_2: PQQ-like domai 98.5 1.7E-05 3.6E-10 83.8 23.5 208 686-903 2-228 (238)
308 KOG0882 Cyclophilin-related pe 98.5 1.1E-06 2.4E-11 95.1 13.6 207 613-821 43-307 (558)
309 PF04053 Coatomer_WDAD: Coatom 98.5 2.1E-05 4.5E-10 90.1 24.9 222 663-902 30-259 (443)
310 KOG1275 PAB-dependent poly(A) 98.5 3.7E-06 8E-11 98.1 18.6 175 723-903 149-340 (1118)
311 KOG4714 Nucleoporin [Nuclear s 98.5 1.6E-06 3.5E-11 88.0 13.8 160 660-820 84-255 (319)
312 KOG3914 WD repeat protein WDR4 98.5 2.7E-06 5.9E-11 91.5 16.3 158 625-787 64-232 (390)
313 PF00930 DPPIV_N: Dipeptidyl p 98.5 8.3E-05 1.8E-09 83.8 29.2 258 632-895 1-347 (353)
314 KOG1920 IkappaB kinase complex 98.5 2.5E-05 5.5E-10 94.3 25.6 241 622-869 67-327 (1265)
315 KOG4649 PQQ (pyrrolo-quinoline 98.5 8.9E-05 1.9E-09 75.6 25.5 256 634-903 62-349 (354)
316 cd00216 PQQ_DH Dehydrogenases 98.5 6.9E-05 1.5E-09 88.2 27.9 256 635-903 61-422 (488)
317 PF15492 Nbas_N: Neuroblastoma 98.4 4.9E-05 1.1E-09 79.1 22.1 188 625-821 45-261 (282)
318 KOG1275 PAB-dependent poly(A) 98.4 5.5E-06 1.2E-10 96.7 16.5 183 676-863 146-341 (1118)
319 PF14583 Pectate_lyase22: Olig 98.4 0.0002 4.4E-09 79.0 27.8 268 629-902 41-378 (386)
320 PRK02888 nitrous-oxide reducta 98.4 5.7E-05 1.2E-09 87.7 24.0 255 633-894 139-450 (635)
321 PF00400 WD40: WD domain, G-be 98.4 1.1E-06 2.4E-11 64.6 6.7 39 613-651 1-39 (39)
322 KOG2114 Vacuolar assembly/sort 98.4 6.9E-05 1.5E-09 87.6 24.0 203 672-879 30-260 (933)
323 KOG2066 Vacuolar assembly/sort 98.3 1.5E-05 3.2E-10 92.5 17.1 180 623-819 39-233 (846)
324 KOG2114 Vacuolar assembly/sort 98.3 0.00022 4.8E-09 83.5 25.5 192 625-820 27-244 (933)
325 PF02897 Peptidase_S9_N: Proly 98.3 0.0011 2.4E-08 76.4 31.8 239 626-871 126-411 (414)
326 KOG3621 WD40 repeat-containing 98.2 0.00013 2.9E-09 83.8 22.4 118 622-740 32-155 (726)
327 PF07433 DUF1513: Protein of u 98.2 0.00025 5.5E-09 76.0 23.3 192 709-903 5-245 (305)
328 KOG1008 Uncharacterized conser 98.2 7.9E-07 1.7E-11 100.1 4.2 198 622-820 55-276 (783)
329 PF08513 LisH: LisH; InterPro 98.2 1.4E-06 3E-11 58.1 3.5 27 10-36 1-27 (27)
330 PF11768 DUF3312: Protein of u 98.2 0.0014 3.1E-08 74.6 29.7 90 812-903 237-327 (545)
331 PF00400 WD40: WD domain, G-be 98.2 2.9E-06 6.2E-11 62.3 5.5 39 655-693 1-39 (39)
332 KOG2695 WD40 repeat protein [G 98.2 3.6E-06 7.7E-11 88.6 8.1 159 725-884 228-401 (425)
333 KOG2066 Vacuolar assembly/sort 98.2 8.3E-05 1.8E-09 86.5 19.4 183 665-864 39-233 (846)
334 COG3391 Uncharacterized conser 98.2 0.0021 4.6E-08 73.1 30.5 252 647-901 13-279 (381)
335 COG0823 TolB Periplasmic compo 98.2 0.00023 4.9E-09 81.5 22.3 191 698-893 182-387 (425)
336 PF06433 Me-amine-dh_H: Methyl 98.1 0.0025 5.4E-08 69.3 28.4 255 645-903 17-318 (342)
337 KOG3617 WD40 and TPR repeat-co 98.1 3.9E-05 8.5E-10 88.7 14.6 109 627-739 19-131 (1416)
338 PRK02888 nitrous-oxide reducta 98.1 0.00084 1.8E-08 78.3 25.6 182 716-903 200-402 (635)
339 cd00216 PQQ_DH Dehydrogenases 98.1 0.0014 3.1E-08 77.1 28.1 242 636-888 111-450 (488)
340 KOG1920 IkappaB kinase complex 98.1 0.00044 9.5E-09 84.0 23.2 227 664-902 67-319 (1265)
341 PF06433 Me-amine-dh_H: Methyl 98.0 0.007 1.5E-07 65.9 29.3 236 628-872 40-328 (342)
342 PF04053 Coatomer_WDAD: Coatom 98.0 0.0014 3.1E-08 75.3 25.1 221 621-865 30-263 (443)
343 COG3391 Uncharacterized conser 98.0 0.0018 3.8E-08 73.8 25.8 219 624-845 74-309 (381)
344 KOG4649 PQQ (pyrrolo-quinoline 98.0 0.0049 1.1E-07 63.3 25.6 141 635-780 23-167 (354)
345 COG0823 TolB Periplasmic compo 98.0 0.00067 1.5E-08 77.7 22.2 201 647-856 175-391 (425)
346 PF06977 SdiA-regulated: SdiA- 98.0 0.0036 7.8E-08 66.2 25.6 198 616-816 14-247 (248)
347 PF06977 SdiA-regulated: SdiA- 98.0 0.0018 4E-08 68.4 23.4 197 703-902 16-247 (248)
348 KOG3617 WD40 and TPR repeat-co 98.0 5.5E-05 1.2E-09 87.6 12.3 259 626-892 62-372 (1416)
349 PF08596 Lgl_C: Lethal giant l 98.0 0.0018 4E-08 73.4 24.5 259 625-896 3-327 (395)
350 PF00930 DPPIV_N: Dipeptidyl p 97.9 0.0026 5.6E-08 71.7 25.2 227 623-854 42-347 (353)
351 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.9 0.011 2.4E-07 70.1 30.0 184 635-823 69-337 (527)
352 PF00780 CNH: CNH domain; Int 97.9 0.01 2.2E-07 64.2 27.7 221 633-869 5-260 (275)
353 PF00780 CNH: CNH domain; Int 97.8 0.0058 1.3E-07 66.1 24.6 215 675-903 5-253 (275)
354 COG5276 Uncharacterized conser 97.8 0.051 1.1E-06 57.1 29.3 271 623-903 86-367 (370)
355 PF04841 Vps16_N: Vps16, N-ter 97.8 0.023 5E-07 65.3 29.8 189 646-846 62-271 (410)
356 KOG1008 Uncharacterized conser 97.8 8.3E-06 1.8E-10 92.2 1.6 196 666-865 57-276 (783)
357 PF11768 DUF3312: Protein of u 97.8 0.00015 3.2E-09 82.5 11.4 74 621-696 257-330 (545)
358 PF03178 CPSF_A: CPSF A subuni 97.7 0.004 8.6E-08 69.2 22.3 206 688-901 3-261 (321)
359 COG3386 Gluconolactonase [Carb 97.7 0.013 2.8E-07 64.1 24.6 215 671-893 30-273 (307)
360 PF02897 Peptidase_S9_N: Proly 97.7 0.024 5.1E-07 65.4 28.2 217 668-888 126-383 (414)
361 PF03178 CPSF_A: CPSF A subuni 97.7 0.015 3.2E-07 64.7 25.3 211 646-861 3-262 (321)
362 PF14583 Pectate_lyase22: Olig 97.7 0.0087 1.9E-07 66.3 22.6 240 651-896 16-303 (386)
363 PRK10115 protease 2; Provision 97.6 0.099 2.2E-06 64.1 33.8 237 625-869 128-399 (686)
364 PF04841 Vps16_N: Vps16, N-ter 97.6 0.019 4.1E-07 65.9 25.1 188 688-888 62-272 (410)
365 PF08596 Lgl_C: Lethal giant l 97.6 0.00085 1.8E-08 76.1 13.8 221 612-855 75-327 (395)
366 PF08553 VID27: VID27 cytoplas 97.5 0.013 2.7E-07 71.2 23.7 207 684-892 501-759 (794)
367 KOG4640 Anaphase-promoting com 97.5 0.00037 8.1E-09 79.3 9.6 98 620-718 17-115 (665)
368 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.4 0.095 2.1E-06 62.2 29.3 146 636-783 121-338 (527)
369 PF14727 PHTB1_N: PTHB1 N-term 97.4 0.25 5.4E-06 56.3 29.9 260 635-901 37-356 (418)
370 PF05694 SBP56: 56kDa selenium 97.3 0.07 1.5E-06 59.8 23.8 219 634-854 86-393 (461)
371 KOG2395 Protein involved in va 97.3 0.0053 1.1E-07 68.9 15.0 127 766-896 352-492 (644)
372 PRK13616 lipoprotein LpqB; Pro 97.3 0.02 4.4E-07 68.4 21.2 210 644-860 328-564 (591)
373 KOG1897 Damage-specific DNA bi 97.2 0.33 7.2E-06 58.8 29.3 271 623-901 583-894 (1096)
374 PRK10115 protease 2; Provision 97.2 0.19 4.2E-06 61.6 28.6 198 666-872 127-354 (686)
375 smart00320 WD40 WD40 repeats. 97.2 0.0011 2.3E-08 46.5 5.6 38 614-651 3-40 (40)
376 KOG4499 Ca2+-binding protein R 97.1 0.096 2.1E-06 53.4 20.7 203 679-884 29-262 (310)
377 PF08553 VID27: VID27 cytoplas 97.1 0.0069 1.5E-07 73.4 15.2 127 768-896 502-639 (794)
378 PF14783 BBS2_Mid: Ciliary BBS 97.1 0.016 3.5E-07 52.6 14.0 101 626-734 2-109 (111)
379 PF14655 RAB3GAP2_N: Rab3 GTPa 97.1 0.29 6.2E-06 55.7 27.0 88 628-717 6-117 (415)
380 PF15390 DUF4613: Domain of un 97.1 0.11 2.4E-06 59.7 23.2 119 623-741 56-188 (671)
381 PF05096 Glu_cyclase_2: Glutam 97.1 0.24 5.1E-06 52.5 24.2 192 657-855 35-251 (264)
382 KOG3621 WD40 repeat-containing 97.1 0.018 3.9E-07 66.8 17.0 135 664-799 32-179 (726)
383 PF05096 Glu_cyclase_2: Glutam 97.1 0.41 9E-06 50.7 25.7 192 612-811 32-251 (264)
384 COG3490 Uncharacterized protei 97.1 0.093 2E-06 55.0 20.3 229 627-862 71-346 (366)
385 PRK13616 lipoprotein LpqB; Pro 97.0 0.064 1.4E-06 64.2 22.1 206 686-900 328-563 (591)
386 PF07995 GSDH: Glucose / Sorbo 97.0 0.37 7.9E-06 53.8 26.2 66 835-900 253-330 (331)
387 smart00320 WD40 WD40 repeats. 96.9 0.0022 4.8E-08 44.8 5.6 39 655-693 2-40 (40)
388 PHA02713 hypothetical protein; 96.9 0.054 1.2E-06 64.8 20.6 214 646-869 273-538 (557)
389 PF14783 BBS2_Mid: Ciliary BBS 96.9 0.05 1.1E-06 49.5 15.3 100 793-901 2-110 (111)
390 COG3386 Gluconolactonase [Carb 96.9 0.081 1.8E-06 58.0 20.0 185 714-903 30-241 (307)
391 COG3204 Uncharacterized protei 96.8 0.31 6.8E-06 51.7 22.1 191 619-811 81-304 (316)
392 KOG4441 Proteins containing BT 96.8 0.058 1.3E-06 64.5 18.7 215 677-898 285-534 (571)
393 KOG2395 Protein involved in va 96.7 0.036 7.9E-07 62.4 15.1 137 680-819 349-500 (644)
394 KOG4499 Ca2+-binding protein R 96.7 0.18 3.9E-06 51.5 18.4 133 665-800 108-263 (310)
395 COG3204 Uncharacterized protei 96.7 0.3 6.5E-06 51.8 20.6 188 704-892 81-300 (316)
396 KOG4441 Proteins containing BT 96.6 0.093 2E-06 62.8 19.2 229 633-869 283-551 (571)
397 PF10647 Gmad1: Lipoprotein Lp 96.5 0.7 1.5E-05 49.4 23.4 184 710-893 25-226 (253)
398 TIGR03074 PQQ_membr_DH membran 96.5 0.49 1.1E-05 58.3 24.5 112 635-749 194-354 (764)
399 COG5276 Uncharacterized conser 96.5 1.5 3.3E-05 46.5 25.6 238 621-865 39-286 (370)
400 KOG2079 Vacuolar assembly/sort 96.5 0.047 1E-06 66.3 14.8 101 634-738 98-202 (1206)
401 KOG1897 Damage-specific DNA bi 96.4 1.8 3.9E-05 52.8 27.6 214 679-901 686-938 (1096)
402 PHA02713 hypothetical protein; 96.4 0.22 4.8E-06 59.6 20.9 176 720-902 303-530 (557)
403 KOG2444 WD40 repeat protein [G 96.4 0.0037 8.1E-08 63.4 4.6 139 679-821 32-179 (238)
404 PF14870 PSII_BNR: Photosynthe 96.4 2 4.4E-05 46.9 27.0 267 623-902 16-301 (302)
405 PRK13684 Ycf48-like protein; P 96.4 2.3 5.1E-05 47.4 29.2 267 623-903 45-329 (334)
406 TIGR02604 Piru_Ver_Nterm putat 96.3 2 4.4E-05 48.6 27.0 102 624-727 14-142 (367)
407 PLN00033 photosystem II stabil 96.3 2.9 6.2E-05 47.7 34.5 110 789-902 279-396 (398)
408 KOG4640 Anaphase-promoting com 96.3 0.017 3.8E-07 66.2 9.6 79 665-746 20-99 (665)
409 PF14727 PHTB1_N: PTHB1 N-term 96.2 3.3 7.1E-05 47.4 28.7 222 677-903 37-316 (418)
410 COG4257 Vgb Streptogramin lyas 96.2 2.1 4.6E-05 45.0 23.1 238 625-873 63-314 (353)
411 PF02333 Phytase: Phytase; In 96.2 1.8 3.9E-05 48.5 24.3 186 633-821 66-292 (381)
412 smart00667 LisH Lissencephaly 96.1 0.0086 1.9E-07 42.1 4.0 31 9-39 3-33 (34)
413 COG3490 Uncharacterized protei 96.1 0.49 1.1E-05 49.9 17.9 169 717-895 44-245 (366)
414 KOG2377 Uncharacterized conser 96.0 0.39 8.4E-06 53.5 17.9 120 622-743 65-189 (657)
415 PF14870 PSII_BNR: Photosynthe 96.0 3.2 6.9E-05 45.4 28.5 220 665-896 16-253 (302)
416 COG1520 FOG: WD40-like repeat 95.9 4.1 8.9E-05 46.1 30.2 149 633-786 67-225 (370)
417 PF10214 Rrn6: RNA polymerase 95.7 3.7 7.9E-05 51.3 27.1 177 663-865 77-277 (765)
418 TIGR03074 PQQ_membr_DH membran 95.6 1.1 2.5E-05 55.1 22.0 66 723-788 262-354 (764)
419 KOG2444 WD40 repeat protein [G 95.5 0.031 6.8E-07 56.9 6.6 134 639-780 34-168 (238)
420 PLN02153 epithiospecifier prot 95.4 1.4 3.1E-05 49.3 20.6 174 721-897 86-325 (341)
421 PF15390 DUF4613: Domain of un 95.4 1 2.3E-05 52.0 18.8 146 665-820 19-187 (671)
422 PHA03098 kelch-like protein; P 95.4 0.6 1.3E-05 55.8 18.4 154 721-878 343-525 (534)
423 COG4257 Vgb Streptogramin lyas 95.3 3.7 8.1E-05 43.3 20.6 209 668-890 64-290 (353)
424 smart00036 CNH Domain found in 95.2 6.2 0.00013 43.4 28.7 229 634-872 12-278 (302)
425 KOG2079 Vacuolar assembly/sort 95.2 0.19 4.2E-06 61.3 12.8 72 621-694 128-202 (1206)
426 KOG1916 Nuclear protein, conta 95.1 0.0079 1.7E-07 71.1 0.9 121 617-741 126-257 (1283)
427 PF10168 Nup88: Nuclear pore c 95.1 4.3 9.2E-05 49.9 24.1 30 665-695 84-113 (717)
428 COG3823 Glutamine cyclotransfe 95.0 0.39 8.5E-06 48.4 12.3 176 676-853 55-247 (262)
429 KOG3630 Nuclear pore complex, 94.9 0.2 4.3E-06 61.4 11.9 142 667-809 102-262 (1405)
430 PHA03098 kelch-like protein; P 94.9 0.72 1.6E-05 55.1 17.2 181 633-821 293-513 (534)
431 TIGR02604 Piru_Ver_Nterm putat 94.9 0.97 2.1E-05 51.2 17.2 105 790-896 71-204 (367)
432 PF10168 Nup88: Nuclear pore c 94.9 1.6 3.5E-05 53.4 19.9 26 624-649 85-110 (717)
433 PF05694 SBP56: 56kDa selenium 94.8 9.3 0.0002 43.4 30.3 218 676-894 86-392 (461)
434 COG5167 VID27 Protein involved 94.7 1.1 2.3E-05 50.8 16.1 141 676-820 478-633 (776)
435 PF10647 Gmad1: Lipoprotein Lp 94.7 4.9 0.00011 42.9 21.2 145 625-770 25-187 (253)
436 PF12234 Rav1p_C: RAVE protein 94.7 0.66 1.4E-05 55.3 15.5 125 612-739 18-156 (631)
437 PRK13684 Ycf48-like protein; P 94.7 7.7 0.00017 43.3 23.5 147 665-817 172-329 (334)
438 PLN02193 nitrile-specifier pro 94.7 12 0.00025 44.0 28.9 171 721-896 176-387 (470)
439 PF14761 HPS3_N: Hermansky-Pud 94.5 2.9 6.4E-05 42.8 17.6 49 636-685 29-79 (215)
440 PF03022 MRJP: Major royal jel 94.5 3.2 7E-05 45.2 19.2 186 688-894 35-254 (287)
441 PF12894 Apc4_WD40: Anaphase-p 94.3 0.12 2.7E-06 39.5 5.6 33 623-656 11-43 (47)
442 COG1520 FOG: WD40-like repeat 94.2 12 0.00026 42.3 28.7 186 679-869 70-273 (370)
443 TIGR03118 PEPCTERM_chp_1 conse 94.1 10 0.00022 41.0 23.9 196 625-821 24-281 (336)
444 TIGR03548 mutarot_permut cycli 93.8 4.6 0.0001 44.7 19.5 100 721-821 73-196 (323)
445 KOG2280 Vacuolar assembly/sort 93.6 8 0.00017 46.3 20.8 190 623-821 43-248 (829)
446 PF10433 MMS1_N: Mono-function 93.5 20 0.00044 42.4 27.8 245 632-885 219-503 (504)
447 KOG2247 WD40 repeat-containing 93.4 0.026 5.7E-07 63.0 0.6 139 668-809 37-178 (615)
448 PF07995 GSDH: Glucose / Sorbo 93.4 8.6 0.00019 42.9 20.6 77 782-859 245-330 (331)
449 PF13449 Phytase-like: Esteras 93.4 14 0.00031 41.0 22.3 141 709-851 20-231 (326)
450 KOG1916 Nuclear protein, conta 93.3 0.052 1.1E-06 64.6 2.7 119 625-744 185-328 (1283)
451 COG1770 PtrB Protease II [Amin 93.3 23 0.00049 42.3 23.9 198 667-869 130-353 (682)
452 KOG2280 Vacuolar assembly/sort 93.1 6.3 0.00014 47.1 19.1 174 687-869 64-251 (829)
453 PF10395 Utp8: Utp8 family; I 93.1 21 0.00046 42.9 23.7 152 747-903 128-303 (670)
454 TIGR03547 muta_rot_YjhT mutatr 92.8 13 0.00028 41.6 21.3 41 857-897 291-332 (346)
455 PF14761 HPS3_N: Hermansky-Pud 92.8 3.8 8.2E-05 42.0 14.8 55 756-811 23-80 (215)
456 PLN02193 nitrile-specifier pro 92.8 10 0.00022 44.5 21.0 148 720-871 228-417 (470)
457 COG3292 Predicted periplasmic 92.7 5.5 0.00012 46.1 17.3 268 623-901 164-443 (671)
458 PHA02790 Kelch-like protein; P 92.7 2.3 4.9E-05 50.1 15.4 176 635-820 272-471 (480)
459 COG3823 Glutamine cyclotransfe 92.6 7.3 0.00016 39.6 16.1 168 634-808 55-247 (262)
460 PF12234 Rav1p_C: RAVE protein 92.5 3.2 6.8E-05 49.7 16.0 109 791-903 30-154 (631)
461 PRK14131 N-acetylneuraminic ac 92.3 16 0.00034 41.6 21.1 14 732-745 190-203 (376)
462 PF12894 Apc4_WD40: Anaphase-p 92.3 0.41 8.8E-06 36.7 5.5 31 665-695 11-41 (47)
463 COG4247 Phy 3-phytase (myo-ino 92.2 17 0.00036 38.1 21.2 190 626-818 58-287 (364)
464 PLN02153 epithiospecifier prot 92.1 8.3 0.00018 43.1 18.5 39 856-895 217-260 (341)
465 KOG3630 Nuclear pore complex, 92.1 1.3 2.7E-05 54.8 11.9 121 770-893 124-261 (1405)
466 PRK14131 N-acetylneuraminic ac 92.0 12 0.00026 42.5 19.7 39 858-896 314-353 (376)
467 PF10395 Utp8: Utp8 family; I 91.9 35 0.00076 41.1 24.6 238 627-869 31-310 (670)
468 KOG2377 Uncharacterized conser 91.8 11 0.00025 42.4 17.9 115 663-780 64-187 (657)
469 PF10433 MMS1_N: Mono-function 91.7 20 0.00044 42.4 22.0 224 674-902 219-473 (504)
470 PF08801 Nucleoporin_N: Nup133 91.4 8.8 0.00019 44.3 18.2 64 623-696 26-97 (422)
471 TIGR03548 mutarot_permut cycli 91.3 13 0.00027 41.3 18.7 107 634-744 72-199 (323)
472 COG5167 VID27 Protein involved 91.1 2.3 5.1E-05 48.2 12.0 128 766-896 486-624 (776)
473 KOG4659 Uncharacterized conser 91.1 51 0.0011 42.2 23.7 81 613-696 337-428 (1899)
474 PF14781 BBS2_N: Ciliary BBSom 91.0 6.7 0.00014 37.1 13.2 115 669-785 2-132 (136)
475 PHA02790 Kelch-like protein; P 90.8 7.9 0.00017 45.6 17.2 167 721-896 272-456 (480)
476 KOG1900 Nuclear pore complex, 90.7 1.9 4.1E-05 54.3 11.9 160 643-821 97-274 (1311)
477 KOG1983 Tomosyn and related SN 90.6 5.3 0.00012 51.0 16.3 227 624-868 36-268 (993)
478 PF08728 CRT10: CRT10; InterP 90.6 5.9 0.00013 48.0 15.6 74 790-863 163-245 (717)
479 PF07250 Glyoxal_oxid_N: Glyox 90.6 4.5 9.7E-05 42.8 13.2 129 772-900 48-194 (243)
480 KOG4460 Nuclear pore complex, 90.6 2.4 5.2E-05 48.3 11.5 95 751-869 106-203 (741)
481 KOG1898 Splicing factor 3b, su 90.5 11 0.00024 46.7 17.6 59 686-748 911-971 (1205)
482 PF14781 BBS2_N: Ciliary BBSom 90.0 8.4 0.00018 36.5 12.8 76 790-869 47-130 (136)
483 PF14655 RAB3GAP2_N: Rab3 GTPa 89.6 3.3 7.1E-05 47.3 12.0 52 658-710 300-351 (415)
484 TIGR03606 non_repeat_PQQ dehyd 89.5 48 0.001 38.5 31.8 59 619-677 25-90 (454)
485 COG1506 DAP2 Dipeptidyl aminop 89.4 60 0.0013 39.6 23.7 62 660-725 54-117 (620)
486 KOG2109 WD40 repeat protein [G 89.2 0.88 1.9E-05 53.1 7.0 77 612-688 304-391 (788)
487 PF07569 Hira: TUP1-like enhan 88.9 2.2 4.9E-05 44.5 9.4 61 842-903 18-93 (219)
488 KOG2247 WD40 repeat-containing 88.9 0.06 1.3E-06 60.3 -2.4 140 753-898 39-181 (615)
489 PF05935 Arylsulfotrans: Aryls 88.8 17 0.00037 42.8 17.7 142 643-790 126-313 (477)
490 COG3292 Predicted periplasmic 88.5 39 0.00085 39.5 19.1 258 625-892 207-480 (671)
491 PLN00033 photosystem II stabil 88.4 52 0.0011 37.6 25.4 108 750-861 282-396 (398)
492 COG5290 IkappaB kinase complex 88.2 7 0.00015 46.7 13.3 93 752-848 250-350 (1243)
493 TIGR03118 PEPCTERM_chp_1 conse 87.9 44 0.00096 36.2 23.9 214 667-885 24-307 (336)
494 smart00036 CNH Domain found in 87.7 48 0.001 36.4 24.9 195 622-821 41-272 (302)
495 PF10214 Rrn6: RNA polymerase 87.5 88 0.0019 39.3 26.5 72 622-694 78-175 (765)
496 PF10313 DUF2415: Uncharacteri 87.5 2.1 4.5E-05 32.0 5.6 31 624-654 1-34 (43)
497 PF08728 CRT10: CRT10; InterP 87.5 5.3 0.00011 48.3 12.3 112 626-738 103-245 (717)
498 PF07569 Hira: TUP1-like enhan 87.2 4.1 8.9E-05 42.5 10.1 67 754-820 16-96 (219)
499 KOG3616 Selective LIM binding 87.0 11 0.00024 44.8 13.8 218 623-876 14-237 (1636)
500 TIGR03547 muta_rot_YjhT mutatr 87.0 31 0.00067 38.5 17.9 182 628-811 57-331 (346)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=8.9e-45 Score=375.51 Aligned_cols=311 Identities=26% Similarity=0.443 Sum_probs=275.7
Q ss_pred cceEEEEeCCCceecc---CCCeeeeCCcchhhhhhccccccCCCCCceEEeeecCCCCCcCCCCcccccccCcceeeee
Q 002591 541 KPLMMFGTDGAGTLTS---PSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEAN 617 (903)
Q Consensus 541 ~~~i~~s~dg~~~~~~---~~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~ 617 (903)
.-++.|+|+|.+++++ ..++|||+.+- .+..
T Consensus 118 Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te----------------------------------------------Tp~~ 151 (480)
T KOG0271|consen 118 VLSVQFSPTGSRLVTGSGDTTVRLWDLDTE----------------------------------------------TPLF 151 (480)
T ss_pred EEEEEecCCCceEEecCCCceEEeeccCCC----------------------------------------------Ccce
Confidence 3577889998887763 34477776532 3556
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee-EEeccCCCCeEEEEECC-----CCCEEEEEeCCCcEEE
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSK-TNLEEHSSLITDVRFSP-----SMPRLATSSFDKTVRV 691 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~-~~l~~h~~~V~~l~fsp-----dg~~Lasgs~Dg~I~I 691 (903)
+.++|..-|.||+|+|||+.||+|+.||+|++||.++++.+ ..+.+|...|++++|.| ..++||+++.||.|+|
T Consensus 152 t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrI 231 (480)
T KOG0271|consen 152 TCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRI 231 (480)
T ss_pred eecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEE
Confidence 78899999999999999999999999999999999987654 67899999999999966 5679999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCc---eeEE-----------Ee
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGT---AQMR-----------FQ 757 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~---~~v~-----------~s 757 (903)
||+.. +.++..+.+|+.+|+|++|-- ..+|++++.|++|++|+...|++.+.++++. +.++ |.
T Consensus 232 Wd~~~-~~~~~~lsgHT~~VTCvrwGG--~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~ 308 (480)
T KOG0271|consen 232 WDTKL-GTCVRTLSGHTASVTCVRWGG--EGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFD 308 (480)
T ss_pred EEccC-ceEEEEeccCccceEEEEEcC--CceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccc
Confidence 99987 889999999999999999974 4489999999999999999999988887753 3333 33
Q ss_pred cCCC-------------------------EEEEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC
Q 002591 758 PHLG-------------------------RYLAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED 811 (903)
Q Consensus 758 p~~~-------------------------~ll~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d 811 (903)
+.+. .+++++.|.++.+|+.... +++..+.+|...|+.+.|+||+++||+++-|
T Consensus 309 ~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFD 388 (480)
T KOG0271|consen 309 HTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFD 388 (480)
T ss_pred cccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecc
Confidence 3333 4899999999999997655 5888899999999999999999999999999
Q ss_pred -eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCE
Q 002591 812 -SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGY 889 (903)
Q Consensus 812 -~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~ 889 (903)
.|++||.+++ +.+..+.+|-..|+.++|+.|.+.|++|+.|.++++||+++.++. .+.+|.+.|.++.|+|||..
T Consensus 389 kSVkLW~g~tG---k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~r 465 (480)
T KOG0271|consen 389 KSVKLWDGRTG---KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQR 465 (480)
T ss_pred cceeeeeCCCc---chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCce
Confidence 9999999998 788899999999999999999999999999999999999999988 88999999999999999999
Q ss_pred EEEEecCCcEEEcC
Q 002591 890 VASASHDKFVKLWK 903 (903)
Q Consensus 890 LaSgs~DG~I~IWd 903 (903)
+++|+.|..++||.
T Consensus 466 V~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 466 VASGGKDKVLRLWR 479 (480)
T ss_pred eecCCCceEEEeec
Confidence 99999999999995
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.8e-43 Score=363.44 Aligned_cols=289 Identities=22% Similarity=0.385 Sum_probs=264.0
Q ss_pred eeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 002591 613 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 692 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IW 692 (903)
.++...+.+|.++|.|+.|+|+|.+||+|+.|.++++||+.+..+.++.++|...|.||+|+|||+.||+|+.||+|++|
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lw 184 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLW 184 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEe
Confidence 45566789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEeccCCCceEEEEecCC----CCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCC--CEEEEE
Q 002591 693 DADNPGYSLRTFMGHSASVMSLDFHPN----KDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHL--GRYLAA 766 (903)
Q Consensus 693 Dl~~~~~~~~~~~~h~~~V~sl~fsp~----~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~--~~ll~~ 766 (903)
|.+++....+.+.+|...|++++|.|- ..++|++++.||.|+|||+..+.|+..+.++...+.....| +.++++
T Consensus 185 dpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gliySg 264 (480)
T KOG0271|consen 185 DPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLIYSG 264 (480)
T ss_pred cCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceEEec
Confidence 999988888999999999999999874 23478899999999999999999999998876655554444 688889
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEc-----------CCCC-------------------------EEEEEeC
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPIDSVCWD-----------PSGE-------------------------LLASVSE 810 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~s-----------pdg~-------------------------~lasgs~ 810 (903)
+.|++|++|+...|++..++++|...|+.++.+ |.++ .+++|++
T Consensus 265 S~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsD 344 (480)
T KOG0271|consen 265 SQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSD 344 (480)
T ss_pred CCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecC
Confidence 999999999999999999999999999998876 3333 4999999
Q ss_pred C-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCC
Q 002591 811 D-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETG 888 (903)
Q Consensus 811 d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~ 888 (903)
| ++.+|+-... .+++..+.+|...|+.+.|+||+++|++++.|+.|++||.++|+.+ .+.+|-..|+.++|+.|.+
T Consensus 345 d~tlflW~p~~~--kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsR 422 (480)
T KOG0271|consen 345 DFTLFLWNPFKS--KKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSR 422 (480)
T ss_pred CceEEEeccccc--ccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCcc
Confidence 9 9999997543 3678888999999999999999999999999999999999999988 8899999999999999999
Q ss_pred EEEEEecCCcEEEcC
Q 002591 889 YVASASHDKFVKLWK 903 (903)
Q Consensus 889 ~LaSgs~DG~I~IWd 903 (903)
+|++||.|.+|++|+
T Consensus 423 LlVS~SkDsTLKvw~ 437 (480)
T KOG0271|consen 423 LLVSGSKDSTLKVWD 437 (480)
T ss_pred EEEEcCCCceEEEEE
Confidence 999999999999996
No 3
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=4.3e-41 Score=353.09 Aligned_cols=287 Identities=27% Similarity=0.441 Sum_probs=266.2
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCC--CCEEEEEeCCCcE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS--MPRLATSSFDKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspd--g~~Lasgs~Dg~I 689 (903)
.......--+.+.+|..+.|+.|++.||||+.+|.++||+..+...+.+|.+|...|.++.|+|. +..||+|+.||+|
T Consensus 164 ~~~l~~SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtv 243 (459)
T KOG0272|consen 164 SLELVCSQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTV 243 (459)
T ss_pred hhhhhhhhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCce
Confidence 33344444567889999999999999999999999999999999999999999999999999997 5689999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~ 766 (903)
++|++++ ...+..+.+|...|..++|+|+|.+ |+|++.|.+-++||++++..+...++ ++.+++|.++|..+++|
T Consensus 244 klw~~~~-e~~l~~l~gH~~RVs~VafHPsG~~-L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tG 321 (459)
T KOG0272|consen 244 KLWKLSQ-ETPLQDLEGHLARVSRVAFHPSGKF-LGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATG 321 (459)
T ss_pred eeeccCC-CcchhhhhcchhhheeeeecCCCce-eeecccccchhhcccccchhhHhhcccccccceeEecCCCceeecc
Confidence 9999997 6789999999999999999999885 55999999999999999987655554 57889999999999999
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeC-
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP- 844 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp- 844 (903)
+.|..-+|||+++++++..+.+|..+|.+|+|+|+|..||||+.| +++|||++.. .++..+..|.+.|+.+.|+|
T Consensus 322 GlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r---~~ly~ipAH~nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 322 GLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR---SELYTIPAHSNLVSQVKYSPQ 398 (459)
T ss_pred CccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccc---ccceecccccchhhheEeccc
Confidence 999999999999999999999999999999999999999999999 9999999876 56889999999999999998
Q ss_pred CCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 845 TYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 845 ~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.|.+|++++.|++++||...+..++ .+.+|++.|.++++++|+.+|+|++.|.+|++|.
T Consensus 399 ~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 399 EGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 7889999999999999999999988 8899999999999999999999999999999995
No 4
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=7.5e-39 Score=322.22 Aligned_cols=290 Identities=20% Similarity=0.371 Sum_probs=264.1
Q ss_pred cceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 002591 611 FSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 690 (903)
Q Consensus 611 ~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~ 690 (903)
..++..++|++|.++|+|+.|++|.++|++++.||++.|||.-+...+..++-....|..++|+|.+.++|+|+.|....
T Consensus 43 i~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Cs 122 (343)
T KOG0286|consen 43 IQMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCS 122 (343)
T ss_pred eeeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeE
Confidence 36778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCC--C---ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEec-CCC
Q 002591 691 VWDADNP--G---YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQP-HLG 761 (903)
Q Consensus 691 IWDl~~~--~---~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp-~~~ 761 (903)
||++.+. . ...+.+.+|++.+.|+.|..|+ .+ +|++.|.++.+||+++++.+..|.++ +..+.+.| +++
T Consensus 123 iy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~i-lT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 123 IYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HI-LTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred EEecccccccccceeeeeecCccceeEEEEEcCCC-ce-EecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 9999853 1 3457799999999999999864 34 49999999999999999999999875 56678899 889
Q ss_pred EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEE
Q 002591 762 RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSC 840 (903)
Q Consensus 762 ~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si 840 (903)
.|++++.|+..++||++.+.++..|.+|+..|++|+|.|+|.-|++|++| +.++||++...+... .........|+++
T Consensus 201 tFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~-ys~~~~~~gitSv 279 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAV-YSHDSIICGITSV 279 (343)
T ss_pred eEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEee-eccCcccCCceeE
Confidence 99999999999999999999999999999999999999999999999999 999999998744322 2233345679999
Q ss_pred EEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 841 VFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 841 ~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+|+..|++|++|..|..+.+||.-.++.+ .+.+|++.|+++..+|||.-|+|||.|.+||||.
T Consensus 280 ~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 280 AFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999999888887 8899999999999999999999999999999994
No 5
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=9.3e-37 Score=308.39 Aligned_cols=286 Identities=24% Similarity=0.420 Sum_probs=262.8
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD-TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~-t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWD 693 (903)
++..+.+|++.|+++.|+|+|.+||+|+.|..|.+|++. ..+....+++|.++|..+.|.+|++.|++++.|++|+.||
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD 118 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence 445677999999999999999999999999999999954 6677888999999999999999999999999999999999
Q ss_pred CCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe--ecCceeEEEecCCCEEEEEEcCCe
Q 002591 694 ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF--KGGTAQMRFQPHLGRYLAAAAENV 771 (903)
Q Consensus 694 l~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ll~~s~dg~ 771 (903)
+++ +++++.+++|...|.+++-...|..++++++.|+++++||+++..+++++ +.....+.|.-.+..+++++-|+.
T Consensus 119 ~~t-G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ 197 (338)
T KOG0265|consen 119 AET-GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGIDND 197 (338)
T ss_pred ccc-ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeeccccCc
Confidence 998 88999999999999999977778889999999999999999999999988 567888999999999999999999
Q ss_pred EEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCc-ceEEEeecCCC----ceEEEEEeCC
Q 002591 772 VSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEG-ECVHELSCNGN----KFHSCVFHPT 845 (903)
Q Consensus 772 I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~-~~i~~~~~~~~----~i~si~~sp~ 845 (903)
|++||++.....+.+.+|.+.|+.+..+++|.++.+-+.| ++++||++..... .|+..+.++.. ....|+|+|+
T Consensus 198 ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~ 277 (338)
T KOG0265|consen 198 IKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPN 277 (338)
T ss_pred eeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCC
Confidence 9999999999999999999999999999999999999999 9999999876443 45776666533 4578899999
Q ss_pred CCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 846 YPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 846 g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
++++-+|+.|+.+++||......+ .+.+|.+.|++++|+|...+|.+++.|.+|++
T Consensus 278 ~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 278 GTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred CCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 999999999999999999987766 89999999999999999999999999999986
No 6
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.1e-37 Score=325.40 Aligned_cols=244 Identities=25% Similarity=0.420 Sum_probs=230.8
Q ss_pred eeeeEeecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 614 KEANSVRASTSKVICCHFSSD--GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspd--g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
..+.+|++|++.|.++.|+|. +..||||+.||+|++|++++...+..+++|...|..++|+|+|++|+|+|.|.+-++
T Consensus 208 ~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRl 287 (459)
T KOG0272|consen 208 NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRL 287 (459)
T ss_pred ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhh
Confidence 566789999999999999997 569999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEc
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~ 768 (903)
||+++ +..+....||...|.+|+|+++|. +++||+.|..-+|||+++++++-.+.++ +..+.|+|+|-.+++|+.
T Consensus 288 WD~~t-k~ElL~QEGHs~~v~~iaf~~DGS-L~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~ 365 (459)
T KOG0272|consen 288 WDLET-KSELLLQEGHSKGVFSIAFQPDGS-LAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSS 365 (459)
T ss_pred ccccc-chhhHhhcccccccceeEecCCCc-eeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCC
Confidence 99998 667777889999999999999976 7889999999999999999999999875 567899999999999999
Q ss_pred CCeEEEEECCCCeEEEEecCCCCCeEEEEEcC-CCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC
Q 002591 769 ENVVSILDAETQACRLSLQGHTKPIDSVCWDP-SGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 769 dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~sp-dg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g 846 (903)
|++++|||++..+.++++.+|...|+.|+|+| .|.+|++++.| +++||..++. .+++.+.+|++.|.++.+++++
T Consensus 366 Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~---~~~ksLaGHe~kV~s~Dis~d~ 442 (459)
T KOG0272|consen 366 DNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW---SPLKSLAGHEGKVISLDISPDS 442 (459)
T ss_pred CCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc---ccchhhcCCccceEEEEeccCC
Confidence 99999999999999999999999999999999 78899999999 9999999877 7899999999999999999999
Q ss_pred CEEEEEECCCeEEEEE
Q 002591 847 PSLLVIGCYQSLELWN 862 (903)
Q Consensus 847 ~~l~t~s~dg~I~vwd 862 (903)
.+|++++.|++|++|.
T Consensus 443 ~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 443 QAIATSSFDRTIKLWR 458 (459)
T ss_pred ceEEEeccCceeeecc
Confidence 9999999999999995
No 7
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=1.3e-35 Score=305.32 Aligned_cols=286 Identities=23% Similarity=0.408 Sum_probs=263.3
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
.|+..+.+.+|.+-|.|+++.|...+|++|+.|++|+|||+.+++.+.++.+|...|..+++++-..||++++.|+.|+.
T Consensus 140 pwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKC 219 (460)
T KOG0285|consen 140 PWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKC 219 (460)
T ss_pred cceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEc
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~ 768 (903)
||++. .+.++.+.||-..|+|++.+|.-+ +|++|+.|.++||||+++...+.++.++ +..+.+.+.+..+++++.
T Consensus 220 wDLe~-nkvIR~YhGHlS~V~~L~lhPTld-vl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~ 297 (460)
T KOG0285|consen 220 WDLEY-NKVIRHYHGHLSGVYCLDLHPTLD-VLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSH 297 (460)
T ss_pred Eechh-hhhHHHhccccceeEEEeccccce-eEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecC
Confidence 99997 788999999999999999999855 6679999999999999999999888765 566778899999999999
Q ss_pred CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCE
Q 002591 769 ENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 769 dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~ 848 (903)
|++|++||++.++...++..|...|.+++.+|....||+++.|.|+-|++..+ ..+..+.+|...|.+++...|+ +
T Consensus 298 D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g---~f~~nlsgh~~iintl~~nsD~-v 373 (460)
T KOG0285|consen 298 DSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEG---EFLQNLSGHNAIINTLSVNSDG-V 373 (460)
T ss_pred CceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCccceeccCCcc---chhhccccccceeeeeeeccCc-e
Confidence 99999999999999999999999999999999999999999999999999776 5666688888999999988776 6
Q ss_pred EEEEECCCeEEEEECCCCcEEE----E-----ccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 849 LLVIGCYQSLELWNMSENKTMT----L-----TAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 849 l~t~s~dg~I~vwdl~~~~~~~----~-----~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+++|+.+|.|.+||.+++.... . ...+..|.+.+|+..|..|++|..|.+|++|+
T Consensus 374 ~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 374 LVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred EEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEe
Confidence 8889999999999999986551 1 12456799999999999999999999999996
No 8
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=3.1e-34 Score=308.26 Aligned_cols=360 Identities=22% Similarity=0.355 Sum_probs=282.1
Q ss_pred CcceEEEEeCCCceec---cCCCeeeeCCcchhh------------------hhhccccccCCCCCceEE-eeecCCCCC
Q 002591 540 SKPLMMFGTDGAGTLT---SPSNQLWDDKDLELR------------------ADMDRLVEDGSLDDNVES-FLSHDDTDP 597 (903)
Q Consensus 540 ~~~~i~~s~dg~~~~~---~~~~~lWd~~~~~~~------------------~~~~~~~~~gs~d~~v~~-~~~~d~~~~ 597 (903)
......|+|.|.|+++ ++.++|||...-+.+ .+-.|+.+.|+--++... |+.+.....
T Consensus 61 ~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~Sv 140 (603)
T KOG0318|consen 61 QVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSV 140 (603)
T ss_pred eeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCcc
Confidence 3456788999998887 456699998762211 112344454444444433 333222111
Q ss_pred cC------------------------CCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 002591 598 RD------------------------AGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD 653 (903)
Q Consensus 598 ~~------------------------~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~ 653 (903)
.+ .......+..|.+|+...+++.|..-|.|++|+|||.++|+++.||+|.|||-.
T Consensus 141 Gei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGk 220 (603)
T KOG0318|consen 141 GEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGK 220 (603)
T ss_pred ceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCC
Confidence 11 112344566788899999999999999999999999999999999999999999
Q ss_pred CCceeEEec---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--------------------------------
Q 002591 654 TLKSKTNLE---EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG-------------------------------- 698 (903)
Q Consensus 654 t~~~~~~l~---~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~-------------------------------- 698 (903)
+++.+..+. +|.+.|.+|+|+||+..|++++.|.+++|||+.+..
T Consensus 221 tge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G 300 (603)
T KOG0318|consen 221 TGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSG 300 (603)
T ss_pred CccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCc
Confidence 999999998 899999999999999999999999999999997521
Q ss_pred ----------ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE-----------------------
Q 002591 699 ----------YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR----------------------- 745 (903)
Q Consensus 699 ----------~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~----------------------- 745 (903)
..++.+.+|...|+++..++++.+ |++|+.||.|.-||+.++.+-+
T Consensus 301 ~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~-i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t 379 (603)
T KOG0318|consen 301 TINYLNPSDPSVLKVISGHNKSITALTVSPDGKT-IYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFT 379 (603)
T ss_pred EEEEecccCCChhheecccccceeEEEEcCCCCE-EEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEE
Confidence 113445589999999999999865 5599999999999986543210
Q ss_pred --------Ee------------------------------------------e-----------cCceeEEEecCCCEEE
Q 002591 746 --------VF------------------------------------------K-----------GGTAQMRFQPHLGRYL 764 (903)
Q Consensus 746 --------~~------------------------------------------~-----------~~~~~v~~sp~~~~ll 764 (903)
.+ . -...+++++|++..++
T Consensus 380 ~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~va 459 (603)
T KOG0318|consen 380 IGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVA 459 (603)
T ss_pred EecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEE
Confidence 00 0 0123466888999999
Q ss_pred EEEcCCeEEEEECCCCeE--EEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEE
Q 002591 765 AAAAENVVSILDAETQAC--RLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCV 841 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~~~--~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~ 841 (903)
+|+.|+.|+||.+..... ...+..|..+|++|+|+||+.|||++... .+.+||+.+.+. ....+.-|...|.+++
T Consensus 460 VGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~--~~~~w~FHtakI~~~a 537 (603)
T KOG0318|consen 460 VGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV--KTNRWAFHTAKINCVA 537 (603)
T ss_pred EecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce--ecceeeeeeeeEEEEE
Confidence 999999999999987643 33456799999999999999999999988 999999988754 4445556889999999
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCcE-E-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 842 FHPTYPSLLVIGCYQSLELWNMSENKT-M-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 842 ~sp~g~~l~t~s~dg~I~vwdl~~~~~-~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|+|+..++++|+-|-.|.||+++.... + ...+|...|+.+.|- +...|++.+.|..|++|.
T Consensus 538 WsP~n~~vATGSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wl-de~tvvSsG~Da~iK~W~ 600 (603)
T KOG0318|consen 538 WSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWL-DESTVVSSGQDANIKVWN 600 (603)
T ss_pred eCCCceEEEeccccceEEEEEccChhhheEeccccccCceeEEEe-cCceEEeccCcceeEEec
Confidence 999999999999999999999976433 3 556899999999995 556789999999999995
No 9
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=289.68 Aligned_cols=285 Identities=22% Similarity=0.386 Sum_probs=245.0
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECC-----CCceeEEeccCCCCeEEEEECCCCCEEEEEeC
Q 002591 612 SFKEANSVRASTSKVICCHFSSDG-KLLATGGHDKKAVLWHTD-----TLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 685 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg-~~Latgs~Dg~V~vWd~~-----t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~ 685 (903)
.+....++++|++.|+.++..+.+ ..|++++.|++|.+|++. .|..++.+++|+..|..+..++||.+.++++.
T Consensus 4 ~l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 4 QLVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred hheeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence 345667899999999999998874 589999999999999875 46778999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----CceeEEEecC--
Q 002591 686 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----GTAQMRFQPH-- 759 (903)
Q Consensus 686 Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----~~~~v~~sp~-- 759 (903)
|+++++||+.+ ++..+.|.+|...|.+++|+++... |++|+.|.+|++|++...-....... -+.+++|+|+
T Consensus 84 D~~lrlWDl~~-g~~t~~f~GH~~dVlsva~s~dn~q-ivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~ 161 (315)
T KOG0279|consen 84 DGTLRLWDLAT-GESTRRFVGHTKDVLSVAFSTDNRQ-IVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNES 161 (315)
T ss_pred cceEEEEEecC-CcEEEEEEecCCceEEEEecCCCce-eecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCC
Confidence 99999999998 6899999999999999999999764 55999999999999986543333332 3789999999
Q ss_pred CCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 760 LGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 760 ~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
...|+.++.|++|++||+++.+....+.+|.+.++.++++|||.++++|+.| .+.+||++.+ +++..+. +...|.
T Consensus 162 ~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~---k~lysl~-a~~~v~ 237 (315)
T KOG0279|consen 162 NPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG---KNLYSLE-AFDIVN 237 (315)
T ss_pred CcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCC---ceeEecc-CCCeEe
Confidence 5788899999999999999999999999999999999999999999999999 9999999887 4455543 477899
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EE----ccC-----CCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 839 SCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TL----TAH-----EGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 839 si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~----~~h-----~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+++|+|+...|+ ...+..|+|||+.++.++ .+ .+. .-...+++|++||..|++|-.|+.|++|.
T Consensus 238 sl~fspnrywL~-~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 238 SLCFSPNRYWLC-AATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred eEEecCCceeEe-eccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEE
Confidence 999999875544 455556999999998876 21 122 33456789999999999999999999994
No 10
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.8e-35 Score=305.78 Aligned_cols=288 Identities=26% Similarity=0.500 Sum_probs=269.2
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
.+.+...+.+|...|+.+-|+|+-..+++++.|++|++||..+++.+..+++|.+.|.+|+|+..|++||+++.|-.+.+
T Consensus 97 Rp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~L 176 (406)
T KOG0295|consen 97 RPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKL 176 (406)
T ss_pred CCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhh
Confidence 45677888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEc
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~ 768 (903)
||..+...+++.+.+|...|.+++|-|.++++ ++|+.|.+|+.|++.++-|+.+|.++ +..++..-+|..+++++.
T Consensus 177 Wd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~i-lS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~ 255 (406)
T KOG0295|consen 177 WDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHI-LSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSN 255 (406)
T ss_pred eeHHHHHHHHHHhcCcccceeeEEEEecCCee-eecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCC
Confidence 99987667889999999999999999998755 59999999999999999999999886 455677788888888899
Q ss_pred CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC---------------CCEEEEEeCC-eEEEEECCCCCCcceEEEeec
Q 002591 769 ENVVSILDAETQACRLSLQGHTKPIDSVCWDPS---------------GELLASVSED-SVRVWTVGSGSEGECVHELSC 832 (903)
Q Consensus 769 dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd---------------g~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~ 832 (903)
|.+|++|-+.++.+...+..|+-+|.|++|.|. +.++++++.| +|++||+.++ .|+.++.+
T Consensus 256 dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg---~cL~tL~g 332 (406)
T KOG0295|consen 256 DQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG---MCLFTLVG 332 (406)
T ss_pred CceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC---eEEEEEec
Confidence 999999999999999999999999999999873 2489999999 9999999988 99999999
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 833 NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 833 ~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|++.|..++|+|.|+||+++..|+++++||+++++++ .+.+|+..|++++|+.+..+++||+-|..+++|.
T Consensus 333 hdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 333 HDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred ccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 9999999999999999999999999999999999998 7889999999999999999999999999999994
No 11
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=284.70 Aligned_cols=266 Identities=21% Similarity=0.436 Sum_probs=239.3
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCc-eeEEeccCCCceEEE
Q 002591 636 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGY-SLRTFMGHSASVMSL 714 (903)
Q Consensus 636 ~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~-~~~~~~~h~~~V~sl 714 (903)
-+||++++|.+|++|...+|.+.+++......|+.+...|+++.||+++. -.||+||+++... ++.+|.+|+..|+++
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaV 89 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAV 89 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEE
Confidence 38999999999999999999999999999999999999999999999985 4599999997554 789999999999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecC-CCC
Q 002591 715 DFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQG-HTK 791 (903)
Q Consensus 715 ~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~-h~~ 791 (903)
.|..+|+ .+++|++||+++|||++...|-+.|. ..++++..+|+-..|+++..+|.|++||+.+..+...+.. ...
T Consensus 90 gF~~dgr-WMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~ 168 (311)
T KOG0315|consen 90 GFQCDGR-WMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDT 168 (311)
T ss_pred EEeecCe-EEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCc
Confidence 9999976 56699999999999999988777664 5789999999999999999999999999999877766543 456
Q ss_pred CeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC---CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-
Q 002591 792 PIDSVCWDPSGELLASVSED-SVRVWTVGSGS---EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSEN- 866 (903)
Q Consensus 792 ~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~---~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~- 866 (903)
.|.++...|||.+++.+... ..++|++-+.. ....+..+..|...+..|.++|++++|++++.|.+++||+.++.
T Consensus 169 ~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~ 248 (311)
T KOG0315|consen 169 SIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFF 248 (311)
T ss_pred ceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCce
Confidence 89999999999999988877 99999997653 35667788899999999999999999999999999999999987
Q ss_pred cEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 867 KTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 867 ~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+.. .+.+|...|++++|+.||.||+||+.|+.+++|+
T Consensus 249 kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 249 KLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred eeEEEeecCCceEEeeeeccCccEEEecCCCCceeecc
Confidence 222 7789999999999999999999999999999996
No 12
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=6.5e-34 Score=329.02 Aligned_cols=287 Identities=30% Similarity=0.550 Sum_probs=255.9
Q ss_pred eeeeeEeecC-CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--eeEEeccCCCCeEEEEECCCCCEEEEEeCCCcE
Q 002591 613 FKEANSVRAS-TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK--SKTNLEEHSSLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 613 ~~~~~~l~~H-~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~--~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
+..+..+..| ...|+|+.|+++|++|++++.|+.|++|+..+.+ ....+.+|...|.+++|+|+++++++++.|++|
T Consensus 148 ~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~ti 227 (456)
T KOG0266|consen 148 FSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTL 227 (456)
T ss_pred ceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceE
Confidence 3345555554 8899999999999999999999999999998777 778889999999999999999999999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~ 766 (903)
+|||+...+.+++++.+|...|++++|+|++ .++++|+.|++|+|||++++++++.+.+ .+..++|.+++..++++
T Consensus 228 riwd~~~~~~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~ 306 (456)
T KOG0266|consen 228 RIWDLKDDGRNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA 306 (456)
T ss_pred EEeeccCCCeEEEEecCCCCceEEEEecCCC-CEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc
Confidence 9999966678999999999999999999998 6888999999999999999999998876 46778899999999999
Q ss_pred EcCCeEEEEECCCCe--EEEEecCCCCC--eEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCc---eE
Q 002591 767 AAENVVSILDAETQA--CRLSLQGHTKP--IDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNK---FH 838 (903)
Q Consensus 767 s~dg~I~i~D~~t~~--~~~~l~~h~~~--V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~---i~ 838 (903)
+.|+.|+|||+.++. ++..+..+... +++++|+|++.+|++++.| .+++||+..+ .++..+.+|... +.
T Consensus 307 s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~---~~~~~~~~~~~~~~~~~ 383 (456)
T KOG0266|consen 307 SYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG---KSVGTYTGHSNLVRCIF 383 (456)
T ss_pred CCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC---cceeeecccCCcceeEe
Confidence 999999999999999 66777776665 9999999999999999999 9999999877 555566655553 44
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccC-CCCEEEEEEecCCCEEEEEe--cCCcEEEcC
Q 002591 839 SCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAH-EGLIAALAVSTETGYVASAS--HDKFVKLWK 903 (903)
Q Consensus 839 si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h-~~~V~sl~~spdg~~LaSgs--~DG~I~IWd 903 (903)
+..+++.+.++++++.|+.|++||+.++..+ .+.+| ...|..+.|++...++++++ .|+.|++|+
T Consensus 384 ~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 384 SPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWK 452 (456)
T ss_pred cccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEec
Confidence 4556789999999999999999999987766 78899 89999999999999999998 799999996
No 13
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=7.4e-36 Score=312.23 Aligned_cols=275 Identities=22% Similarity=0.446 Sum_probs=246.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
...|..|.|.|+|+.|++|+..|.+.||+..+......+..|..+|+++.|++++.++++|+.+|.|++|+..- ..+.
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm--nnVk 173 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM--NNVK 173 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch--hhhH
Confidence 45799999999999999999999999999877777777889999999999999999999999999999999874 3344
Q ss_pred EeccC-CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEEcCCeEEEEECC
Q 002591 703 TFMGH-SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAAAENVVSILDAE 778 (903)
Q Consensus 703 ~~~~h-~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s~dg~I~i~D~~ 778 (903)
.+..| ...|++++|+|++. .|++|++||+|+|||....+..+++.+ .+.++.|+|..+.+++++.|+.|++||.+
T Consensus 174 ~~~ahh~eaIRdlafSpnDs-kF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDpr 252 (464)
T KOG0284|consen 174 IIQAHHAEAIRDLAFSPNDS-KFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPR 252 (464)
T ss_pred HhhHhhhhhhheeccCCCCc-eeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCC
Confidence 55554 49999999999755 566999999999999999887777766 47889999999999999999999999999
Q ss_pred CCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC-CEEEEEECCC
Q 002591 779 TQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY-PSLLVIGCYQ 856 (903)
Q Consensus 779 t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g-~~l~t~s~dg 856 (903)
++.|+.++.+|+..|..+.|.+++++|++++.| .+++||+++. +.+..+.+|...++++.|+|-. ..|.+|+.||
T Consensus 253 Sg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~m---kEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg 329 (464)
T KOG0284|consen 253 SGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTM---KELFTYRGHKKDVTSLTWHPLNESLFTSGGSDG 329 (464)
T ss_pred CcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHh---HHHHHhhcchhhheeeccccccccceeeccCCC
Confidence 999999999999999999999999999999999 9999999965 6677788899999999999954 5677889999
Q ss_pred eEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 857 SLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 857 ~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.|..|.+...+.+ .-.+|+..|++++|+|-|.+|++|+.|.++++|.
T Consensus 330 svvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 330 SVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred ceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeec
Confidence 9999999855555 4458999999999999999999999999999993
No 14
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.1e-32 Score=294.58 Aligned_cols=282 Identities=30% Similarity=0.566 Sum_probs=251.6
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
.++++|.+.|++++|++++++|++++.||.|++||+.+++....+..|...|.++.|++++++|++++.||.|++||+.+
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~ 82 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLET 82 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCc
Confidence 46778999999999999999999999999999999998888889999999999999999999999999999999999987
Q ss_pred CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEEcCCeEE
Q 002591 697 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAAAENVVS 773 (903)
Q Consensus 697 ~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s~dg~I~ 773 (903)
...+..+..|...|.++.|++++ .++++++.||.|++||+++++....+.. .+..+.|++++..+++++.++.|+
T Consensus 83 -~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 160 (289)
T cd00200 83 -GECVRTLTGHTSYVSSVAFSPDG-RILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIK 160 (289)
T ss_pred -ccceEEEeccCCcEEEEEEcCCC-CEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEE
Confidence 56777888899999999999984 4676777899999999998887777653 467889999977777777799999
Q ss_pred EEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEE
Q 002591 774 ILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVI 852 (903)
Q Consensus 774 i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~ 852 (903)
+||+++++.+..+..|...|.+++|+++++.+++++.+ .|++||++.+ ..+..+..+...+.++.|++++.+++++
T Consensus 161 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 237 (289)
T cd00200 161 LWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTG---KCLGTLRGHENGVNSVAFSPDGYLLASG 237 (289)
T ss_pred EEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCC---ceecchhhcCCceEEEEEcCCCcEEEEE
Confidence 99999999999999999999999999999888888877 9999999875 5556665677899999999998888877
Q ss_pred ECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 853 GCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 853 s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+.++.|++||+.+++.. .+..|...|.+++|++++.+|++++.||.|++||
T Consensus 238 ~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 238 SEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 77999999999987766 6678999999999999999999999999999997
No 15
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=2.5e-34 Score=307.00 Aligned_cols=290 Identities=19% Similarity=0.361 Sum_probs=254.2
Q ss_pred ceeeeeEeecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCC-CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcE
Q 002591 612 SFKEANSVRASTSKVICCHFSS-DGKLLATGGHDKKAVLWHTDT-LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fsp-dg~~Latgs~Dg~V~vWd~~t-~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
+-+.+.++.+|+..|+++.|.| .+.+|++++.|+.|+||++.. +++++++.+|..+|.+++|+.+|..|++++.|+.|
T Consensus 203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~l 282 (503)
T KOG0282|consen 203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFL 282 (503)
T ss_pred cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceee
Confidence 5567889999999999999999 889999999999999999874 89999999999999999999999999999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee---cCceeEEEecCCCEEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK---GGTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~---~~~~~v~~sp~~~~ll~~ 766 (903)
++||+++ +.++..+. ....++|+.|+|++.+++++|+.|+.|+.||+++++.+..+. +.+..+.|.+.+.+++++
T Consensus 283 KlwDtET-G~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFiss 360 (503)
T KOG0282|consen 283 KLWDTET-GQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISS 360 (503)
T ss_pred eeecccc-ceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeee
Confidence 9999999 77777776 456789999999998888899999999999999999887775 457789999999999999
Q ss_pred EcCCeEEEEECCCCeEEEEecC-CCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecC--CCceEEEEE
Q 002591 767 AAENVVSILDAETQACRLSLQG-HTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCN--GNKFHSCVF 842 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~-h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~--~~~i~si~~ 842 (903)
+.|+.++||+.+....+..+.. +.-...+|..+|+++++++-+.| .|.||.+...-.....+.+.+| .+.-..|.|
T Consensus 361 SDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~f 440 (503)
T KOG0282|consen 361 SDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDF 440 (503)
T ss_pred ccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEE
Confidence 9999999999999876654432 33346688999999999999999 9999997655444444445555 345667899
Q ss_pred eCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCC-CEEEEEecCCcEEEcC
Q 002591 843 HPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTET-GYVASASHDKFVKLWK 903 (903)
Q Consensus 843 sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg-~~LaSgs~DG~I~IWd 903 (903)
+|||.+|++|..||.+.+||.++.+++ .+.+|+..+..+.|+|.. ..||||+.||.|++|+
T Consensus 441 SpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 441 SPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred cCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999999999999999988 889999999999999954 4799999999999997
No 16
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.1e-32 Score=304.40 Aligned_cols=292 Identities=23% Similarity=0.377 Sum_probs=256.3
Q ss_pred cccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCC-CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC
Q 002591 607 VSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHD-KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 685 (903)
Q Consensus 607 ~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~D-g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~ 685 (903)
+..-..+..++.+.-...+|..++|+..|.+||.|+.. |.+.||++.+...+....+|...|+|++++|||.++|+|+.
T Consensus 291 LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~e 370 (893)
T KOG0291|consen 291 LYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAE 370 (893)
T ss_pred EEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccC
Confidence 44444677888888888999999999999999998765 88999999998889999999999999999999999999999
Q ss_pred CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC----ceeEEEecCCC
Q 002591 686 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG----TAQMRFQPHLG 761 (903)
Q Consensus 686 Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~----~~~v~~sp~~~ 761 (903)
||+|+|||..+ +.|+.+|..|+..|+.+.|+..+..+ ++.+-||+|+.||+...++.++|..+ ..+++..|.|.
T Consensus 371 DgKVKvWn~~S-gfC~vTFteHts~Vt~v~f~~~g~~l-lssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGe 448 (893)
T KOG0291|consen 371 DGKVKVWNTQS-GFCFVTFTEHTSGVTAVQFTARGNVL-LSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGE 448 (893)
T ss_pred CCcEEEEeccC-ceEEEEeccCCCceEEEEEEecCCEE-EEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCC
Confidence 99999999998 89999999999999999999987754 58999999999999999999998754 46788888888
Q ss_pred EEEEEEcCC-eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEE
Q 002591 762 RYLAAAAEN-VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHS 839 (903)
Q Consensus 762 ~ll~~s~dg-~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~s 839 (903)
.+++|+.|. .|.+|++.+|+.+..+.+|+++|.+++|+|++..|++++.| +|++||+-... ..+.++. ....+..
T Consensus 449 lV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~--~~vEtl~-i~sdvl~ 525 (893)
T KOG0291|consen 449 LVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSS--GTVETLE-IRSDVLA 525 (893)
T ss_pred EEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccC--ceeeeEe-eccceeE
Confidence 888888886 79999999999999999999999999999999999999999 99999996542 1222322 3667899
Q ss_pred EEEeCCCCEEEEEECCCeEEEEECCCCcEE-EE--------------------ccCCCCEEEEEEecCCCEEEEEecCCc
Q 002591 840 CVFHPTYPSLLVIGCYQSLELWNMSENKTM-TL--------------------TAHEGLIAALAVSTETGYVASASHDKF 898 (903)
Q Consensus 840 i~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~--------------------~~h~~~V~sl~~spdg~~LaSgs~DG~ 898 (903)
++|+|+|+.|++++-||.|.+||+..+..+ .+ .+....++.+++++||.+|++|+....
T Consensus 526 vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~ 605 (893)
T KOG0291|consen 526 VSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNS 605 (893)
T ss_pred EEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCccc
Confidence 999999999999999999999999876543 11 113467899999999999999999999
Q ss_pred EEEcC
Q 002591 899 VKLWK 903 (903)
Q Consensus 899 I~IWd 903 (903)
|+||+
T Consensus 606 iCiY~ 610 (893)
T KOG0291|consen 606 ICIYD 610 (893)
T ss_pred EEEEE
Confidence 99985
No 17
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=6.7e-33 Score=294.77 Aligned_cols=280 Identities=24% Similarity=0.481 Sum_probs=245.1
Q ss_pred eeEeecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCC--Ccee--EEec----------cCCCCeEEEEECCCCCEE
Q 002591 616 ANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDT--LKSK--TNLE----------EHSSLITDVRFSPSMPRL 680 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t--~~~~--~~l~----------~h~~~V~~l~fspdg~~L 680 (903)
++.++ |+..|.+++|+|-.. .|++|+.|-+.++|++.. .... ..|+ ..+..|++++|+.+|..|
T Consensus 172 ~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~L 250 (524)
T KOG0273|consen 172 AKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLL 250 (524)
T ss_pred eeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeE
Confidence 34455 999999999999766 999999999999999863 1111 1111 134679999999999999
Q ss_pred EEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCc---eeEEEe
Q 002591 681 ATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGT---AQMRFQ 757 (903)
Q Consensus 681 asgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~---~~v~~s 757 (903)
|+|+.||.++||+.. +..+.++..|.++|.+|.|+.+|.+++ +++.|+++.+||..++.+...|..+. ..+.|.
T Consensus 251 atG~~~G~~riw~~~--G~l~~tl~~HkgPI~slKWnk~G~yil-S~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~ 327 (524)
T KOG0273|consen 251 ATGSEDGEARIWNKD--GNLISTLGQHKGPIFSLKWNKKGTYIL-SGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ 327 (524)
T ss_pred EEeecCcEEEEEecC--chhhhhhhccCCceEEEEEcCCCCEEE-eccCCccEEEEeccCceEEEeeeeccCCccceEEe
Confidence 999999999999987 577899999999999999999988665 99999999999999998887765433 446665
Q ss_pred cCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCc
Q 002591 758 PHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 758 p~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
.+ ..|++++.|+.|+++-+....++.++.+|.++|.++.|+|.|.+|+++++| +++||..... .+++.+..|...
T Consensus 328 ~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~---~~~~~l~~Hske 403 (524)
T KOG0273|consen 328 SN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS---NSVHDLQAHSKE 403 (524)
T ss_pred cC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC---cchhhhhhhccc
Confidence 44 678899999999999999999999999999999999999999999999999 9999998765 778888889999
Q ss_pred eEEEEEeCCCC---------EEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 837 FHSCVFHPTYP---------SLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 837 i~si~~sp~g~---------~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|..+.|+|.+. .+++++.|++|++||+..+.++ .+..|..+|++++|+|+|+|+|+|+.||.|+||+
T Consensus 404 i~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 404 IYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred eeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecc
Confidence 99999999653 5899999999999999999998 7889999999999999999999999999999995
No 18
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=3.5e-32 Score=271.78 Aligned_cols=281 Identities=22% Similarity=0.422 Sum_probs=239.6
Q ss_pred eeeeeEeecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC---CceeEEe-ccCCCCeEEEEECCCCCEEEEEeCCC
Q 002591 613 FKEANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDT---LKSKTNL-EEHSSLITDVRFSPSMPRLATSSFDK 687 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspd-g~~Latgs~Dg~V~vWd~~t---~~~~~~l-~~h~~~V~~l~fspdg~~Lasgs~Dg 687 (903)
+..+..+.+|.++|..++|+|- |..||+|+.|+.|+||++.. ..++..+ .+|...|..|+|+|.|++|++++.|.
T Consensus 4 l~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 4 LILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred ceeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 4567889999999999999998 89999999999999999874 4445444 37999999999999999999999999
Q ss_pred cEEEEeCCC-CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC---eeeEEeecC---ceeEEEecCC
Q 002591 688 TVRVWDADN-PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG---SCTRVFKGG---TAQMRFQPHL 760 (903)
Q Consensus 688 ~I~IWDl~~-~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~---~~~~~~~~~---~~~v~~sp~~ 760 (903)
++.||.-.. .-+++.++.||...|.|++|+++|. +||+|+.|..|.||.+..+ +|..++..+ +..+.|+|..
T Consensus 84 t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~-~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~ 162 (312)
T KOG0645|consen 84 TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGN-YLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTE 162 (312)
T ss_pred eEEEeecCCCceeEEeeeeccccceeEEEEcCCCC-EEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCc
Confidence 999997653 2367889999999999999999976 6779999999999999754 466777664 5678899999
Q ss_pred CEEEEEEcCCeEEEEECC---CCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCc
Q 002591 761 GRYLAAAAENVVSILDAE---TQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 761 ~~ll~~s~dg~I~i~D~~---t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
..|++++.|++|++|+-. ...++.++.+|...|.+++|++.|..|+++++| +|+||...+. .-..|...
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-------~~~~~sr~ 235 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-------LSGMHSRA 235 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC-------cchhcccc
Confidence 999999999999999766 347899999999999999999999999999999 9999996532 11234677
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEECCCCc------EE--EEccCCCCEEEEEEecC-CCEEEEEecCCcEEEcC
Q 002591 837 FHSCVFHPTYPSLLVIGCYQSLELWNMSENK------TM--TLTAHEGLIAALAVSTE-TGYVASASHDKFVKLWK 903 (903)
Q Consensus 837 i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~------~~--~~~~h~~~V~sl~~spd-g~~LaSgs~DG~I~IWd 903 (903)
++.+.|. ...|++++.|+.|+||.-...- ++ ....|+..|+++.|.|. ..+|++|++||.|++|.
T Consensus 236 ~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 236 LYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred eEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEE
Confidence 8889998 4579999999999999776431 11 34579999999999994 67899999999999994
No 19
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.3e-32 Score=269.72 Aligned_cols=267 Identities=22% Similarity=0.338 Sum_probs=235.9
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--eeEEeccCCCCeEEEEECCCCCEEEEEeCCCcE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK--SKTNLEEHSSLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~--~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
+.++.+++.-..+.|+.+.+.||++.||+++.- .|++||+.+++ ++.+|.+|+..|++|.|..+|+.+++|++||++
T Consensus 29 tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~ 107 (311)
T KOG0315|consen 29 TGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTV 107 (311)
T ss_pred cCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceE
Confidence 557888998888999999999999999999854 79999998654 689999999999999999999999999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee----cCceeEEEecCCCEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK----GGTAQMRFQPHLGRYLA 765 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~----~~~~~v~~sp~~~~ll~ 765 (903)
+|||++. -.+-+.|. |..+|+++..+|+-..|| +|+.+|.|++||+.+..|.+.+- ..+..+.+.+++..+++
T Consensus 108 kIWdlR~-~~~qR~~~-~~spVn~vvlhpnQteLi-s~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a 184 (311)
T KOG0315|consen 108 KIWDLRS-LSCQRNYQ-HNSPVNTVVLHPNQTELI-SGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAA 184 (311)
T ss_pred EEEeccC-cccchhcc-CCCCcceEEecCCcceEE-eecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEE
Confidence 9999998 44445554 779999999999977776 99999999999999887766542 35678899999999999
Q ss_pred EEcCCeEEEEECCCC------eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 766 AAAENVVSILDAETQ------ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 766 ~s~dg~I~i~D~~t~------~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
+...|.+++|++-+. +++.++..|.+.+..+.++||+++|++++.| +++||++.+. .+.-..+.+|...+.
T Consensus 185 ~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~--~kle~~l~gh~rWvW 262 (311)
T KOG0315|consen 185 ANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF--FKLELVLTGHQRWVW 262 (311)
T ss_pred ecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc--eeeEEEeecCCceEE
Confidence 999999999998754 5667788999999999999999999999999 9999999875 466677888899999
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEe
Q 002591 839 SCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVS 884 (903)
Q Consensus 839 si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~s 884 (903)
.|+|+.++.||++++.|+.+++||+..++.+ ...+|.....|++..
T Consensus 263 dc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 263 DCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred eeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 9999999999999999999999999999987 677888887777753
No 20
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-32 Score=274.01 Aligned_cols=249 Identities=18% Similarity=0.294 Sum_probs=216.2
Q ss_pred eeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 002591 613 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 692 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IW 692 (903)
-..++.|++|+..|..+..++||.+.++++.|+++++||+.+++....|.+|...|.+++|++|.+.|++|+.|++|++|
T Consensus 53 G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklw 132 (315)
T KOG0279|consen 53 GVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLW 132 (315)
T ss_pred CceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeee
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCceeEEeccC--CCceEEEEecCCC-CeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEE
Q 002591 693 DADNPGYSLRTFMGH--SASVMSLDFHPNK-DDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAA 766 (903)
Q Consensus 693 Dl~~~~~~~~~~~~h--~~~V~sl~fsp~~-~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~ 766 (903)
++.. .+..++..+ .+.|.|++|+|+. +-+|++++.|++|++||+++.+....|.++ ++.+.++|+|..++.|
T Consensus 133 nt~g--~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasG 210 (315)
T KOG0279|consen 133 NTLG--VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASG 210 (315)
T ss_pred eecc--cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecC
Confidence 9985 444444443 7899999999985 557789999999999999999988887654 6778999999999999
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEE------eecCCCceEEE
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHE------LSCNGNKFHSC 840 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~------~~~~~~~i~si 840 (903)
+.||.+.+||++.++.++.+. |...|.+++|+|+...|+.+....|+|||+.+......+.. .........++
T Consensus 211 gkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clsl 289 (315)
T KOG0279|consen 211 GKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSL 289 (315)
T ss_pred CCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeeccCCceEEEeccchhhhhhccccccccccccCCcEEEEE
Confidence 999999999999999988776 88999999999988888877777999999988733222211 11123346788
Q ss_pred EEeCCCCEEEEEECCCeEEEEECC
Q 002591 841 VFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 841 ~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
+|+++|..|+++-.|+.|++|.+.
T Consensus 290 aws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 290 AWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEcCCCcEEEeeecCCcEEEEEee
Confidence 999999999999999999999875
No 21
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.1e-33 Score=290.75 Aligned_cols=286 Identities=19% Similarity=0.318 Sum_probs=241.2
Q ss_pred cceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---CceeEEeccCCCCeEEEEECCCCCEEEEEeCCC
Q 002591 611 FSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT---LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDK 687 (903)
Q Consensus 611 ~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t---~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg 687 (903)
++..+...+..|++.|+-+.||++|++||+++.|.+..||++.. .+.++++.+|..+|..|.|+||.++|++|+.|.
T Consensus 212 ip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e 291 (519)
T KOG0293|consen 212 IPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE 291 (519)
T ss_pred CCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH
Confidence 36778888999999999999999999999999999999998763 456888999999999999999999999999999
Q ss_pred cEEEEeCCCCCceeEEec-cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee----cCceeEEEecCCCE
Q 002591 688 TVRVWDADNPGYSLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK----GGTAQMRFQPHLGR 762 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~----~~~~~v~~sp~~~~ 762 (903)
.+++||+.+ +.+...+. +|...+.+++|.||+..++ +|+.|+.|..||+.... ...++ ..+.++++.++|.+
T Consensus 292 ~~~lwDv~t-gd~~~~y~~~~~~S~~sc~W~pDg~~~V-~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~ 368 (519)
T KOG0293|consen 292 VLSLWDVDT-GDLRHLYPSGLGFSVSSCAWCPDGFRFV-TGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKY 368 (519)
T ss_pred heeeccCCc-chhhhhcccCcCCCcceeEEccCCceeE-ecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcE
Confidence 999999998 55555444 4568899999999998765 99999999999997543 33333 24678999999999
Q ss_pred EEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCc--eEE
Q 002591 763 YLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNK--FHS 839 (903)
Q Consensus 763 ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~--i~s 839 (903)
+++.+.|..|++|+.++...+..+. ...+|++++++.+++++.+.-.+ .|.+||+... ..+..+.+|... +..
T Consensus 369 vl~v~~d~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~---~lv~kY~Ghkq~~fiIr 444 (519)
T KOG0293|consen 369 VLLVTVDKKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN---KLVRKYFGHKQGHFIIR 444 (519)
T ss_pred EEEEecccceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEEEcccCeeEEeecchh---hHHHHhhcccccceEEE
Confidence 9999999999999998876664433 56789999999999998888888 9999999743 555566665432 333
Q ss_pred EEEeC-CCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCC-CEEEEEecCCcEEEcC
Q 002591 840 CVFHP-TYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTET-GYVASASHDKFVKLWK 903 (903)
Q Consensus 840 i~~sp-~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg-~~LaSgs~DG~I~IWd 903 (903)
-+|-- +..++++|+.|+.|+||+..+++++ .+.+|...|+|++|+|.. .+||+||+||+||||.
T Consensus 445 SCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 445 SCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred eccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEec
Confidence 34543 5578999999999999999999998 899999999999999955 5799999999999994
No 22
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=5.3e-32 Score=301.53 Aligned_cols=290 Identities=21% Similarity=0.306 Sum_probs=263.1
Q ss_pred CcceeeeeEeecCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCc
Q 002591 610 GFSFKEANSVRASTSKVICCHFS-SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKT 688 (903)
Q Consensus 610 ~~~~~~~~~l~~H~~~V~~l~fs-pdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~ 688 (903)
.-+++..+.+-|..+.|.+++|- |+..+||+++..+.+++|++.+..+. .+.+|++.|.+++...+|.+|++|+.|++
T Consensus 310 ~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~s 388 (775)
T KOG0319|consen 310 EDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKS 388 (775)
T ss_pred ccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCce
Confidence 34677888888999999999985 57789999999999999998877666 88999999999997677889999999999
Q ss_pred EEEEeCCCC---CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee------------EEeecCcee
Q 002591 689 VRVWDADNP---GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT------------RVFKGGTAQ 753 (903)
Q Consensus 689 I~IWDl~~~---~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~------------~~~~~~~~~ 753 (903)
|++|.++++ ..++....+|+..|.+++++..+..+|++++.|++|++|++...+.. +.+...+++
T Consensus 389 vilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~ 468 (775)
T KOG0319|consen 389 VILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINC 468 (775)
T ss_pred EEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccc
Confidence 999988542 23456778999999999999988999999999999999999873211 112346889
Q ss_pred EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeec
Q 002591 754 MRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSC 832 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~ 832 (903)
++++|++..+++|+.|.+.+||+++......++.+|+..|.|+.|++...++++++.| +|+||.+.+. .|+.++.+
T Consensus 469 Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f---SClkT~eG 545 (775)
T KOG0319|consen 469 VAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF---SCLKTFEG 545 (775)
T ss_pred eEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccc---eeeeeecC
Confidence 9999999999999999999999999999999999999999999999999999999999 9999999887 89999999
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 833 NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 833 ~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|...|..+.|-.++..|++++.||-|++|+++++++. ++.+|.+.|++++.++...+++||+.||.|.+|+
T Consensus 546 H~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 546 HTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred ccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEee
Confidence 9999999999999999999999999999999999998 8999999999999999999999999999999995
No 23
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1.1e-31 Score=285.64 Aligned_cols=274 Identities=23% Similarity=0.379 Sum_probs=251.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
+..|++++|+.+|.+||+|+.||.++||+. ++..+.++..|.++|.+|.|+.+|.||++++.|+++.|||..+ +....
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~-g~~~q 312 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHT-GTVKQ 312 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccC-ceEEE
Confidence 467999999999999999999999999995 5788999999999999999999999999999999999999987 77778
Q ss_pred EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEEcCCeEEEEECCC
Q 002591 703 TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAAAENVVSILDAET 779 (903)
Q Consensus 703 ~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t 779 (903)
.+.-|..+-.++.|-.+. -|++++.|+.|+++.+.....+.++.+ .+..+.|.|.+..|++++.|++++||....
T Consensus 313 ~f~~~s~~~lDVdW~~~~--~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~ 390 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSND--EFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ 390 (524)
T ss_pred eeeeccCCccceEEecCc--eEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCC
Confidence 888888887889997653 467999999999999998888887765 577899999999999999999999999999
Q ss_pred CeEEEEecCCCCCeEEEEEcCCC---------CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEE
Q 002591 780 QACRLSLQGHTKPIDSVCWDPSG---------ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSL 849 (903)
Q Consensus 780 ~~~~~~l~~h~~~V~sl~~spdg---------~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l 849 (903)
..+...+.+|...|..+.|+|+| ..+++++.| +|++||+..+ .+++.+..|..+|++++|+|+|+++
T Consensus 391 ~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g---v~i~~f~kH~~pVysvafS~~g~yl 467 (524)
T KOG0273|consen 391 SNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG---VPIHTLMKHQEPVYSVAFSPNGRYL 467 (524)
T ss_pred CcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC---ceeEeeccCCCceEEEEecCCCcEE
Confidence 99999999999999999999964 468888888 9999999887 8999999999999999999999999
Q ss_pred EEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 850 LVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 850 ~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
++|+.||.|.+|+..+++++......+.|..++|+.+|.+|+.+-.|+.+++-|
T Consensus 468 AsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvld 521 (524)
T KOG0273|consen 468 ASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLD 521 (524)
T ss_pred EecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEE
Confidence 999999999999999999998888888899999999999999999999988753
No 24
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=5.7e-32 Score=304.87 Aligned_cols=272 Identities=24% Similarity=0.423 Sum_probs=238.0
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-------------------------------ceeEEeccCC
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL-------------------------------KSKTNLEEHS 665 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~-------------------------------~~~~~l~~h~ 665 (903)
.++..-...|+|+.|++|+++||.|..|..|++|.+... ...+++.+|.
T Consensus 372 YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~ 451 (707)
T KOG0263|consen 372 YTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHS 451 (707)
T ss_pred EEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCC
Confidence 344445567999999999999999999999999987621 1224467899
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE
Q 002591 666 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 745 (903)
Q Consensus 666 ~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~ 745 (903)
++|..+.|+|+.++|++++.|++||+|.+.+ ..++..+.||..+|+++.|+|.| ++|||++.|++-++|.......++
T Consensus 452 GPVyg~sFsPd~rfLlScSED~svRLWsl~t-~s~~V~y~GH~~PVwdV~F~P~G-yYFatas~D~tArLWs~d~~~PlR 529 (707)
T KOG0263|consen 452 GPVYGCSFSPDRRFLLSCSEDSSVRLWSLDT-WSCLVIYKGHLAPVWDVQFAPRG-YYFATASHDQTARLWSTDHNKPLR 529 (707)
T ss_pred CceeeeeecccccceeeccCCcceeeeeccc-ceeEEEecCCCcceeeEEecCCc-eEEEecCCCceeeeeecccCCchh
Confidence 9999999999999999999999999999998 77889999999999999999985 577899999999999999988888
Q ss_pred Eeec---CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 002591 746 VFKG---GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 746 ~~~~---~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~ 821 (903)
.|.+ .+.|+.|+|+..++++|+.|.+|++||+.+|..++.|.||.++|++++|+|+|++|++|+.| .|+|||+.++
T Consensus 530 ifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~ 609 (707)
T KOG0263|consen 530 IFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG 609 (707)
T ss_pred hhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC
Confidence 8876 46789999999999999999999999999999999999999999999999999999999999 9999999987
Q ss_pred CCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-------------------------EEccCCC
Q 002591 822 SEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-------------------------TLTAHEG 876 (903)
Q Consensus 822 ~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-------------------------~~~~h~~ 876 (903)
..+..+.+|.+.|.++.|+.+|..|++++.|.+|++||+..-... .+.....
T Consensus 610 ---~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~t 686 (707)
T KOG0263|consen 610 ---SLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNT 686 (707)
T ss_pred ---cchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCc
Confidence 677788889999999999999999999999999999998542211 2333455
Q ss_pred CEEEEEEecCCCEEEEE
Q 002591 877 LIAALAVSTETGYVASA 893 (903)
Q Consensus 877 ~V~sl~~spdg~~LaSg 893 (903)
+|.++.|..-+-.|++|
T Consensus 687 pv~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 687 PVVGLHFTRRNLLLAVG 703 (707)
T ss_pred eEEEEEEeccceeEEec
Confidence 78888887766555554
No 25
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=5.2e-31 Score=272.98 Aligned_cols=298 Identities=19% Similarity=0.262 Sum_probs=260.0
Q ss_pred CCcCCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECC
Q 002591 596 DPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSP 675 (903)
Q Consensus 596 ~~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fsp 675 (903)
.+.|...-+|++..+ .....+.+|.+.|+|+.|+.||.+||||+.+|.|+||+..++.....+......|.-++|+|
T Consensus 82 GGgDD~AflW~~~~g---e~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp 158 (399)
T KOG0296|consen 82 GGGDDLAFLWDISTG---EFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHP 158 (399)
T ss_pred cCCCceEEEEEccCC---cceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecc
Confidence 445555667777766 37788899999999999999999999999999999999999999999987778899999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----Cc
Q 002591 676 SMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----GT 751 (903)
Q Consensus 676 dg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----~~ 751 (903)
.+..|++|+.||.|.+|.+.+ ....+.+.||..++++=+|.|+|++++ ++..||+|++||..++..+..+.. ..
T Consensus 159 ~a~illAG~~DGsvWmw~ip~-~~~~kv~~Gh~~~ct~G~f~pdGKr~~-tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~ 236 (399)
T KOG0296|consen 159 RAHILLAGSTDGSVWMWQIPS-QALCKVMSGHNSPCTCGEFIPDGKRIL-TGYDDGTIIVWNPKTGQPLHKITQAEGLEL 236 (399)
T ss_pred cccEEEeecCCCcEEEEECCC-cceeeEecCCCCCcccccccCCCceEE-EEecCceEEEEecCCCceeEEecccccCcC
Confidence 999999999999999999997 467889999999999999999988665 999999999999999998877762 35
Q ss_pred eeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEec--------CCCCCeEEEEEcC---CCCEEEEEeCC-eEEEEECC
Q 002591 752 AQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQ--------GHTKPIDSVCWDP---SGELLASVSED-SVRVWTVG 819 (903)
Q Consensus 752 ~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~--------~h~~~V~sl~~sp---dg~~lasgs~d-~I~iwdl~ 819 (903)
.++.+...+..++.+..++.+++....+++.+.... .+...+.||.+.| .=.+.|+|+-| +|.|||+.
T Consensus 237 ~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a 316 (399)
T KOG0296|consen 237 PCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLA 316 (399)
T ss_pred CccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecc
Confidence 667788888889999999999999999999888776 3444555555544 55688999999 99999997
Q ss_pred CCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCc
Q 002591 820 SGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKF 898 (903)
Q Consensus 820 s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~ 898 (903)
.. .++..-.|...|..+.|-+ ..+|++++.+|.|+.||.++|.++ .+.+|...|.+++++|+.++++|+|.|++
T Consensus 317 ~~----~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~ 391 (399)
T KOG0296|consen 317 AS----TLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNT 391 (399)
T ss_pred cc----hhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCe
Confidence 64 3444555688899999998 789999999999999999999988 89999999999999999999999999999
Q ss_pred EEEcC
Q 002591 899 VKLWK 903 (903)
Q Consensus 899 I~IWd 903 (903)
.+||+
T Consensus 392 a~VF~ 396 (399)
T KOG0296|consen 392 ALVFE 396 (399)
T ss_pred EEEEe
Confidence 99985
No 26
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=2.3e-30 Score=320.65 Aligned_cols=282 Identities=18% Similarity=0.305 Sum_probs=238.2
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC----c----eeEEeccCCCCeEEEEECCC-CCEEEEEeCCCcE
Q 002591 619 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL----K----SKTNLEEHSSLITDVRFSPS-MPRLATSSFDKTV 689 (903)
Q Consensus 619 l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~----~----~~~~l~~h~~~V~~l~fspd-g~~Lasgs~Dg~I 689 (903)
+..|.+.|++++|+++|++||+|+.|++|+|||+.+. . ....+. +...|.+++|++. +.+|++++.||+|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v 557 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVV 557 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeE
Confidence 4569999999999999999999999999999997531 1 122333 3567999999874 7799999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec--CceeEEEe-cCCCEEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG--GTAQMRFQ-PHLGRYLAA 766 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~--~~~~v~~s-p~~~~ll~~ 766 (903)
+|||+.+ +..+..+.+|...|++++|+|....+|++|+.||+|++||++++.++..+.. .+.++.|. +++..++++
T Consensus 558 ~lWd~~~-~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latg 636 (793)
T PLN00181 558 QVWDVAR-SQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFG 636 (793)
T ss_pred EEEECCC-CeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEE
Confidence 9999987 6778889999999999999985556788999999999999999988877654 45667775 457889999
Q ss_pred EcCCeEEEEECCCCe-EEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC---CcceEEEeecCCCceEEEE
Q 002591 767 AAENVVSILDAETQA-CRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGS---EGECVHELSCNGNKFHSCV 841 (903)
Q Consensus 767 s~dg~I~i~D~~t~~-~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~---~~~~i~~~~~~~~~i~si~ 841 (903)
+.|+.|++||+++.+ .+..+.+|...|.++.|. ++.+|++++.| +|+|||++... ...++..+.+|...+..++
T Consensus 637 s~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~ 715 (793)
T PLN00181 637 SADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVG 715 (793)
T ss_pred eCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEE
Confidence 999999999999875 567788999999999997 67889999988 99999997542 2356778888999999999
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCcEE--------------EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 842 FHPTYPSLLVIGCYQSLELWNMSENKTM--------------TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 842 ~sp~g~~l~t~s~dg~I~vwdl~~~~~~--------------~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|++++.+|++|+.|+.|++|+......+ ....|...|.+++|++++.+|++|+.||.|+||+
T Consensus 716 ~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 716 LSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred EcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 9999999999999999999998655322 1133556799999999999999999999999996
No 27
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-31 Score=290.92 Aligned_cols=282 Identities=21% Similarity=0.386 Sum_probs=259.6
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
..+++..|+++|.||.|+|...+++++-+.|.|.|||.++-..++.+.....+|.+..|-.-.+++++|+.|..||||+.
T Consensus 5 ~krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfny 84 (794)
T KOG0276|consen 5 FKRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNY 84 (794)
T ss_pred hhhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEec
Confidence 34556679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC-eeeEEeecC---ceeEEEecCC-CEEEEEEcC
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG-SCTRVFKGG---TAQMRFQPHL-GRYLAAAAE 769 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~-~~~~~~~~~---~~~v~~sp~~-~~ll~~s~d 769 (903)
.+ ...+..|..|.+.|.||+.||..+++| ++++|-+|++||.+.+ .|..+|+++ +.+++|.|.+ +.+++++-|
T Consensus 85 nt-~ekV~~FeAH~DyIR~iavHPt~P~vL-tsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLD 162 (794)
T KOG0276|consen 85 NT-GEKVKTFEAHSDYIRSIAVHPTLPYVL-TSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLD 162 (794)
T ss_pred cc-ceeeEEeeccccceeeeeecCCCCeEE-ecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeecc
Confidence 98 788999999999999999999988666 9999999999999875 688889886 5678999977 678889999
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCC--CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSG--ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg--~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g 846 (903)
++|++|.+....+..++.+|...|+||+|-+-| .+|++|++| +|+|||..+. .|+.++.+|...|..+.|+|.-
T Consensus 163 rTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk---~CV~TLeGHt~Nvs~v~fhp~l 239 (794)
T KOG0276|consen 163 RTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK---SCVQTLEGHTNNVSFVFFHPEL 239 (794)
T ss_pred ccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH---HHHHHhhcccccceEEEecCCC
Confidence 999999999999999999999999999999855 499999999 9999999876 8999999999999999999999
Q ss_pred CEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 847 PSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 847 ~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
..|++|+.||+|+||+..+-+.. ++.-....|+|++-.+.++.++.|.+.|.|.|
T Consensus 240 piiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 240 PIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred cEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 99999999999999999988876 66667789999999999999999999988764
No 28
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.8e-31 Score=300.90 Aligned_cols=263 Identities=28% Similarity=0.466 Sum_probs=218.9
Q ss_pred ceEEEEeCCCceec---cCCCeeeeCCcchhhhhhccccccCCCCCceEEeeecCCCCCcCCCCcccccccCcceeeeeE
Q 002591 542 PLMMFGTDGAGTLT---SPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANS 618 (903)
Q Consensus 542 ~~i~~s~dg~~~~~---~~~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~ 618 (903)
.+.-|++|+..++. +..+++|.+...++...-+. .++..-++...|......|.. .-...++
T Consensus 382 ~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~------------~~l~~~d~~sad~~~~~~D~~---~~~~~~~ 446 (707)
T KOG0263|consen 382 TCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDA------------SDLSNIDTESADVDVDMLDDD---SSGTSRT 446 (707)
T ss_pred eeEeecCCcchhhccccccEEEEEecchhhhccccch------------hhhccccccccchhhhhcccc---CCceeEE
Confidence 35556677664443 66778999885433221100 011111111122222222222 3334556
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 619 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 619 l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
+.+|.++|+.+.|+|+.++|++++.|++||+|.+.+..++..+++|..+|+++.|+|.|-||||++.|++.++|..+. .
T Consensus 447 L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~-~ 525 (707)
T KOG0263|consen 447 LYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDH-N 525 (707)
T ss_pred eecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeeccc-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998 7
Q ss_pred ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEE
Q 002591 699 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSIL 775 (903)
Q Consensus 699 ~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~ 775 (903)
.+++.+.+|-+.|.|+.|||+.. ++++|+.|.+||+||+.+|.+++.|.++ +.+++|+|.|.++++|+.|+.|.||
T Consensus 526 ~PlRifaghlsDV~cv~FHPNs~-Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iW 604 (707)
T KOG0263|consen 526 KPLRIFAGHLSDVDCVSFHPNSN-YVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIW 604 (707)
T ss_pred CchhhhcccccccceEEECCccc-ccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEE
Confidence 89999999999999999999976 5669999999999999999999999764 6789999999999999999999999
Q ss_pred ECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 002591 776 DAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 776 D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~ 821 (903)
|+.+++.+..+.+|++.|.++.|+.+|.+||+++.| +|++||+...
T Consensus 605 Dl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 605 DLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred EcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 999999999999999999999999999999999999 9999999754
No 29
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=1.4e-32 Score=281.54 Aligned_cols=264 Identities=22% Similarity=0.466 Sum_probs=231.3
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS 700 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~ 700 (903)
.....|+|+.+..+ .+++|..|.+|+|||..+..+++.+.+|++.|.|+.|. .+.|++|+.|.+|+|||+.+ +++
T Consensus 195 e~skgVYClQYDD~--kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~t-ge~ 269 (499)
T KOG0281|consen 195 ENSKGVYCLQYDDE--KIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNT-GEP 269 (499)
T ss_pred ccCCceEEEEecch--hhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccC-Cch
Confidence 35678999998644 79999999999999999999999999999999999986 45999999999999999998 889
Q ss_pred eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe---eeEEeecC---ceeEEEecCCCEEEEEEcCCeEEE
Q 002591 701 LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS---CTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSI 774 (903)
Q Consensus 701 ~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~---~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i 774 (903)
+.++.+|...|..+.|+. .++++|+.|.+|.+||+.... +.+++.++ ++.+.|+ .+++++++.|.+|++
T Consensus 270 l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikv 344 (499)
T KOG0281|consen 270 LNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKV 344 (499)
T ss_pred hhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEE
Confidence 999999999999999983 377799999999999998754 33444444 4444454 458999999999999
Q ss_pred EECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEE
Q 002591 775 LDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIG 853 (903)
Q Consensus 775 ~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s 853 (903)
|++.+++++.++.+|...|.|+.+. ++++++|+.| +|++||+..+ .|+..+.+|+.-|.++.| +.+.|++|+
T Consensus 345 W~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G---~cLRvLeGHEeLvRciRF--d~krIVSGa 417 (499)
T KOG0281|consen 345 WSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG---ACLRVLEGHEELVRCIRF--DNKRIVSGA 417 (499)
T ss_pred Eeccceeeehhhhcccccceehhcc--CeEEEecCCCceEEEEecccc---HHHHHHhchHHhhhheee--cCceeeecc
Confidence 9999999999999999999988775 8999999999 9999999887 899999999999999999 456899999
Q ss_pred CCCeEEEEECCCCcE----------EEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 854 CYQSLELWNMSENKT----------MTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 854 ~dg~I~vwdl~~~~~----------~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.||+|+|||+..+.- ..+..|.+.|..+.| |...|+++++|.+|.|||
T Consensus 418 YDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 418 YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 475 (499)
T ss_pred ccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEE
Confidence 999999999976531 256679999999999 456799999999999997
No 30
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=3.6e-31 Score=294.97 Aligned_cols=349 Identities=21% Similarity=0.345 Sum_probs=264.3
Q ss_pred EEEEeCCCceec--cCCCeeeeCCcchhhhhhccccccCCCCCceEEe-eecCCC----CCcCCCCcccccccCcceeee
Q 002591 544 MMFGTDGAGTLT--SPSNQLWDDKDLELRADMDRLVEDGSLDDNVESF-LSHDDT----DPRDAGGRGMDVSQGFSFKEA 616 (903)
Q Consensus 544 i~~s~dg~~~~~--~~~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~-~~~d~~----~~~~~~~~~~d~~~~~~~~~~ 616 (903)
+.|+++|..++. .+.+.+-|+.++... +. +.... .++.+..+ +.+|+. ..+....++|.+..+ +.+
T Consensus 25 ~~~s~nG~~L~t~~~d~Vi~idv~t~~~~--l~-s~~~e-d~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tg---k~i 97 (775)
T KOG0319|consen 25 VAWSSNGQHLYTACGDRVIIIDVATGSIA--LP-SGSNE-DEDEITALALTPDEEVLVTASRSQLLRVWSLPTG---KLI 97 (775)
T ss_pred eeECCCCCEEEEecCceEEEEEccCCcee--cc-cCCcc-chhhhheeeecCCccEEEEeeccceEEEEEcccc---hHh
Confidence 788889887666 444566777777552 11 11111 11112222 222221 122334456666654 777
Q ss_pred eEeec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC--EEEEEeCCCcEEEEe
Q 002591 617 NSVRA-STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP--RLATSSFDKTVRVWD 693 (903)
Q Consensus 617 ~~l~~-H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~--~Lasgs~Dg~I~IWD 693 (903)
+.++. |+.+|.-++|+|.|.+|++|+.|+.|+|||+..+.+...|++|.+.|.++.|+|+-. .|++|..|+.|++||
T Consensus 98 rswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwn 177 (775)
T KOG0319|consen 98 RSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWN 177 (775)
T ss_pred HhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCCCceEEEEE
Confidence 77887 999999999999999999999999999999999999999999999999999999865 589999999999999
Q ss_pred CCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe--------------------------
Q 002591 694 ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF-------------------------- 747 (903)
Q Consensus 694 l~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~-------------------------- 747 (903)
+.+...++.++..|.+.|++++|.+++..++ +++.|..|.|||+...++.++.
T Consensus 178 l~~~~tcl~~~~~H~S~vtsL~~~~d~~~~l-s~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~Ta 256 (775)
T KOG0319|consen 178 LNDKRTCLHTMILHKSAVTSLAFSEDSLELL-SVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITA 256 (775)
T ss_pred cccCchHHHHHHhhhhheeeeeeccCCceEE-EeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEe
Confidence 9976667889999999999999999977666 8888999999997543211110
Q ss_pred ---------e-----------c----------------------------------------------CceeEE------
Q 002591 748 ---------K-----------G----------------------------------------------GTAQMR------ 755 (903)
Q Consensus 748 ---------~-----------~----------------------------------------------~~~~v~------ 755 (903)
. . .+..++
T Consensus 257 G~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~ 336 (775)
T KOG0319|consen 257 GGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEE 336 (775)
T ss_pred cCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCcc
Confidence 0 0 000000
Q ss_pred ----------------------------------E--ecCCCEEEEEEcCCeEEEEECCCCe------------------
Q 002591 756 ----------------------------------F--QPHLGRYLAAAAENVVSILDAETQA------------------ 781 (903)
Q Consensus 756 ----------------------------------~--sp~~~~ll~~s~dg~I~i~D~~t~~------------------ 781 (903)
. ...+-.+++++.|.++++|.++++.
T Consensus 337 ~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svga 416 (775)
T KOG0319|consen 337 SHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGA 416 (775)
T ss_pred ceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccce
Confidence 0 0122255555666666666442110
Q ss_pred ----------------------------------EEE----EecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC
Q 002591 782 ----------------------------------CRL----SLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGS 822 (903)
Q Consensus 782 ----------------------------------~~~----~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~ 822 (903)
.+. +...|...|+|++++|+.++|+||+.| +.+||++..
T Consensus 417 va~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~-- 494 (775)
T KOG0319|consen 417 VAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ-- 494 (775)
T ss_pred eeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC--
Confidence 000 123577888999999999999999999 899999974
Q ss_pred CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 823 EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 823 ~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
......+.+|...|.++.|++....+++++.|++|+||.+.+..++ ++.+|...|..+.|-.+++.|+||+.||.|+|
T Consensus 495 -~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKl 573 (775)
T KOG0319|consen 495 -LRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKL 573 (775)
T ss_pred -ceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEE
Confidence 3788899999999999999999999999999999999999999999 89999999999999999999999999999999
Q ss_pred cC
Q 002591 902 WK 903 (903)
Q Consensus 902 Wd 903 (903)
|+
T Consensus 574 Wn 575 (775)
T KOG0319|consen 574 WN 575 (775)
T ss_pred Ee
Confidence 96
No 31
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.98 E-value=3.1e-30 Score=260.16 Aligned_cols=243 Identities=24% Similarity=0.442 Sum_probs=218.5
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC------ceeEEeccCCCCeEEEEECCCCCEEEEEeCCCc
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL------KSKTNLEEHSSLITDVRFSPSMPRLATSSFDKT 688 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~------~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~ 688 (903)
.+..+.-...-|..++|+|.|+++|.|+-|+...||++.+. +..+.+.+|++.+.|+.|-.| ..|+|++.|.+
T Consensus 89 K~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~T 167 (343)
T KOG0286|consen 89 KVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMT 167 (343)
T ss_pred ceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCce
Confidence 34445556778999999999999999999999999999854 456778999999999999984 58999999999
Q ss_pred EEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEE
Q 002591 689 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLA 765 (903)
Q Consensus 689 I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~ 765 (903)
+.+||+++ +..+..|.+|.+.|.+|++.|...+.+++|+-|+..++||++.+.++..|.++ ++.++|.|+|.-|++
T Consensus 168 CalWDie~-g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afat 246 (343)
T KOG0286|consen 168 CALWDIET-GQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFAT 246 (343)
T ss_pred EEEEEccc-ceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeee
Confidence 99999998 88899999999999999999955556779999999999999999999999864 778999999999999
Q ss_pred EEcCCeEEEEECCCCeEEEEecC--CCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEE
Q 002591 766 AAAENVVSILDAETQACRLSLQG--HTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVF 842 (903)
Q Consensus 766 ~s~dg~I~i~D~~t~~~~~~l~~--h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~ 842 (903)
++.|+++++||++....+..+.. ...+|++++|+-.|++|++|..| ++.+||.-.+ +.+..+.+|++.|.++..
T Consensus 247 GSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~---e~vg~L~GHeNRvScl~~ 323 (343)
T KOG0286|consen 247 GSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKG---ERVGVLAGHENRVSCLGV 323 (343)
T ss_pred cCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeecccc---ceEEEeeccCCeeEEEEE
Confidence 99999999999999888777763 34579999999999999999888 9999999766 677888899999999999
Q ss_pred eCCCCEEEEEECCCeEEEEE
Q 002591 843 HPTYPSLLVIGCYQSLELWN 862 (903)
Q Consensus 843 sp~g~~l~t~s~dg~I~vwd 862 (903)
+|||..+++|+.|..|+||.
T Consensus 324 s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 324 SPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCCCcEEEecchhHheeecC
Confidence 99999999999999999994
No 32
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.98 E-value=1.2e-29 Score=282.71 Aligned_cols=278 Identities=20% Similarity=0.315 Sum_probs=252.0
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCc
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF-DKTVRVWDADNPGY 699 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~-Dg~I~IWDl~~~~~ 699 (903)
.....|+|++|++..+.||+|-..|.+.+|++....+++.+.-....|..+.|+..|.+||.||. -|.+.||+..+ ..
T Consensus 263 ~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs-Es 341 (893)
T KOG0291|consen 263 QNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS-ES 341 (893)
T ss_pred ccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeec-cc
Confidence 34488999999999999999999999999999999999999998899999999999999999986 48999999998 44
Q ss_pred eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 700 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 700 ~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
-+....+|...|++++++|||. ++++|++||.|+|||..++-|..+|..+ ++.+.|+..++.+++++-||+|+.||
T Consensus 342 YVlKQQgH~~~i~~l~YSpDgq-~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwD 420 (893)
T KOG0291|consen 342 YVLKQQGHSDRITSLAYSPDGQ-LIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWD 420 (893)
T ss_pred eeeeccccccceeeEEECCCCc-EEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeee
Confidence 4666778999999999999977 6679999999999999999999999764 56788999999999999999999999
Q ss_pred CCCCeEEEEecCC-CCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEE
Q 002591 777 AETQACRLSLQGH-TKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIG 853 (903)
Q Consensus 777 ~~t~~~~~~l~~h-~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s 853 (903)
+...+..+++... .....|++.+|.|.++++|+.| .|.||++.+| +.+..+.+|+++|.+++|+|.+..|++++
T Consensus 421 lkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTG---qllDiLsGHEgPVs~l~f~~~~~~LaS~S 497 (893)
T KOG0291|consen 421 LKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTG---QLLDILSGHEGPVSGLSFSPDGSLLASGS 497 (893)
T ss_pred ecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecC---eeeehhcCCCCcceeeEEccccCeEEecc
Confidence 9999999998863 3457889999999999999999 8999999998 78889999999999999999999999999
Q ss_pred CCCeEEEEECCCC-cEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 854 CYQSLELWNMSEN-KTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 854 ~dg~I~vwdl~~~-~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.|++|++||+-.. ..+....+...|.+++|+|+|+-||++.-||.|.|||
T Consensus 498 WDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 498 WDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred ccceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence 9999999998654 3445556778899999999999999999999999997
No 33
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=1.3e-30 Score=255.31 Aligned_cols=281 Identities=19% Similarity=0.326 Sum_probs=240.4
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
+-+....+..|.++|.++.|+-||+|.++++.|++|++|+...+.+++++.+|...|.+++.+.|+..|++|+.|+.|.+
T Consensus 6 ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~v 85 (307)
T KOG0316|consen 6 PTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQV 85 (307)
T ss_pred cchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEE
Confidence 33566778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe--eeEEeec---CceeEEEecCCCEEEEE
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS--CTRVFKG---GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~--~~~~~~~---~~~~v~~sp~~~~ll~~ 766 (903)
||+.+ ++.++.|.+|...|..+.|+.+. .++++|+.|..|++||.++.. .+.++.. .+.++ .-.+..|+++
T Consensus 86 wDV~T-Gkv~Rr~rgH~aqVNtV~fNees-SVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si--~v~~heIvaG 161 (307)
T KOG0316|consen 86 WDVNT-GKVDRRFRGHLAQVNTVRFNEES-SVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSI--DVAEHEIVAG 161 (307)
T ss_pred EEccc-CeeeeecccccceeeEEEecCcc-eEEEeccccceeEEEEcccCCCCccchhhhhcCceeEE--EecccEEEee
Confidence 99998 88999999999999999999875 477899999999999998754 4555443 34444 4455789999
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCc--eEEEEEe
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNK--FHSCVFH 843 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~--i~si~~s 843 (903)
+.||+++.||++.|.....+.+ .+|+|++|+++++.+.+++.| +|++.|-.++ +.+..+++|.+. -..|++.
T Consensus 162 S~DGtvRtydiR~G~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tG---klL~sYkGhkn~eykldc~l~ 236 (307)
T KOG0316|consen 162 SVDGTVRTYDIRKGTLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETG---KLLKSYKGHKNMEYKLDCCLN 236 (307)
T ss_pred ccCCcEEEEEeecceeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchh---HHHHHhcccccceeeeeeeec
Confidence 9999999999999988766554 689999999999988888888 9999999888 666666666654 3456777
Q ss_pred CCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCC-EEEEEEecCCCEEEEEecCCcEEEc
Q 002591 844 PTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGL-IAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~-V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
....+++.|+.||.|++||+.....+ .+..+... |.+++++|....|+++.. +.+.+|
T Consensus 237 qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~ 296 (307)
T KOG0316|consen 237 QSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFW 296 (307)
T ss_pred ccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceece
Confidence 78889999999999999999999888 56666666 899999998887888754 445555
No 34
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=1.8e-30 Score=288.95 Aligned_cols=279 Identities=23% Similarity=0.401 Sum_probs=254.9
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
..+.+|...|.+++||.+...+++|+ .+.|+||+.++.++++++... .+.|..|.|.++++++|...|.+.|||+.+
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS 443 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLAS 443 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeeh
Confidence 35678999999999999988888775 568999999999999999765 899999999999999999999999999998
Q ss_pred CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC--------e-------eeEEeecCceeEEEecCCC
Q 002591 697 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG--------S-------CTRVFKGGTAQMRFQPHLG 761 (903)
Q Consensus 697 ~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~--------~-------~~~~~~~~~~~v~~sp~~~ 761 (903)
...+.++..|.+.|++++.+|++..++ +++.|.+|++||..-. + ..-.+...+.++.++|++.
T Consensus 444 -~~l~Eti~AHdgaIWsi~~~pD~~g~v-T~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk 521 (888)
T KOG0306|consen 444 -ASLVETIRAHDGAIWSISLSPDNKGFV-TGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGK 521 (888)
T ss_pred -hhhhhhhhccccceeeeeecCCCCceE-EecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCc
Confidence 677888889999999999999988766 9999999999997521 1 1122345788999999999
Q ss_pred EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEE
Q 002591 762 RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSC 840 (903)
Q Consensus 762 ~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si 840 (903)
+++++--|++|+||-+++.+....+.||.-||.|+.++||+++++||+.| +|+||-+.-| .|.+.+..|...|.++
T Consensus 522 ~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFG---DCHKS~fAHdDSvm~V 598 (888)
T KOG0306|consen 522 LLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG---DCHKSFFAHDDSVMSV 598 (888)
T ss_pred EEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccc---hhhhhhhcccCceeEE
Confidence 99999999999999999999999999999999999999999999999999 9999999776 8899999999999999
Q ss_pred EEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 841 VFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 841 ~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.|.|....+++++.|+.|+-||-...+.+ .+.+|...|+|++.+|+|.+++++|+|.+|++|.
T Consensus 599 ~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 599 QFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred EEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeee
Confidence 99999999999999999999999888877 8999999999999999999999999999999994
No 35
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.97 E-value=7e-32 Score=282.52 Aligned_cols=272 Identities=24% Similarity=0.415 Sum_probs=231.5
Q ss_pred EEeeecCCCCCcCCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEecc-CC
Q 002591 587 ESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HS 665 (903)
Q Consensus 587 ~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~-h~ 665 (903)
..|..++...........+.++++..|.....+.+|.++|+++.|+++|.++++|+.+|.|++|+..- ..++.+.. |.
T Consensus 102 v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm-nnVk~~~ahh~ 180 (464)
T KOG0284|consen 102 VRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM-NNVKIIQAHHA 180 (464)
T ss_pred EEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch-hhhHHhhHhhh
Confidence 33444333444444555667777778888889999999999999999999999999999999999764 34444544 55
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE
Q 002591 666 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 745 (903)
Q Consensus 666 ~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~ 745 (903)
..|++++|+|+...|++++.||+|+|||... .+.-+.+.+|.-.|.+++|+|... +|++++.|..|++||.+++.|+.
T Consensus 181 eaIRdlafSpnDskF~t~SdDg~ikiWdf~~-~kee~vL~GHgwdVksvdWHP~kg-LiasgskDnlVKlWDprSg~cl~ 258 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM-PKEERVLRGHGWDVKSVDWHPTKG-LIASGSKDNLVKLWDPRSGSCLA 258 (464)
T ss_pred hhhheeccCCCCceeEEecCCCeEEEEeccC-CchhheeccCCCCcceeccCCccc-eeEEccCCceeEeecCCCcchhh
Confidence 9999999999999999999999999999987 556677899999999999999855 78899999999999999999988
Q ss_pred Eeec---CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCC-CEEEEEeCC-eEEEEECCC
Q 002591 746 VFKG---GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSG-ELLASVSED-SVRVWTVGS 820 (903)
Q Consensus 746 ~~~~---~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg-~~lasgs~d-~I~iwdl~s 820 (903)
++.. -+..+.|.+++++|++++.|..+++||+++.+.+.++++|+..|+++.|+|-. .+|++|+.| .|..|.+..
T Consensus 259 tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~ 338 (464)
T KOG0284|consen 259 TLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGL 338 (464)
T ss_pred hhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEeccc
Confidence 7654 46678899999999999999999999999999999999999999999999954 488888888 999999873
Q ss_pred CCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 002591 821 GSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 821 ~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl 863 (903)
.+ .....-..|+..|.+++|+|-|..|++|+.|.++++|.-
T Consensus 339 ~~--p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 339 EE--PLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cc--cccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 32 222333567899999999999999999999999999975
No 36
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.97 E-value=3.1e-29 Score=269.85 Aligned_cols=282 Identities=21% Similarity=0.392 Sum_probs=245.4
Q ss_pred eeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC--CceeEEeccCCCCeEEEEECCCCCEEEEEeCC----C
Q 002591 614 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT--LKSKTNLEEHSSLITDVRFSPSMPRLATSSFD----K 687 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t--~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D----g 687 (903)
..+..+.+|...++-..|+|.|-|+|+|...|+|||||... .-++.++....++|.+|.|+.++++|++.++. |
T Consensus 50 ~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg 129 (603)
T KOG0318|consen 50 ASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFG 129 (603)
T ss_pred cceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCcccee
Confidence 34667788999999999999999999999999999999763 33455677889999999999999999887752 4
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEE
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYL 764 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll 764 (903)
.+.+||. +..+-.+.+|...|.+++|-|..+.-+++|++|++|.+|+=.-.+...++.. -+.+++|+|++.+|+
T Consensus 130 ~~F~~DS---G~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fa 206 (603)
T KOG0318|consen 130 HVFLWDS---GNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFA 206 (603)
T ss_pred EEEEecC---CCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEE
Confidence 4666765 4568889999999999999999999999999999999998666565555443 478999999999999
Q ss_pred EEEcCCeEEEEECCCCeEEEEec---CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCC---Cce
Q 002591 765 AAAAENVVSILDAETQACRLSLQ---GHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNG---NKF 837 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~~~~~~l~---~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~---~~i 837 (903)
+++.||+|.|||-.+++.+..+. +|.+.|.+++|+||+..|++++.| +++|||+.+. .++.++.... ...
T Consensus 207 t~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~---slv~t~~~~~~v~dqq 283 (603)
T KOG0318|consen 207 TAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTN---SLVSTWPMGSTVEDQQ 283 (603)
T ss_pred EecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeecc---ceEEEeecCCchhceE
Confidence 99999999999999999999998 799999999999999999999999 9999999887 5666554432 345
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 838 HSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
..|.|- ...|++.+.+|.|.+++....... .+.+|...|+++..++++++|++|+.||.|.-|+
T Consensus 284 vG~lWq--kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~ 348 (603)
T KOG0318|consen 284 VGCLWQ--KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWD 348 (603)
T ss_pred EEEEEe--CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEe
Confidence 667776 567999999999999999998866 8889999999999999999999999999999996
No 37
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=3.3e-31 Score=268.94 Aligned_cols=277 Identities=25% Similarity=0.433 Sum_probs=245.2
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec--------cCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE--------EHSSLITDVRFSPSMPRLATSSFDKTVRVW 692 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~--------~h~~~V~~l~fspdg~~Lasgs~Dg~I~IW 692 (903)
+...-+.|..|+|||.+|++|+.||-|.|||..+|+..+.++ -+..+|.|++|+.|...|++|+.||.|+||
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 345668899999999999999999999999999998877654 478999999999999999999999999999
Q ss_pred eCCCCCceeEEec-cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEc
Q 002591 693 DADNPGYSLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 693 Dl~~~~~~~~~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~ 768 (903)
.+.+ +.|++.|. .|+..|+|+.|+.|+..++ +++.|.+|+|.-+++|++++.|+++ ++...|.++|..++++++
T Consensus 291 ri~t-G~ClRrFdrAHtkGvt~l~FSrD~SqiL-S~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSs 368 (508)
T KOG0275|consen 291 RIET-GQCLRRFDRAHTKGVTCLSFSRDNSQIL-SASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASS 368 (508)
T ss_pred EEec-chHHHHhhhhhccCeeEEEEccCcchhh-cccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecC
Confidence 9998 78888887 8999999999999988776 9999999999999999999999886 456789999999999999
Q ss_pred CCeEEEEECCCCeEEEEecC--CCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEee---cCCCceEEEE
Q 002591 769 ENVVSILDAETQACRLSLQG--HTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELS---CNGNKFHSCV 841 (903)
Q Consensus 769 dg~I~i~D~~t~~~~~~l~~--h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~---~~~~~i~si~ 841 (903)
||+|++|+.++.+|+.+++. ...+|.++..-|... .+++|... +|+|.++.. ..++.+. ..++.+.+++
T Consensus 369 DgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG----QvVrsfsSGkREgGdFi~~~ 444 (508)
T KOG0275|consen 369 DGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG----QVVRSFSSGKREGGDFINAI 444 (508)
T ss_pred CccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc----eEEeeeccCCccCCceEEEE
Confidence 99999999999999998875 456788888888554 66666666 999998853 3444443 3456788999
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 842 FHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 842 ~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.+|.|.++++.+.|+.++.|.+.+|++. ++..|+..|..++-+|..+.|++-++||.+++|+
T Consensus 445 lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 445 LSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred ecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 9999999999999999999999999987 7889999999999999999999999999999996
No 38
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2e-30 Score=268.37 Aligned_cols=256 Identities=27% Similarity=0.505 Sum_probs=230.8
Q ss_pred CCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEeccCCCCeEEEEECCCCC
Q 002591 600 AGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT-LKSKTNLEEHSSLITDVRFSPSMP 678 (903)
Q Consensus 600 ~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t-~~~~~~l~~h~~~V~~l~fspdg~ 678 (903)
...++||..++ .....+++|++.|.+|+|+..|++||+++.|-.+++||.++ .++++.+.+|...|.+++|-|.|.
T Consensus 130 ~tikv~D~~tg---~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd 206 (406)
T KOG0295|consen 130 ATIKVFDTETG---ELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGD 206 (406)
T ss_pred ceEEEEEccch---hhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCC
Confidence 34455555544 45889999999999999999999999999998899999986 678889999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe---ecCceeEE
Q 002591 679 RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF---KGGTAQMR 755 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~---~~~~~~v~ 755 (903)
+|++++.|.+|+.|++.+ +.++.+|.+|...|..++.+.||. ++++|+.|.+|++|-+.++.|...+ +..+.+++
T Consensus 207 ~ilS~srD~tik~We~~t-g~cv~t~~~h~ewvr~v~v~~DGt-i~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~ 284 (406)
T KOG0295|consen 207 HILSCSRDNTIKAWECDT-GYCVKTFPGHSEWVRMVRVNQDGT-IIASCSNDQTLRVWVVATKQCKAELREHEHPVECIA 284 (406)
T ss_pred eeeecccccceeEEeccc-ceeEEeccCchHhEEEEEecCCee-EEEecCCCceEEEEEeccchhhhhhhccccceEEEE
Confidence 999999999999999998 899999999999999999998865 8889999999999999999665444 44567777
Q ss_pred EecCC---------------CEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 002591 756 FQPHL---------------GRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVG 819 (903)
Q Consensus 756 ~sp~~---------------~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~ 819 (903)
|.|.. ..+.+++.|++|++||+.++.++.++.+|..+|..++|+|.|+||+++.+| ++++||++
T Consensus 285 wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 285 WAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK 364 (406)
T ss_pred ecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence 66531 377788889999999999999999999999999999999999999999999 99999998
Q ss_pred CCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 002591 820 SGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 820 s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl 863 (903)
+. .|.+.+..|..-++++.|+.+..++++|+-|..+++|..
T Consensus 365 ~~---~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 365 NL---QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred cc---eeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 87 899999999999999999999999999999999999974
No 39
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=1.1e-30 Score=257.74 Aligned_cols=278 Identities=22% Similarity=0.321 Sum_probs=247.1
Q ss_pred EeecCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 618 SVRASTSKVICCHFSS---DGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 618 ~l~~H~~~V~~l~fsp---dg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
+..+|+.+|..++||| +|-+|++++.|+.-.+-+-+++.-+-+|.+|.+.|+..+++.+..+.++++.|-+.+|||.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a 88 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDA 88 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhh
Confidence 4578999999999986 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee----eEEeecCceeEEEecCCCEEEEEEcCC
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC----TRVFKGGTAQMRFQPHLGRYLAAAAEN 770 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~----~~~~~~~~~~v~~sp~~~~ll~~s~dg 770 (903)
-+ +..+..|. |..-|.+++|+.|.++++ +|+.+..+||||++..+. +.-..+.+..+.|...+..|++++.|+
T Consensus 89 ~t-gdelhsf~-hkhivk~~af~~ds~~ll-tgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~ 165 (334)
T KOG0278|consen 89 VT-GDELHSFE-HKHIVKAVAFSQDSNYLL-TGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDK 165 (334)
T ss_pred hh-hhhhhhhh-hhheeeeEEecccchhhh-ccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCC
Confidence 98 66677775 888899999999987666 999999999999987652 233445677888999999999999999
Q ss_pred eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEE
Q 002591 771 VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLL 850 (903)
Q Consensus 771 ~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~ 850 (903)
+|++||.+++..+..+. ...+|+++.++++|++|.++....|++||..+. ..++.++. ...|.+...+|+...++
T Consensus 166 tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf---~~lKs~k~-P~nV~SASL~P~k~~fV 240 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSF---GLLKSYKM-PCNVESASLHPKKEFFV 240 (334)
T ss_pred ceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEecCceeEEeccccc---cceeeccC-ccccccccccCCCceEE
Confidence 99999999999999887 678899999999999998888779999999876 34444333 56788999999999999
Q ss_pred EEECCCeEEEEECCCCcEE-E-EccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 851 VIGCYQSLELWNMSENKTM-T-LTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 851 t~s~dg~I~vwdl~~~~~~-~-~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+|+.|..++.||+.+++.+ . ..+|.++|.|+.|+|+|...++||.||+|+||.
T Consensus 241 aGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 241 AGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred ecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEE
Confidence 9999999999999999988 3 379999999999999999999999999999993
No 40
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.97 E-value=6.5e-29 Score=276.63 Aligned_cols=343 Identities=18% Similarity=0.292 Sum_probs=252.1
Q ss_pred CCCceec--cCCCeeeeCCcchhhhhhccccccCCCCCceEEeeecCCCC-----CcCCCCcccccccCcceeeeeEeec
Q 002591 549 DGAGTLT--SPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTD-----PRDAGGRGMDVSQGFSFKEANSVRA 621 (903)
Q Consensus 549 dg~~~~~--~~~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~~~~d~~~-----~~~~~~~~~d~~~~~~~~~~~~l~~ 621 (903)
.|.+.+. ...+.+||+++|+....+-..... ..+.+....++.. -.|+.+++|+...+ ....++.+
T Consensus 33 ~Gr~va~~a~E~vn~WdlRtge~~~~l~~~~~k----~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~---~~~~tfng 105 (888)
T KOG0306|consen 33 KGRAVAVSALEQVNIWDLRTGEIEKKLILLKKK----AEVTCLRSSDDILLLAVGYADGSVQIFSLESE---EILITFNG 105 (888)
T ss_pred CCcEEEEeccccEeEEeeecchhhhhhhhhccc----ceEEEeeccCCcceEEEEecCceEEeeccCCC---ceeeeecc
Confidence 3665554 335578999999766554321111 2344445545544 24566677766644 67788999
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
|...|+++.|+..|.+||+|+.|+.|.|||+-...-...+++|.+.|+..-|..+.++|++.|.|+.|++||+++ ..|+
T Consensus 106 HK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~t-qhCf 184 (888)
T KOG0306|consen 106 HKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLET-QHCF 184 (888)
T ss_pred cccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEeccc-ceee
Confidence 999999999999999999999999999999998888999999999999999999889999999999999999997 6677
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEc-------------------------------------------
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI------------------------------------------- 738 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi------------------------------------------- 738 (903)
.+...|...|+.+++++ .++++++.|+.+++|++
T Consensus 185 ~Thvd~r~Eiw~l~~~~---~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c 261 (888)
T KOG0306|consen 185 ETHVDHRGEIWALVLDE---KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVC 261 (888)
T ss_pred eEEecccceEEEEEEec---ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEE
Confidence 77777777777777765 24456666777777776
Q ss_pred --------------------------------------------------------------------------------
Q 002591 739 -------------------------------------------------------------------------------- 738 (903)
Q Consensus 739 -------------------------------------------------------------------------------- 738 (903)
T Consensus 262 ~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l 341 (888)
T KOG0306|consen 262 QGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLL 341 (888)
T ss_pred ecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEe
Confidence
Q ss_pred ------------------------------------------------------------CCCeeeEEeecC-ceeEEEe
Q 002591 739 ------------------------------------------------------------NNGSCTRVFKGG-TAQMRFQ 757 (903)
Q Consensus 739 ------------------------------------------------------------~t~~~~~~~~~~-~~~v~~s 757 (903)
.+.+|++++... +.+.+|.
T Consensus 342 ~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~~y~l~~~Fv 421 (888)
T KOG0306|consen 342 ANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITCGYILASKFV 421 (888)
T ss_pred ecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEeccccEEEEEec
Confidence 222222222111 1112222
Q ss_pred cCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCC-----cceEE---
Q 002591 758 PHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSE-----GECVH--- 828 (903)
Q Consensus 758 p~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~-----~~~i~--- 828 (903)
|.+.++++|...|.+.+||+.....+.++.+|.+.|.+++.+||++.+++++.| +|++||+.--.. .+.+.
T Consensus 422 pgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~ 501 (888)
T KOG0306|consen 422 PGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKH 501 (888)
T ss_pred CCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeecc
Confidence 333333333333333333333333333456789999999999999999999999 999999853211 11111
Q ss_pred -EeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 829 -ELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 829 -~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
..-.-...|.++.++||+++|+++--|.+|+||-+.+-+.. .+.+|.-+|.|+..+||+++++|||.|..|+||
T Consensus 502 ~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiW 577 (888)
T KOG0306|consen 502 TRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIW 577 (888)
T ss_pred ceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEe
Confidence 01112567899999999999999999999999999998877 899999999999999999999999999999999
No 41
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=8.1e-30 Score=287.17 Aligned_cols=281 Identities=22% Similarity=0.378 Sum_probs=251.4
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
.|+..+..|..++|+|...+++++-..|.|.+||..-+.++..|.+|.++|..|+|+|...++++|++|-+|+||+.++
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~- 82 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKT- 82 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEeccc-
Confidence 3556678899999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEE
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSI 774 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i 774 (903)
.+|+.++.||-+.|..+.||+.-..+| ++++|-+|+||+..+++|+.++.++ +.|..|+|....+++++-|-+|+|
T Consensus 83 rrclftL~GHlDYVRt~~FHheyPWIl-SASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRV 161 (1202)
T KOG0292|consen 83 RRCLFTLLGHLDYVRTVFFHHEYPWIL-SASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRV 161 (1202)
T ss_pred ceehhhhccccceeEEeeccCCCceEE-EccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEE
Confidence 889999999999999999999987555 9999999999999999999999886 456779999999999999999999
Q ss_pred EECCCC-----------------------------eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCc
Q 002591 775 LDAETQ-----------------------------ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEG 824 (903)
Q Consensus 775 ~D~~t~-----------------------------~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~ 824 (903)
||+... -..+.+++|...|+-++|+|.-.+|++|++| .|++|.+... +.
T Consensus 162 WDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnet-Ka 240 (1202)
T KOG0292|consen 162 WDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNET-KA 240 (1202)
T ss_pred EeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccc-cc
Confidence 997521 1234678999999999999999999999999 9999999753 33
Q ss_pred ceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 825 ECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 825 ~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
..+.+..+|.+.|.++.|||..+.|++.+.|++|+|||+...+.+ ++....+..+.++.+|..++++.|- |+-+.+|
T Consensus 241 WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgH-DsGm~VF 318 (1202)
T KOG0292|consen 241 WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGH-DSGMIVF 318 (1202)
T ss_pred eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeec-CCceEEE
Confidence 567778899999999999999999999999999999999999888 6667778899999999999887764 5545454
No 42
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.97 E-value=8.6e-30 Score=253.90 Aligned_cols=279 Identities=16% Similarity=0.257 Sum_probs=236.9
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
.+.+|..+++-|.|+.+|.+|++++.|.++.||-..+|+.+-++.+|.+.|+|++.+-+.++|++|+.|.++++||+++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t- 83 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET- 83 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC-
Confidence 4678999999999999999999999999999999889999999999999999999999999999999999999999998
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEe----CCCcEEEEEcCC-------CeeeEEee---cCceeEEEecCCCEE
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCD----GDGEIRYWSINN-------GSCTRVFK---GGTAQMRFQPHLGRY 763 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs----~Dg~I~iwDi~t-------~~~~~~~~---~~~~~v~~sp~~~~l 763 (903)
++.+..++ ...+|..+.|+.+++.++++.. ..+.|.++|++. .++...+. ..+...-|.|.+..|
T Consensus 84 Gk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i 162 (327)
T KOG0643|consen 84 GKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI 162 (327)
T ss_pred CcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE
Confidence 77888777 5678999999999886665432 347899999983 33344433 356677899999999
Q ss_pred EEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEE
Q 002591 764 LAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCV 841 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~ 841 (903)
++|..+|.|.+||++++ +.+.....|...|+.+++++|..++++++.| +.++||+++. .+++.+.. +.+|++.+
T Consensus 163 i~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl---~v~Kty~t-e~PvN~aa 238 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL---EVLKTYTT-ERPVNTAA 238 (327)
T ss_pred EEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccce---eeEEEeee-ccccccee
Confidence 99999999999999998 4555567799999999999999999999999 9999999876 56666555 78999999
Q ss_pred EeCCCCEEEEEECCCeEEE--EECCCC------------cEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 842 FHPTYPSLLVIGCYQSLEL--WNMSEN------------KTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 842 ~sp~g~~l~t~s~dg~I~v--wdl~~~------------~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
++|...+++.++.-....| =+.+.+ +.+ .+.+|-++|++++|+|+|+..++|++||.|||.
T Consensus 239 isP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 239 ISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred cccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence 9999988888876542222 222222 223 678999999999999999999999999999984
No 43
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.97 E-value=2.3e-29 Score=260.81 Aligned_cols=286 Identities=19% Similarity=0.275 Sum_probs=244.1
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
.+.+|..|++.|.+|+.+|+.+++|||+.|..-.||++.++.....+.+|++.|+++.|+.+|.+||||+.+|.|+||+.
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~ 135 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV 135 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCe
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENV 771 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~ 771 (903)
.+ +.....+...-..|.-++|||.+. +|++|+.||.|.+|.+.++...+.+.++ .++-+|.|+|++++++..||+
T Consensus 136 st-g~~~~~~~~e~~dieWl~WHp~a~-illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgt 213 (399)
T KOG0296|consen 136 ST-GGEQWKLDQEVEDIEWLKWHPRAH-ILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGT 213 (399)
T ss_pred cc-CceEEEeecccCceEEEEeccccc-EEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCce
Confidence 98 555666666667788899999755 6669999999999999998888888775 445669999999999999999
Q ss_pred EEEEECCCCeEEEEecCC-CCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEE-----eecCC---CceEEEE
Q 002591 772 VSILDAETQACRLSLQGH-TKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHE-----LSCNG---NKFHSCV 841 (903)
Q Consensus 772 I~i~D~~t~~~~~~l~~h-~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~-----~~~~~---~~i~si~ 841 (903)
|++|+.+++.+++.+... .....++.++..+..++.|+.+ .+++-...+++...+... ...++ ..|..+.
T Consensus 214 i~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~ 293 (399)
T KOG0296|consen 214 IIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIP 293 (399)
T ss_pred EEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcc
Confidence 999999999999888743 3457788888888889888888 778877776633222220 01222 3345556
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 842 FHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 842 ~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|+..-+..++|+-||+|.|||+...++.....|...|+.+.|-+ ..+|++++.||.|++||
T Consensus 294 ~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wD 354 (399)
T KOG0296|consen 294 SSSKLPLAACGSVDGTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWD 354 (399)
T ss_pred cccccchhhcccccceEEEEecccchhheeccCCCceEEEEEcC-cchheeeccCceEEeee
Confidence 66677888999999999999999999999999999999999988 78999999999999997
No 44
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=3.8e-29 Score=248.69 Aligned_cols=274 Identities=18% Similarity=0.265 Sum_probs=244.1
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE--eccCCCCeEEEEECCC-CCEEEEEeCCCcEEEEe
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN--LEEHSSLITDVRFSPS-MPRLATSSFDKTVRVWD 693 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~--l~~h~~~V~~l~fspd-g~~Lasgs~Dg~I~IWD 693 (903)
+.+++|...|.+|+|+.+|..||+|+.|++++||+++..+.... .++|.+.|-.++|+|. ...|++++.|++|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 56788999999999999999999999999999999987655443 5689999999999875 45899999999999999
Q ss_pred CCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe--ecCceeEEEecCCCEEEEEEcCCe
Q 002591 694 ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF--KGGTAQMRFQPHLGRYLAAAAENV 771 (903)
Q Consensus 694 l~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ll~~s~dg~ 771 (903)
++. ++++.......+.|. +.|+|++.+++ +++.|..|.+.|.++.+....+ +..+..++|+-++..|+.....|.
T Consensus 94 ~r~-~k~~~~i~~~~eni~-i~wsp~g~~~~-~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG~ 170 (313)
T KOG1407|consen 94 IRS-GKCTARIETKGENIN-ITWSPDGEYIA-VGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLGC 170 (313)
T ss_pred ecc-CcEEEEeeccCcceE-EEEcCCCCEEE-EecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCce
Confidence 998 667766665555555 88999988655 8899999999999998877654 456778899988888888888899
Q ss_pred EEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEE
Q 002591 772 VSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLL 850 (903)
Q Consensus 772 I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~ 850 (903)
|.|......+++..+..|.....||.|+|+|+|||+|+.| .+.+||+.. ..|++.+..++.+|..+.|+-+|++|+
T Consensus 171 v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E---LiC~R~isRldwpVRTlSFS~dg~~lA 247 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE---LICERCISRLDWPVRTLSFSHDGRMLA 247 (313)
T ss_pred EEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhH---hhhheeeccccCceEEEEeccCcceee
Confidence 9999999999999999999999999999999999999999 999999964 478888888999999999999999999
Q ss_pred EEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 851 VIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 851 t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
+++.|..|-|-++.+|..+....++++...++|+|...+||.+++|
T Consensus 248 SaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 248 SASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred ccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecC
Confidence 9999999999999999999989999999999999999999988865
No 45
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=8.4e-29 Score=265.52 Aligned_cols=290 Identities=17% Similarity=0.216 Sum_probs=235.5
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC----ceeEEec-cCCCCeEEEEECCCCCEEEEEeCC
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL----KSKTNLE-EHSSLITDVRFSPSMPRLATSSFD 686 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~----~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~D 686 (903)
.......+.+|+..|.++++.|.|.+|++|+.|.+|++||+... +..+.+. .....|.++.|++.+..|++.+..
T Consensus 156 P~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~ 235 (641)
T KOG0772|consen 156 PGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGS 235 (641)
T ss_pred CccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecC
Confidence 55666788999999999999999999999999999999998732 2222332 345679999999999999998888
Q ss_pred CcEEEEeCCCCCcee------------EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEee-----
Q 002591 687 KTVRVWDADNPGYSL------------RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVFK----- 748 (903)
Q Consensus 687 g~I~IWDl~~~~~~~------------~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~~----- 748 (903)
..++|+|-+. ...+ ...+||...++|.+|+|.....|+||+.||++||||+...+ .+.+|+
T Consensus 236 aqakl~DRdG-~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~ 314 (641)
T KOG0772|consen 236 AQAKLLDRDG-FEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG 314 (641)
T ss_pred cceeEEccCC-ceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCC
Confidence 8999999864 2222 23358999999999999998888899999999999998754 333443
Q ss_pred ---cCceeEEEecCCCEEEEEEcCCeEEEEECCCCe--E-EEEecCCCC--CeEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 002591 749 ---GGTAQMRFQPHLGRYLAAAAENVVSILDAETQA--C-RLSLQGHTK--PIDSVCWDPSGELLASVSED-SVRVWTVG 819 (903)
Q Consensus 749 ---~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~--~-~~~l~~h~~--~V~sl~~spdg~~lasgs~d-~I~iwdl~ 819 (903)
..+..++|++++..|++++.||.|.+||..... + .+.-.+|.. .|+||.|++||++|++-+.| ++++||++
T Consensus 315 g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLr 394 (641)
T KOG0772|consen 315 GKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLR 394 (641)
T ss_pred CcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecc
Confidence 246779999999999999999999999976542 2 233346777 89999999999999999888 99999999
Q ss_pred CCCCcceEEEeecCCCceEEEEEeCCCCEEEEEEC------CCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEE
Q 002591 820 SGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGC------YQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVAS 892 (903)
Q Consensus 820 s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~------dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaS 892 (903)
..++...+..-......-+.|+|+|+.+.|++|.. .+.+++||..+...+ .+......|..+.|+|.-+.|+.
T Consensus 395 q~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~ 474 (641)
T KOG0772|consen 395 QFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFA 474 (641)
T ss_pred ccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheee
Confidence 87644333333333456788999999999999865 368999999998877 66666888999999999888999
Q ss_pred EecCCcEEEc
Q 002591 893 ASHDKFVKLW 902 (903)
Q Consensus 893 gs~DG~I~IW 902 (903)
|+.||.++||
T Consensus 475 gsgdG~~~vy 484 (641)
T KOG0772|consen 475 GSGDGTAHVY 484 (641)
T ss_pred ecCCCceEEE
Confidence 9999999986
No 46
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.97 E-value=1.8e-28 Score=283.72 Aligned_cols=245 Identities=29% Similarity=0.483 Sum_probs=218.2
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC-CCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~-~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWD 693 (903)
+...+.+|...|++++|+|++++|++++.|++|+|||+ ..+..++++++|...|++++|+|++++|++|+.|++|+|||
T Consensus 195 ~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd 274 (456)
T KOG0266|consen 195 LLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWD 274 (456)
T ss_pred hhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEe
Confidence 34445789999999999999999999999999999999 56699999999999999999999999999999999999999
Q ss_pred CCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe--eeEEeec-----CceeEEEecCCCEEEEE
Q 002591 694 ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS--CTRVFKG-----GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 694 l~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~--~~~~~~~-----~~~~v~~sp~~~~ll~~ 766 (903)
+++ +++++.+.+|...|++++|++++.. |++++.|+.|+|||+.++. +...+.. .+..++|+|++.+++++
T Consensus 275 ~~~-~~~~~~l~~hs~~is~~~f~~d~~~-l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~ 352 (456)
T KOG0266|consen 275 VRT-GECVRKLKGHSDGISGLAFSPDGNL-LVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSA 352 (456)
T ss_pred ccC-CeEEEeeeccCCceEEEEECCCCCE-EEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEe
Confidence 998 8999999999999999999999775 5577889999999999999 5555532 35778999999999999
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCe---EEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecC-CCceEEEE
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPI---DSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCN-GNKFHSCV 841 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V---~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~-~~~i~si~ 841 (903)
..|+.+++||+..++++..+.+|...+ .+..+++.+.++++++.| .|++||+.++ ..+..+..| ...+..+.
T Consensus 353 ~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~---~~~~~l~~h~~~~~~~~~ 429 (456)
T KOG0266|consen 353 SLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSG---GILQRLEGHSKAAVSDLS 429 (456)
T ss_pred cCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCcc---chhhhhcCCCCCceeccc
Confidence 999999999999999999999988753 344557789999999999 9999999875 566677777 78899999
Q ss_pred EeCCCCEEEEEE--CCCeEEEEECC
Q 002591 842 FHPTYPSLLVIG--CYQSLELWNMS 864 (903)
Q Consensus 842 ~sp~g~~l~t~s--~dg~I~vwdl~ 864 (903)
+++...++++++ .|+.|++|...
T Consensus 430 ~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 430 SHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cCCCcCeeeecCcCCCceEEEecCC
Confidence 999999999998 68899999764
No 47
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.97 E-value=8.9e-30 Score=267.28 Aligned_cols=286 Identities=21% Similarity=0.295 Sum_probs=244.8
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--eeEEeccCCCCeEEEEECCCCCEEEEEeCCCcE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK--SKTNLEEHSSLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~--~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
+-.....+..|.+.|..+.|-++...|++|+.|..|++|++...+ .+.++.+..+.|+++.|.++++++++++.|+.+
T Consensus 164 pS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~ 243 (459)
T KOG0288|consen 164 PSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNL 243 (459)
T ss_pred chhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCce
Confidence 334556788899999999999998999999999999999987555 778888999999999999999999999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcC
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~d 769 (903)
++|+++. .....++.+|.+.|+++.|...... +++|+.|.+|++||+....|.+++.....+..+......++++..|
T Consensus 244 r~Wnvd~-~r~~~TLsGHtdkVt~ak~~~~~~~-vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~D 321 (459)
T KOG0288|consen 244 RLWNVDS-LRLRHTLSGHTDKVTAAKFKLSHSR-VVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFD 321 (459)
T ss_pred eeeeccc-hhhhhhhcccccceeeehhhccccc-eeeccccchhhhhhhhhhheeccccccccccceEecceeeeecccc
Confidence 9999997 7788999999999999999877554 6699999999999999999998776544444433335677888889
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeec----CCCceEEEEEeC
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSC----NGNKFHSCVFHP 844 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~----~~~~i~si~~sp 844 (903)
++|++||+++..++.....+. .|+++..++++..|.+++.| ++.++|+++... ...+.. .....+.++|+|
T Consensus 322 kkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI---~~~~sA~g~k~asDwtrvvfSp 397 (459)
T KOG0288|consen 322 KKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEI---RQTFSAEGFKCASDWTRVVFSP 397 (459)
T ss_pred cceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccE---EEEeeccccccccccceeEECC
Confidence 999999999999999988765 99999999999988888888 999999998633 222221 133478899999
Q ss_pred CCCEEEEEECCCeEEEEECCCCcEE-EEcc-CCC-CEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 845 TYPSLLVIGCYQSLELWNMSENKTM-TLTA-HEG-LIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 845 ~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~-h~~-~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
++.|+++|+.||.|+||++.++++. .+.. +.. .|++++|+|.|.++++++.++.+.+|.
T Consensus 398 d~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 398 DGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred CCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 9999999999999999999999987 3333 333 699999999999999999999999995
No 48
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=3.2e-29 Score=258.28 Aligned_cols=243 Identities=22% Similarity=0.441 Sum_probs=223.4
Q ss_pred CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcE
Q 002591 654 TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 733 (903)
Q Consensus 654 t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I 733 (903)
..+..+.+.+|.+.|.||++.|.+.+|++|+.|++|+|||+.+ +....++.||-..|..+++++...++| +|+.|+.|
T Consensus 140 pwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlat-g~LkltltGhi~~vr~vavS~rHpYlF-s~gedk~V 217 (460)
T KOG0285|consen 140 PWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLAT-GQLKLTLTGHIETVRGVAVSKRHPYLF-SAGEDKQV 217 (460)
T ss_pred cceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEccc-CeEEEeecchhheeeeeeecccCceEE-EecCCCee
Confidence 3466778889999999999999999999999999999999998 888899999999999999999988666 99999999
Q ss_pred EEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC
Q 002591 734 RYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE 810 (903)
Q Consensus 734 ~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~ 810 (903)
+.||++..+.++.+.++ +.++..+|....+++++.|.+++|||+++...+..+.+|..+|.++.+.|...-+++|+.
T Consensus 218 KCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~ 297 (460)
T KOG0285|consen 218 KCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSH 297 (460)
T ss_pred EEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecC
Confidence 99999999999988775 677888999999999999999999999999999999999999999999998889999999
Q ss_pred C-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCC
Q 002591 811 D-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETG 888 (903)
Q Consensus 811 d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~ 888 (903)
| +|++||++.+ +....+..|...+.+++.+|....|++++.| .|+-|++..+..+ .+.+|...|++++...|+
T Consensus 298 D~tvrlWDl~ag---kt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~- 372 (460)
T KOG0285|consen 298 DSTVRLWDLRAG---KTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG- 372 (460)
T ss_pred CceEEEeeeccC---ceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-
Confidence 9 9999999988 6777888889999999999998878877766 6999999999887 788999999999998776
Q ss_pred EEEEEecCCcEEEcC
Q 002591 889 YVASASHDKFVKLWK 903 (903)
Q Consensus 889 ~LaSgs~DG~I~IWd 903 (903)
++++|++.|.|.+||
T Consensus 373 v~~~G~dng~~~fwd 387 (460)
T KOG0285|consen 373 VLVSGGDNGSIMFWD 387 (460)
T ss_pred eEEEcCCceEEEEEe
Confidence 788999999999997
No 49
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=7.8e-30 Score=261.37 Aligned_cols=277 Identities=20% Similarity=0.387 Sum_probs=229.9
Q ss_pred CCCceEEeeecCCCCCcCCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe
Q 002591 582 LDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL 661 (903)
Q Consensus 582 ~d~~v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l 661 (903)
..+.|-+.-.+|+........+.+.+++.-+..++..+.||++.|.|+.|.. +.|++|+.|.+|+|||+.+++++.++
T Consensus 196 ~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~l~tl 273 (499)
T KOG0281|consen 196 NSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEPLNTL 273 (499)
T ss_pred cCCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCCchhhHH
Confidence 3344555555555443333334444444446778889999999999999864 49999999999999999999999999
Q ss_pred ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC
Q 002591 662 EEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG--YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 739 (903)
Q Consensus 662 ~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~--~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~ 739 (903)
.+|...|..+.|+.. ++++++.|.+|++||+..+. .+.+.+.||...|..+.|... +|++++.|.+|++|++.
T Consensus 274 ihHceaVLhlrf~ng--~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k---yIVsASgDRTikvW~~s 348 (499)
T KOG0281|consen 274 IHHCEAVLHLRFSNG--YMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGDRTIKVWSTS 348 (499)
T ss_pred hhhcceeEEEEEeCC--EEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc---eEEEecCCceEEEEecc
Confidence 999999999999854 99999999999999998754 345678899999999999733 77899999999999999
Q ss_pred CCeeeEEeecCceeEEEecC-CCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEE
Q 002591 740 NGSCTRVFKGGTAQMRFQPH-LGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWT 817 (903)
Q Consensus 740 t~~~~~~~~~~~~~v~~sp~-~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwd 817 (903)
++++++++.++...++..-. +..+++|++|++|++||+..|.++..+++|+.-|.||.|+ .+.|++|+.| +|+|||
T Consensus 349 t~efvRtl~gHkRGIAClQYr~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGkikvWd 426 (499)
T KOG0281|consen 349 TCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWD 426 (499)
T ss_pred ceeeehhhhcccccceehhccCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--CceeeeccccceEEEEe
Confidence 99999999998877776554 4556667889999999999999999999999999999997 6789999999 999999
Q ss_pred CCCCCCc------ceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 818 VGSGSEG------ECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 818 l~s~~~~------~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
+..+... .|+..+..|.+.|..+.|. ...|++++.|.+|.|||+..+...
T Consensus 427 l~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD--~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 427 LQAALDPRAPASTLCLRTLVEHSGRVFRLQFD--EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred cccccCCcccccchHHHhhhhccceeEEEeec--ceEEEeccCCCeEEEEEcCCCCcc
Confidence 9876443 3666777788899999984 557999999999999999876544
No 50
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.9e-27 Score=243.65 Aligned_cols=287 Identities=21% Similarity=0.310 Sum_probs=239.9
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC--CCcE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF--DKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~--Dg~I 689 (903)
.++..+.++.-.+.|+++.|+.+|.+|++++.|.+|+|||..+++.++++..+...|..++|......++.++. |.+|
T Consensus 3 s~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 3 SFRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred ccccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCce
Confidence 45666777778899999999999999999999999999999999999999999999999999888777777776 8999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec-CceeEEEecCCCEEEEEEc
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG-GTAQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-~~~~v~~sp~~~~ll~~s~ 768 (903)
|..++.+ .+.++.|.||...|.+|+.+|-++. +++++.|++|++||++..+|...+.. +...++|.|.|-.++++..
T Consensus 83 ryLsl~d-NkylRYF~GH~~~V~sL~~sP~~d~-FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 83 RYLSLHD-NKYLRYFPGHKKRVNSLSVSPKDDT-FLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANG 160 (311)
T ss_pred EEEEeec-CceEEEcCCCCceEEEEEecCCCCe-EEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecC
Confidence 9999998 7889999999999999999999764 55999999999999999998887764 4556789999888888888
Q ss_pred CCeEEEEECCCC--eEEEEec---CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEE
Q 002591 769 ENVVSILDAETQ--ACRLSLQ---GHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVF 842 (903)
Q Consensus 769 dg~I~i~D~~t~--~~~~~l~---~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~ 842 (903)
.+.|++||++.. .+..++. +.....+.|.|+|||++|+.++.. .+++.|.-+|.....+.........-..++|
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~f 240 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATF 240 (311)
T ss_pred CCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEE
Confidence 889999999975 2333332 346778999999999988877777 8999999888533333332222333367889
Q ss_pred eCCCCEEEEEECCCeEEEEECCCCcEE-EEcc-CCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 843 HPTYPSLLVIGCYQSLELWNMSENKTM-TLTA-HEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 843 sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~-h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
.|++.++++|+.||+|.+|++++++.+ .+.+ +.+++.++.|+|.-.++++++ ..+.+|
T Consensus 241 tPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw 300 (311)
T KOG1446|consen 241 TPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFW 300 (311)
T ss_pred CCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--ceEEEE
Confidence 999999999999999999999999988 5555 789999999999877777664 457776
No 51
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=1.2e-28 Score=249.65 Aligned_cols=284 Identities=22% Similarity=0.392 Sum_probs=238.8
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC------------------CceeEEeccCCCCeEEEEECCC
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT------------------LKSKTNLEEHSSLITDVRFSPS 676 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t------------------~~~~~~l~~h~~~V~~l~fspd 676 (903)
+...+..|..++.|.+|++||.++|||+.|..|+|+|++. ...++++..|.+.|+++.|+|.
T Consensus 104 Et~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr 183 (430)
T KOG0640|consen 104 ETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR 183 (430)
T ss_pred ceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch
Confidence 4456778999999999999999999999999999999861 1356778899999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCC--ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe------e
Q 002591 677 MPRLATSSFDKTVRVWDADNPG--YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF------K 748 (903)
Q Consensus 677 g~~Lasgs~Dg~I~IWDl~~~~--~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~------~ 748 (903)
...|++|+.|++|++||+.... +..+.| ....+|.+|.|+|.|++++ .|..-.++++||+++..|...- .
T Consensus 184 e~ILiS~srD~tvKlFDfsK~saKrA~K~~-qd~~~vrsiSfHPsGefll-vgTdHp~~rlYdv~T~QcfvsanPd~qht 261 (430)
T KOG0640|consen 184 ETILISGSRDNTVKLFDFSKTSAKRAFKVF-QDTEPVRSISFHPSGEFLL-VGTDHPTLRLYDVNTYQCFVSANPDDQHT 261 (430)
T ss_pred hheEEeccCCCeEEEEecccHHHHHHHHHh-hccceeeeEeecCCCceEE-EecCCCceeEEeccceeEeeecCcccccc
Confidence 9999999999999999997532 112233 3567899999999988655 8888899999999999876543 4
Q ss_pred cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecC-CC-CCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcc
Q 002591 749 GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQG-HT-KPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGE 825 (903)
Q Consensus 749 ~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~-h~-~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~ 825 (903)
+.+.++.+++.++.+++++.||.|+|||--+++|+.++.. |. ..|.+..|..+++||++.+.| .|++|.+.++ .
T Consensus 262 ~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~---R 338 (430)
T KOG0640|consen 262 GAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG---R 338 (430)
T ss_pred cceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC---c
Confidence 5688999999999999999999999999999999998864 54 469999999999999999999 9999999988 6
Q ss_pred eEEEeecCCC-----ceEEEEEeCCCCEEEEEECC-CeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecCC
Q 002591 826 CVHELSCNGN-----KFHSCVFHPTYPSLLVIGCY-QSLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHDK 897 (903)
Q Consensus 826 ~i~~~~~~~~-----~i~si~~sp~g~~l~t~s~d-g~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG 897 (903)
++.++.+.+. --+...|+....+++.-... +.++-||.++...+ .-.+|.+.|..+.-+|.+.-|++|++|-
T Consensus 339 ~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~ 418 (430)
T KOG0640|consen 339 MLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDF 418 (430)
T ss_pred eEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccc
Confidence 6666655321 12345677777777766553 68999999998876 4458999999999999999999999999
Q ss_pred cEEEcC
Q 002591 898 FVKLWK 903 (903)
Q Consensus 898 ~I~IWd 903 (903)
.+|+|.
T Consensus 419 raRFWy 424 (430)
T KOG0640|consen 419 RARFWY 424 (430)
T ss_pred eeeeee
Confidence 999994
No 52
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=2.4e-29 Score=259.99 Aligned_cols=281 Identities=18% Similarity=0.340 Sum_probs=236.5
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDG-KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 690 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg-~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~ 690 (903)
.-..+..+.+|.+.|.|++=+|.. ..+|+|+.||.|+|||+....+..++..|.+.|..|++.. ..+++++.|++|+
T Consensus 55 akPFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK 132 (433)
T KOG0268|consen 55 AKPFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVK 132 (433)
T ss_pred hccchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCccee
Confidence 344567789999999999999987 6899999999999999999999999999999999999987 6899999999999
Q ss_pred EEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEE
Q 002591 691 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAA 767 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s 767 (903)
.|.++. ..++++.+ ...+..|.-+.. ...++||+. .|.|||......+..+.- .+.++.|+|....+++++
T Consensus 133 ~wk~~~--~p~~tilg-~s~~~gIdh~~~-~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~ 206 (433)
T KOG0268|consen 133 QWKIDG--PPLHTILG-KSVYLGIDHHRK-NSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASC 206 (433)
T ss_pred eeeccC--Ccceeeec-cccccccccccc-cccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeee
Confidence 999985 46677764 345667776654 346778874 599999988888877763 457788999886666555
Q ss_pred -cCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 768 -AENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 768 -~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
+|+.|.+||+++..++..+. -.-.-+.|||+|.+..|+++++| .++.||++... ..+....+|...|.++.|+|.
T Consensus 207 ~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~--~p~~v~~dhvsAV~dVdfspt 283 (433)
T KOG0268|consen 207 ASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLS--RPLNVHKDHVSAVMDVDFSPT 283 (433)
T ss_pred ccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhc--ccchhhcccceeEEEeccCCC
Confidence 89999999999998877654 23445789999988889999999 99999998764 566777889999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCcEEEE--ccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 846 YPSLLVIGCYQSLELWNMSENKTMTL--TAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 846 g~~l~t~s~dg~I~vwdl~~~~~~~~--~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|..|++|+.|.+|+||.++.+....+ ...-..|.|+.|+-|.+||++||+|+.|++|+
T Consensus 284 G~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 284 GQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred cchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeee
Confidence 99999999999999999998876522 23345799999999999999999999999996
No 53
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=8.2e-28 Score=262.87 Aligned_cols=246 Identities=23% Similarity=0.359 Sum_probs=223.2
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
+-..++.|+-..-+|+++.|-...+++++|+.|..|+||+..+++.++.|+.|.+.|.||+.+|...+++++|.|-+|++
T Consensus 44 tqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKl 123 (794)
T KOG0276|consen 44 TQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKL 123 (794)
T ss_pred cceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEE
Confidence 66788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCC--CEEEEE
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHL--GRYLAA 766 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~--~~ll~~ 766 (903)
||.+..-.+..+|.||+..|.+++|.|.....+++|+-|++|++|.+....+..++++ +++++++-+.+ .++++|
T Consensus 124 W~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsg 203 (794)
T KOG0276|consen 124 WDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISG 203 (794)
T ss_pred eeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEec
Confidence 9999977889999999999999999999999999999999999999999988888876 57888887765 589999
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
+.|.+|+|||..+..|+.++++|...|..++|+|.-.+|++|++| +++||+..+. +....+.-....+.+++..+.
T Consensus 204 aDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty---~lE~tLn~gleRvW~I~~~k~ 280 (794)
T KOG0276|consen 204 ADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY---KLEKTLNYGLERVWCIAAHKG 280 (794)
T ss_pred CCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce---ehhhhhhcCCceEEEEeecCC
Confidence 999999999999999999999999999999999999999999999 9999998775 334444445677889998888
Q ss_pred CCEEEEEECCCeEEE
Q 002591 846 YPSLLVIGCYQSLEL 860 (903)
Q Consensus 846 g~~l~t~s~dg~I~v 860 (903)
++.+++|..+|.|.|
T Consensus 281 ~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 281 DGKIAVGFDEGSVTV 295 (794)
T ss_pred CCeEEEeccCCcEEE
Confidence 888887777665443
No 54
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=9e-27 Score=248.83 Aligned_cols=242 Identities=33% Similarity=0.609 Sum_probs=215.7
Q ss_pred eeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 002591 616 ANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 695 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~ 695 (903)
...+..|...|.++.|++++++|++++.||.|++||+.+++.+..+..|...|.++.|++++.++++++.|+.|++||+.
T Consensus 44 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~ 123 (289)
T cd00200 44 LRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE 123 (289)
T ss_pred EEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECC
Confidence 34456788899999999999999999999999999999888899999999999999999998899988889999999998
Q ss_pred CCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEEcCCeE
Q 002591 696 NPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAAAENVV 772 (903)
Q Consensus 696 ~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s~dg~I 772 (903)
+ ......+..|...|.+++|+|++. ++++++.|+.|++||+++++.+..+.. .+..+.|++++..+++++.++.|
T Consensus 124 ~-~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 201 (289)
T cd00200 124 T-GKCLTTLRGHTDWVNSVAFSPDGT-FVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTI 201 (289)
T ss_pred C-cEEEEEeccCCCcEEEEEEcCcCC-EEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcE
Confidence 6 667778888999999999999854 666777799999999998887776653 56789999999999999999999
Q ss_pred EEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEE
Q 002591 773 SILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLV 851 (903)
Q Consensus 773 ~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t 851 (903)
++||+++++.+..+..|...|.+++|++++.++++++.+ .|++||+.++ ..+..+..+...+.+++|++++.+|++
T Consensus 202 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~~ 278 (289)
T cd00200 202 KLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG---ECVQTLSGHTNSVTSLAWSPDGKRLAS 278 (289)
T ss_pred EEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc---eeEEEccccCCcEEEEEECCCCCEEEE
Confidence 999999999999888899999999999998899988856 9999999875 556666678889999999999999999
Q ss_pred EECCCeEEEEE
Q 002591 852 IGCYQSLELWN 862 (903)
Q Consensus 852 ~s~dg~I~vwd 862 (903)
++.|+.|++|+
T Consensus 279 ~~~d~~i~iw~ 289 (289)
T cd00200 279 GSADGTIRIWD 289 (289)
T ss_pred ecCCCeEEecC
Confidence 99999999996
No 55
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.96 E-value=1.1e-27 Score=249.34 Aligned_cols=276 Identities=21% Similarity=0.363 Sum_probs=232.9
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCC---CEEEEEeCCCcEEEEeCCCC
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM---PRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg---~~Lasgs~Dg~I~IWDl~~~ 697 (903)
.|.+-|.+|... +++|++|++||.++|||. .|+..+.+.+|.++|.+++|.-.. ..|++++.|.++++|.++.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 488889988887 679999999999999996 589999999999999998885433 36999999999999998864
Q ss_pred Cc---eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC-------------------------eeeEEeec
Q 002591 698 GY---SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG-------------------------SCTRVFKG 749 (903)
Q Consensus 698 ~~---~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~-------------------------~~~~~~~~ 749 (903)
.. .+....||...|-++...+++.. +++|+.|.+|+||+..+. ..+..+.+
T Consensus 180 ~~~~~~~~~~~GHk~~V~sVsv~~sgtr-~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G 258 (423)
T KOG0313|consen 180 ENKVKALKVCRGHKRSVDSVSVDSSGTR-FCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG 258 (423)
T ss_pred hhhhhHHhHhcccccceeEEEecCCCCe-EEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc
Confidence 32 23344599999999999999774 569999999999994321 11122233
Q ss_pred ---CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcc
Q 002591 750 ---GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGE 825 (903)
Q Consensus 750 ---~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~ 825 (903)
.+..+.|.+ ...+++++.|.+|+.||+.++.++.++. ....++|+.++|..++|++|+.| .|++||.+++....
T Consensus 259 Ht~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~ 336 (423)
T KOG0313|consen 259 HTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLT-TNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSV 336 (423)
T ss_pred cccceeeEEEcC-CCceEeecccceEEEEEeecccceeeee-cCcceeEeecccccceeeecCCCCceeecCCCCCCCce
Confidence 355677877 7889999999999999999999988877 45789999999999999999999 99999999987777
Q ss_pred eEEEeecCCCceEEEEEeCCCCE-EEEEECCCeEEEEECCCCc-EE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 826 CVHELSCNGNKFHSCVFHPTYPS-LLVIGCYQSLELWNMSENK-TM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 826 ~i~~~~~~~~~i~si~~sp~g~~-l~t~s~dg~I~vwdl~~~~-~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
....+.+|.+.|.++.|+|...+ |++++.|+++++||+++.+ .+ .+.+|.+.|.++.|. ++.+|++|+.|+.|+|+
T Consensus 337 v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~ 415 (423)
T KOG0313|consen 337 VSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIF 415 (423)
T ss_pred eEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEe
Confidence 78899999999999999997654 6778899999999999877 44 888999999999995 57799999999999998
Q ss_pred C
Q 002591 903 K 903 (903)
Q Consensus 903 d 903 (903)
+
T Consensus 416 ~ 416 (423)
T KOG0313|consen 416 K 416 (423)
T ss_pred c
Confidence 5
No 56
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=5.3e-28 Score=239.62 Aligned_cols=276 Identities=21% Similarity=0.376 Sum_probs=230.7
Q ss_pred eEEEEEcCC-CCEEEEEe-------CCCcEEEEECCCCceeEEec--cCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeC
Q 002591 626 VICCHFSSD-GKLLATGG-------HDKKAVLWHTDTLKSKTNLE--EHSSLITDVRFSPSM-PRLATSSFDKTVRVWDA 694 (903)
Q Consensus 626 V~~l~fspd-g~~Latgs-------~Dg~V~vWd~~t~~~~~~l~--~h~~~V~~l~fspdg-~~Lasgs~Dg~I~IWDl 694 (903)
=+++.|||- ..+||++. ..|++.|.++...+-+..+. .-.+.+.+|+|+++. ..+++++.||+++|||+
T Consensus 11 GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~ 90 (311)
T KOG0277|consen 11 GYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDL 90 (311)
T ss_pred cceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEecc
Confidence 367889982 23444432 36889999987554444443 346789999999875 47888899999999999
Q ss_pred CCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCcee---EEEecCC-CEEEEEEcCC
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQ---MRFQPHL-GRYLAAAAEN 770 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~---v~~sp~~-~~ll~~s~dg 770 (903)
..+..++..++.|...|.++.|++..++.+++++.|++|++|+......+.+|.++..+ ..|+|.. +.++.++.|+
T Consensus 91 ~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~ 170 (311)
T KOG0277|consen 91 TMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDG 170 (311)
T ss_pred CCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCc
Confidence 88888999999999999999999988888889999999999999999999999987544 5688876 5677788899
Q ss_pred eEEEEECCCCeEEEEecCCCCCeEEEEEcC-CCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC-C
Q 002591 771 VVSILDAETQACRLSLQGHTKPIDSVCWDP-SGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY-P 847 (903)
Q Consensus 771 ~I~i~D~~t~~~~~~l~~h~~~V~sl~~sp-dg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g-~ 847 (903)
.+++||++..-....+..|...|.|+.|+. +.++|+|++.| .|++||+++-. ..+.++.+|+-.|..+.|+|.. .
T Consensus 171 ~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r--~pl~eL~gh~~AVRkvk~Sph~~~ 248 (311)
T KOG0277|consen 171 TLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR--TPLFELNGHGLAVRKVKFSPHHAS 248 (311)
T ss_pred eEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc--ccceeecCCceEEEEEecCcchhh
Confidence 999999998755555899999999999998 45589999999 99999999764 5688889999999999999965 5
Q ss_pred EEEEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEec-CCCEEEEEecCCcEEEcC
Q 002591 848 SLLVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVST-ETGYVASASHDKFVKLWK 903 (903)
Q Consensus 848 ~l~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~sp-dg~~LaSgs~DG~I~IWd 903 (903)
.|++++.|-+++|||....... +..-|..-|..+.|++ +..++|+++.|+.++||+
T Consensus 249 lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 249 LLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred HhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeec
Confidence 6778888999999999865544 6677899999999987 667999999999999996
No 57
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=7.7e-29 Score=251.74 Aligned_cols=276 Identities=24% Similarity=0.414 Sum_probs=239.4
Q ss_pred eEEEEeCCCceeccC---CCeeeeCCcchhhhhhccccccCCCCCceEEeeecCCCCCcCCCCcccccccCcceeeeeEe
Q 002591 543 LMMFGTDGAGTLTSP---SNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSV 619 (903)
Q Consensus 543 ~i~~s~dg~~~~~~~---~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~l 619 (903)
+-.|+|||.|+++++ -+++||.-+|++++++..-.. ..|
T Consensus 218 cA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAq--------------------------------------d~f 259 (508)
T KOG0275|consen 218 CARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQ--------------------------------------DNF 259 (508)
T ss_pred heeeCCCCceEeeccccceeeeehhccchhhhhhhhhhh--------------------------------------cce
Confidence 557899999998854 448899999998887543211 124
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 620 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
.-|.++|.|++|+.|..+||+|+.||+|+||.+.+|.+++.|. .|+..|+|+.|+.|+..+++++.|.+|||.-+.+ +
T Consensus 260 MMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKS-G 338 (508)
T KOG0275|consen 260 MMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKS-G 338 (508)
T ss_pred eecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEecccc-c
Confidence 4578899999999999999999999999999999999999997 8999999999999999999999999999999998 8
Q ss_pred ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec-----CceeEEEecCC-CEEEEEEcCCeE
Q 002591 699 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG-----GTAQMRFQPHL-GRYLAAAAENVV 772 (903)
Q Consensus 699 ~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-----~~~~v~~sp~~-~~ll~~s~dg~I 772 (903)
++++.|.+|+..|+...|.++|.+++ +++.||+|++|+.++.+|+.+|+. .+..+...|.+ ..++++...++|
T Consensus 339 K~LKEfrGHsSyvn~a~ft~dG~~ii-saSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv 417 (508)
T KOG0275|consen 339 KCLKEFRGHSSYVNEATFTDDGHHII-SASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTV 417 (508)
T ss_pred hhHHHhcCccccccceEEcCCCCeEE-EecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeE
Confidence 99999999999999999999988766 999999999999999999999875 34556666665 678888889999
Q ss_pred EEEECCCCeEEEEecC---CCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCE
Q 002591 773 SILDAETQACRLSLQG---HTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 773 ~i~D~~t~~~~~~l~~---h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~ 848 (903)
+|.++. |..++.+.. ..+...+++.+|.|.++++.++| .++.|.+.++ ..-..+..|+..+..++-+|..+.
T Consensus 418 ~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG---~LE~tl~VhEkdvIGl~HHPHqNl 493 (508)
T KOG0275|consen 418 YIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSG---KLERTLPVHEKDVIGLTHHPHQNL 493 (508)
T ss_pred EEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecC---ceeeeeecccccccccccCcccch
Confidence 999875 566666653 34567788899999999999999 8999999887 666778888999999999999999
Q ss_pred EEEEECCCeEEEEE
Q 002591 849 LLVIGCYQSLELWN 862 (903)
Q Consensus 849 l~t~s~dg~I~vwd 862 (903)
|++-+.||.+++|.
T Consensus 494 lAsYsEDgllKLWk 507 (508)
T KOG0275|consen 494 LASYSEDGLLKLWK 507 (508)
T ss_pred hhhhcccchhhhcC
Confidence 99999999999995
No 58
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=6e-29 Score=265.99 Aligned_cols=246 Identities=18% Similarity=0.313 Sum_probs=218.5
Q ss_pred CceeEEeccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcE
Q 002591 655 LKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEI 733 (903)
Q Consensus 655 ~~~~~~l~~h~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I 733 (903)
.+.+.++.+|+..|+++.|.| .+.+|++++.|+.|+||++...+.++++|.+|..+|.+++|+.++..+| +++.|+.|
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fL-S~sfD~~l 282 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFL-SASFDRFL 282 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeee-eeecceee
Confidence 466788999999999999999 7889999999999999999988999999999999999999999998777 99999999
Q ss_pred EEEEcCCCeeeEEeec--CceeEEEecCC-CEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC
Q 002591 734 RYWSINNGSCTRVFKG--GTAQMRFQPHL-GRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE 810 (903)
Q Consensus 734 ~iwDi~t~~~~~~~~~--~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~ 810 (903)
++||+++|+++..|.. ...++.|.|++ +.|++|+.|+.|+.||+++++.+.++..|-+.|..|.|-++|+++++.++
T Consensus 283 KlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSD 362 (503)
T KOG0282|consen 283 KLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSD 362 (503)
T ss_pred eeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeecc
Confidence 9999999999998875 46789999999 88999999999999999999999999999999999999999999999999
Q ss_pred C-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE----EEccCC--CCEEEEEE
Q 002591 811 D-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM----TLTAHE--GLIAALAV 883 (903)
Q Consensus 811 d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~----~~~~h~--~~V~sl~~ 883 (903)
| +++||+.+.....+.+... +.....+|..+|+++++++=+.|+.|.+|.+...-.+ .+.+|. +.-..+.|
T Consensus 363 dks~riWe~~~~v~ik~i~~~--~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~f 440 (503)
T KOG0282|consen 363 DKSVRIWENRIPVPIKNIADP--EMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDF 440 (503)
T ss_pred CccEEEEEcCCCccchhhcch--hhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEE
Confidence 9 9999999877444433332 2445678899999999999999999999987654333 566664 56677899
Q ss_pred ecCCCEEEEEecCCcEEEcC
Q 002591 884 STETGYVASASHDKFVKLWK 903 (903)
Q Consensus 884 spdg~~LaSgs~DG~I~IWd 903 (903)
+|||++|++|+.||.+.+||
T Consensus 441 SpDG~~l~SGdsdG~v~~wd 460 (503)
T KOG0282|consen 441 SPDGRTLCSGDSDGKVNFWD 460 (503)
T ss_pred cCCCCeEEeecCCccEEEee
Confidence 99999999999999999997
No 59
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.96 E-value=5.6e-27 Score=237.66 Aligned_cols=240 Identities=23% Similarity=0.373 Sum_probs=210.9
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCC
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP-RLATSSFDKTVRVWDAD 695 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I~IWDl~ 695 (903)
..+++|.++|..+.|..|+..|++++.|++|+.||+++++.++.+++|...|+.+.-+.-|. .+.+++.|++++|||++
T Consensus 84 ~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R 163 (338)
T KOG0265|consen 84 WVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIR 163 (338)
T ss_pred eeeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeec
Confidence 44669999999999999999999999999999999999999999999999999998554454 56777889999999999
Q ss_pred CCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeE
Q 002591 696 NPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVV 772 (903)
Q Consensus 696 ~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I 772 (903)
. +.+++++. ....++++.|...+..++ +|+-|+.|++||++...++.++.++ +..+..++++.++++-+.|.++
T Consensus 164 ~-k~~~~t~~-~kyqltAv~f~d~s~qv~-sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tv 240 (338)
T KOG0265|consen 164 K-KEAIKTFE-NKYQLTAVGFKDTSDQVI-SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTV 240 (338)
T ss_pred c-cchhhccc-cceeEEEEEeccccccee-eccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceE
Confidence 7 55666664 456799999998888776 9999999999999999999988775 6778899999999999999999
Q ss_pred EEEECCCC----eEEEEecCCCC----CeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEe
Q 002591 773 SILDAETQ----ACRLSLQGHTK----PIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFH 843 (903)
Q Consensus 773 ~i~D~~t~----~~~~~l~~h~~----~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s 843 (903)
++||++-. .++..+.+|.. ....++|+|++..+.+++.| .+++||.... .++..+.+|.+.|.++.|+
T Consensus 241 rvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r---~~lyklpGh~gsvn~~~Fh 317 (338)
T KOG0265|consen 241 RVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSR---RILYKLPGHYGSVNEVDFH 317 (338)
T ss_pred EEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccc---cEEEEcCCcceeEEEeeec
Confidence 99999864 56777776543 34567999999999999999 9999999765 7899999999999999999
Q ss_pred CCCCEEEEEECCCeEEEEE
Q 002591 844 PTYPSLLVIGCYQSLELWN 862 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vwd 862 (903)
|....|++++.|++|++=.
T Consensus 318 p~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 318 PTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred CCCcEEEEeccCceeEeec
Confidence 9999999999999998744
No 60
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=7.3e-27 Score=233.80 Aligned_cols=266 Identities=22% Similarity=0.381 Sum_probs=216.0
Q ss_pred ccccCCCCCceEEeeecCCCCCcCCCCcccccccCcceeeeeEe-ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-
Q 002591 576 LVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSV-RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD- 653 (903)
Q Consensus 576 ~~~~gs~d~~v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~l-~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~- 653 (903)
+++.++.|+.++.|.. ..+-++.++..+ .+|+..|++|+|+|.|++||+|+.|.++.||.-.
T Consensus 29 ilAscg~Dk~vriw~~----------------~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~ 92 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWST----------------SSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKED 92 (312)
T ss_pred EEEeecCCceEEEEec----------------CCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCC
Confidence 4555556666666643 222256676666 4799999999999999999999999999999855
Q ss_pred -CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC--CCceeEEeccCCCceEEEEecCCCCeEEEEEeCC
Q 002591 654 -TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN--PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD 730 (903)
Q Consensus 654 -t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~--~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D 730 (903)
+.+++.++++|...|.|++|+++|.+||+++.|+.|-||.+.. .-.++..+..|+..|..+.|||... +|++|+.|
T Consensus 93 ~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~d-lL~S~SYD 171 (312)
T KOG0645|consen 93 GEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTED-LLFSCSYD 171 (312)
T ss_pred CceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcc-eeEEeccC
Confidence 5688999999999999999999999999999999999999984 3467789999999999999999754 77899999
Q ss_pred CcEEEEEcCC---CeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCE
Q 002591 731 GEIRYWSINN---GSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGEL 804 (903)
Q Consensus 731 g~I~iwDi~t---~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~ 804 (903)
.+|++|+-.. -.|+.++.++ +-++.|++.|.++++++.|++|+||-..+.-. ..|...+..+.|. ...
T Consensus 172 nTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~~----~~~sr~~Y~v~W~--~~~ 245 (312)
T KOG0645|consen 172 NTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDLS----GMHSRALYDVPWD--NGV 245 (312)
T ss_pred CeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCcc----hhcccceEeeeec--ccc
Confidence 9999998772 3477777765 45688999999999999999999998663221 2278899999999 457
Q ss_pred EEEEeCC-eEEEEECCCCCC---cc-eEEEeecCCCceEEEEEeCC-CCEEEEEECCCeEEEEECC
Q 002591 805 LASVSED-SVRVWTVGSGSE---GE-CVHELSCNGNKFHSCVFHPT-YPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 805 lasgs~d-~I~iwdl~s~~~---~~-~i~~~~~~~~~i~si~~sp~-g~~l~t~s~dg~I~vwdl~ 864 (903)
|++++.| .|++|.-..... .. ..+....|+..|+++.|.|. .+.|++++.||.|++|.+.
T Consensus 246 IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 246 IASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 8888877 999998765311 11 12244567889999999995 6789999999999999874
No 61
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3.6e-27 Score=252.97 Aligned_cols=274 Identities=19% Similarity=0.306 Sum_probs=239.1
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 623 TSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 623 ~~~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
.+.|.+++|+|... -+|+++ .-.|.||+..+....+++......|.+++|..||++|++|...|.|+|||+.+ ...+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~-r~iL 103 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS-RVIL 103 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc-HHHH
Confidence 45799999999554 344443 35799999999888888988999999999999999999999999999999665 6788
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCC-EEEEEEcCCeEEEEEC
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLG-RYLAAAAENVVSILDA 777 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~-~ll~~s~dg~I~i~D~ 777 (903)
+.+.+|..+|..+.|+|.++.++++|++|+.+++||+.+......+.++ +.+..|+|-.+ .+++|+.||.|++||+
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~Dt 183 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDT 183 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEe
Confidence 9999999999999999999999999999999999999998865455544 56677888766 5777888999999999
Q ss_pred CCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC
Q 002591 778 ETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ 856 (903)
Q Consensus 778 ~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg 856 (903)
+.. ..+.++. |..+|.++++-|.|.+|++++...|+|||+.++. ..+.....|...|+|+++..++..|++++-|+
T Consensus 184 R~~~~~v~eln-hg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~--qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~ 260 (487)
T KOG0310|consen 184 RSLTSRVVELN-HGCPVESVLALPSGSLIASAGGNSVKVWDLTTGG--QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR 260 (487)
T ss_pred ccCCceeEEec-CCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCc--eehhhhhcccceEEEEEeecCCceEeeccccc
Confidence 988 5666655 9999999999999999999999999999998763 44555556889999999999999999999999
Q ss_pred eEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 857 SLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 857 ~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
.|++||+.+-+.+.-....++|.+++.+|++..++.|-.||.+.+
T Consensus 261 ~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 261 HVKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred ceEEEEccceEEEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 999999998888877788999999999999999999999998754
No 62
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=6e-27 Score=247.12 Aligned_cols=276 Identities=24% Similarity=0.384 Sum_probs=243.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
...|+++...+....++||+.|+.+.++|..+...+.++++|...|+.+.|+++...+++++.|..|+||.... ..+..
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~-~s~~~ 297 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL-SSEPT 297 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccc-ccCcc
Confidence 34688888888877999999999999999999999999999999999999999999999999999999999987 45667
Q ss_pred EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec-----CceeEEEecCCCEEEEEEcCCeEEEEEC
Q 002591 703 TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG-----GTAQMRFQPHLGRYLAAAAENVVSILDA 777 (903)
Q Consensus 703 ~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-----~~~~v~~sp~~~~ll~~s~dg~I~i~D~ 777 (903)
....|..+|+.+..+|.++++| +++.|+++.+.|++++.++..... ...+..|+|||..|.++..|+.|+|||+
T Consensus 298 ~~~~h~~~V~~ls~h~tgeYll-sAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdl 376 (506)
T KOG0289|consen 298 SSRPHEEPVTGLSLHPTGEYLL-SASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDL 376 (506)
T ss_pred ccccccccceeeeeccCCcEEE-EecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEc
Confidence 7788999999999999998766 899999999999999998776654 3677889999999999999999999999
Q ss_pred CCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC
Q 002591 778 ETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ 856 (903)
Q Consensus 778 ~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg 856 (903)
.+...+..|.+|.++|..|.|+.+|.||+++++| .|++||+|..+..+.+..- ....+.++.|...|.+|++++.+=
T Consensus 377 ks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~--~~~~v~s~~fD~SGt~L~~~g~~l 454 (506)
T KOG0289|consen 377 KSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLD--EKKEVNSLSFDQSGTYLGIAGSDL 454 (506)
T ss_pred CCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecc--ccccceeEEEcCCCCeEEeeccee
Confidence 9999999999999999999999999999999999 7999999977433333221 233699999999999999998887
Q ss_pred eEEEEECCCCcE--E-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 857 SLELWNMSENKT--M-TLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 857 ~I~vwdl~~~~~--~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
.|++++-.+... + .+..|.+..+++.|.....+++++|.|..++|+
T Consensus 455 ~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 455 QVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred EEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEe
Confidence 788777555443 3 566788899999999999999999999999887
No 63
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.95 E-value=1e-26 Score=268.84 Aligned_cols=269 Identities=27% Similarity=0.473 Sum_probs=237.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE-eccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN-LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS 700 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~-l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~ 700 (903)
|...|.|..|. ..++++++.|.+|++||..++..+.. +.+|.+.|++++|...+.+|++|+.|.+++|||+.+ +.+
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~s-g~C 283 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCST-GEC 283 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCC-CcE
Confidence 67788899998 45899999999999999999999888 999999999999998888999999999999999887 899
Q ss_pred eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeE-EEecCCCEEEEEEcCCeEEEEECCC
Q 002591 701 LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQM-RFQPHLGRYLAAAAENVVSILDAET 779 (903)
Q Consensus 701 ~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v-~~sp~~~~ll~~s~dg~I~i~D~~t 779 (903)
..++.+|.+.|.++...+. ++++|+.|.+|++|++.++.++..+.++...| +..-++..+++++.|++|.+||+.+
T Consensus 284 ~~~l~gh~stv~~~~~~~~---~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 284 THSLQGHTSSVRCLTIDPF---LLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred EEEecCCCceEEEEEccCc---eEeeccCCceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEEEEEhhh
Confidence 9999999999999998744 67789999999999999999999888644332 2334489999999999999999999
Q ss_pred CeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeE
Q 002591 780 QACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSL 858 (903)
Q Consensus 780 ~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I 858 (903)
++++.++.+|...|.++.+... .++++|+.| +|++||+++.. +|+..+..|...+..+.+ .+.+|++++.|+.|
T Consensus 361 ~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~--~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~I 435 (537)
T KOG0274|consen 361 GKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR--KCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTI 435 (537)
T ss_pred ceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchh--hhhhhhcCCccccccccc--ccceeEeccccccE
Confidence 9999999999999999988865 899999999 89999998764 788899988888865554 56789999999999
Q ss_pred EEEECCCCcEE-EEcc-CCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 859 ELWNMSENKTM-TLTA-HEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 859 ~vwdl~~~~~~-~~~~-h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
++||..+++++ .+.+ |...|.++++. ...+++++.||.+++||
T Consensus 436 k~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 436 KLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred EEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEe
Confidence 99999999988 5566 66889998886 46788999999999996
No 64
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2.5e-27 Score=248.31 Aligned_cols=248 Identities=20% Similarity=0.288 Sum_probs=214.9
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTVR 690 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~ 690 (903)
.++.++++.+|..+|..|.||||.++|++++.|..+++||+.++.+...+. +|...+.+++|.|||..+++|+.|++|.
T Consensus 258 ~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~ 337 (519)
T KOG0293|consen 258 HFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTII 337 (519)
T ss_pred ceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEE
Confidence 578899999999999999999999999999999999999999999888875 4578899999999999999999999999
Q ss_pred EEeCCCCCceeEEeccCC-CceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe--ecCceeEEEecCCCEEEEEE
Q 002591 691 VWDADNPGYSLRTFMGHS-ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF--KGGTAQMRFQPHLGRYLAAA 767 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h~-~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ll~~s 767 (903)
.||++. ..+..+.+-. ..|.+++..+||.+++ +.+.|..|++|+.++..++... ..++..++++.++.++++.-
T Consensus 338 ~wdlDg--n~~~~W~gvr~~~v~dlait~Dgk~vl-~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL 414 (519)
T KOG0293|consen 338 MWDLDG--NILGNWEGVRDPKVHDLAITYDGKYVL-LVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNL 414 (519)
T ss_pred EecCCc--chhhcccccccceeEEEEEcCCCcEEE-EEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEc
Confidence 999984 4455555433 5699999999999877 5557999999999987766443 45788899999999999999
Q ss_pred cCCeEEEEECCCCeEEEEecCCCCC--eEEEEEcC-CCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEe
Q 002591 768 AENVVSILDAETQACRLSLQGHTKP--IDSVCWDP-SGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFH 843 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~~~~l~~h~~~--V~sl~~sp-dg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s 843 (903)
.+..|.+||++..+.+..+.||... |..-||-- +..++++|++| .|+||+..++ +.+.++.+|...|++++|+
T Consensus 415 ~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sg---kll~~LsGHs~~vNcVswN 491 (519)
T KOG0293|consen 415 QDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISG---KLLAVLSGHSKTVNCVSWN 491 (519)
T ss_pred ccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCC---ceeEeecCCcceeeEEecC
Confidence 9999999999999999999998765 33445654 44699999999 9999999887 8899999999999999999
Q ss_pred CCC-CEEEEEECCCeEEEEECCC
Q 002591 844 PTY-PSLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 844 p~g-~~l~t~s~dg~I~vwdl~~ 865 (903)
|.. .++|+++.||+|+||....
T Consensus 492 P~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 492 PADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CCCHHHhhccCCCCeEEEecCCc
Confidence 966 4678889999999998754
No 65
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=4.5e-27 Score=267.72 Aligned_cols=244 Identities=22% Similarity=0.326 Sum_probs=200.3
Q ss_pred eeeEee-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---------------------------------------
Q 002591 615 EANSVR-ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT--------------------------------------- 654 (903)
Q Consensus 615 ~~~~l~-~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t--------------------------------------- 654 (903)
....+. +|.+.|+|+.||+||+|||+||.|+.|+||.+..
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 334455 8999999999999999999999999999997643
Q ss_pred ---------------------CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEE
Q 002591 655 ---------------------LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS 713 (903)
Q Consensus 655 ---------------------~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~s 713 (903)
.+++..|.+|.+.|.+|.|+.++ +|++++.|++||||++.. ..|+.+|. |.+.|+|
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~-~~CL~~F~-HndfVTc 414 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGR-KECLKVFS-HNDFVTC 414 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCC-cceeeEEe-cCCeeEE
Confidence 01122356899999999999875 999999999999999997 78899887 9999999
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe--ecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecC--C
Q 002591 714 LDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF--KGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQG--H 789 (903)
Q Consensus 714 l~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~--h 789 (903)
|+|+|.++++|++|+-||.||||++...+.+.-. +.-++.++|.|+|+..++|+.+|.+++|+.+..+....+.- |
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 9999998999999999999999999988876544 45689999999999999999999999999998876654321 1
Q ss_pred ------CCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecC--CCceEEEEEeCCCCEEEEEECCCeEE
Q 002591 790 ------TKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCN--GNKFHSCVFHPTYPSLLVIGCYQSLE 859 (903)
Q Consensus 790 ------~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~--~~~i~si~~sp~g~~l~t~s~dg~I~ 859 (903)
...|+.+.|.|... .|++.+.| .|+|||.+.. ..+..+++. ...-....|+.||++|++++.|..|+
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~---~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VY 571 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDK---DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVY 571 (712)
T ss_pred cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccch---hhhhhhcccccCCcceeeeEccCCCEEEEeecCceEE
Confidence 22799999998443 34455555 9999999765 344444432 23345678999999999999999999
Q ss_pred EEECC
Q 002591 860 LWNMS 864 (903)
Q Consensus 860 vwdl~ 864 (903)
||++.
T Consensus 572 iW~~~ 576 (712)
T KOG0283|consen 572 IWKND 576 (712)
T ss_pred EEeCC
Confidence 99973
No 66
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=7.5e-26 Score=280.48 Aligned_cols=238 Identities=18% Similarity=0.251 Sum_probs=199.9
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCCce
Q 002591 623 TSKVICCHFSS-DGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSP-SMPRLATSSFDKTVRVWDADNPGYS 700 (903)
Q Consensus 623 ~~~V~~l~fsp-dg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWDl~~~~~~ 700 (903)
...|.+++|++ ++.+||+++.||+|+|||+.+++.+..+.+|...|++++|+| ++.+|++|+.|++|+|||+++ +.+
T Consensus 532 ~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~-~~~ 610 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ-GVS 610 (793)
T ss_pred cCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCC-CcE
Confidence 45799999987 478999999999999999999999999999999999999996 788999999999999999987 666
Q ss_pred eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEee---cCceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 701 LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVFK---GGTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 701 ~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~~---~~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
+..+..+ ..|.++.|++....+|++|+.||.|++||+++.+ .+..+. ..+..+.|. ++..+++++.|+.|+|||
T Consensus 611 ~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd 688 (793)
T PLN00181 611 IGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWD 688 (793)
T ss_pred EEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEe
Confidence 7777654 6799999976656678899999999999998765 344443 346677886 678999999999999999
Q ss_pred CCC------CeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcce--------E--EEeecCCCceEE
Q 002591 777 AET------QACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGEC--------V--HELSCNGNKFHS 839 (903)
Q Consensus 777 ~~t------~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~--------i--~~~~~~~~~i~s 839 (903)
++. ..++..+.+|...+.+++|++++.+|++|+.| .|++|+......... + .....+...|.+
T Consensus 689 ~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~ 768 (793)
T PLN00181 689 LSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISS 768 (793)
T ss_pred CCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEE
Confidence 985 35778899999999999999999999999999 999999865421110 0 011234556999
Q ss_pred EEEeCCCCEEEEEECCCeEEEEEC
Q 002591 840 CVFHPTYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 840 i~~sp~g~~l~t~s~dg~I~vwdl 863 (903)
++|++++..|++++.+|.|+||++
T Consensus 769 v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 769 VCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEEcCCCCeEEEecCCCcEEEEec
Confidence 999999999999999999999996
No 67
>PTZ00420 coronin; Provisional
Probab=99.95 E-value=1.5e-25 Score=259.80 Aligned_cols=247 Identities=15% Similarity=0.190 Sum_probs=200.1
Q ss_pred EeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCCc-------eeEEeccCCCceE
Q 002591 641 GGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS-MPRLATSSFDKTVRVWDADNPGY-------SLRTFMGHSASVM 712 (903)
Q Consensus 641 gs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspd-g~~Lasgs~Dg~I~IWDl~~~~~-------~~~~~~~h~~~V~ 712 (903)
|+.++.|+||+......+..+.+|...|.+++|+|+ +.+|++|+.|++|+|||+.+.+. .+..+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 667889999998887888999999999999999997 78999999999999999976332 3456789999999
Q ss_pred EEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCC
Q 002591 713 SLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHT 790 (903)
Q Consensus 713 sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~ 790 (903)
+++|+|++..+|++++.|++|+|||+++++.+..+. ..+.++.|++++..+++++.|+.|+|||+++++.+..+.+|.
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~ 209 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHD 209 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEeccc
Confidence 999999988888899999999999999988665553 457889999999999999999999999999999999999998
Q ss_pred CCeEEE-----EEcCCCCEEEEEeCC-----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEE
Q 002591 791 KPIDSV-----CWDPSGELLASVSED-----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLEL 860 (903)
Q Consensus 791 ~~V~sl-----~~spdg~~lasgs~d-----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~v 860 (903)
+.+.+. .|++++.+|++++.+ .|+|||++..........+..+...+......+++.++++|+.|+.|++
T Consensus 210 g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~ 289 (568)
T PTZ00420 210 GGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRY 289 (568)
T ss_pred CCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEE
Confidence 765433 345788888887655 5999999965433333334333444444445566888999999999999
Q ss_pred EECCCCcEEEE--ccCCCCEEEEEEecCC
Q 002591 861 WNMSENKTMTL--TAHEGLIAALAVSTET 887 (903)
Q Consensus 861 wdl~~~~~~~~--~~h~~~V~sl~~spdg 887 (903)
|++..+....+ ..+..++.+++|.|..
T Consensus 290 ~e~~~~~~~~l~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 290 YQHSLGSIRKVNEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred EEccCCcEEeecccccCCCccceEEcccc
Confidence 99988765533 2366788999999864
No 68
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=7.8e-27 Score=236.79 Aligned_cols=287 Identities=17% Similarity=0.323 Sum_probs=244.0
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
.+..++.+.+|.+.|+.++....-..+.+++.|.+.+||.+++++++.++.+|.+.|++|+|++.+.++++++.|++..|
T Consensus 137 ~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHI 216 (481)
T KOG0300|consen 137 KFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHI 216 (481)
T ss_pred eEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHH
Confidence 56778889999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred EeC------CC-----------------------------C----CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCc
Q 002591 692 WDA------DN-----------------------------P----GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE 732 (903)
Q Consensus 692 WDl------~~-----------------------------~----~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~ 732 (903)
|.. .. . ..++..+++|...|.+..|...+..++ +++.|.+
T Consensus 217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~v-TaSWDRT 295 (481)
T KOG0300|consen 217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMV-TASWDRT 295 (481)
T ss_pred HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceee-eeecccc
Confidence 952 00 0 023567889999999999998777555 9999999
Q ss_pred EEEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEE
Q 002591 733 IRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASV 808 (903)
Q Consensus 733 I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasg 808 (903)
..+||+++++.+..+.++ .+.++-+|....+++++.|.+.++||.+.. ..+..|.+|...|+++.|.-+ ..+++|
T Consensus 296 AnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d-d~vVSg 374 (481)
T KOG0300|consen 296 ANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD-DRVVSG 374 (481)
T ss_pred ceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC-Cceeec
Confidence 999999999999988775 455677888888888999999999999965 567789999999999999874 567889
Q ss_pred eCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEE-----EccCCCCEEEEE
Q 002591 809 SED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMT-----LTAHEGLIAALA 882 (903)
Q Consensus 809 s~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~-----~~~h~~~V~sl~ 882 (903)
++| +|+|||+++.. ..+..+.. ...++.++.+..++.|+.-..+..|++||++..++.. ..+|...|+|++
T Consensus 375 SDDrTvKvWdLrNMR--splATIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~A 451 (481)
T KOG0300|consen 375 SDDRTVKVWDLRNMR--SPLATIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCA 451 (481)
T ss_pred CCCceEEEeeecccc--Ccceeeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeee
Confidence 999 99999998763 23333333 6788899999888888888888899999999887763 347999999999
Q ss_pred EecCCC--EEEEEecCCcEEEcC
Q 002591 883 VSTETG--YVASASHDKFVKLWK 903 (903)
Q Consensus 883 ~spdg~--~LaSgs~DG~I~IWd 903 (903)
|..+-. -|++|+.|..+.-|+
T Consensus 452 W~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 452 WLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred ccccCcccccccccccceeeeeE
Confidence 976543 488999999988885
No 69
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=5.5e-27 Score=264.46 Aligned_cols=242 Identities=25% Similarity=0.474 Sum_probs=220.6
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC
Q 002591 660 NLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 739 (903)
Q Consensus 660 ~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~ 739 (903)
.|+..+..|..++|+|...+++++-..|.|.+||.+- +.++..|..|.++|..++|||..+ ++++|++|-.|++|+..
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM-~tli~rFdeHdGpVRgv~FH~~qp-lFVSGGDDykIkVWnYk 81 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRM-GTLIDRFDEHDGPVRGVDFHPTQP-LFVSGGDDYKIKVWNYK 81 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhh-hhHHhhhhccCCccceeeecCCCC-eEEecCCccEEEEEecc
Confidence 4556678899999999999999999999999999987 788999999999999999999977 67799999999999999
Q ss_pred CCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEE
Q 002591 740 NGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRV 815 (903)
Q Consensus 740 t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~i 815 (903)
+.+|+.++.++ +..+.|++.-.++++++.|-+|+||+..+.+++..+.+|...|.|..|+|...+|++++-| +|||
T Consensus 82 ~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRV 161 (1202)
T KOG0292|consen 82 TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRV 161 (1202)
T ss_pred cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEE
Confidence 99999998876 5667799999999999999999999999999999999999999999999999999999999 9999
Q ss_pred EECCCCC--------------------------CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 816 WTVGSGS--------------------------EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 816 wdl~s~~--------------------------~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
||+.... .....+.+.+|+..|+-++|+|.-..|++|+.|+.|++|.++..+..
T Consensus 162 WDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaW 241 (1202)
T KOG0292|consen 162 WDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAW 241 (1202)
T ss_pred EeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccce
Confidence 9985321 11123567889999999999999999999999999999999887765
Q ss_pred ---EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 870 ---TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 870 ---~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+..+|.+.|.++.|+|.-.+|+|.|+|++|+|||
T Consensus 242 EvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwD 278 (1202)
T KOG0292|consen 242 EVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWD 278 (1202)
T ss_pred eehhhhcccCCcceEEecCccceeEecCCCccEEEEe
Confidence 6789999999999999999999999999999997
No 70
>PTZ00421 coronin; Provisional
Probab=99.95 E-value=2.5e-25 Score=257.01 Aligned_cols=263 Identities=15% Similarity=0.230 Sum_probs=206.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee-------------EEeccCCCCeEEEEECC-CCCEEEEEeCCC
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSK-------------TNLEEHSSLITDVRFSP-SMPRLATSSFDK 687 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~-------------~~l~~h~~~V~~l~fsp-dg~~Lasgs~Dg 687 (903)
|-..|....+++|+..+++++.+..+..|+...+..+ ..+.+|.+.|++++|+| ++.+|++|+.|+
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 3345666666677666666666666666764432221 24678999999999999 888999999999
Q ss_pred cEEEEeCCCCC------ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEec
Q 002591 688 TVRVWDADNPG------YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQP 758 (903)
Q Consensus 688 ~I~IWDl~~~~------~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp 758 (903)
+|+|||+.+.+ ..+..+.+|...|.+++|+|++..+|++++.|++|+|||+++++.+..+.. .+.+++|++
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~sp 178 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNL 178 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEEC
Confidence 99999997632 356788999999999999998777888999999999999999988877754 477899999
Q ss_pred CCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCC-eEEEEEcCCCCEEEEEe----CC-eEEEEECCCCCCcceEEEeec
Q 002591 759 HLGRYLAAAAENVVSILDAETQACRLSLQGHTKP-IDSVCWDPSGELLASVS----ED-SVRVWTVGSGSEGECVHELSC 832 (903)
Q Consensus 759 ~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~-V~sl~~spdg~~lasgs----~d-~I~iwdl~s~~~~~~i~~~~~ 832 (903)
++..+++++.|+.|+|||+++++.+..+.+|... +..+.|.+++.+|++++ .| .|++||+++... .+.....
T Consensus 179 dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~--p~~~~~~ 256 (493)
T PTZ00421 179 DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMAS--PYSTVDL 256 (493)
T ss_pred CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCC--ceeEecc
Confidence 9999999999999999999999999999988765 45678999888777654 24 899999987543 2322222
Q ss_pred -CCCceEEEEEeCCCCEEEEEE-CCCeEEEEECCCCcEEEE--ccCCCCEEEEEEecC
Q 002591 833 -NGNKFHSCVFHPTYPSLLVIG-CYQSLELWNMSENKTMTL--TAHEGLIAALAVSTE 886 (903)
Q Consensus 833 -~~~~i~si~~sp~g~~l~t~s-~dg~I~vwdl~~~~~~~~--~~h~~~V~sl~~spd 886 (903)
....+....|++++.+|++++ .|+.|++||+.+++.+.. ..+...+.+++|.|.
T Consensus 257 d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 257 DQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred CCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 234556677899999999888 599999999999887732 235567888888774
No 71
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.95 E-value=8e-26 Score=229.40 Aligned_cols=270 Identities=16% Similarity=0.278 Sum_probs=222.1
Q ss_pred cCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCC-Ccee-EEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 621 ASTSKVICCHFSS-DGKLLATGGHDKKAVLWHTDT-LKSK-TNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 621 ~H~~~V~~l~fsp-dg~~Latgs~Dg~V~vWd~~t-~~~~-~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
.-.+.|.+|+||| ...+|++|+.|++||+|++.. +..+ +....|.++|.+++|+.||..+++|+.|+.+++||+.+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S- 103 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLAS- 103 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccC-
Confidence 4567899999999 555777999999999999985 3333 44567999999999999999999999999999999998
Q ss_pred CceeEEeccCCCceEEEEecCCCC-eEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~-~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
+ -+..+..|..+|.++.|.+... .+|+||+.|.+|++||.+....+.++.-+..+.+.......++++..+..|.+|+
T Consensus 104 ~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vyn 182 (347)
T KOG0647|consen 104 G-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYN 182 (347)
T ss_pred C-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEE
Confidence 3 5677788999999999987644 3778999999999999999999988888877777777788899999999999999
Q ss_pred CCCCeEEEE-ec-CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCC---------CceEEEEEeC
Q 002591 777 AETQACRLS-LQ-GHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNG---------NKFHSCVFHP 844 (903)
Q Consensus 777 ~~t~~~~~~-l~-~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~---------~~i~si~~sp 844 (903)
++.+..... +. .-.-.++||+...|....+.|+-+ .+.|..+..+.. +.-..+++|. ..|.+++|+|
T Consensus 183 L~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~-~~nFtFkCHR~~~~~~~~VYaVNsi~FhP 261 (347)
T KOG0647|consen 183 LENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP-KDNFTFKCHRSTNSVNDDVYAVNSIAFHP 261 (347)
T ss_pred cCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc-cCceeEEEeccCCCCCCceEEecceEeec
Confidence 987643322 11 123458899999888877888777 888888876533 3344455554 2478899999
Q ss_pred CCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEE
Q 002591 845 TYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 845 ~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSg 893 (903)
....|++++.||++.+||-.....+ ....|..+|++++|+.+|.++|-+
T Consensus 262 ~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 262 VHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred ccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 9999999999999999999877666 668899999999999999988765
No 72
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=6.3e-26 Score=264.21 Aligned_cols=277 Identities=20% Similarity=0.337 Sum_probs=233.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCC------------CceeEEeccCCCCeEEEEECCCCCEEEEEeCCC
Q 002591 622 STSKVICCHFSSDGKLLATGG--HDKKAVLWHTDT------------LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDK 687 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs--~Dg~V~vWd~~t------------~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg 687 (903)
+...|.+|+.+|||..+|||+ .|+.++||+.+. .+.+.+...|.+.|+|++|++||++||+|++|+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~ 91 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDR 91 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcc
Confidence 455699999999999999999 999999998642 234456678999999999999999999999999
Q ss_pred cEEEEeCCC------C-----------CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC
Q 002591 688 TVRVWDADN------P-----------GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG 750 (903)
Q Consensus 688 ~I~IWDl~~------~-----------~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~ 750 (903)
.|.||+... . -+++..+.+|...|.+++|+|++. ++++++.|++|.|||.++.+++++++++
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~-~lvS~s~DnsViiwn~~tF~~~~vl~~H 170 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS-LLVSVSLDNSVIIWNAKTFELLKVLRGH 170 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc-EEEEecccceEEEEccccceeeeeeecc
Confidence 999999872 1 135778889999999999999855 7779999999999999999988888764
Q ss_pred ---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCC------CCeEEEEEcCCCCEEEEEeC----C-eEEEE
Q 002591 751 ---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHT------KPIDSVCWDPSGELLASVSE----D-SVRVW 816 (903)
Q Consensus 751 ---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~------~~V~sl~~spdg~~lasgs~----d-~I~iw 816 (903)
+..+.|.|-|.+|++-+.|++|+||++.+..+.+.+..+. ..+..+.|+|||.+|++... . ++.|.
T Consensus 171 ~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~Ii 250 (942)
T KOG0973|consen 171 QSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAII 250 (942)
T ss_pred cccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEE
Confidence 6778999999999999999999999988877777766543 34788999999999998642 2 78888
Q ss_pred ECCCCCCcceEEEeecCCCceEEEEEeCC-----CC------------EEEEEECCCeEEEEECCCCcEEEE--ccCCCC
Q 002591 817 TVGSGSEGECVHELSCNGNKFHSCVFHPT-----YP------------SLLVIGCYQSLELWNMSENKTMTL--TAHEGL 877 (903)
Q Consensus 817 dl~s~~~~~~i~~~~~~~~~i~si~~sp~-----g~------------~l~t~s~dg~I~vwdl~~~~~~~~--~~h~~~ 877 (903)
+-.+. ++-..+.+|..++.++.|+|. .. .+++|+.|++|.||.....+.+.+ .-....
T Consensus 251 eR~tW---k~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~S 327 (942)
T KOG0973|consen 251 ERGTW---KVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKS 327 (942)
T ss_pred ecCCc---eeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCc
Confidence 87554 667788899999999999882 11 577889999999999977777633 335678
Q ss_pred EEEEEEecCCCEEEEEecCCcEEEc
Q 002591 878 IAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 878 V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
|.+++|+|||-.|+.+|.||+|.++
T Consensus 328 I~DmsWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 328 IVDMSWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred eeeeeEcCCCCeEEEEecCCeEEEE
Confidence 9999999999999999999999875
No 73
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=6.7e-26 Score=252.74 Aligned_cols=265 Identities=22% Similarity=0.430 Sum_probs=227.1
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEecc-C
Q 002591 629 CHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMG-H 707 (903)
Q Consensus 629 l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~-h 707 (903)
++|+ ....||+|. ...|++|+..++........+...|+++.|+++|.+|++|..+|.|.|||..+ .+.++.+.+ |
T Consensus 183 ldWs-s~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~-~k~~~~~~~~h 259 (484)
T KOG0305|consen 183 LDWS-SANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKE-QKKTRTLRGSH 259 (484)
T ss_pred hhcc-cCCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhh-ccccccccCCc
Confidence 6677 344777775 45799999999887776666689999999999999999999999999999987 666778887 9
Q ss_pred CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE-ee---cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEE
Q 002591 708 SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV-FK---GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACR 783 (903)
Q Consensus 708 ~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~-~~---~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~ 783 (903)
...|.+++|. ..++.+|+.|+.|.++|++....... +. ..+..+.|++++.+++.++.|+.+.|||.....++
T Consensus 260 ~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~ 336 (484)
T KOG0305|consen 260 ASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPK 336 (484)
T ss_pred CceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCcccc
Confidence 9999999998 34777999999999999998764433 33 34666789999999999999999999999999999
Q ss_pred EEecCCCCCeEEEEEcCC-CCEEEEEe--CC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEEC--CCe
Q 002591 784 LSLQGHTKPIDSVCWDPS-GELLASVS--ED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGC--YQS 857 (903)
Q Consensus 784 ~~l~~h~~~V~sl~~spd-g~~lasgs--~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~--dg~ 857 (903)
..+..|...|.+++|+|- ..+||+|+ .| .|++||+.++.. +..+.. ...|..+.|++..+.|+++.. ++.
T Consensus 337 ~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~---i~~vdt-gsQVcsL~Wsk~~kEi~sthG~s~n~ 412 (484)
T KOG0305|consen 337 FTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR---IDSVDT-GSQVCSLIWSKKYKELLSTHGYSENQ 412 (484)
T ss_pred EEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE---eccccc-CCceeeEEEcCCCCEEEEecCCCCCc
Confidence 999999999999999994 45888875 44 899999998744 333332 788999999999988888765 468
Q ss_pred EEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 858 LELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 858 I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|.||++.+.+.+ .+.+|...|..++++|||..|++|+.|.++++|+
T Consensus 413 i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 413 ITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWN 459 (484)
T ss_pred EEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEecc
Confidence 999999998777 8889999999999999999999999999999996
No 74
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.95 E-value=4.1e-27 Score=232.48 Aligned_cols=252 Identities=19% Similarity=0.264 Sum_probs=223.8
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
+-.-+.+|.+|.+.|+..++..+-.+.|+++.|-+.+|||.-++..+..| .|..-|.+++|+.|.++|++|+.++.+||
T Consensus 48 tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf-~hkhivk~~af~~ds~~lltgg~ekllrv 126 (334)
T KOG0278|consen 48 TGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSF-EHKHIVKAVAFSQDSNYLLTGGQEKLLRV 126 (334)
T ss_pred CCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhh-hhhheeeeEEecccchhhhccchHHHhhh
Confidence 44457789999999999999999999999999999999999999999988 48888999999999999999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcC
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~d 769 (903)
||++.+......+.+|++.|..+.|......+| ++.+|++||+||.++++.+..+. .++.++.+++++ .+++.+..
T Consensus 127 fdln~p~App~E~~ghtg~Ir~v~wc~eD~~iL-SSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG-~ilTia~g 204 (334)
T KOG0278|consen 127 FDLNRPKAPPKEISGHTGGIRTVLWCHEDKCIL-SSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDG-RILTIAYG 204 (334)
T ss_pred hhccCCCCCchhhcCCCCcceeEEEeccCceEE-eeccCCceEEEEeccCcEEEEEecCCCCcceeeccCC-CEEEEecC
Confidence 999998888999999999999999998766665 77899999999999999887664 678889999885 45666777
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCE
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~ 848 (903)
+.|.+||..+..++..++ -...|.+...+|+..++++|++| .++.||+.++.+..+. .++|.++|.++.|+|+|..
T Consensus 205 ssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~--nkgh~gpVhcVrFSPdGE~ 281 (334)
T KOG0278|consen 205 SSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSY--NKGHFGPVHCVRFSPDGEL 281 (334)
T ss_pred ceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeec--ccCCCCceEEEEECCCCce
Confidence 899999999999888776 56779999999999999999999 9999999998554442 4788999999999999999
Q ss_pred EEEEECCCeEEEEECCCCcEE
Q 002591 849 LLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 849 l~t~s~dg~I~vwdl~~~~~~ 869 (903)
.++|+.||+|+||-...++..
T Consensus 282 yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 282 YASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred eeccCCCceEEEEEecCCCch
Confidence 999999999999998776544
No 75
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=6.7e-26 Score=222.31 Aligned_cols=254 Identities=22% Similarity=0.325 Sum_probs=218.8
Q ss_pred CCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEE
Q 002591 601 GGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL 680 (903)
Q Consensus 601 ~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~L 680 (903)
..+...+|+...-.+++++.+|...|.+++.+.|...|++|+.|+.|.+||+++|+.++.+++|.+.|+.++|+.+...+
T Consensus 37 sdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv 116 (307)
T KOG0316|consen 37 SDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVV 116 (307)
T ss_pred CCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEE
Confidence 33444444444567889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEeCCCC-CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe-ecCceeEEEec
Q 002591 681 ATSSFDKTVRVWDADNP-GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF-KGGTAQMRFQP 758 (903)
Q Consensus 681 asgs~Dg~I~IWDl~~~-~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~-~~~~~~v~~sp 758 (903)
++|+.|.+|++||.++. .+++..+....+.|.+|... ++.|++|+.||++|.||++.|.....+ ..++++++|++
T Consensus 117 ~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~---~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~ 193 (307)
T KOG0316|consen 117 ASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA---EHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSK 193 (307)
T ss_pred EeccccceeEEEEcccCCCCccchhhhhcCceeEEEec---ccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecC
Confidence 99999999999999864 35678888888999999997 336779999999999999999877654 45789999999
Q ss_pred CCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCe--EEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCC
Q 002591 759 HLGRYLAAAAENVVSILDAETQACRLSLQGHTKPI--DSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGN 835 (903)
Q Consensus 759 ~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V--~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~ 835 (903)
+++..++++.|++|++.|-.+|+.+..+++|...- ..+++......+++|++| .|++||+... ..+..+..+..
T Consensus 194 d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~---~~~sk~~~~~~ 270 (307)
T KOG0316|consen 194 DGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE---TQISKLSVVST 270 (307)
T ss_pred CCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccc---eeeeeeccCCc
Confidence 99999999999999999999999999999997653 345677777899999999 9999999876 56666766666
Q ss_pred c-eEEEEEeCCCCEEEEEECCCeEEEE
Q 002591 836 K-FHSCVFHPTYPSLLVIGCYQSLELW 861 (903)
Q Consensus 836 ~-i~si~~sp~g~~l~t~s~dg~I~vw 861 (903)
. +.++.++|.-..|+++...+ +.+|
T Consensus 271 v~v~dl~~hp~~~~f~~A~~~~-~~~~ 296 (307)
T KOG0316|consen 271 VIVTDLSCHPTMDDFITATGHG-DLFW 296 (307)
T ss_pred eeEEeeecccCccceeEecCCc-eece
Confidence 6 89999999988888876554 4444
No 76
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.94 E-value=8.7e-26 Score=235.23 Aligned_cols=259 Identities=20% Similarity=0.340 Sum_probs=218.9
Q ss_pred CcCCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCce----eEEeccCCCCeE
Q 002591 597 PRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGK---LLATGGHDKKAVLWHTDTLKS----KTNLEEHSSLIT 669 (903)
Q Consensus 597 ~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~---~Latgs~Dg~V~vWd~~t~~~----~~~l~~h~~~V~ 669 (903)
..|+..|+|+. ..+....+.+|.++|.+++|..... .|++++.|.++++|.++.++. +....+|...|-
T Consensus 122 sYDg~~riWd~----~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~ 197 (423)
T KOG0313|consen 122 SYDGTSRIWDL----KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVD 197 (423)
T ss_pred ecCCeeEEEec----CCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhccccccee
Confidence 34566677765 5578899999999999988864333 699999999999999886543 334459999999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCC------------------------CceeEEeccCCCceEEEEecCCCCeEEE
Q 002591 670 DVRFSPSMPRLATSSFDKTVRVWDADNP------------------------GYSLRTFMGHSASVMSLDFHPNKDDLIC 725 (903)
Q Consensus 670 ~l~fspdg~~Lasgs~Dg~I~IWDl~~~------------------------~~~~~~~~~h~~~V~sl~fsp~~~~ll~ 725 (903)
+|+..+++..+++|+.|.+|.||+..+. +.++.++.+|..+|.++.|++ ...++
T Consensus 198 sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~y 275 (423)
T KOG0313|consen 198 SVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIY 275 (423)
T ss_pred EEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC--CCceE
Confidence 9999999999999999999999993210 134667889999999999998 34677
Q ss_pred EEeCCCcEEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEcCCeEEEEECCCC---eEEEEecCCCCCeEEEEEcC
Q 002591 726 SCDGDGEIRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAAENVVSILDAETQ---ACRLSLQGHTKPIDSVCWDP 800 (903)
Q Consensus 726 sgs~Dg~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~---~~~~~l~~h~~~V~sl~~sp 800 (903)
+++.|.+|+.||++++.++..+.+ ...++.+++....+++++.|..|++||.+++ .....+.+|...|.++.|+|
T Consensus 276 S~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp 355 (423)
T KOG0313|consen 276 SVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSP 355 (423)
T ss_pred eecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCC
Confidence 999999999999999998877765 4678889999999999999999999999986 35667889999999999999
Q ss_pred CCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 801 SGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 801 dg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
... .|++++.| ++++||+|+.. ..+..+..|...|.++.|. ++..|++|+.|++|+|+...
T Consensus 356 ~~~~~~~S~S~D~t~klWDvRS~k--~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 356 TNEFQLVSGSYDNTVKLWDVRSTK--APLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred CCceEEEEEecCCeEEEEEeccCC--CcceeeccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence 666 78899999 99999999863 4788889999999999997 45679999999999999753
No 77
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=3.7e-24 Score=208.37 Aligned_cols=287 Identities=21% Similarity=0.296 Sum_probs=234.6
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC------C---------ceeEEeccCCCCeEEEEECCC
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT------L---------KSKTNLEEHSSLITDVRFSPS 676 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t------~---------~~~~~l~~h~~~V~~l~fspd 676 (903)
.|..+..++ .+..|.+++|+|.|.+.|+|+..++++|.-... + ...+.-+.|.+.|.|.+|+|+
T Consensus 22 ~f~~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 22 HFEAINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred ceEEEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 455555554 567899999999999999999999998874321 1 111233568999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCc----eeEEeccCCCceEEEEecCC---CCeEEEEEe-CCCcEEEEEcCCCeeeEEee
Q 002591 677 MPRLATSSFDKTVRVWDADNPGY----SLRTFMGHSASVMSLDFHPN---KDDLICSCD-GDGEIRYWSINNGSCTRVFK 748 (903)
Q Consensus 677 g~~Lasgs~Dg~I~IWDl~~~~~----~~~~~~~h~~~V~sl~fsp~---~~~ll~sgs-~Dg~I~iwDi~t~~~~~~~~ 748 (903)
|.+|++|+.|++|++.-++.... .-..|.-|.+.|..++|..+ +..++++++ .|..|++-|..++.....+.
T Consensus 101 geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~s 180 (350)
T KOG0641|consen 101 GELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALS 180 (350)
T ss_pred cCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeec
Confidence 99999999999999987764221 22456779999999999654 445666654 47778888888888888887
Q ss_pred cCceeEE--EecCCCEEEEEEcCCeEEEEECCCCeEEEEecC--C-----CCCeEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 002591 749 GGTAQMR--FQPHLGRYLAAAAENVVSILDAETQACRLSLQG--H-----TKPIDSVCWDPSGELLASVSED-SVRVWTV 818 (903)
Q Consensus 749 ~~~~~v~--~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~--h-----~~~V~sl~~spdg~~lasgs~d-~I~iwdl 818 (903)
++...+- ++.++-.+++++.|.+|++||++-..++.++.. | .+.|.+++..|.|++|++|-.| ...+||+
T Consensus 181 ghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydi 260 (350)
T KOG0641|consen 181 GHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDI 260 (350)
T ss_pred CCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEe
Confidence 7655432 455666788888899999999999999887753 2 3569999999999999999999 9999999
Q ss_pred CCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc-----EEEEccCCCCEEEEEEecCCCEEEEE
Q 002591 819 GSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK-----TMTLTAHEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 819 ~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~-----~~~~~~h~~~V~sl~~spdg~~LaSg 893 (903)
+.+ ..+..+..|...|.++.|+|...|+++++.|..|++-|+...- .+.+..|.+.+..+.|+|..--|++.
T Consensus 261 rg~---r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfiss 337 (350)
T KOG0641|consen 261 RGG---RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISS 337 (350)
T ss_pred eCC---ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeec
Confidence 987 7888899999999999999999999999999999999987542 33667899999999999999889999
Q ss_pred ecCCcEEEc
Q 002591 894 SHDKFVKLW 902 (903)
Q Consensus 894 s~DG~I~IW 902 (903)
+.|.++.+|
T Consensus 338 sadkt~tlw 346 (350)
T KOG0641|consen 338 SADKTATLW 346 (350)
T ss_pred cCcceEEEe
Confidence 999999999
No 78
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=6.9e-26 Score=224.67 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=205.9
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECC-CCceeEEeccCCCCeEEEEECCCC-CEEEEEeCCCc
Q 002591 612 SFKEANSVRASTSKVICCHFSSDG-KLLATGGHDKKAVLWHTD-TLKSKTNLEEHSSLITDVRFSPSM-PRLATSSFDKT 688 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg-~~Latgs~Dg~V~vWd~~-t~~~~~~l~~h~~~V~~l~fspdg-~~Lasgs~Dg~ 688 (903)
.+.+...+. -.+.+..++|+++. ..+++++.||+++|||+. ...++..+++|...|.++.|++.. ..+++++.|++
T Consensus 50 gi~e~~s~d-~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~T 128 (311)
T KOG0277|consen 50 GIQECQSYD-TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGT 128 (311)
T ss_pred CeEEEEeee-cccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCc
Confidence 444555554 45679999999865 588889999999999965 557889999999999999999864 46788899999
Q ss_pred EEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee---cCceeEEEecCCC-EEE
Q 002591 689 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK---GGTAQMRFQPHLG-RYL 764 (903)
Q Consensus 689 I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~---~~~~~v~~sp~~~-~ll 764 (903)
|++|+... ...+.++.+|...|+...|+|....++++++.|+++++||++..-....++ ..+.++.|+..+. .++
T Consensus 129 iKLW~~~r-~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~ 207 (311)
T KOG0277|consen 129 IKLWDPNR-PNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLA 207 (311)
T ss_pred eEeecCCC-CcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEE
Confidence 99999987 677899999999999999999999999999999999999998643322243 3566777887765 456
Q ss_pred EEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEE
Q 002591 765 AAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCV 841 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~ 841 (903)
+++.|+.|++||++.. .++.++.+|.-.|+.|+|+|... +|++++.| +++|||..... .++.....|..-+..+.
T Consensus 208 Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d--s~~e~~~~HtEFv~g~D 285 (311)
T KOG0277|consen 208 TGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD--SAIETVDHHTEFVCGLD 285 (311)
T ss_pred ecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccch--hhhhhhhccceEEeccc
Confidence 6677999999999986 57888999999999999999655 99999999 99999997542 45566667777888888
Q ss_pred EeC-CCCEEEEEECCCeEEEEEC
Q 002591 842 FHP-TYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 842 ~sp-~g~~l~t~s~dg~I~vwdl 863 (903)
|++ +...++.++.|+.++||+-
T Consensus 286 ws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 286 WSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred cccccCceeeecccccceeeecc
Confidence 887 5678999999999999984
No 79
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.94 E-value=3.1e-25 Score=256.48 Aligned_cols=250 Identities=24% Similarity=0.436 Sum_probs=217.8
Q ss_pred cccCcceeeeeE-eecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC
Q 002591 607 VSQGFSFKEANS-VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 685 (903)
Q Consensus 607 ~~~~~~~~~~~~-l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~ 685 (903)
.++......+.. +.+|.+.|++++|..-+.+|++|+.|.+++|||+.++.+..++.+|...|.++...+. ++++|+.
T Consensus 232 ~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~--~~~sgs~ 309 (537)
T KOG0274|consen 232 LWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDPF--LLVSGSR 309 (537)
T ss_pred EeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccCc--eEeeccC
Confidence 333345566666 9999999999999987789999999999999999999999999999999999987654 7888999
Q ss_pred CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEE-EecCC-CEE
Q 002591 686 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMR-FQPHL-GRY 763 (903)
Q Consensus 686 Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~-~sp~~-~~l 763 (903)
|.+|++|++.+ +.++.++.+|.+.|.++.++ ..++++|+.|++|++||+.+++|++++.++...+. +..+. ..+
T Consensus 310 D~tVkVW~v~n-~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~ 385 (537)
T KOG0274|consen 310 DNTVKVWDVTN-GACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRL 385 (537)
T ss_pred CceEEEEeccC-cceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceE
Confidence 99999999997 88899999999999999998 33677999999999999999999999998765443 24444 899
Q ss_pred EEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeec-CCCceEEE
Q 002591 764 LAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSC-NGNKFHSC 840 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~-~~~~i~si 840 (903)
+.++.|+.|++||+++. +++.++.+|...|..+.+. +++|++++.| +|++||..++ .+++.+.. +...|..+
T Consensus 386 ~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~--~~~Lvs~~aD~~Ik~WD~~~~---~~~~~~~~~~~~~v~~l 460 (537)
T KOG0274|consen 386 LSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLR--DNFLVSSSADGTIKLWDAEEG---ECLRTLEGRHVGGVSAL 460 (537)
T ss_pred EeeeeccceEeecCCchhhhhhhhcCCcccccccccc--cceeEeccccccEEEeecccC---ceeeeeccCCcccEEEe
Confidence 99999999999999999 9999999999999776654 7899999999 9999999877 67777777 56777777
Q ss_pred EEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 841 VFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 841 ~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
++. ...+++++.++.+++||+++++..
T Consensus 461 ~~~--~~~il~s~~~~~~~l~dl~~~~~~ 487 (537)
T KOG0274|consen 461 ALG--KEEILCSSDDGSVKLWDLRSGTLI 487 (537)
T ss_pred ecC--cceEEEEecCCeeEEEecccCchh
Confidence 775 567999999999999999999877
No 80
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=4.6e-25 Score=225.07 Aligned_cols=263 Identities=18% Similarity=0.308 Sum_probs=220.4
Q ss_pred cceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC--EEEEEeCCCc
Q 002591 611 FSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP--RLATSSFDKT 688 (903)
Q Consensus 611 ~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~--~Lasgs~Dg~ 688 (903)
+++.+...+.+|.+.|+|++.+ +.++|+|+.|-+|+|||+.+...+..+-.|.+.|+++.|.++-. .|++|+.||.
T Consensus 31 ~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~ 108 (362)
T KOG0294|consen 31 PTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH 108 (362)
T ss_pred eeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCc
Confidence 3778888999999999999986 78999999999999999999999999999999999999998866 8999999999
Q ss_pred EEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe--ecCceeEEEecCCCEEEEE
Q 002591 689 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF--KGGTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 689 I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ll~~ 766 (903)
|.+|+... -.++.++++|...|+.|+.+|.++ +.++.+.|+.+++||+-+|+.-.+. +.....+.|+|.|.+|+++
T Consensus 109 i~iw~~~~-W~~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~ 186 (362)
T KOG0294|consen 109 IIIWRVGS-WELLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVS 186 (362)
T ss_pred EEEEEcCC-eEEeeeecccccccceeEecCCCc-eEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEE
Confidence 99999987 688999999999999999999976 6668888999999999998855444 3455669999999988877
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEE--e
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVF--H 843 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~--s 843 (903)
.. +.|-||.+++.+....+. ....+.|+.|.. +.+|++|.++ .|++||..+. .+...+..|.+.|..+.+ .
T Consensus 187 ~~-~~i~i~q~d~A~v~~~i~-~~~r~l~~~~l~-~~~L~vG~d~~~i~~~D~ds~---~~~~~~~AH~~RVK~i~~~~~ 260 (362)
T KOG0294|consen 187 GR-NKIDIYQLDNASVFREIE-NPKRILCATFLD-GSELLVGGDNEWISLKDTDSD---TPLTEFLAHENRVKDIASYTN 260 (362)
T ss_pred ec-cEEEEEecccHhHhhhhh-ccccceeeeecC-CceEEEecCCceEEEeccCCC---ccceeeecchhheeeeEEEec
Confidence 65 568899888877666555 335677777775 5567777777 9999999874 788999999999999884 4
Q ss_pred CCCCEEEEEECCCeEEEEECCCC-----cEEEEccCCCCEEEEEE
Q 002591 844 PTYPSLLVIGCYQSLELWNMSEN-----KTMTLTAHEGLIAALAV 883 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vwdl~~~-----~~~~~~~h~~~V~sl~~ 883 (903)
|++.+|++++.||.|+|||++.. +.+........++|+..
T Consensus 261 ~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~ 305 (362)
T KOG0294|consen 261 PEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRV 305 (362)
T ss_pred CCceEEEEeccCceEEEEEccccccCCcceeEEeecCCccceeee
Confidence 57889999999999999999876 33333344566777655
No 81
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=5.2e-25 Score=256.57 Aligned_cols=250 Identities=23% Similarity=0.395 Sum_probs=215.0
Q ss_pred eeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC------------------CceeEEeccCCCCeEEEEECC
Q 002591 614 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT------------------LKSKTNLEEHSSLITDVRFSP 675 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t------------------~~~~~~l~~h~~~V~~l~fsp 675 (903)
+.+.+...|.+.|+|+.|++||.+||+|++|+.|.||+... .+.+..+.+|...|.+++|+|
T Consensus 60 k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp 139 (942)
T KOG0973|consen 60 KHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP 139 (942)
T ss_pred hhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC
Confidence 45667788999999999999999999999999999998662 246778899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec------
Q 002591 676 SMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG------ 749 (903)
Q Consensus 676 dg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~------ 749 (903)
++.+||+++.|++|.||+..+. +.++++.+|.+.|..+.|.|-|. +||+-+.|++|+||++.+..+.+.+..
T Consensus 140 ~~~~lvS~s~DnsViiwn~~tF-~~~~vl~~H~s~VKGvs~DP~Gk-y~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~ 217 (942)
T KOG0973|consen 140 DDSLLVSVSLDNSVIIWNAKTF-ELLKVLRGHQSLVKGVSWDPIGK-YFASQSDDRTLKVWRTSDWGIEKSITKPFEESP 217 (942)
T ss_pred CccEEEEecccceEEEEccccc-eeeeeeecccccccceEECCccC-eeeeecCCceEEEEEcccceeeEeeccchhhCC
Confidence 9999999999999999999994 88999999999999999999987 567999999999999877666665543
Q ss_pred ---CceeEEEecCCCEEEEEEc----CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC-------------CC----EE
Q 002591 750 ---GTAQMRFQPHLGRYLAAAA----ENVVSILDAETQACRLSLQGHTKPIDSVCWDPS-------------GE----LL 805 (903)
Q Consensus 750 ---~~~~v~~sp~~~~ll~~s~----dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd-------------g~----~l 805 (903)
....+.|+|+|.+|++... ...+.|++-.+.+.-..+-+|..++.++.|+|. .+ .+
T Consensus 218 ~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~ 297 (942)
T KOG0973|consen 218 LTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIA 297 (942)
T ss_pred CcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEE
Confidence 3456889999999998754 348999999999999999999999999999981 11 67
Q ss_pred EEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc
Q 002591 806 ASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK 867 (903)
Q Consensus 806 asgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~ 867 (903)
|+|+.| +|.||........-.++.+. ...|.+++|+|||..|++++.||+|.++.+.+++
T Consensus 298 AvgSqDrSlSVW~T~~~RPl~vi~~lf--~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 298 AVGSQDRSLSVWNTALPRPLFVIHNLF--NKSIVDMSWSPDGFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred EEecCCccEEEEecCCCCchhhhhhhh--cCceeeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence 888999 99999986654433334333 6689999999999999999999999999998754
No 82
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=5.4e-26 Score=250.30 Aligned_cols=268 Identities=22% Similarity=0.383 Sum_probs=231.9
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCc------eeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-ceeEEec
Q 002591 633 SDGKLLATGGHDKKAVLWHTDTLK------SKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG-YSLRTFM 705 (903)
Q Consensus 633 pdg~~Latgs~Dg~V~vWd~~t~~------~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~-~~~~~~~ 705 (903)
|.+++|+|||.||.|++|++.... ....++.|.+.|+++....+++.|+++|.|-+|++|+..... .++.++.
T Consensus 35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir 114 (735)
T KOG0308|consen 35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR 114 (735)
T ss_pred CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh
Confidence 466789999999999999976322 366788999999999999999999999999999999998754 7888999
Q ss_pred cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe--eeEEe------------ecCceeEEEecCCCEEEEEEcCCe
Q 002591 706 GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS--CTRVF------------KGGTAQMRFQPHLGRYLAAAAENV 771 (903)
Q Consensus 706 ~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~--~~~~~------------~~~~~~v~~sp~~~~ll~~s~dg~ 771 (903)
.|.+.|.|+++......++|+|+-|+.|++||++++. .+..+ +..+.+++..+.+..++.|+.++.
T Consensus 115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~ 194 (735)
T KOG0308|consen 115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD 194 (735)
T ss_pred cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc
Confidence 9999999999954556789999999999999999873 22222 234566778888888889999999
Q ss_pred EEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEE
Q 002591 772 VSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLL 850 (903)
Q Consensus 772 I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~ 850 (903)
+++||.++.+.+..+.+|+..|.++..++||..+++++.| +|++||+... +|+.++..|...|.++..+|+-.+++
T Consensus 195 lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ---rCl~T~~vH~e~VWaL~~~~sf~~vY 271 (735)
T KOG0308|consen 195 LRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ---RCLATYIVHKEGVWALQSSPSFTHVY 271 (735)
T ss_pred eEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc---ceeeeEEeccCceEEEeeCCCcceEE
Confidence 9999999999999999999999999999999999999999 9999999765 89999999999999999999999999
Q ss_pred EEECCCeEEEEECCC-CcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 851 VIGCYQSLELWNMSE-NKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 851 t~s~dg~I~vwdl~~-~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+|+.|+.|+.=|+++ .+...+...+.+|..+..+.+..-+-+++.|+.|+-|.
T Consensus 272 sG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~ 325 (735)
T KOG0308|consen 272 SGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWK 325 (735)
T ss_pred ecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecC
Confidence 999999999999998 44446667777888888876555557778899998884
No 83
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=6e-25 Score=236.00 Aligned_cols=237 Identities=22% Similarity=0.285 Sum_probs=204.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCcee
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP-RLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
.+.|++++|-.||++||+|...|.|+|||+++...++.+.+|..+|..+.|+|.+. .|++|++|+.+++||+.+ ....
T Consensus 68 k~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~-a~v~ 146 (487)
T KOG0310|consen 68 KDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST-AYVQ 146 (487)
T ss_pred ccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC-cEEE
Confidence 34699999999999999999999999999877778889999999999999999755 678888899999999998 5556
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC-eeeEEee--cCceeEEEecCCCEEEEEEcCCeEEEEECC
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG-SCTRVFK--GGTAQMRFQPHLGRYLAAAAENVVSILDAE 778 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~-~~~~~~~--~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~ 778 (903)
..+.+|++.|.|.+|+|-.+++++||+.||.|++||++.. ..+..+. .++..+.+.|.+..++++ ..+.|++||+.
T Consensus 147 ~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasA-gGn~vkVWDl~ 225 (487)
T KOG0310|consen 147 AELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASA-GGNSVKVWDLT 225 (487)
T ss_pred EEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEc-CCCeEEEEEec
Confidence 7899999999999999999999999999999999999987 5555554 367888999987766654 45789999999
Q ss_pred CC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC
Q 002591 779 TQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ 856 (903)
Q Consensus 779 t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg 856 (903)
+| +.+..+..|...|+|+++..++..|++++-| .|++||+.+. +.++.+.- .++|.+|+.+|++..+++|..+|
T Consensus 226 ~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~---Kvv~s~~~-~~pvLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 226 TGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY---KVVHSWKY-PGPVLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred CCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce---EEEEeeec-ccceeeEEecCCCceEEEecccc
Confidence 66 5555566699999999999999999999999 9999997654 56666554 78999999999999999999999
Q ss_pred eEEEEECCC
Q 002591 857 SLELWNMSE 865 (903)
Q Consensus 857 ~I~vwdl~~ 865 (903)
.+.+-+...
T Consensus 302 lv~~rr~~~ 310 (487)
T KOG0310|consen 302 LVSIRRREV 310 (487)
T ss_pred eeeeehhhc
Confidence 887765433
No 84
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.94 E-value=2.7e-25 Score=221.31 Aligned_cols=238 Identities=23% Similarity=0.392 Sum_probs=208.8
Q ss_pred EEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee--EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEE
Q 002591 659 TNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL--RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 736 (903)
Q Consensus 659 ~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~--~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iw 736 (903)
+.+.+|...|.+|+|+.+|.+|++|+.|+++.+|+++.. ... ....+|.+.|-.++|+|....++++++.|.+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~w 92 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIW 92 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-hhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEE
Confidence 556789999999999999999999999999999999863 222 34568999999999999999999999999999999
Q ss_pred EcCCCeeeEEee--cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEE-EEEeCCeE
Q 002591 737 SINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELL-ASVSEDSV 813 (903)
Q Consensus 737 Di~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~l-asgs~d~I 813 (903)
|++.++|+.... ++...+.|+|++++++++..|..|.++|.++.+.+...+ ....+..++|+.++++| ++.+.++|
T Consensus 93 d~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v 171 (313)
T KOG1407|consen 93 DIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCV 171 (313)
T ss_pred EeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCceE
Confidence 999999988765 456678999999999999999999999999998877655 55678889999877754 45555688
Q ss_pred EEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEE
Q 002591 814 RVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVAS 892 (903)
Q Consensus 814 ~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaS 892 (903)
.|..... .+.+..+..|.....+|.|+|+|++|++|+.|-.+.+||+.+--++ .+..++-+|+.|.|+.||++||+
T Consensus 172 ~ILsyps---Lkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lAS 248 (313)
T KOG1407|consen 172 EILSYPS---LKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLAS 248 (313)
T ss_pred EEEeccc---cccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeec
Confidence 8888764 4788889999999999999999999999999999999999988777 67789999999999999999999
Q ss_pred EecCCcEEE
Q 002591 893 ASHDKFVKL 901 (903)
Q Consensus 893 gs~DG~I~I 901 (903)
||+|..|-|
T Consensus 249 aSEDh~IDI 257 (313)
T KOG1407|consen 249 ASEDHFIDI 257 (313)
T ss_pred cCccceEEe
Confidence 999998865
No 85
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.94 E-value=8e-25 Score=241.83 Aligned_cols=347 Identities=14% Similarity=0.197 Sum_probs=263.8
Q ss_pred cCCCeeeeCCcchhhhhhccccccC-------------------CCCCceEEeeecCCC----CCcCCCCcccccccCcc
Q 002591 556 SPSNQLWDDKDLELRADMDRLVEDG-------------------SLDDNVESFLSHDDT----DPRDAGGRGMDVSQGFS 612 (903)
Q Consensus 556 ~~~~~lWd~~~~~~~~~~~~~~~~g-------------------s~d~~v~~~~~~d~~----~~~~~~~~~~d~~~~~~ 612 (903)
.+.++|++.++.+...++.+-.+-| -+.+.|...+.+... .-.|-..-+||+.+...
T Consensus 279 ~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~~k 358 (1080)
T KOG1408|consen 279 KGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDVNK 358 (1080)
T ss_pred cceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEecccccc
Confidence 5566888888877766665533322 122222222221111 01233456788887766
Q ss_pred eeeeeEeecCCCCeEEEEEcCC-----------CCEEEEEeCCCcEEEEECCCC---ceeEE------------------
Q 002591 613 FKEANSVRASTSKVICCHFSSD-----------GKLLATGGHDKKAVLWHTDTL---KSKTN------------------ 660 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspd-----------g~~Latgs~Dg~V~vWd~~t~---~~~~~------------------ 660 (903)
......+--|...|++|.--|. ...++|++.|++|+|||++.+ ...+.
T Consensus 359 vgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q 438 (1080)
T KOG1408|consen 359 VGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQ 438 (1080)
T ss_pred ccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchh
Confidence 6777777789999999887651 126889999999999998742 11110
Q ss_pred ----------------eccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCC--CCe
Q 002591 661 ----------------LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN--KDD 722 (903)
Q Consensus 661 ----------------l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~--~~~ 722 (903)
.-+....|.+|+.+|++.+||+|..-|+|+|||+.+ ......+..|...|.|+.|+.. +..
T Consensus 439 ~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~-l~~~~~~eAHesEilcLeyS~p~~~~k 517 (1080)
T KOG1408|consen 439 IMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQE-LEYTCFMEAHESEILCLEYSFPVLTNK 517 (1080)
T ss_pred hhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehh-hhhhhheecccceeEEEeecCchhhhH
Confidence 001345699999999999999999999999999987 5566778899999999999753 456
Q ss_pred EEEEEeCCCcEEEEEcCCC-eeeEEeec---CceeEEEecCC--CEEEEEEcCCeEEEEECCCCeEEEEecC-----CCC
Q 002591 723 LICSCDGDGEIRYWSINNG-SCTRVFKG---GTAQMRFQPHL--GRYLAAAAENVVSILDAETQACRLSLQG-----HTK 791 (903)
Q Consensus 723 ll~sgs~Dg~I~iwDi~t~-~~~~~~~~---~~~~v~~sp~~--~~ll~~s~dg~I~i~D~~t~~~~~~l~~-----h~~ 791 (903)
+|++++.|..|.|||+... ..+.++.+ .++.+.|...+ ...++++.|..|.+--.........+.. ...
T Consensus 518 LLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~kt 597 (1080)
T KOG1408|consen 518 LLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKT 597 (1080)
T ss_pred hhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccc
Confidence 8999999999999999754 34455544 46778888877 5788888888776543332211112221 234
Q ss_pred CeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-
Q 002591 792 PIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM- 869 (903)
Q Consensus 792 ~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~- 869 (903)
.+..++..|..+++++++.| .|+|||+.+++..+.++.-..|++....+...|.|.||++.+.|+++.|||+.+++++
T Consensus 598 TlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA 677 (1080)
T KOG1408|consen 598 TLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVA 677 (1080)
T ss_pred eEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhh
Confidence 68899999999999999999 9999999999776777766778888999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 870 TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 870 ~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
...+|...|+.+.|.+|.+.|++.+.||+|.||+
T Consensus 678 ~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~ 711 (1080)
T KOG1408|consen 678 QMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWK 711 (1080)
T ss_pred hhcCcchheeeeeecccchhheeecCCceEEEEE
Confidence 8899999999999999999999999999999996
No 86
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=4.5e-25 Score=251.48 Aligned_cols=244 Identities=19% Similarity=0.317 Sum_probs=197.8
Q ss_pred eeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC--------------------------------C------
Q 002591 657 SKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN--------------------------------P------ 697 (903)
Q Consensus 657 ~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~--------------------------------~------ 697 (903)
....+. .|.+.|+++.|++||+|||+||.|+.|+||.+.. .
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s 337 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS 337 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence 334455 8999999999999999999999999999997754 0
Q ss_pred ---------------------CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec--CceeE
Q 002591 698 ---------------------GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG--GTAQM 754 (903)
Q Consensus 698 ---------------------~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~--~~~~v 754 (903)
.++++.|.||.+.|.+|.|+.++ +|++++.|.+||+|++....|+++|.. -++|+
T Consensus 338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~--fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcV 415 (712)
T KOG0283|consen 338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN--FLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCV 415 (712)
T ss_pred ccccccCCccccCCCccccccccchhhhhccchhheecccccCC--eeEeccccccEEeecCCCcceeeEEecCCeeEEE
Confidence 01245667999999999999763 667999999999999999999999864 58999
Q ss_pred EEecCC-CEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEe--
Q 002591 755 RFQPHL-GRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHEL-- 830 (903)
Q Consensus 755 ~~sp~~-~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~-- 830 (903)
+|+|.+ ++|++|+-|+.|+||++...+.+.-...+ .-|+++||.|||++.++|+.+ .+++|+....+........
T Consensus 416 aFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~ 494 (712)
T KOG0283|consen 416 AFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLR-DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLH 494 (712)
T ss_pred EecccCCCcEeecccccceEEeecCcCeeEeehhhh-hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeec
Confidence 999966 78888999999999999988877765544 889999999999999999998 9999998765221111111
Q ss_pred ---ecCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCCCcEE-EEccCC--CCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 831 ---SCNGNKFHSCVFHPTY-PSLLVIGCYQSLELWNMSENKTM-TLTAHE--GLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 831 ---~~~~~~i~si~~sp~g-~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~--~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+.....|+.+.|.|.. ..+++.+.|..|+|||.++..++ .+.++. ..-....|+.||++|+++++|..|+||+
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~ 574 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWK 574 (712)
T ss_pred cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEe
Confidence 1112379999999754 35999999999999999888877 555443 2345668888999999999999999996
No 87
>PTZ00421 coronin; Provisional
Probab=99.93 E-value=1e-23 Score=243.63 Aligned_cols=224 Identities=17% Similarity=0.263 Sum_probs=181.0
Q ss_pred eEeecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC-------ceeEEeccCCCCeEEEEECCCC-CEEEEEeCCC
Q 002591 617 NSVRASTSKVICCHFSS-DGKLLATGGHDKKAVLWHTDTL-------KSKTNLEEHSSLITDVRFSPSM-PRLATSSFDK 687 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fsp-dg~~Latgs~Dg~V~vWd~~t~-------~~~~~l~~h~~~V~~l~fspdg-~~Lasgs~Dg 687 (903)
..+.+|.+.|++++|+| ++.+||+|+.|++|+|||+.++ ..+..+.+|...|.+|+|+|++ .+|++++.|+
T Consensus 69 ~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg 148 (493)
T PTZ00421 69 PILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM 148 (493)
T ss_pred ceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC
Confidence 34789999999999999 8899999999999999998754 3567889999999999999985 6999999999
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCc----eeEEEecCCCEE
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGT----AQMRFQPHLGRY 763 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~----~~v~~sp~~~~l 763 (903)
+|+|||+.+ +..+..+.+|...|.+++|+|++. +|++++.|+.|+|||+++++.+..+..+. ..+.|.++++.+
T Consensus 149 tVrIWDl~t-g~~~~~l~~h~~~V~sla~spdG~-lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~i 226 (493)
T PTZ00421 149 VVNVWDVER-GKAVEVIKCHSDQITSLEWNLDGS-LLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLI 226 (493)
T ss_pred EEEEEECCC-CeEEEEEcCCCCceEEEEEECCCC-EEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeE
Confidence 999999997 677888999999999999999976 66799999999999999999887776542 356788888888
Q ss_pred EEEE----cCCeEEEEECCCCe-EEEEecCC-CCCeEEEEEcCCCCEEEEEeC-C-eEEEEECCCCCCcceEEEee-cCC
Q 002591 764 LAAA----AENVVSILDAETQA-CRLSLQGH-TKPIDSVCWDPSGELLASVSE-D-SVRVWTVGSGSEGECVHELS-CNG 834 (903)
Q Consensus 764 l~~s----~dg~I~i~D~~t~~-~~~~l~~h-~~~V~sl~~spdg~~lasgs~-d-~I~iwdl~s~~~~~~i~~~~-~~~ 834 (903)
++++ .|+.|++||+++.. ++..+..+ ...+....|++++++|++++. | .|++||+.++. .+.... .+.
T Consensus 227 vt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~---~~~~~~~~s~ 303 (493)
T PTZ00421 227 ITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER---LTFCSSYSSV 303 (493)
T ss_pred EEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc---eEEEeeccCC
Confidence 8765 37899999999764 33333323 345666789999998888773 5 99999998764 222222 234
Q ss_pred CceEEEEEeCC
Q 002591 835 NKFHSCVFHPT 845 (903)
Q Consensus 835 ~~i~si~~sp~ 845 (903)
..+..++|.|.
T Consensus 304 ~~~~g~~~~pk 314 (493)
T PTZ00421 304 EPHKGLCMMPK 314 (493)
T ss_pred CCCcceEeccc
Confidence 45677778775
No 88
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=4.3e-24 Score=217.95 Aligned_cols=269 Identities=18% Similarity=0.266 Sum_probs=215.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
-.+.|.+|.|++.+..|++++.||++++||+........+ .|..++.+++|.+ ...+++|+.||.|+.+|+.+ + ..
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~-~-~~ 87 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNT-G-NE 87 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecC-C-cc
Confidence 3678999999999999999999999999999876444444 5889999999987 46899999999999999997 3 34
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCe
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQA 781 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~ 781 (903)
..+-.|...|.||.+.+..+ .+++|+.|++|++||.+...+...+.......+.+-.++.|++|+.+..|.+||+++..
T Consensus 88 ~~igth~~~i~ci~~~~~~~-~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r~v~iyDLRn~~ 166 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVG-CVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLVVGTSDRKVLIYDLRNLD 166 (323)
T ss_pred eeeccCCCceEEEEeeccCC-eEEEcccCccEEEEeccccccccccccCceEEEEeccCCEEEEeecCceEEEEEccccc
Confidence 55667999999999998755 45599999999999999877777776666677788889999999999999999999876
Q ss_pred EEEEec--CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC-CCcceEEEeecCC---------CceEEEEEeCCCCE
Q 002591 782 CRLSLQ--GHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG-SEGECVHELSCNG---------NKFHSCVFHPTYPS 848 (903)
Q Consensus 782 ~~~~l~--~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~-~~~~~i~~~~~~~---------~~i~si~~sp~g~~ 848 (903)
...... .-+-.+.||++-|++.-+++++-+ .|.+=.+... ........+++|. .+|++++|||-...
T Consensus 167 ~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~t 246 (323)
T KOG1036|consen 167 EPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGT 246 (323)
T ss_pred chhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccce
Confidence 554332 234568999999988755555555 5554444332 1112233444442 36899999999999
Q ss_pred EEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEec
Q 002591 849 LLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASH 895 (903)
Q Consensus 849 l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~ 895 (903)
|++|+.||.|.+||+.+.+.+ .+...+..|.+++|+.+|..||+|+.
T Consensus 247 faTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 247 FATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 999999999999999998877 66667788999999999999999874
No 89
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.93 E-value=1.8e-23 Score=236.25 Aligned_cols=346 Identities=15% Similarity=0.204 Sum_probs=250.1
Q ss_pred cCCCeeeeCCcchhhhhhccccccCCCCCceEEeeecCC---CCCcCCCCcccccccCcceeeeeEeecCCCCeEEEEEc
Q 002591 556 SPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDD---TDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFS 632 (903)
Q Consensus 556 ~~~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~~~~d~---~~~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fs 632 (903)
++.+.+|+..++......+......+.+. +.+.+-+.. ..........+.+++-.+-+.+.+++++.+.|++|.=+
T Consensus 133 ~~~l~vw~~s~~~~e~~l~~~~~~~~~~~-Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqs 211 (910)
T KOG1539|consen 133 SNILFVWKTSSIQEELYLQSTFLKVEGDF-ITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQS 211 (910)
T ss_pred cCcEEEEEeccccccccccceeeeccCCc-eeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccC
Confidence 55668899887522112222222222332 444433322 11111122223333333668999999999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCceeEEeccCCCce
Q 002591 633 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTVRVWDADNPGYSLRTFMGHSASV 711 (903)
Q Consensus 633 pdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~-Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V 711 (903)
|-=..+|.|..+|+|.|++++.++.+.+|+..-+.|+.++|.-||.. +++|+..|.+.+||++...........|.+.|
T Consensus 212 PaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv 291 (910)
T KOG1539|consen 212 PALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSV 291 (910)
T ss_pred CcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCc
Confidence 98889999999999999999999999999877799999999999985 56677789999999986332222222444444
Q ss_pred EEEEecCC----------------------------------------------CCeEEEEEeCCCcEEEEEcCC-----
Q 002591 712 MSLDFHPN----------------------------------------------KDDLICSCDGDGEIRYWSINN----- 740 (903)
Q Consensus 712 ~sl~fsp~----------------------------------------------~~~ll~sgs~Dg~I~iwDi~t----- 740 (903)
..+.|.+. ..+.+.+++.|++.+.+++..
T Consensus 292 ~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~ 371 (910)
T KOG1539|consen 292 TGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQ 371 (910)
T ss_pred ccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhH
Confidence 44444443 233333444444333333210
Q ss_pred ------------------------------------------------------------Cee-eEEe--------ecCc
Q 002591 741 ------------------------------------------------------------GSC-TRVF--------KGGT 751 (903)
Q Consensus 741 ------------------------------------------------------------~~~-~~~~--------~~~~ 751 (903)
... ..++ ...+
T Consensus 372 ~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~ 451 (910)
T KOG1539|consen 372 ELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINA 451 (910)
T ss_pred hhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcce
Confidence 000 0000 0123
Q ss_pred eeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEe---cCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC-----
Q 002591 752 AQMRFQPHLGRYLAAAAENVVSILDAETQACRLSL---QGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGS----- 822 (903)
Q Consensus 752 ~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l---~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~----- 822 (903)
.+++.++.|++.+.|.+.|.|.+|++.+|-....+ ..|..+|+.++.+.-++.+++++.+ -+++||+....
T Consensus 452 ~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l 531 (910)
T KOG1539|consen 452 TAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSL 531 (910)
T ss_pred EEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeee
Confidence 45778888899999999999999999999888888 4799999999999988888888887 89999987652
Q ss_pred ---------------------------------CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 823 ---------------------------------EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 823 ---------------------------------~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
..+.++.+.+|.+.|++++|+|||++|++++.|++|++||+.++.++
T Consensus 532 ~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lI 611 (910)
T KOG1539|consen 532 RLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLI 611 (910)
T ss_pred ccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCccee
Confidence 01223455678999999999999999999999999999999999999
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEecC-CcEEEc
Q 002591 870 TLTAHEGLIAALAVSTETGYVASASHD-KFVKLW 902 (903)
Q Consensus 870 ~~~~h~~~V~sl~~spdg~~LaSgs~D-G~I~IW 902 (903)
-...-+.+++++.|+|+|.+|||+..| .-|++|
T Consensus 612 D~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 612 DGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred eeEecCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence 877888999999999999999999998 679999
No 90
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.93 E-value=4.7e-24 Score=238.00 Aligned_cols=237 Identities=19% Similarity=0.309 Sum_probs=206.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEecc-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~-h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
.+.|+++.|+++|.+||+|..+|.|.|||..+.+.+..+.+ |...|-+++|. +..+.+|+.|+.|.++|++......
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~ 294 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV 294 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence 77899999999999999999999999999999999999998 99999999998 6689999999999999999865555
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe---ecCceeEEEecCCCEEEEEE---cCCeEEEE
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF---KGGTAQMRFQPHLGRYLAAA---AENVVSIL 775 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~---~~~~~~v~~sp~~~~ll~~s---~dg~I~i~ 775 (903)
.++.+|...|..+.|++++. ++|+|+.|+.|.|||.........+ ...+..++|+|....+++.+ .|+.|++|
T Consensus 295 ~~~~~H~qeVCgLkws~d~~-~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fw 373 (484)
T KOG0305|consen 295 STLQGHRQEVCGLKWSPDGN-QLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFW 373 (484)
T ss_pred hhhhcccceeeeeEECCCCC-eeccCCCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEE
Confidence 66889999999999999976 6679999999999999666655544 45678899999986655543 38999999
Q ss_pred ECCCCeEEEEecCCCCCeEEEEEcCCCCEEE-EEeCC--eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEE
Q 002591 776 DAETQACRLSLQGHTKPIDSVCWDPSGELLA-SVSED--SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVI 852 (903)
Q Consensus 776 D~~t~~~~~~l~~h~~~V~sl~~spdg~~la-sgs~d--~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~ 852 (903)
|..+++.+..+. ....|.+|.|++..+-|+ +.+.. .|.||++.+. +.+..+.+|...|..++++|||..|+++
T Consensus 374 n~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~---~~~~~l~gH~~RVl~la~SPdg~~i~t~ 449 (484)
T KOG0305|consen 374 NTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSM---KLVAELLGHTSRVLYLALSPDGETIVTG 449 (484)
T ss_pred EcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEecccc---ceeeeecCCcceeEEEEECCCCCEEEEe
Confidence 999999988776 467899999999887444 44433 8999999874 7888999999999999999999999999
Q ss_pred ECCCeEEEEECCCC
Q 002591 853 GCYQSLELWNMSEN 866 (903)
Q Consensus 853 s~dg~I~vwdl~~~ 866 (903)
+.|.++++|++-..
T Consensus 450 a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 450 AADETLRFWNLFDE 463 (484)
T ss_pred cccCcEEeccccCC
Confidence 99999999998764
No 91
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.93 E-value=5.2e-25 Score=231.58 Aligned_cols=241 Identities=23% Similarity=0.421 Sum_probs=210.4
Q ss_pred eeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 002591 613 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 692 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IW 692 (903)
...+.++.+..+.|+++.|.++++++++++.|+.+++|+++......++.+|.+.|+++.|......+++|+.|.+|++|
T Consensus 209 ~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~W 288 (459)
T KOG0288|consen 209 SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLW 288 (459)
T ss_pred hhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhh
Confidence 45778899999999999999999999999999999999999999999999999999999999888789999999999999
Q ss_pred eCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcCC
Q 002591 693 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAEN 770 (903)
Q Consensus 693 Dl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~dg 770 (903)
|+.. ..|.+++. ....+.+|+.. ...+++|-.|+.|++||+++..++.... +.+.++..+.++..+++++.|+
T Consensus 289 Dl~k-~~C~kt~l-~~S~cnDI~~~---~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDd 363 (459)
T KOG0288|consen 289 DLQK-AYCSKTVL-PGSQCNDIVCS---ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDD 363 (459)
T ss_pred hhhh-hheecccc-ccccccceEec---ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCC
Confidence 9997 77777665 34556667665 2356689999999999999999888776 4578899999999999999999
Q ss_pred eEEEEECCCCeEEEEecCC----CCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCC--ceEEEEEe
Q 002591 771 VVSILDAETQACRLSLQGH----TKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGN--KFHSCVFH 843 (903)
Q Consensus 771 ~I~i~D~~t~~~~~~l~~h----~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~--~i~si~~s 843 (903)
++.++|+++......+... ...++.++|+|++.|+++|+.| .|+||++.++ ++...+..... .|++++|+
T Consensus 364 tl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tg---KlE~~l~~s~s~~aI~s~~W~ 440 (459)
T KOG0288|consen 364 TLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTG---KLEKVLSLSTSNAAITSLSWN 440 (459)
T ss_pred ceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCc---eEEEEeccCCCCcceEEEEEc
Confidence 9999999999888877642 2348889999999999999999 9999999987 45544444333 59999999
Q ss_pred CCCCEEEEEECCCeEEEE
Q 002591 844 PTYPSLLVIGCYQSLELW 861 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vw 861 (903)
|.|.++++++.++.+.+|
T Consensus 441 ~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 441 PSGSGLLSADKQKAVTLW 458 (459)
T ss_pred CCCchhhcccCCcceEec
Confidence 999999999999999999
No 92
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=5e-24 Score=217.19 Aligned_cols=283 Identities=20% Similarity=0.290 Sum_probs=213.6
Q ss_pred eeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCce--eEEec--cCCCCeEEEEECCCCCEEEEEe-CCCcEE
Q 002591 616 ANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS--KTNLE--EHSSLITDVRFSPSMPRLATSS-FDKTVR 690 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~--~~~l~--~h~~~V~~l~fspdg~~Lasgs-~Dg~I~ 690 (903)
+..+++|.+.|+|++|+.||++|||++.|++|+||+++.... .+.++ ..-+.-+.++|.||.+-+++.. ...+++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 456899999999999999999999999999999999985322 11221 1223568899999988665554 456799
Q ss_pred EEeCCCC--Cc-ee--------EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEE
Q 002591 691 VWDADNP--GY-SL--------RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRF 756 (903)
Q Consensus 691 IWDl~~~--~~-~~--------~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~ 756 (903)
+|.+... +. .. ..-..|.-.|..+-.... ..+|++|+.|..|.+|+++ |..+..+.. .....+.
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~-~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGN-AKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCC-ceEEEEecCCCcEEEEecC-Cceeeeeccccccccceee
Confidence 9977531 11 11 111235556666665544 4577799999999999999 887777654 3456889
Q ss_pred ecCCCEEEEEEcCCeEEEEECC---CC-----eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC----CC
Q 002591 757 QPHLGRYLAAAAENVVSILDAE---TQ-----ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG----SE 823 (903)
Q Consensus 757 sp~~~~ll~~s~dg~I~i~D~~---t~-----~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~----~~ 823 (903)
+|+|.++++++..-.|++|++- .| +.+..+++|...|..++|+++...+++.+.| +++|||+.-. ..
T Consensus 237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qD 316 (420)
T KOG2096|consen 237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQD 316 (420)
T ss_pred CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCC
Confidence 9999999999999999999753 22 3567889999999999999999999999999 9999998642 22
Q ss_pred cceEEEe----ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecCC
Q 002591 824 GECVHEL----SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHDK 897 (903)
Q Consensus 824 ~~~i~~~----~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG 897 (903)
.+.+++. ...+.....+..+|+|..|+++ ....|++|..++++.. ....|...|.+++|+++|++++|++ |.
T Consensus 317 pk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s-~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr 394 (420)
T KOG2096|consen 317 PKILKEGSAPLHAAGSEPVRLELSPSGDSLAVS-FGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DR 394 (420)
T ss_pred chHhhcCCcchhhcCCCceEEEeCCCCcEEEee-cCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ce
Confidence 2333322 2223445588999999966664 4558999999998877 3457999999999999999999997 66
Q ss_pred cEEEc
Q 002591 898 FVKLW 902 (903)
Q Consensus 898 ~I~IW 902 (903)
.++++
T Consensus 395 ~vrv~ 399 (420)
T KOG2096|consen 395 YVRVI 399 (420)
T ss_pred eeeee
Confidence 67664
No 93
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.93 E-value=7.7e-25 Score=222.13 Aligned_cols=248 Identities=14% Similarity=0.235 Sum_probs=206.9
Q ss_pred eeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec--cCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 002591 613 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE--EHSSLITDVRFSPSMPRLATSSFDKTVR 690 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~--~h~~~V~~l~fspdg~~Lasgs~Dg~I~ 690 (903)
...+++|-.|.+.|+++.|+|....|++|+.|++|++||+.+....+.++ ....+|.+|.|+|.|.+|++|..--+++
T Consensus 162 hPvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~r 241 (430)
T KOG0640|consen 162 HPVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLR 241 (430)
T ss_pred CceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCcee
Confidence 35678889999999999999999999999999999999998654444443 3567899999999999999999999999
Q ss_pred EEeCCCCCceeEEe---ccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec-----CceeEEEecCCCE
Q 002591 691 VWDADNPGYSLRTF---MGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG-----GTAQMRFQPHLGR 762 (903)
Q Consensus 691 IWDl~~~~~~~~~~---~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-----~~~~v~~sp~~~~ 762 (903)
+||+++ ..+...- ..|++.|+++.+++.+. +.++++.||.|+|||--+++|++++.. .+.+..|..++++
T Consensus 242 lYdv~T-~QcfvsanPd~qht~ai~~V~Ys~t~~-lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~ky 319 (430)
T KOG0640|consen 242 LYDVNT-YQCFVSANPDDQHTGAITQVRYSSTGS-LYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKY 319 (430)
T ss_pred EEeccc-eeEeeecCcccccccceeEEEecCCcc-EEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeE
Confidence 999998 4444322 36999999999999976 566999999999999999999988853 3556779999999
Q ss_pred EEEEEcCCeEEEEECCCCeEEEEecCCC--C---CeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEeecCCC
Q 002591 763 YLAAAAENVVSILDAETQACRLSLQGHT--K---PIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGECVHELSCNGN 835 (903)
Q Consensus 763 ll~~s~dg~I~i~D~~t~~~~~~l~~h~--~---~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~~~~~~ 835 (903)
+++.+.|..|++|++.+++++.++.+.. + --+...|+....|++.-.+. .++-||.++...... .-.+|.+
T Consensus 320 iLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l--~slgHn~ 397 (430)
T KOG0640|consen 320 ILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVAL--LSLGHNG 397 (430)
T ss_pred EeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhh--cccCCCC
Confidence 9999999999999999999999887641 1 23345688888888877766 799999998754322 2346889
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 836 KFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 836 ~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
.+..+.-+|.+..+++|+.|..+++|--+
T Consensus 398 a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 398 AVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred CceEEEeCCCCCceeeecccceeeeeeec
Confidence 99999999999999999999999999643
No 94
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=7e-24 Score=216.47 Aligned_cols=257 Identities=21% Similarity=0.379 Sum_probs=209.7
Q ss_pred EEEEEeCCCcEEEEECCC------------CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEe
Q 002591 637 LLATGGHDKKAVLWHTDT------------LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTF 704 (903)
Q Consensus 637 ~Latgs~Dg~V~vWd~~t------------~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~ 704 (903)
.|++|++...|.-+++.. ...+..+..|.+.|++|+.+ +.++|+|+.|-+|+|||+.. ...+..+
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k-~~qlg~l 79 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRK-RKQLGIL 79 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccc-hhhhcce
Confidence 467788877777676542 12355677899999999985 78999999999999999997 6677888
Q ss_pred ccCCCceEEEEecCCCC--eEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEEcCCeEEEEECCC
Q 002591 705 MGHSASVMSLDFHPNKD--DLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAAAENVVSILDAET 779 (903)
Q Consensus 705 ~~h~~~V~sl~fsp~~~--~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t 779 (903)
..|.+.|+++.|.+.-. ++| +|++||.|.+|++....++..++. .++.++++|.++.-++.+.|+.+++|++-+
T Consensus 80 l~HagsitaL~F~~~~S~shLl-S~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~ 158 (362)
T KOG0294|consen 80 LSHAGSITALKFYPPLSKSHLL-SGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVR 158 (362)
T ss_pred eccccceEEEEecCCcchhhee-eecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhc
Confidence 88999999999988743 455 999999999999999988888765 478899999999999999999999999999
Q ss_pred CeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEE
Q 002591 780 QACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLE 859 (903)
Q Consensus 780 ~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~ 859 (903)
|+.-+.+.- ...-+.|.|+|.|.+|+.+..+.|-||.+.+... ..++.. ...+.++.|- ++.+|++|+.|+.|.
T Consensus 159 Gr~a~v~~L-~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v---~~~i~~-~~r~l~~~~l-~~~~L~vG~d~~~i~ 232 (362)
T KOG0294|consen 159 GRVAFVLNL-KNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASV---FREIEN-PKRILCATFL-DGSELLVGGDNEWIS 232 (362)
T ss_pred Cccceeecc-CCcceeeEEcCCCCEEEEEeccEEEEEecccHhH---hhhhhc-cccceeeeec-CCceEEEecCCceEE
Confidence 876665542 2233459999999999999999999999976522 222211 2345555554 667899999999999
Q ss_pred EEECCCCcEE-EEccCCCCEEEEEE--ecCCCEEEEEecCCcEEEcC
Q 002591 860 LWNMSENKTM-TLTAHEGLIAALAV--STETGYVASASHDKFVKLWK 903 (903)
Q Consensus 860 vwdl~~~~~~-~~~~h~~~V~sl~~--spdg~~LaSgs~DG~I~IWd 903 (903)
+||.+...+. .+.+|+..|.++.+ .|++.||+|+|.||.|+|||
T Consensus 233 ~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd 279 (362)
T KOG0294|consen 233 LKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWD 279 (362)
T ss_pred EeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEE
Confidence 9999987776 78899999999985 46788999999999999997
No 95
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.93 E-value=4.7e-24 Score=236.88 Aligned_cols=274 Identities=18% Similarity=0.315 Sum_probs=227.3
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCce--eEEeccCCCCeEE-EEECC-CCCEEEEEeCCC
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS--KTNLEEHSSLITD-VRFSP-SMPRLATSSFDK 687 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~--~~~l~~h~~~V~~-l~fsp-dg~~Lasgs~Dg 687 (903)
.++..+.+++|...|..|++.+.. .+++++.||+++||+-..... ...+.+|.+.|.+ ++|-+ ++-.|++|+.|+
T Consensus 3 ~Y~ls~~l~gH~~DVr~v~~~~~~-~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~ 81 (745)
T KOG0301|consen 3 QYKLSHELEGHKSDVRAVAVTDGV-CIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT 81 (745)
T ss_pred cceeEEEeccCccchheeEecCCe-EEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccc
Confidence 456678899999999999876554 899999999999999653332 3457788888888 88886 444699999999
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCCCEEE
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHLGRYL 764 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll 764 (903)
+|.+|.+.. ..++.++.+|...|+|+....++. +++|+.|.++++|.+. ++...+.+| +-.+...|.+ .++
T Consensus 82 ~i~v~~~~~-~~P~~~LkgH~snVC~ls~~~~~~--~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e~-~~v 155 (745)
T KOG0301|consen 82 TIIVFKLSQ-AEPLYTLKGHKSNVCSLSIGEDGT--LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPEN-TYV 155 (745)
T ss_pred eEEEEecCC-CCchhhhhccccceeeeecCCcCc--eEecccccceEEecch--hhhcccCCcchheeeeeecCCC-cEE
Confidence 999999987 788999999999999999876654 5699999999999764 444445554 4556677776 999
Q ss_pred EEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEe
Q 002591 765 AAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFH 843 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s 843 (903)
+|+.|.+|++|.. ++++.+|.+|.+.|+.+++-+++.++ +++.| .|++|++ ++ .++.++.+|.+.++++...
T Consensus 156 TgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~fl-ScsNDg~Ir~w~~-~g---e~l~~~~ghtn~vYsis~~ 228 (745)
T KOG0301|consen 156 TGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFL-SCSNDGSIRLWDL-DG---EVLLEMHGHTNFVYSISMA 228 (745)
T ss_pred eccCcceeeeccC--CchhhhhccchhheeeeEEecCCCeE-eecCCceEEEEec-cC---ceeeeeeccceEEEEEEec
Confidence 9999999999987 78889999999999999999876555 55555 9999999 33 7899999999999999988
Q ss_pred CCCCEEEEEECCCeEEEEECCCCcEEEEccCCC-CEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 844 PTYPSLLVIGCYQSLELWNMSENKTMTLTAHEG-LIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~-~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
.++..|++++.|++++||+.. ++.....|.. .|+++++-++|. |++|++||.||||
T Consensus 229 ~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVf 285 (745)
T KOG0301|consen 229 LSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVF 285 (745)
T ss_pred CCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEE
Confidence 888899999999999999987 5554444544 899999988887 6778889999998
No 96
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.93 E-value=5.7e-24 Score=226.80 Aligned_cols=274 Identities=20% Similarity=0.266 Sum_probs=220.8
Q ss_pred eeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeE----E-------------e-ccCCCCeEEEEECCCC
Q 002591 616 ANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKT----N-------------L-EEHSSLITDVRFSPSM 677 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~----~-------------l-~~h~~~V~~l~fspdg 677 (903)
+..+..|.-+|+||++++|.+++++++.|++|.-|++.+++..+ + - +.|...|.+++.++|+
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 56778899999999999999999999999999999988776431 1 1 2688899999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeE
Q 002591 678 PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQM 754 (903)
Q Consensus 678 ~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v 754 (903)
+|||+|+.|..|.||+.++ ...+..+.+|.+.|.+++|-.....+ ++++.|+.|++|++.....+.++-++ +..+
T Consensus 215 kylatgg~d~~v~Iw~~~t-~ehv~~~~ghr~~V~~L~fr~gt~~l-ys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~I 292 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDT-LEHVKVFKGHRGAVSSLAFRKGTSEL-YSASADRSVKVWSIDQLSYVETLYGHQDGVLGI 292 (479)
T ss_pred cEEEecCCCceEEEecCcc-cchhhcccccccceeeeeeecCccce-eeeecCCceEEEehhHhHHHHHHhCCccceeee
Confidence 9999999999999999998 77889999999999999998765555 49999999999999988777666554 4455
Q ss_pred EEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEee--
Q 002591 755 RFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELS-- 831 (903)
Q Consensus 755 ~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~-- 831 (903)
........+-+++.|.++++|++. .+....+.+|.+.+.|++|-. ...|++|+++ .|.+|++-..+..-......
T Consensus 293 daL~reR~vtVGgrDrT~rlwKi~-eesqlifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv 370 (479)
T KOG0299|consen 293 DALSRERCVTVGGRDRTVRLWKIP-EESQLIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGV 370 (479)
T ss_pred chhcccceEEeccccceeEEEecc-ccceeeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeecccCceeEeeccccc
Confidence 555666666677799999999994 344456778999999999986 4567788888 99999997653211111100
Q ss_pred -------cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc----EEEEccCCCCEEEEEEecCCCEEEEE
Q 002591 832 -------CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK----TMTLTAHEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 832 -------~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~----~~~~~~h~~~V~sl~~spdg~~LaSg 893 (903)
.+...|++++..|..+.+++|+.+|.|++|-+.++- ++.-..-.+.|++|+|+++|++|++|
T Consensus 371 ~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 371 IPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred cCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEe
Confidence 112378999999999999999999999999999882 23333467899999999999966665
No 97
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=1.4e-22 Score=197.29 Aligned_cols=246 Identities=19% Similarity=0.345 Sum_probs=207.5
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-----eeEEeccCCCCeEEEEECCC----CCEEEEEeC
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK-----SKTNLEEHSSLITDVRFSPS----MPRLATSSF 685 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~-----~~~~l~~h~~~V~~l~fspd----g~~Lasgs~ 685 (903)
..+.-+.|.+.|+|.+|+|+|.+||+|+.|++|++.-+.... ....|.-|.+.|.+++|-.+ +.+|++++.
T Consensus 81 ~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~ga 160 (350)
T KOG0641|consen 81 LCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGA 160 (350)
T ss_pred EeeeccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCC
Confidence 334456799999999999999999999999999998665322 23457789999999999653 457777764
Q ss_pred -CCcEEEEeCCCCCceeEEeccCCCceEEEE-ecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----------Ccee
Q 002591 686 -DKTVRVWDADNPGYSLRTFMGHSASVMSLD-FHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----------GTAQ 753 (903)
Q Consensus 686 -Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~-fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----------~~~~ 753 (903)
|..|++-|... +..+..+.+|++.|.++- |+ +.++++|+.|.+|++||++-..|+.++.. .+..
T Consensus 161 gdc~iy~tdc~~-g~~~~a~sghtghilalyswn---~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaa 236 (350)
T KOG0641|consen 161 GDCKIYITDCGR-GQGFHALSGHTGHILALYSWN---GAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAA 236 (350)
T ss_pred CcceEEEeecCC-CCcceeecCCcccEEEEEEec---CcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEE
Confidence 78888889887 778999999999998763 43 45888999999999999999998887632 3567
Q ss_pred EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC-CCcceEEEee
Q 002591 754 MRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG-SEGECVHELS 831 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~-~~~~~i~~~~ 831 (903)
+++.|.+..++++-.|....+||++.++.+..+..|...|.|+.|+|...|+.+++.| .|++-|+... .....+....
T Consensus 237 v~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ 316 (350)
T KOG0641|consen 237 VAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVA 316 (350)
T ss_pred EEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEE
Confidence 8899999999999999999999999999999999999999999999999999999999 9999998643 1123445556
Q ss_pred cCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 832 CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 832 ~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
.|...+..|.|+|..-.+++.+.|+++.+|-+.
T Consensus 317 ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 317 EHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred eccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 678899999999999999999999999999764
No 98
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.92 E-value=2e-22 Score=219.94 Aligned_cols=261 Identities=13% Similarity=0.115 Sum_probs=204.1
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCceeEEeccCCCceEEE
Q 002591 636 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL-ATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 714 (903)
Q Consensus 636 ~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~L-asgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl 714 (903)
.++++++.|+.|++||+.+++.+..+..+.. +.+++|+|+++.+ ++++.++.|++||+.+ +..+..+..+.. +..+
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~-~~~~ 78 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLAT-GEVIGTLPSGPD-PELF 78 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCC-CcEEEeccCCCC-ccEE
Confidence 5788999999999999999998888876654 7789999999976 5667789999999987 555565654443 5678
Q ss_pred EecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEcCC-eEEEEECCCCeEEEEecCCCC
Q 002591 715 DFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAAEN-VVSILDAETQACRLSLQGHTK 791 (903)
Q Consensus 715 ~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~dg-~I~i~D~~t~~~~~~l~~h~~ 791 (903)
+|+|+++.++++++.|+.|++||+++.+.+..+.. ....++|+|++..++++..++ .+.+||.++++.+..+.. ..
T Consensus 79 ~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~ 157 (300)
T TIGR03866 79 ALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQ 157 (300)
T ss_pred EECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CC
Confidence 99999887777777899999999999888777753 356789999999998888765 577889998877665542 33
Q ss_pred CeEEEEEcCCCCEEEEEe-CC-eEEEEECCCCCCcceEEEeecC-------CCceEEEEEeCCCCEEEEE-ECCCeEEEE
Q 002591 792 PIDSVCWDPSGELLASVS-ED-SVRVWTVGSGSEGECVHELSCN-------GNKFHSCVFHPTYPSLLVI-GCYQSLELW 861 (903)
Q Consensus 792 ~V~sl~~spdg~~lasgs-~d-~I~iwdl~s~~~~~~i~~~~~~-------~~~i~si~~sp~g~~l~t~-s~dg~I~vw 861 (903)
.+.+++|++++.+|++++ .+ .|++||+.+++ ++..+..+ ......++|+|++++++++ +.++.|.+|
T Consensus 158 ~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~ 234 (300)
T TIGR03866 158 RPRFAEFTADGKELWVSSEIGGTVSVIDVATRK---VIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVV 234 (300)
T ss_pred CccEEEECCCCCEEEEEcCCCCEEEEEEcCcce---eeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEE
Confidence 457899999999775544 45 99999998773 33322211 1123568899999986664 456789999
Q ss_pred ECCCCcEEEEccCCCCEEEEEEecCCCEEEEE-ecCCcEEEcC
Q 002591 862 NMSENKTMTLTAHEGLIAALAVSTETGYVASA-SHDKFVKLWK 903 (903)
Q Consensus 862 dl~~~~~~~~~~h~~~V~sl~~spdg~~LaSg-s~DG~I~IWd 903 (903)
|+.+++.+....+...+.+++|+|++++|+++ +.+|.|+|||
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d 277 (300)
T TIGR03866 235 DAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVID 277 (300)
T ss_pred ECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEE
Confidence 99998887554566689999999999999886 4689999997
No 99
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.92 E-value=3.6e-24 Score=228.95 Aligned_cols=275 Identities=19% Similarity=0.300 Sum_probs=232.7
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---CceeEEec--cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT---LKSKTNLE--EHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 695 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t---~~~~~~l~--~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~ 695 (903)
.|..-|.++.+|...++++||+ .|.|+|||+.. ...+..+. .....|.++.+.|||+.|++|++-.+|.|||+.
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgG-kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLA 495 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLA 495 (705)
T ss_pred ccCcEEEEEEecCCcceeEecC-CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeecc
Confidence 5888999999999999999997 57899999873 23333343 245679999999999999999999999999998
Q ss_pred CCCceeE-EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEEcCCe
Q 002591 696 NPGYSLR-TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAAAENV 771 (903)
Q Consensus 696 ~~~~~~~-~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s~dg~ 771 (903)
.+...++ .+....-.+++++.+||.+ +.++|..||.|.|||+.+...++.|.+ +..+|.++++|..|.+|+-|++
T Consensus 496 apTprikaeltssapaCyALa~spDak-vcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDnt 574 (705)
T KOG0639|consen 496 APTPRIKAELTSSAPACYALAISPDAK-VCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNT 574 (705)
T ss_pred CCCcchhhhcCCcchhhhhhhcCCccc-eeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccc
Confidence 7544333 3333445678899999976 455888899999999999999999986 5788999999999999999999
Q ss_pred EEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEE
Q 002591 772 VSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLL 850 (903)
Q Consensus 772 I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~ 850 (903)
|+.||+++++.+.... ..+.|.++.++|.+++|+.|-++ .+.|...... ..+.+.-|+..|.++.|.+.|++++
T Consensus 575 vRcWDlregrqlqqhd-F~SQIfSLg~cP~~dWlavGMens~vevlh~skp----~kyqlhlheScVLSlKFa~cGkwfv 649 (705)
T KOG0639|consen 575 VRCWDLREGRQLQQHD-FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKP----EKYQLHLHESCVLSLKFAYCGKWFV 649 (705)
T ss_pred eeehhhhhhhhhhhhh-hhhhheecccCCCccceeeecccCcEEEEecCCc----cceeecccccEEEEEEecccCceee
Confidence 9999999987665433 56789999999999999999888 7888776543 3445566789999999999999999
Q ss_pred EEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 851 VIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 851 t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
+.+.|+.+..|...-|..+.-....+.|.++.++.|.+||+||+.|....||
T Consensus 650 StGkDnlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVY 701 (705)
T KOG0639|consen 650 STGKDNLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVY 701 (705)
T ss_pred ecCchhhhhhccCccccceeeccccCcceeeeeccCceEEEecCCCcceEEE
Confidence 9999999999999999888777888999999999999999999999887776
No 100
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=2.1e-23 Score=212.44 Aligned_cols=275 Identities=20% Similarity=0.304 Sum_probs=222.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEec
Q 002591 626 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM 705 (903)
Q Consensus 626 V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~ 705 (903)
..||.|++.|.+||+|+.||.|.|||+.|...-+.+.+|..+|++++|++||+.|+|+|.|..|.+||+.. +.++..+.
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~-gs~l~rir 104 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLK-GSPLKRIR 104 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccC-CCceeEEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998 55776665
Q ss_pred cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe--eeEEe-----ecCceeEEEecCCCEEEEEEcCCeEEEEECC
Q 002591 706 GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS--CTRVF-----KGGTAQMRFQPHLGRYLAAAAENVVSILDAE 778 (903)
Q Consensus 706 ~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~--~~~~~-----~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~ 778 (903)
...+|+...|+|...+.++++-.+..-.+.++...+ ++..- .....+..|.+.++++++|...|.+.+||..
T Consensus 105 -f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 105 -FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE 183 (405)
T ss_pred -ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence 678999999999887777666656556666665432 21111 1122334588999999999999999999999
Q ss_pred CCeEEEEecCCC-CCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC------CCcceEEEee--cCCCceEEEEEeCCCCE
Q 002591 779 TQACRLSLQGHT-KPIDSVCWDPSGELLASVSED-SVRVWTVGSG------SEGECVHELS--CNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 779 t~~~~~~l~~h~-~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~------~~~~~i~~~~--~~~~~i~si~~sp~g~~ 848 (903)
+.+++..++-.. ..|..|.|+-.|++|+.-+.| .||.|+++.- .+....+.+. .+...-.+|+|+.+|.|
T Consensus 184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeY 263 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEY 263 (405)
T ss_pred hheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccE
Confidence 999999888665 789999999999999999999 9999998632 1111111111 12334568899999999
Q ss_pred EEEEECC-CeEEEEECCCCcEE-EEccCC-CCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 849 LLVIGCY-QSLELWNMSENKTM-TLTAHE-GLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 849 l~t~s~d-g~I~vwdl~~~~~~-~~~~h~-~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+++++.. ..++||....|.++ .+.+.. ....++.|+|-...|++- ..|.|+||.
T Consensus 264 v~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~ 320 (405)
T KOG1273|consen 264 VCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWA 320 (405)
T ss_pred EEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEE
Confidence 9888754 48999999999998 555555 578889999998888877 789999993
No 101
>PTZ00420 coronin; Provisional
Probab=99.92 E-value=1.2e-22 Score=235.76 Aligned_cols=229 Identities=16% Similarity=0.227 Sum_probs=176.6
Q ss_pred eeeeeEeecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCc--------eeEEeccCCCCeEEEEECCCCCE-EEE
Q 002591 613 FKEANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTLK--------SKTNLEEHSSLITDVRFSPSMPR-LAT 682 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspd-g~~Latgs~Dg~V~vWd~~t~~--------~~~~l~~h~~~V~~l~fspdg~~-Las 682 (903)
...+..+.+|.+.|.+|+|+|+ +.+||+|+.|++|+|||+.++. .+..+.+|...|.+|+|+|++.. |++
T Consensus 64 ~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaS 143 (568)
T PTZ00420 64 KPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCS 143 (568)
T ss_pred CceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEE
Confidence 3567789999999999999997 7899999999999999997532 34567899999999999999876 578
Q ss_pred EeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCce---eE-----
Q 002591 683 SSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTA---QM----- 754 (903)
Q Consensus 683 gs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~---~v----- 754 (903)
++.|++|+|||+++ +..+..+. |...|.+++|++++. +|++++.|+.|+|||+++++++..+.++.. ..
T Consensus 144 gS~DgtIrIWDl~t-g~~~~~i~-~~~~V~SlswspdG~-lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~ 220 (568)
T PTZ00420 144 SGFDSFVNIWDIEN-EKRAFQIN-MPKKLSSLKWNIKGN-LLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWID 220 (568)
T ss_pred EeCCCeEEEEECCC-CcEEEEEe-cCCcEEEEEECCCCC-EEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEee
Confidence 99999999999998 44555554 567899999999977 556888899999999999998888776432 11
Q ss_pred EEecCCCEEEEEEcCC----eEEEEECCC-CeEEEEec--CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcce
Q 002591 755 RFQPHLGRYLAAAAEN----VVSILDAET-QACRLSLQ--GHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGEC 826 (903)
Q Consensus 755 ~~sp~~~~ll~~s~dg----~I~i~D~~t-~~~~~~l~--~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~ 826 (903)
.|+++++++++++.++ .|+|||+++ .+++..+. .+.+.+......+++.++++|+.| .|++|++..+. ...
T Consensus 221 ~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~-~~~ 299 (568)
T PTZ00420 221 GLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS-IRK 299 (568)
T ss_pred eEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc-EEe
Confidence 2347888999988774 799999995 45555443 233334444445568889999888 99999997652 223
Q ss_pred EEEeecCCCceEEEEEeCCC
Q 002591 827 VHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 827 i~~~~~~~~~i~si~~sp~g 846 (903)
+..+. +..++..++|.|+.
T Consensus 300 l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 300 VNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred ecccc-cCCCccceEEcccc
Confidence 33333 45677888998864
No 102
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.92 E-value=1.7e-22 Score=207.48 Aligned_cols=246 Identities=20% Similarity=0.341 Sum_probs=205.3
Q ss_pred CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEe-CCCcE
Q 002591 655 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD-GDGEI 733 (903)
Q Consensus 655 ~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs-~Dg~I 733 (903)
.+..+.+......|++|.|+.+|.+|++++.|.+|+|||..+ ++.++++..+.-.|..++|......++.+.. .|.+|
T Consensus 4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~-g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLS-GKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCC-CceeeEeecccccccEEEEecCCceEEEccCCCCCce
Confidence 445566667788999999999999999999999999999998 7888998888888999999877666664332 38899
Q ss_pred EEEEcCCCeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC
Q 002591 734 RYWSINNGSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE 810 (903)
Q Consensus 734 ~iwDi~t~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~ 810 (903)
|+.++.+.+.++.|.++ +..++.+|-+..+++++.|++|++||++..++...+.....+ .++|+|.|-++|++..
T Consensus 83 ryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~p--i~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 83 RYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRP--IAAFDPEGLIFALANG 160 (311)
T ss_pred EEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCc--ceeECCCCcEEEEecC
Confidence 99999999999999986 567889999999999999999999999988887776644444 4689999999999998
Q ss_pred C-eEEEEECCCCCCcc-eEEEee-cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCC---EEEEEE
Q 002591 811 D-SVRVWTVGSGSEGE-CVHELS-CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGL---IAALAV 883 (903)
Q Consensus 811 d-~I~iwdl~s~~~~~-~i~~~~-~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~---V~sl~~ 883 (903)
. .|++||+++..... ....+. ........+.|+|+|++|+.++..+.+++.|.-+|.+. .+..+... -...+|
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~f 240 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATF 240 (311)
T ss_pred CCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEE
Confidence 8 99999999864322 222222 34667899999999999999999999999999999877 55544332 257789
Q ss_pred ecCCCEEEEEecCCcEEEcC
Q 002591 884 STETGYVASASHDKFVKLWK 903 (903)
Q Consensus 884 spdg~~LaSgs~DG~I~IWd 903 (903)
+||+++|++|+.||+|++|+
T Consensus 241 tPds~Fvl~gs~dg~i~vw~ 260 (311)
T KOG1446|consen 241 TPDSKFVLSGSDDGTIHVWN 260 (311)
T ss_pred CCCCcEEEEecCCCcEEEEE
Confidence 99999999999999999996
No 103
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.92 E-value=1.5e-23 Score=223.96 Aligned_cols=245 Identities=18% Similarity=0.372 Sum_probs=203.3
Q ss_pred ecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCc----------eeEEeccCCCCeEEEEECCCCC-EEEEEeCCC
Q 002591 620 RASTSKVICCHFSSDG-KLLATGGHDKKAVLWHTDTLK----------SKTNLEEHSSLITDVRFSPSMP-RLATSSFDK 687 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg-~~Latgs~Dg~V~vWd~~t~~----------~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg 687 (903)
-.|.+.|+.+.+-|.. .+||+.+..+.|.|||..+.. +..++.+|...-..|+|++... +|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 4599999999999965 577888889999999976321 2237889999889999998755 799999999
Q ss_pred cEEEEeCCCCCc------eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCC
Q 002591 688 TVRVWDADNPGY------SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLG 761 (903)
Q Consensus 688 ~I~IWDl~~~~~------~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~ 761 (903)
+|++||+..... ....+.+|...|..++|++....+|+++++|+.+.|||+|++.
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~------------------- 261 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT------------------- 261 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCC-------------------
Confidence 999999975433 3567889999999999999999999999999999999998631
Q ss_pred EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC-CCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEE
Q 002591 762 RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPS-GELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHS 839 (903)
Q Consensus 762 ~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd-g~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~s 839 (903)
.++.....+|..+|+|++|+|- +.+||+|+.| +|++||+|+.. .+++.+.+|...|..
T Consensus 262 ------------------~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~--~~lh~~e~H~dev~~ 321 (422)
T KOG0264|consen 262 ------------------SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLN--KPLHTFEGHEDEVFQ 321 (422)
T ss_pred ------------------CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcc--cCceeccCCCcceEE
Confidence 1122234679999999999995 4588999988 99999999875 588999999999999
Q ss_pred EEEeCCC-CEEEEEECCCeEEEEECCCCc--------------E-EEEccCCCCEEEEEEecCCCE-EEEEecCCcEEEc
Q 002591 840 CVFHPTY-PSLLVIGCYQSLELWNMSENK--------------T-MTLTAHEGLIAALAVSTETGY-VASASHDKFVKLW 902 (903)
Q Consensus 840 i~~sp~g-~~l~t~s~dg~I~vwdl~~~~--------------~-~~~~~h~~~V~sl~~spdg~~-LaSgs~DG~I~IW 902 (903)
+.|+|.. ..|++++.|+.+.|||+..-. + ..-.+|...|..+.|+|+..+ |+|.++|+.+.||
T Consensus 322 V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW 401 (422)
T KOG0264|consen 322 VEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIW 401 (422)
T ss_pred EEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEe
Confidence 9999975 567778899999999996421 1 255689999999999998875 7788999999999
Q ss_pred C
Q 002591 903 K 903 (903)
Q Consensus 903 d 903 (903)
+
T Consensus 402 ~ 402 (422)
T KOG0264|consen 402 Q 402 (422)
T ss_pred e
Confidence 6
No 104
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=9.8e-24 Score=208.43 Aligned_cols=245 Identities=22% Similarity=0.310 Sum_probs=202.5
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC---ceeEEeccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeC
Q 002591 620 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL---KSKTNLEEHSSLITDVRFSP--SMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~---~~~~~l~~h~~~V~~l~fsp--dg~~Lasgs~Dg~I~IWDl 694 (903)
..|.+.|.++...-.|++|||++.|++|+||.+... +.+.++.+|.++|+.++|.. -|.+||++++||.|.||.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 469999999999999999999999999999998742 67889999999999999965 6899999999999999998
Q ss_pred CCCC-ceeEEeccCCCceEEEEecCCC-CeEEEEEeCCCcEEEEEcCCC------eeeEEeecCceeEEEecC---C---
Q 002591 695 DNPG-YSLRTFMGHSASVMSLDFHPNK-DDLICSCDGDGEIRYWSINNG------SCTRVFKGGTAQMRFQPH---L--- 760 (903)
Q Consensus 695 ~~~~-~~~~~~~~h~~~V~sl~fsp~~-~~ll~sgs~Dg~I~iwDi~t~------~~~~~~~~~~~~v~~sp~---~--- 760 (903)
.++. .....+..|...|++++|.|.+ ..+|++++.||.|.|.+++.. +....+..+++.++|.|. +
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 8742 2244667899999999999874 336678889999999998765 223334557888998886 3
Q ss_pred --------CEEEEEEcCCeEEEEECCCC--eEEEEecCCCCCeEEEEEcCCC----CEEEEEeCC-eEEEEECCCCCCcc
Q 002591 761 --------GRYLAAAAENVVSILDAETQ--ACRLSLQGHTKPIDSVCWDPSG----ELLASVSED-SVRVWTVGSGSEGE 825 (903)
Q Consensus 761 --------~~ll~~s~dg~I~i~D~~t~--~~~~~l~~h~~~V~sl~~spdg----~~lasgs~d-~I~iwdl~s~~~~~ 825 (903)
.+|++++.|+.|+||+...+ +...++.+|.+.|+.++|.|.- .+|++++.| +|.||..+...+..
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~w 247 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPW 247 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCcc
Confidence 56999999999999998876 3444588999999999999954 389999999 99999988443333
Q ss_pred eEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 826 CVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 826 ~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
....+......+..+.|+..|+.|++++.|+.|.+|.-+
T Consensus 248 k~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 248 KKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred cccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 344444456789999999999999999999999999754
No 105
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.91 E-value=1.4e-23 Score=232.09 Aligned_cols=244 Identities=24% Similarity=0.335 Sum_probs=211.3
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCC---CCEEEEEeCCCcEEEEeCCC
Q 002591 620 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS---MPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspd---g~~Lasgs~Dg~I~IWDl~~ 696 (903)
-+..-.|.|++.+|+|.+||+|..-|+++|||+...+....++.|...|.|+.|+.- .++||+++.|.-|.|||+..
T Consensus 456 ~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~r 535 (1080)
T KOG1408|consen 456 CDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKR 535 (1080)
T ss_pred cCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccc
Confidence 345667999999999999999999999999999999999999999999999999863 46899999999999999988
Q ss_pred CCceeEEeccCCCceEEEEecCCC-CeEEEEEeCCCcEEEEEcCCCeeeEEe--------ecCceeEEEecCCCEEEEEE
Q 002591 697 PGYSLRTFMGHSASVMSLDFHPNK-DDLICSCDGDGEIRYWSINNGSCTRVF--------KGGTAQMRFQPHLGRYLAAA 767 (903)
Q Consensus 697 ~~~~~~~~~~h~~~V~sl~fsp~~-~~ll~sgs~Dg~I~iwDi~t~~~~~~~--------~~~~~~v~~sp~~~~ll~~s 767 (903)
....+.++.+|...|+++.|.-.| +.-+++|+.|..|.+--.........| +.....+.+.|..+++++++
T Consensus 536 ny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~c 615 (1080)
T KOG1408|consen 536 NYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVC 615 (1080)
T ss_pred ccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEe
Confidence 777888999999999999998765 234559999988765433211111111 23456788999999999999
Q ss_pred cCCeEEEEECCCCeEEEEecC---CCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEe
Q 002591 768 AENVVSILDAETQACRLSLQG---HTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFH 843 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~~~~l~~---h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s 843 (903)
.|..|+|||+.+++.++.|++ |++....+..+|.|.||++.+.| ++.+||+.++ +|+....+|...|+.+.|.
T Consensus 616 QDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sg---EcvA~m~GHsE~VTG~kF~ 692 (1080)
T KOG1408|consen 616 QDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSG---ECVAQMTGHSEAVTGVKFL 692 (1080)
T ss_pred cccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccc---hhhhhhcCcchheeeeeec
Confidence 999999999999999999986 66778888999999999999999 9999999888 8999999999999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCC
Q 002591 844 PTYPSLLVIGCYQSLELWNMSEN 866 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vwdl~~~ 866 (903)
+|.++|++.+.||.|.||.+...
T Consensus 693 nDCkHlISvsgDgCIFvW~lp~~ 715 (1080)
T KOG1408|consen 693 NDCKHLISVSGDGCIFVWKLPLT 715 (1080)
T ss_pred ccchhheeecCCceEEEEECchh
Confidence 99999999999999999998653
No 106
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.91 E-value=1e-22 Score=203.49 Aligned_cols=231 Identities=21% Similarity=0.299 Sum_probs=207.5
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC
Q 002591 660 NLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 739 (903)
Q Consensus 660 ~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~ 739 (903)
.+.+|..+++-|.|+.+|.+|++|+.|.++.||-..+ ++.+-++.+|.+.|+|++...+...++ +|+.|.++++||++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~n-GerlGty~GHtGavW~~Did~~s~~li-TGSAD~t~kLWDv~ 82 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLN-GERLGTYDGHTGAVWCCDIDWDSKHLI-TGSADQTAKLWDVE 82 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecC-CceeeeecCCCceEEEEEecCCcceee-eccccceeEEEEcC
Confidence 3578999999999999999999999999999998876 788999999999999999998877555 99999999999999
Q ss_pred CCeeeEEeec--CceeEEEecCCCEEEEEEcC-----CeEEEEECC-------CCeEEEEecCCCCCeEEEEEcCCCCEE
Q 002591 740 NGSCTRVFKG--GTAQMRFQPHLGRYLAAAAE-----NVVSILDAE-------TQACRLSLQGHTKPIDSVCWDPSGELL 805 (903)
Q Consensus 740 t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~d-----g~I~i~D~~-------t~~~~~~l~~h~~~V~sl~~spdg~~l 805 (903)
+|+++..++. .+..+.|+..++.++++..+ +.|.++|++ ..+++..+..+.+.++.+.|.|-+++|
T Consensus 83 tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i 162 (327)
T KOG0643|consen 83 TGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI 162 (327)
T ss_pred CCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE
Confidence 9999988875 56789999999988887763 689999998 456788888899999999999999999
Q ss_pred EEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEe
Q 002591 806 ASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVS 884 (903)
Q Consensus 806 asgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~s 884 (903)
++|.++ .|.+||++++. ..+.....|...|+.+.++++..++++++.|.+-++||+.+-.++.....+.+|++.+++
T Consensus 163 i~Ghe~G~is~~da~~g~--~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~PvN~aais 240 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGK--ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAIS 240 (327)
T ss_pred EEecCCCcEEEEEcccCc--eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeeecccccceecc
Confidence 999999 99999999874 455666778889999999999999999999999999999999999888889999999999
Q ss_pred cCCCEEEEEe
Q 002591 885 TETGYVASAS 894 (903)
Q Consensus 885 pdg~~LaSgs 894 (903)
|...+++.|+
T Consensus 241 P~~d~VilgG 250 (327)
T KOG0643|consen 241 PLLDHVILGG 250 (327)
T ss_pred cccceEEecC
Confidence 9888777665
No 107
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.91 E-value=1e-22 Score=217.10 Aligned_cols=281 Identities=18% Similarity=0.269 Sum_probs=233.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC--CCceeEEeccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTD--TLKSKTNLEEHSSLITDVRFSPSMP-RLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~--t~~~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I~IWDl~~~~ 698 (903)
..+.|+||.|+|.-.+|++|+.|++++||.++ +...+..+.-...+|.+.+|.|+|. .+++++....++.||+.+..
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak 291 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK 291 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc
Confidence 45789999999999999999999999999886 4556777777888999999999999 89999999999999998732
Q ss_pred c-eeEEeccCC-CceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcCCeEEE
Q 002591 699 Y-SLRTFMGHS-ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAENVVSI 774 (903)
Q Consensus 699 ~-~~~~~~~h~-~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~dg~I~i 774 (903)
. .+....++. ..+..+..++++. +|+..+..|.|.+....+++.+..++ +.+..++|+.++..+++++.+|.|++
T Consensus 292 ~~k~~~~~g~e~~~~e~FeVShd~~-fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~GeV~v 370 (514)
T KOG2055|consen 292 VTKLKPPYGVEEKSMERFEVSHDSN-FIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGTGEVYV 370 (514)
T ss_pred cccccCCCCcccchhheeEecCCCC-eEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCCceEEE
Confidence 1 123333443 3566788899977 56688899999999999999887765 67888999999999999999999999
Q ss_pred EECCCCeEEEEecCCCC-CeEEEEEcCCCCEEEEEeCC-eEEEEECCCC---CCcceEEEeecCCCceEEEEEeCCCCEE
Q 002591 775 LDAETQACRLSLQGHTK-PIDSVCWDPSGELLASVSED-SVRVWTVGSG---SEGECVHELSCNGNKFHSCVFHPTYPSL 849 (903)
Q Consensus 775 ~D~~t~~~~~~l~~h~~-~V~sl~~spdg~~lasgs~d-~I~iwdl~s~---~~~~~i~~~~~~~~~i~si~~sp~g~~l 849 (903)
||++...+++.+....+ .-+++|.+.++.|||+|++. .|.|||..+. ...+.+..+..-...|+++.|+++...|
T Consensus 371 ~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiL 450 (514)
T KOG2055|consen 371 WNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQIL 450 (514)
T ss_pred EecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhh
Confidence 99999999998874322 34678888999999999998 8999997643 3456666666667789999999999998
Q ss_pred EEEECC--CeEEEEECCCCcEE-EEc---cCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 850 LVIGCY--QSLELWNMSENKTM-TLT---AHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 850 ~t~s~d--g~I~vwdl~~~~~~-~~~---~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+.++.. ..+++..+.+..+. .+. ..-+.|+|++|+|.+.+||.|..+|.|.+|+
T Consensus 451 AiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~k 510 (514)
T KOG2055|consen 451 AIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFK 510 (514)
T ss_pred hhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEe
Confidence 888764 58999999887776 222 3446799999999999999999999999996
No 108
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.91 E-value=9.5e-23 Score=226.55 Aligned_cols=239 Identities=21% Similarity=0.378 Sum_probs=209.9
Q ss_pred ceeeeeEeecCCCCeEE-EEEcC-CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcE
Q 002591 612 SFKEANSVRASTSKVIC-CHFSS-DGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~-l~fsp-dg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
.+.+...+.+|.+-|.+ ++|.+ ++-+|++|+.|++|.+|......++.++++|...|+|++...++. +++||.|.++
T Consensus 46 ~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~Ta 124 (745)
T KOG0301|consen 46 QYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTA 124 (745)
T ss_pred ccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccce
Confidence 56677788999999988 89886 555799999999999999999999999999999999999888887 9999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEE---EecCCCEEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMR---FQPHLGRYLAA 766 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~---~sp~~~~ll~~ 766 (903)
+||-.. .+...+.+|...|+++.+.|++ .++||+.|.+|++|.- ++++++|.+|..+++ +.+ +..|+++
T Consensus 125 kvW~~~---~l~~~l~gH~asVWAv~~l~e~--~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~-~~~flSc 196 (745)
T KOG0301|consen 125 KVWRIG---ELVYSLQGHTASVWAVASLPEN--TYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLD-DSHFLSC 196 (745)
T ss_pred EEecch---hhhcccCCcchheeeeeecCCC--cEEeccCcceeeeccC--CchhhhhccchhheeeeEEec-CCCeEee
Confidence 999874 4667799999999999999986 4559999999999975 788899988866654 444 4678999
Q ss_pred EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 767 AAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
+.||.|++|++ +++++.++.+|+.-|.++....++..|+++++| +++||+.. .|...+......|.++.+-++
T Consensus 197 sNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~-----e~~q~I~lPttsiWsa~~L~N 270 (745)
T KOG0301|consen 197 SNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD-----ECVQVITLPTTSIWSAKVLLN 270 (745)
T ss_pred cCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC-----ceEEEEecCccceEEEEEeeC
Confidence 99999999999 899999999999999999988888899999999 99999986 677777776778999998888
Q ss_pred CCEEEEEECCCeEEEEECCCC
Q 002591 846 YPSLLVIGCYQSLELWNMSEN 866 (903)
Q Consensus 846 g~~l~t~s~dg~I~vwdl~~~ 866 (903)
|+ |++|++||.||||.....
T Consensus 271 gD-Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 271 GD-IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred CC-EEEeccCceEEEEEeccc
Confidence 87 999999999999988743
No 109
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=2.4e-22 Score=204.64 Aligned_cols=255 Identities=20% Similarity=0.343 Sum_probs=199.2
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC----CCceeEEeccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEe
Q 002591 620 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD----TLKSKTNLEEHSSLITDVRFSP--SMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~----t~~~~~~l~~h~~~V~~l~fsp--dg~~Lasgs~Dg~I~IWD 693 (903)
.+|.+-|.|+.|...|+++|||+.|.+|+|||.+ +..+....+.|.+.|..|.|.+ -|..+|+++.|++|.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 4689999999999999999999999999999964 4466777889999999999954 388999999999999997
Q ss_pred CCCC-----C---ceeEEeccCCCceEEEEecCCC-CeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEE
Q 002591 694 ADNP-----G---YSLRTFMGHSASVMSLDFHPNK-DDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYL 764 (903)
Q Consensus 694 l~~~-----~---~~~~~~~~h~~~V~sl~fsp~~-~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll 764 (903)
-... + ....++......|++|+|.|.. +..+++++.||+||||+.-.-..+..+.
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~---------------- 153 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWT---------------- 153 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccch----------------
Confidence 6211 1 2345666778899999999963 3467799999999999876543222221
Q ss_pred EEEcCCeEEEEECCCC--eEEEEecCCCCCeEEEEEcCC---CCEEEEEeCC------eEEEEECCCCC-CcceEEEeec
Q 002591 765 AAAAENVVSILDAETQ--ACRLSLQGHTKPIDSVCWDPS---GELLASVSED------SVRVWTVGSGS-EGECVHELSC 832 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~--~~~~~l~~h~~~V~sl~~spd---g~~lasgs~d------~I~iwdl~s~~-~~~~i~~~~~ 832 (903)
+... ..+.....+..+..|+.|++. ..+||.|+++ .++||...... +...+.++..
T Consensus 154 ------------Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d 221 (361)
T KOG2445|consen 154 ------------LQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPD 221 (361)
T ss_pred ------------hhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCC
Confidence 1000 000011235667889999974 3489999887 79999887654 5567778889
Q ss_pred CCCceEEEEEeCC----CCEEEEEECCCeEEEEECCCCc--------------------EE-EEccCCCCEEEEEEecCC
Q 002591 833 NGNKFHSCVFHPT----YPSLLVIGCYQSLELWNMSENK--------------------TM-TLTAHEGLIAALAVSTET 887 (903)
Q Consensus 833 ~~~~i~si~~sp~----g~~l~t~s~dg~I~vwdl~~~~--------------------~~-~~~~h~~~V~sl~~spdg 887 (903)
+..+|++++|.|+ ...|++++.|| |+||.+.... .+ .+..|.+.|+.+.|+-.|
T Consensus 222 ~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtG 300 (361)
T KOG2445|consen 222 HTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTG 300 (361)
T ss_pred CCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeee
Confidence 9999999999995 45688999999 9999987411 11 466899999999999999
Q ss_pred CEEEEEecCCcEEEcC
Q 002591 888 GYVASASHDKFVKLWK 903 (903)
Q Consensus 888 ~~LaSgs~DG~I~IWd 903 (903)
..|++.++||+||+|+
T Consensus 301 tiLsStGdDG~VRLWk 316 (361)
T KOG2445|consen 301 TILSSTGDDGCVRLWK 316 (361)
T ss_pred eEEeecCCCceeeehh
Confidence 9999999999999996
No 110
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.91 E-value=2.2e-22 Score=212.86 Aligned_cols=249 Identities=19% Similarity=0.250 Sum_probs=215.2
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
+-..+..|+||...|+.+.|+++...+++++.|..|+||...........+.|..+|+.+..+|.|.||++++.||+..+
T Consensus 250 s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~F 329 (506)
T KOG0289|consen 250 SNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAF 329 (506)
T ss_pred hhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEE
Confidence 44567789999999999999999999999999999999999887888889999999999999999999999999999999
Q ss_pred EeCCCCCceeEEecc--CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEE
Q 002591 692 WDADNPGYSLRTFMG--HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 692 WDl~~~~~~~~~~~~--h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~ 766 (903)
.|+++ +..+..... ..-.++++.|||||- +|.+|..||.|+|||+.+...+..|.+ .+..+.|+.+|-+++++
T Consensus 330 sd~~~-g~~lt~vs~~~s~v~~ts~~fHpDgL-ifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~ 407 (506)
T KOG0289|consen 330 SDISS-GSQLTVVSDETSDVEYTSAAFHPDGL-IFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATA 407 (506)
T ss_pred EEccC-CcEEEEEeeccccceeEEeeEcCCce-EEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEE
Confidence 99998 555544432 234589999999965 778999999999999999988877765 57789999999999999
Q ss_pred EcCCeEEEEECCCCeEEEEecCC-CCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeC
Q 002591 767 AAENVVSILDAETQACRLSLQGH-TKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP 844 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h-~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp 844 (903)
+.|+.|++||+|..+...++... ...|.+++|+..|.+|+.++.+ .|++++-.+ +...++..+..|.+..+.+.|..
T Consensus 408 add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~-k~W~~~~~~~~~sg~st~v~Fg~ 486 (506)
T KOG0289|consen 408 ADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKT-KSWTEIKELADHSGLSTGVRFGE 486 (506)
T ss_pred ecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEeccc-ccceeeehhhhcccccceeeecc
Confidence 99999999999998877776643 3479999999999999999888 777777544 34567778888888899999999
Q ss_pred CCCEEEEEECCCeEEEEEC
Q 002591 845 TYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 845 ~g~~l~t~s~dg~I~vwdl 863 (903)
...++++++.|..++||.+
T Consensus 487 ~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 487 HAQYLASTSMDAILRLYAL 505 (506)
T ss_pred cceEEeeccchhheEEeec
Confidence 9999999999999888864
No 111
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=2.3e-23 Score=229.72 Aligned_cols=303 Identities=16% Similarity=0.231 Sum_probs=241.1
Q ss_pred CcCCCCcccccccCcc---eeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC--ceeEEeccCCCCeEEE
Q 002591 597 PRDAGGRGMDVSQGFS---FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL--KSKTNLEEHSSLITDV 671 (903)
Q Consensus 597 ~~~~~~~~~d~~~~~~---~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~--~~~~~l~~h~~~V~~l 671 (903)
++|+..+.|.+..... -....+++.|.+-|++++...+++.|++++.|-+|++|+...+ -++.++..|.+.|.||
T Consensus 44 GRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcl 123 (735)
T KOG0308|consen 44 GRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCL 123 (735)
T ss_pred CCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheee
Confidence 4455555555543323 2246788999999999999999999999999999999998866 6888999999999999
Q ss_pred EE-CCCCCEEEEEeCCCcEEEEeCCCCCc---------eeEEec-cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC
Q 002591 672 RF-SPSMPRLATSSFDKTVRVWDADNPGY---------SLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN 740 (903)
Q Consensus 672 ~f-spdg~~Lasgs~Dg~I~IWDl~~~~~---------~~~~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t 740 (903)
++ .++...+|+|+.|+.|.|||+++... ....+. ++...|++++..+.+ .+|++|+..+.|++||.++
T Consensus 124 a~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~-t~ivsGgtek~lr~wDprt 202 (735)
T KOG0308|consen 124 AYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG-TIIVSGGTEKDLRLWDPRT 202 (735)
T ss_pred eecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc-eEEEecCcccceEEecccc
Confidence 99 88888999999999999999986311 122233 889999999999987 5778999999999999999
Q ss_pred CeeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEE
Q 002591 741 GSCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVW 816 (903)
Q Consensus 741 ~~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iw 816 (903)
.+.+-.+.++ +..+..+.+|..++++++||+|++||+...+|+.++..|...|.++..+|+-.++++|+.| .|..=
T Consensus 203 ~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~T 282 (735)
T KOG0308|consen 203 CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRT 282 (735)
T ss_pred ccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEec
Confidence 9877777664 5677789999999999999999999999999999999999999999999999999999999 99999
Q ss_pred ECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEE-------------------------
Q 002591 817 TVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTL------------------------- 871 (903)
Q Consensus 817 dl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~------------------------- 871 (903)
|+++......+ ...+.+|..+..+....-+-+++.|+.|+-|...-...+..
T Consensus 283 dl~n~~~~tli---ck~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~v 359 (735)
T KOG0308|consen 283 DLRNPAKSTLI---CKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSV 359 (735)
T ss_pred ccCCchhheEe---ecCCCchhhhhhccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCcee
Confidence 99886322222 22366777777776666678888999999997653221100
Q ss_pred ccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 872 TAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 872 ~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
......|...+.-.|.++++|-...|.+.+||
T Consensus 360 i~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwD 391 (735)
T KOG0308|consen 360 IPGGAAIKKHAMLNDKRHVLTKDAKGNVALWD 391 (735)
T ss_pred ccCchhhhhhhhhcCcceEeeecCCCCEEEEE
Confidence 00111233334445778999999999999997
No 112
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.3e-23 Score=204.67 Aligned_cols=241 Identities=24% Similarity=0.424 Sum_probs=200.4
Q ss_pred ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--ceeEEeccCCCceEEEEe-cCCCCeEEEEEeCCCcEEEEEc
Q 002591 662 EEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG--YSLRTFMGHSASVMSLDF-HPNKDDLICSCDGDGEIRYWSI 738 (903)
Q Consensus 662 ~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~--~~~~~~~~h~~~V~sl~f-sp~~~~ll~sgs~Dg~I~iwDi 738 (903)
..|.+.|.++...-.|++|||++.|++|+||.+++.+ ..+.++.+|.++|+.++| +|.-..+|++|+.||.|.||.-
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 4688999999999999999999999999999999865 678899999999999999 5555669999999999999999
Q ss_pred CCCeeeEE-----eecCceeEEEecCC--CEEEEEEcCCeEEEEECCCC---eEEEEecCCCCCeEEEEEcCC---C---
Q 002591 739 NNGSCTRV-----FKGGTAQMRFQPHL--GRYLAAAAENVVSILDAETQ---ACRLSLQGHTKPIDSVCWDPS---G--- 802 (903)
Q Consensus 739 ~t~~~~~~-----~~~~~~~v~~sp~~--~~ll~~s~dg~I~i~D~~t~---~~~~~l~~h~~~V~sl~~spd---g--- 802 (903)
++++..+. +...+++++|.|.+ -.|+++++||.|.|++.+.. ........|.-.|++++|.|. |
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 88864332 34568889988875 46777888999999987764 233445679999999999995 4
Q ss_pred --------CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC----CEEEEEECCCeEEEEECCCC---
Q 002591 803 --------ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY----PSLLVIGCYQSLELWNMSEN--- 866 (903)
Q Consensus 803 --------~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g----~~l~t~s~dg~I~vwdl~~~--- 866 (903)
+.|++|+.| .|+||+..++ ....-..+..|...|+.++|.|.- .+|++++.||+|.||..+..
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~-~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~ 246 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSD-SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEP 246 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCc-chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCccCc
Confidence 569999999 9999999886 334445588999999999999964 56999999999999987632
Q ss_pred -cEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 867 -KTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 867 -~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+...+......++.+.|+..|.+|+.++.|+.|.+|+
T Consensus 247 wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 247 WKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred ccccccccCCcceEEEEEeccccEEEEecCCcEEEEEE
Confidence 1224455678899999999999999999999999996
No 113
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.90 E-value=1.6e-22 Score=221.01 Aligned_cols=289 Identities=20% Similarity=0.254 Sum_probs=231.0
Q ss_pred cCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCE--EEEEeCC
Q 002591 609 QGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR--LATSSFD 686 (903)
Q Consensus 609 ~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~--Lasgs~D 686 (903)
..|.-.+...+++|++.|.||...|.|.+||+|+.||+|+||.+.++.+++++.- .+.|.||+|+|.+.. ||++- +
T Consensus 386 rPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-d~~I~~vaw~P~~~~~vLAvA~-~ 463 (733)
T KOG0650|consen 386 RPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-DSEIRSVAWNPLSDLCVLAVAV-G 463 (733)
T ss_pred CCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-cceeEEEEecCCCCceeEEEEe-c
Confidence 3456677888999999999999999999999999999999999999999999864 447999999998763 33333 2
Q ss_pred CcEEEEeC---------------------------------CC---CCceeEEeccCCCceEEEEecCCCCeEEEEEeC-
Q 002591 687 KTVRVWDA---------------------------------DN---PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG- 729 (903)
Q Consensus 687 g~I~IWDl---------------------------------~~---~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~- 729 (903)
..+.|-+. .. ...-++....|...|..|.||..|+++..++..
T Consensus 464 ~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~ 543 (733)
T KOG0650|consen 464 ECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDS 543 (733)
T ss_pred CceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCC
Confidence 22333322 10 011133445688899999999999977655543
Q ss_pred -CCcEEEEEcCCCeeeEEe---ecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEE
Q 002591 730 -DGEIRYWSINNGSCTRVF---KGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELL 805 (903)
Q Consensus 730 -Dg~I~iwDi~t~~~~~~~---~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~l 805 (903)
...|.|+++...+....| ++.+.++.|+|...++++++ ...|+|||+.....+.++.....+|.+++++|.|.-|
T Consensus 544 ~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaT-q~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GDnl 622 (733)
T KOG0650|consen 544 GNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVAT-QRSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGDNL 622 (733)
T ss_pred CcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEe-ccceEEEehhHHHHHHHHhcCCeeeeeeeecCCCCeE
Confidence 356889998876654433 56788899999988887765 4679999999988888888888899999999999999
Q ss_pred EEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC------CCc-EE---EEccC
Q 002591 806 ASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS------ENK-TM---TLTAH 874 (903)
Q Consensus 806 asgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~------~~~-~~---~~~~h 874 (903)
+.++.| .++.||+.-.. +....+..|...+++++||+....|++|+.|+++.||.-. .+- ++ .+.+|
T Consensus 623 i~gs~d~k~~WfDldlss--kPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH 700 (733)
T KOG0650|consen 623 ILGSYDKKMCWFDLDLSS--KPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGH 700 (733)
T ss_pred EEecCCCeeEEEEcccCc--chhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCc
Confidence 999999 99999997553 5667788889999999999999999999999999888432 222 22 56677
Q ss_pred CCC----EEEEEEecCCCEEEEEecCCcEEEc
Q 002591 875 EGL----IAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 875 ~~~----V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
... |..+.|+|.-.+|++++.||+|++|
T Consensus 701 ~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 701 EKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred eeecccceEeecccCCCceEEecCCCceEEee
Confidence 665 9999999999999999999999999
No 114
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.90 E-value=5.3e-21 Score=216.41 Aligned_cols=359 Identities=16% Similarity=0.219 Sum_probs=252.7
Q ss_pred CCCcceEEEEeCCCceeccCCCeeeeCCcchhhhhhccccccCCCCCceEEeeecCCCCC---cCCCCcccccccC-cc-
Q 002591 538 TTSKPLMMFGTDGAGTLTSPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSHDDTDP---RDAGGRGMDVSQG-FS- 612 (903)
Q Consensus 538 ~~~~~~i~~s~dg~~~~~~~~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~~~~d~~~~---~~~~~~~~d~~~~-~~- 612 (903)
..++.+.+...+.+++++.....|+-.+.++.+.+.... +..++...+.-.+... .+....+|+.... ..
T Consensus 74 ~lp~~I~alas~~~~vy~A~g~~i~~~~rgk~i~~~~~~-----~~a~v~~l~~fGe~lia~d~~~~l~vw~~s~~~~e~ 148 (910)
T KOG1539|consen 74 PLPDKITALASDKDYVYVASGNKIYAYARGKHIRHTTLL-----HGAKVHLLLPFGEHLIAVDISNILFVWKTSSIQEEL 148 (910)
T ss_pred CCCCceEEEEecCceEEEecCcEEEEEEccceEEEEecc-----ccceEEEEeeecceEEEEEccCcEEEEEeccccccc
Confidence 445667777888887777666666666666433332111 1133433333222211 1223334444332 11
Q ss_pred eeeeeEeecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEE
Q 002591 613 FKEANSVRASTSKVICCHFSSD--GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVR 690 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspd--g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~ 690 (903)
......++.-.+.|+++. +|. =+.|+.|+.+|.+.||++.+++.++++.++...|+++.=+|--..++.|..+|+|.
T Consensus 149 ~l~~~~~~~~~~~Ital~-HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~Vi 227 (910)
T KOG1539|consen 149 YLQSTFLKVEGDFITALL-HPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVI 227 (910)
T ss_pred cccceeeeccCCceeeEe-cchhheeeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEE
Confidence 111222233333377765 443 35789999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee----cCceeEEEecCCCEEEEE
Q 002591 691 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK----GGTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~----~~~~~v~~sp~~~~ll~~ 766 (903)
|++++. ++.+.+|+..-+.|+++.|..||..++++++..|.+.+||++..+...... +.+....|.+....++++
T Consensus 228 ifNlK~-dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta 306 (910)
T KOG1539|consen 228 IFNLKF-DKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTA 306 (910)
T ss_pred EEEccc-CcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeec
Confidence 999998 788889985569999999999999999999999999999999887665543 344555566665666666
Q ss_pred EcCCeEEEE--ECCCC--eEEE----------------------------------------------------------
Q 002591 767 AAENVVSIL--DAETQ--ACRL---------------------------------------------------------- 784 (903)
Q Consensus 767 s~dg~I~i~--D~~t~--~~~~---------------------------------------------------------- 784 (903)
+.|+.+++| |...+ +.++
T Consensus 307 ~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~ 386 (910)
T KOG1539|consen 307 GADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVN 386 (910)
T ss_pred cCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhccccccccccccc
Confidence 666544443 31111 0000
Q ss_pred ---------------------------------------------------Eec-----CCCCCeEEEEEcCCCCEEEEE
Q 002591 785 ---------------------------------------------------SLQ-----GHTKPIDSVCWDPSGELLASV 808 (903)
Q Consensus 785 ---------------------------------------------------~l~-----~h~~~V~sl~~spdg~~lasg 808 (903)
.+. .....+++++.++.|++.+.|
T Consensus 387 ~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG 466 (910)
T KOG1539|consen 387 VFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIG 466 (910)
T ss_pred ccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEe
Confidence 000 011346778888888887777
Q ss_pred eCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE------------------
Q 002591 809 SED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM------------------ 869 (903)
Q Consensus 809 s~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~------------------ 869 (903)
... .|.+|++.++-.......-..|...|+.++...-++.+++++.+|.+++||..++..+
T Consensus 467 ~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s 546 (910)
T KOG1539|consen 467 YSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVS 546 (910)
T ss_pred ccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehh
Confidence 766 8889998877332232223578899999999999999999999999999999875311
Q ss_pred ------------------------EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 870 ------------------------TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 870 ------------------------~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.+.+|.+.|++++|||||++|++++.|++|++||
T Consensus 547 ~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wD 604 (910)
T KOG1539|consen 547 DLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWD 604 (910)
T ss_pred hhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEe
Confidence 2345999999999999999999999999999998
No 115
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.90 E-value=1.1e-22 Score=218.68 Aligned_cols=235 Identities=16% Similarity=0.263 Sum_probs=189.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE------------eccCCCCeEEEEECCCCC-EEEEEeCCCcE
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN------------LEEHSSLITDVRFSPSMP-RLATSSFDKTV 689 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~------------l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I 689 (903)
...|.++.|++.|..|++.+....++|+|-+....... .++|...++|.+|+|+.+ .|++++.||++
T Consensus 214 ~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dgtl 293 (641)
T KOG0772|consen 214 THQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTL 293 (641)
T ss_pred ccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcE
Confidence 44799999999999888888888999999664443333 347999999999999865 78999999999
Q ss_pred EEEeCCCCCceeEEec-----cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-----EE-eec--CceeEEE
Q 002591 690 RVWDADNPGYSLRTFM-----GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-----RV-FKG--GTAQMRF 756 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~-----~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-----~~-~~~--~~~~v~~ 756 (903)
||||+++..+.+..++ +..-.++.++|++++.. ||+|+.||.|.+|+....... +. +.. .++++.|
T Consensus 294 RiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~-iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F 372 (641)
T KOG0772|consen 294 RIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKL-IAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF 372 (641)
T ss_pred EEEecCCchhheeEEeeccCCCcccCceeeecCCCcch-hhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe
Confidence 9999998655554444 33457899999999875 778999999999998654321 11 122 6889999
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCC-eEEEEecCC--CCCeEEEEEcCCCCEEEEEeC-------CeEEEEECCCCCCcce
Q 002591 757 QPHLGRYLAAAAENVVSILDAETQ-ACRLSLQGH--TKPIDSVCWDPSGELLASVSE-------DSVRVWTVGSGSEGEC 826 (903)
Q Consensus 757 sp~~~~ll~~s~dg~I~i~D~~t~-~~~~~l~~h--~~~V~sl~~spdg~~lasgs~-------d~I~iwdl~s~~~~~~ 826 (903)
+.++++|++-+.|+++++||++.. +++....+- ..+-+.+||+|+.++|++|+. ..+.+||..+. ..
T Consensus 373 S~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~---d~ 449 (641)
T KOG0772|consen 373 SYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTL---DT 449 (641)
T ss_pred ccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccce---ee
Confidence 999999999999999999999986 455555542 345678999999999999863 16999998776 66
Q ss_pred EEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEE
Q 002591 827 VHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELW 861 (903)
Q Consensus 827 i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vw 861 (903)
+..+......|..|.|||.-+.|++++.||.++||
T Consensus 450 v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 450 VYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred EEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 66776668889999999999999999999999887
No 116
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.90 E-value=8.3e-21 Score=203.96 Aligned_cols=255 Identities=19% Similarity=0.312 Sum_probs=205.0
Q ss_pred ccccccCcceeeeeEeecCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEE
Q 002591 604 GMDVSQGFSFKEANSVRAST-SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT 682 (903)
Q Consensus 604 ~~d~~~~~~~~~~~~l~~H~-~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Las 682 (903)
-|++..+.-++....|+.+. .-|.|++|.++|. ++||..+|.|.||+..+.+..+....|.+.|.+++.-.+|.+|-
T Consensus 226 Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS- 303 (626)
T KOG2106|consen 226 FWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS- 303 (626)
T ss_pred EEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-
Confidence 36666665666666776554 5799999999985 67899999999999988888888779999999999999996655
Q ss_pred EeCCCcEEEEeCCCCC----------ce-----------------------------eEEeccCCCceEEEEecCCCCeE
Q 002591 683 SSFDKTVRVWDADNPG----------YS-----------------------------LRTFMGHSASVMSLDFHPNKDDL 723 (903)
Q Consensus 683 gs~Dg~I~IWDl~~~~----------~~-----------------------------~~~~~~h~~~V~sl~fsp~~~~l 723 (903)
|+.|..|..||-+-.. -. ..+..+|.+..+.++.+|+.+ .
T Consensus 304 GgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~-q 382 (626)
T KOG2106|consen 304 GGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKN-Q 382 (626)
T ss_pred cCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChh-h
Confidence 9999999999832100 00 011236888899999999866 4
Q ss_pred EEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCC
Q 002591 724 ICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGE 803 (903)
Q Consensus 724 l~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~ 803 (903)
+++|+.|+.+++|+-..-...+.+..+..++.|+|.+ .++++...|...++|.++...+..-.. ..++++++|+|+|.
T Consensus 383 ~~T~gqdk~v~lW~~~k~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~ 460 (626)
T KOG2106|consen 383 LLTCGQDKHVRLWNDHKLEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGA 460 (626)
T ss_pred eeeccCcceEEEccCCceeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCC
Confidence 5599999999999944444556677889999999998 999999999999999999666655444 89999999999999
Q ss_pred EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 804 LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 804 ~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
+||.|+.| .|+||.+..... +....-+++..+|+.+.|++|+.+|.+-+.|-.|.+|...
T Consensus 461 ~lAvgs~d~~iyiy~Vs~~g~-~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~ 521 (626)
T KOG2106|consen 461 FLAVGSHDNHIYIYRVSANGR-KYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPS 521 (626)
T ss_pred EEEEecCCCeEEEEEECCCCc-EEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccc
Confidence 99999999 999999976533 3333344556899999999999999999999899999543
No 117
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.90 E-value=9.7e-22 Score=199.86 Aligned_cols=229 Identities=17% Similarity=0.304 Sum_probs=188.4
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC--EEEEEeCCCcEEEEeC
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP--RLATSSFDKTVRVWDA 694 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~--~Lasgs~Dg~I~IWDl 694 (903)
+....|.++|.|++|+.||..+++|+.|+.+++||+.++ .+..+..|.++|.++.|-+... .|+|||.|++|+.||+
T Consensus 66 ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~ 144 (347)
T KOG0647|consen 66 KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDT 144 (347)
T ss_pred hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeeccc
Confidence 344569999999999999999999999999999999998 6777889999999999987766 8999999999999999
Q ss_pred CCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-----EEeecCceeEEEecCCCEEEEEEcC
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-----RVFKGGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-----~~~~~~~~~v~~sp~~~~ll~~s~d 769 (903)
+. ...+.++. ..+.|++++.-. .+++.+..+..|.+|+++++... ..++-.+.++++..+...++.|+-+
T Consensus 145 R~-~~pv~t~~-LPeRvYa~Dv~~---pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiE 219 (347)
T KOG0647|consen 145 RS-SNPVATLQ-LPERVYAADVLY---PMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIE 219 (347)
T ss_pred CC-CCeeeeee-ccceeeehhccC---ceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeec
Confidence 97 55666655 567788887653 26778888999999999776422 2234467888888888888999999
Q ss_pred CeEEEEECCCC--eEEEEecCCCC---------CeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCce
Q 002591 770 NVVSILDAETQ--ACRLSLQGHTK---------PIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKF 837 (903)
Q Consensus 770 g~I~i~D~~t~--~~~~~l~~h~~---------~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i 837 (903)
|.+.|..+..+ +.-.+|+.|.. .|++|+|+|....|++++.| ++.+||-... ..++....+..+|
T Consensus 220 Grv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar---~kLk~s~~~~qpI 296 (347)
T KOG0647|consen 220 GRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDAR---TKLKTSETHPQPI 296 (347)
T ss_pred ceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhh---hhhhccCcCCCcc
Confidence 99999988876 55666777763 47889999988888888777 9999998654 4566667788999
Q ss_pred EEEEEeCCCCEEEEEEC
Q 002591 838 HSCVFHPTYPSLLVIGC 854 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~ 854 (903)
+++.|+.+|.+++.+..
T Consensus 297 tcc~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 297 TCCSFNRNGSIFAYALG 313 (347)
T ss_pred ceeEecCCCCEEEEEee
Confidence 99999999998876643
No 118
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.90 E-value=4.4e-23 Score=213.80 Aligned_cols=257 Identities=17% Similarity=0.253 Sum_probs=214.0
Q ss_pred CCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC
Q 002591 599 DAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP 678 (903)
Q Consensus 599 ~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~ 678 (903)
|+.+++|++. .-.+..+|++|.+.|..|++.. ..+++++.|++|+.|.++- ..++++.+ ...+..|.-+..+.
T Consensus 88 DG~VkiWnls---qR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~ 160 (433)
T KOG0268|consen 88 DGEVKIWNLS---QRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNS 160 (433)
T ss_pred CceEEEEehh---hhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccC-Ccceeeec-cccccccccccccc
Confidence 3344444444 4567889999999999999987 6788999999999999865 46666654 34577888888888
Q ss_pred EEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe--ecCceeEEE
Q 002591 679 RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF--KGGTAQMRF 756 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~--~~~~~~v~~ 756 (903)
.++||+.+ |.|||... ..++..+.-..+.|.++.|+|....+|++|+.|+.|.+||++....++.. ....+.++|
T Consensus 161 ~FaTcGe~--i~IWD~~R-~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~Isw 237 (433)
T KOG0268|consen 161 VFATCGEQ--IDIWDEQR-DNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICW 237 (433)
T ss_pred cccccCce--eeeccccc-CCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceec
Confidence 99999865 99999986 67788888888899999999999999999999999999999999877644 456788999
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCC
Q 002591 757 QPHLGRYLAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNG 834 (903)
Q Consensus 757 sp~~~~ll~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~ 834 (903)
+|..-.|+++..|..++.||++.. .++....+|.+.|.++.|+|.|.-|++|+.| +|+||.++.+......++-. -
T Consensus 238 nPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkR--M 315 (433)
T KOG0268|consen 238 NPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKR--M 315 (433)
T ss_pred CccccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhh--h
Confidence 997778888899999999999986 6777888999999999999999999999999 99999998764433332211 3
Q ss_pred CceEEEEEeCCCCEEEEEECCCeEEEEECCCCc
Q 002591 835 NKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK 867 (903)
Q Consensus 835 ~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~ 867 (903)
..|.++.|+-|..+|++|+.|+.|++|.....+
T Consensus 316 q~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 316 QHVFCVKYSMDSKYIISGSDDGNVRLWKAKASE 348 (433)
T ss_pred heeeEEEEeccccEEEecCCCcceeeeecchhh
Confidence 458899999999999999999999999876544
No 119
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=1.2e-22 Score=228.10 Aligned_cols=273 Identities=19% Similarity=0.362 Sum_probs=214.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCC----CceeEEecc---CCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCC
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDT----LKSKTNLEE---HSSLITDVRFSP-SMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t----~~~~~~l~~---h~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWDl~~ 696 (903)
.+.+|...++-..|+.++.. .++||.+.. .++...++. -...+.+|.|.. +.++|||++..|.|.+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk 119 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK 119 (839)
T ss_pred ccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence 45666777887778877754 678887652 222222221 123466788864 456899999999999999986
Q ss_pred --CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCC-CEEEEEEcCC
Q 002591 697 --PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHL-GRYLAAAAEN 770 (903)
Q Consensus 697 --~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~-~~ll~~s~dg 770 (903)
..+.+..|..|+..|.+++|++...++|++|+.||+|++||++..+...++.+ .+..+.|+|.. ..|+++...|
T Consensus 120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG 199 (839)
T KOG0269|consen 120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG 199 (839)
T ss_pred cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence 34556788999999999999999999999999999999999999888777765 46778899876 4566666778
Q ss_pred eEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCE
Q 002591 771 VVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 771 ~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~ 848 (903)
.+.+||++.. ++...+.+|.++|.|+.|+|++.+||+|+.| .|+|||+.+... ..+..+.. ..++.++.|-|...+
T Consensus 200 ~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~-~~~~tInT-iapv~rVkWRP~~~~ 277 (839)
T KOG0269|consen 200 YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA-KPKHTINT-IAPVGRVKWRPARSY 277 (839)
T ss_pred eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc-cceeEEee-cceeeeeeeccCccc
Confidence 9999999976 6778889999999999999999999999999 999999986532 23333322 678999999998876
Q ss_pred EEEEE---CCCeEEEEECCCCcEE--EEccCCCCEEEEEEec-CCCEEEEEecCCcEE
Q 002591 849 LLVIG---CYQSLELWNMSENKTM--TLTAHEGLIAALAVST-ETGYVASASHDKFVK 900 (903)
Q Consensus 849 l~t~s---~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~sp-dg~~LaSgs~DG~I~ 900 (903)
.++.+ .|-.|+|||++..-+- ++..|...|+.++|.. |...|.+++.||+|.
T Consensus 278 hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~ 335 (839)
T KOG0269|consen 278 HLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVL 335 (839)
T ss_pred hhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHH
Confidence 55544 3569999999876654 7889999999999965 456789999999874
No 120
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.89 E-value=8.4e-22 Score=210.33 Aligned_cols=230 Identities=23% Similarity=0.380 Sum_probs=194.2
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCc
Q 002591 620 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGY 699 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~ 699 (903)
++|...|.|++.++||+|||+|+.|..|.||+.++.+.+..+.+|.+.|.+++|-.....|++++.|++|++|+++. ..
T Consensus 199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~-~s 277 (479)
T KOG0299|consen 199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ-LS 277 (479)
T ss_pred ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH-hH
Confidence 48999999999999999999999999999999999999999999999999999999888999999999999999987 56
Q ss_pred eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 700 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 700 ~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
.+.++.+|.+.|..|..... .+++.+|+.|+++++|++.... ..+|.+ .+.+++|. +...|++|+.+|.|.+|+
T Consensus 278 ~vetlyGHqd~v~~IdaL~r-eR~vtVGgrDrT~rlwKi~ees-qlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs 354 (479)
T KOG0299|consen 278 YVETLYGHQDGVLGIDALSR-ERCVTVGGRDRTVRLWKIPEES-QLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWS 354 (479)
T ss_pred HHHHHhCCccceeeechhcc-cceEEeccccceeEEEeccccc-eeeeeCCCCCeeeEEEe-cccceeeccCCceEEEee
Confidence 68899999999999998765 4477678899999999995433 233333 34555655 447899999999999999
Q ss_pred CCCCeEEEEecC-C-----------CCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCC-cceEEEeecCCCceEEEEE
Q 002591 777 AETQACRLSLQG-H-----------TKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSE-GECVHELSCNGNKFHSCVF 842 (903)
Q Consensus 777 ~~t~~~~~~l~~-h-----------~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~-~~~i~~~~~~~~~i~si~~ 842 (903)
+.+.+++++... | ..+|++++..|..+++++|+.+ .|++|-+..+-. ...+..+. -.+.|++++|
T Consensus 355 ~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f 433 (479)
T KOG0299|consen 355 LLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAF 433 (479)
T ss_pred ecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEE
Confidence 999998887542 2 2389999999999999999998 999999987632 34555555 3678999999
Q ss_pred eCCCCEEEEEEC
Q 002591 843 HPTYPSLLVIGC 854 (903)
Q Consensus 843 sp~g~~l~t~s~ 854 (903)
+++|+.|++|..
T Consensus 434 ~~sgk~ivagiG 445 (479)
T KOG0299|consen 434 SNSGKRIVAGIG 445 (479)
T ss_pred ccCCCEEEEecc
Confidence 999997777744
No 121
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=8.9e-24 Score=235.28 Aligned_cols=236 Identities=27% Similarity=0.476 Sum_probs=211.8
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
+.+-.|...|.|+..-..++.+++|+.|..+-||.+.....+..|.+|..+|.||.|+.+..+|++|+.+|+|++||++.
T Consensus 22 ~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDlee 101 (825)
T KOG0267|consen 22 REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEE 101 (825)
T ss_pred hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhh
Confidence 44567999999999978889999999999999999988888888999999999999999999999999999999999997
Q ss_pred CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 697 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 697 ~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
.+.++++.+|...+.++.|+|-+.+ +++++.|+.+++||++..-|.+.
T Consensus 102 -Ak~vrtLtgh~~~~~sv~f~P~~~~-~a~gStdtd~~iwD~Rk~Gc~~~------------------------------ 149 (825)
T KOG0267|consen 102 -AKIVRTLTGHLLNITSVDFHPYGEF-FASGSTDTDLKIWDIRKKGCSHT------------------------------ 149 (825)
T ss_pred -hhhhhhhhccccCcceeeeccceEE-eccccccccceehhhhccCceee------------------------------
Confidence 8889999999999999999999764 47899999999999886555444
Q ss_pred CCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC
Q 002591 777 AETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY 855 (903)
Q Consensus 777 ~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d 855 (903)
+.+|...|.++.|+|+|++++.+++| +++|||+..+ +.+.++..|...+..+.|+|..-.++.|+.|
T Consensus 150 ---------~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~ag---k~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d 217 (825)
T KOG0267|consen 150 ---------YKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAG---KLSKEFKSHEGKVQSLEFHPLEVLLAPGSSD 217 (825)
T ss_pred ---------ecCCcceeEEEeecCCCceeeccCCcceeeeeccccc---ccccccccccccccccccCchhhhhccCCCC
Confidence 34577889999999999999999998 9999999877 7888899999999999999999999999999
Q ss_pred CeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 856 QSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 856 g~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
++|++||+++.+.+ ........|.+++|++++..+++|..+
T Consensus 218 ~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 218 RTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred ceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchh
Confidence 99999999998888 555568899999999999999888654
No 122
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.89 E-value=3.2e-20 Score=202.62 Aligned_cols=263 Identities=13% Similarity=0.091 Sum_probs=194.8
Q ss_pred eeeeEeecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEE-eCCCcEEE
Q 002591 614 KEANSVRASTSKVICCHFSSDGKLL-ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS-SFDKTVRV 691 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~~L-atgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasg-s~Dg~I~I 691 (903)
+.+..+..|. .+.+++|+++++.+ ++++.++.|++||+.+++.+..+..+.. +..++|+|+++.++++ +.|+.|++
T Consensus 22 ~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~ 99 (300)
T TIGR03866 22 EVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTV 99 (300)
T ss_pred ceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEE
Confidence 3455555554 47789999999876 5667889999999999888877765544 5788999999977655 56899999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCC-CcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEE-
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD-GEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAA- 767 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D-g~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s- 767 (903)
||+.+ ...+..+.. ...+.+++|+|++..++ +++.+ ..+.+||.++++...... .....+.|++++..+++++
T Consensus 100 ~d~~~-~~~~~~~~~-~~~~~~~~~~~dg~~l~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 176 (300)
T TIGR03866 100 IDIET-RKVLAEIPV-GVEPEGMAVSPDGKIVV-NTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSE 176 (300)
T ss_pred EECCC-CeEEeEeeC-CCCcceEEECCCCCEEE-EEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcC
Confidence 99987 555555542 34568899999987655 55544 467788999887765432 3456688999999886665
Q ss_pred cCCeEEEEECCCCeEEEEecCCC-----C--CeEEEEEcCCCCEEEEE-eCC-eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 768 AENVVSILDAETQACRLSLQGHT-----K--PIDSVCWDPSGELLASV-SED-SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~~~~l~~h~-----~--~V~sl~~spdg~~lasg-s~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
.++.|++||+++++.+..+..+. . ....++|+|++++++++ +.+ .|.+||++++ +.+..+. +...+.
T Consensus 177 ~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~---~~~~~~~-~~~~~~ 252 (300)
T TIGR03866 177 IGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTY---EVLDYLL-VGQRVW 252 (300)
T ss_pred CCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCC---cEEEEEE-eCCCcc
Confidence 58999999999998777654321 1 23468899999975543 333 8999999875 3333332 345788
Q ss_pred EEEEeCCCCEEEEEE-CCCeEEEEECCCCcEEEEccCCCCEEEEEEec
Q 002591 839 SCVFHPTYPSLLVIG-CYQSLELWNMSENKTMTLTAHEGLIAALAVST 885 (903)
Q Consensus 839 si~~sp~g~~l~t~s-~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~sp 885 (903)
+++|+|++.+|+++. .++.|++||+.+++++.........+.++|+|
T Consensus 253 ~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 300 (300)
T TIGR03866 253 QLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGRLPWGVVVRP 300 (300)
T ss_pred eEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcccccceeEeCC
Confidence 999999999998874 58999999999999874334456678888764
No 123
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.89 E-value=2.7e-21 Score=195.46 Aligned_cols=281 Identities=22% Similarity=0.347 Sum_probs=218.4
Q ss_pred EeecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCc----------eeEE-----eccCCCCeEEEEECCC-CCEE
Q 002591 618 SVRASTSKVICCHFSS-DGKLLATGGHDKKAVLWHTDTLK----------SKTN-----LEEHSSLITDVRFSPS-MPRL 680 (903)
Q Consensus 618 ~l~~H~~~V~~l~fsp-dg~~Latgs~Dg~V~vWd~~t~~----------~~~~-----l~~h~~~V~~l~fspd-g~~L 680 (903)
..+.|.+.|+++.+.+ .|+++++|+.||.|.|||++... .+.. -.+|...|.++.|-|- ...+
T Consensus 38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF 117 (397)
T KOG4283|consen 38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF 117 (397)
T ss_pred eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence 3456999999999988 68899999999999999987422 0110 1368889999999885 4478
Q ss_pred EEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCC--CCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEE
Q 002591 681 ATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN--KDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMR 755 (903)
Q Consensus 681 asgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~--~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~ 755 (903)
.+++.|.+++|||..+ ......|+ ..+.|++-+|+|- ...+|++|..|-.|++.|+.+|.+.+++.+ ++..+.
T Consensus 118 tssSFDhtlKVWDtnT-lQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~ 195 (397)
T KOG4283|consen 118 TSSSFDHTLKVWDTNT-LQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVE 195 (397)
T ss_pred ecccccceEEEeeccc-ceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEE
Confidence 8889999999999998 44555555 5677888888875 356888999999999999999999988876 577899
Q ss_pred EecCCCEEEE-EEcCCeEEEEECCCC-eEEEEec--------------CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 002591 756 FQPHLGRYLA-AAAENVVSILDAETQ-ACRLSLQ--------------GHTKPIDSVCWDPSGELLASVSED-SVRVWTV 818 (903)
Q Consensus 756 ~sp~~~~ll~-~s~dg~I~i~D~~t~-~~~~~l~--------------~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl 818 (903)
|+|...++++ ++.||.|++||++.. .|...+. .|.+.|..++|..++.++++++.| .+++|+.
T Consensus 196 Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~ 275 (397)
T KOG4283|consen 196 WSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM 275 (397)
T ss_pred eccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence 9999987665 566999999999875 3444332 466789999999999999998888 9999999
Q ss_pred CCCCCcceEEEeecCCC----ceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEE
Q 002591 819 GSGSEGECVHELSCNGN----KFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 819 ~s~~~~~~i~~~~~~~~----~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSg 893 (903)
.++.....-..-..|.. .+. +. +-+...++..-.++.+.++++-++..+ .+..|...|.|.++.|+-..+.+|
T Consensus 276 ~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg 353 (397)
T KOG4283|consen 276 ESGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTG 353 (397)
T ss_pred ccCcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhhhcc
Confidence 88754221111111111 111 22 344555666667789999999998877 777899999999999999999999
Q ss_pred ecCCcEEEc
Q 002591 894 SHDKFVKLW 902 (903)
Q Consensus 894 s~DG~I~IW 902 (903)
..|+.|..|
T Consensus 354 ~~d~ni~~w 362 (397)
T KOG4283|consen 354 DMNGNIYMW 362 (397)
T ss_pred ccCCccccc
Confidence 999999988
No 124
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=4.2e-22 Score=202.56 Aligned_cols=256 Identities=20% Similarity=0.332 Sum_probs=213.8
Q ss_pred EEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEe
Q 002591 637 LLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDF 716 (903)
Q Consensus 637 ~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~f 716 (903)
.|++.-.+++++ ...++.+.+|.+.|+.++-......+.+++.|.+.+||.+++ +.|+.++.||.+.|.+|+|
T Consensus 126 rivssFk~~t~~------~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Es-g~CL~~Y~GH~GSVNsikf 198 (481)
T KOG0300|consen 126 RIVSSFKDGTVK------FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLES-GACLATYTGHTGSVNSIKF 198 (481)
T ss_pred hheeeecCCcee------EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecc-ccceeeecccccceeeEEe
Confidence 445555566543 356777899999999999988888999999999999999998 8999999999999999999
Q ss_pred cCCCCeEEEEEeCCCcEEEEEc------CCC--------e----------------------e----eEEeec---Ccee
Q 002591 717 HPNKDDLICSCDGDGEIRYWSI------NNG--------S----------------------C----TRVFKG---GTAQ 753 (903)
Q Consensus 717 sp~~~~ll~sgs~Dg~I~iwDi------~t~--------~----------------------~----~~~~~~---~~~~ 753 (903)
++.+. ++++++.|++..||.. ... + . +..+.+ .+.+
T Consensus 199 h~s~~-L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a 277 (481)
T KOG0300|consen 199 HNSGL-LLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSA 277 (481)
T ss_pred ccccc-eEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEe
Confidence 99755 6779999999999972 110 0 0 011222 2334
Q ss_pred EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeec
Q 002591 754 MRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSC 832 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~ 832 (903)
..|...+..+++++.|.+..+||+++++++..+.+|....+.++-+|..+++++.+.| +.++||++ +....+..+.+
T Consensus 278 ~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFR--eaI~sV~VFQG 355 (481)
T KOG0300|consen 278 CDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFR--EAIQSVAVFQG 355 (481)
T ss_pred hhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccch--hhcceeeeecc
Confidence 4577778899999999999999999999999999999999999999999999999999 99999998 44677888999
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 833 NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 833 ~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|...|+++.|..+.+ +++++.|.+|+|||+++-+.. .....+++++.++++..+.+|+.--++..|+|||
T Consensus 356 HtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfD 426 (481)
T KOG0300|consen 356 HTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFD 426 (481)
T ss_pred cccceeEEEEecCCc-eeecCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEe
Confidence 999999999998765 899999999999999886643 4455678899999998888888888888899987
No 125
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.89 E-value=7.9e-22 Score=217.28 Aligned_cols=274 Identities=23% Similarity=0.309 Sum_probs=208.7
Q ss_pred EEEEcC---CCCEEEEEeCCCcEEEEECCCCce------eEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 628 CCHFSS---DGKLLATGGHDKKAVLWHTDTLKS------KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 628 ~l~fsp---dg~~Latgs~Dg~V~vWd~~t~~~------~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
++.|++ ....||.+.+||.|.++|...... ++.+..|...|.++.|-|....|++++.|.+|++||++. .
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~-s 132 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKT-S 132 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecc-c
Confidence 356655 335899999999999999874322 345568999999999999777999999999999999997 5
Q ss_pred ceeEE--eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-------E---Eeec-----------------
Q 002591 699 YSLRT--FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-------R---VFKG----------------- 749 (903)
Q Consensus 699 ~~~~~--~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-------~---~~~~----------------- 749 (903)
.++.. +.+|...|.++||.+.+..+||+|+.||.|.|||++..... . .+++
T Consensus 133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA 212 (720)
T KOG0321|consen 133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA 212 (720)
T ss_pred eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence 56555 89999999999999999999999999999999999753300 0 0000
Q ss_pred ---Ccee---EEEecCCCEEEEEEc-CCeEEEEECCCCeEEEEe--------cCC---CCCeEEEEEcCCCCEEEEEeCC
Q 002591 750 ---GTAQ---MRFQPHLGRYLAAAA-ENVVSILDAETQACRLSL--------QGH---TKPIDSVCWDPSGELLASVSED 811 (903)
Q Consensus 750 ---~~~~---v~~sp~~~~ll~~s~-dg~I~i~D~~t~~~~~~l--------~~h---~~~V~sl~~spdg~~lasgs~d 811 (903)
.+.. +.+..|...|++++. |+.|+|||+++....... ..| .-.+.+++.+..|.+|++.+.|
T Consensus 213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD 292 (720)
T KOG0321|consen 213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTD 292 (720)
T ss_pred ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecC
Confidence 1112 456677788888877 999999999987554432 223 2357788888888877666667
Q ss_pred -eEEEEECCCCCCcceEEEeecCCC--ceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecC
Q 002591 812 -SVRVWTVGSGSEGECVHELSCNGN--KFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTE 886 (903)
Q Consensus 812 -~I~iwdl~s~~~~~~i~~~~~~~~--~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spd 886 (903)
.|++|++.+... ..+..+.++.. ....-..+|++.+|++|+.|...++|.+...+.- .+.+|.-.|++++|.|.
T Consensus 293 ~sIy~ynm~s~s~-sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS 371 (720)
T KOG0321|consen 293 NSIYFYNMRSLSI-SPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPS 371 (720)
T ss_pred CcEEEEeccccCc-CchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccc
Confidence 999999987532 23333333222 2233357899999999999999999999887654 77899999999999874
Q ss_pred C-CEEEEEecCCcEEEcC
Q 002591 887 T-GYVASASHDKFVKLWK 903 (903)
Q Consensus 887 g-~~LaSgs~DG~I~IWd 903 (903)
. .-++++++|-.++||+
T Consensus 372 ~~t~v~TcSdD~~~kiW~ 389 (720)
T KOG0321|consen 372 ATTPVATCSDDFRVKIWR 389 (720)
T ss_pred cCCCceeeccCcceEEEe
Confidence 3 3477889999999996
No 126
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.89 E-value=5e-21 Score=212.81 Aligned_cols=283 Identities=20% Similarity=0.297 Sum_probs=222.0
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC--ceeEE-----eccCCCCeEEEEECCCCCEEEEEeCCCcE
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL--KSKTN-----LEEHSSLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~--~~~~~-----l~~h~~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
..+.||.+-|+++.|+|.+..|++++.|+++.||.-++. -=+.. ..+........-|++++..+++-+..|..
T Consensus 261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~ 340 (764)
T KOG1063|consen 261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGF 340 (764)
T ss_pred hhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcE
Confidence 345599999999999999999999999999999986643 22222 22345668999999999999999999999
Q ss_pred EEEeCCCCCc--eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEe------ecCceeEEEecCC
Q 002591 690 RVWDADNPGY--SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVF------KGGTAQMRFQPHL 760 (903)
Q Consensus 690 ~IWDl~~~~~--~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~------~~~~~~v~~sp~~ 760 (903)
++|...+... ....+.||.+.|.+++|+|.|+++| +.+.|-+-|+|-.-..+ .-..+ -....++++-+..
T Consensus 341 hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflL-svs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~ 419 (764)
T KOG1063|consen 341 HLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLL-SVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNED 419 (764)
T ss_pred EEEeccCccceeeccccccccccceeeeecCCCCEEE-EeccccceeeecccccccceeeecccccccccceeeehccCC
Confidence 9998443222 2345679999999999999988665 88899999998655111 11111 1235566676666
Q ss_pred CEEEEEEcCCeEEEEECCC-------------------------------------------CeE---------------
Q 002591 761 GRYLAAAAENVVSILDAET-------------------------------------------QAC--------------- 782 (903)
Q Consensus 761 ~~ll~~s~dg~I~i~D~~t-------------------------------------------~~~--------------- 782 (903)
-.|+.++.+..+++|+... +..
T Consensus 420 ~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~ 499 (764)
T KOG1063|consen 420 LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCE 499 (764)
T ss_pred ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchh
Confidence 6777777777888876421 000
Q ss_pred ------------------EEEecCCCCCeEEEEEcCCCCEEEEEeCC------eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 783 ------------------RLSLQGHTKPIDSVCWDPSGELLASVSED------SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 783 ------------------~~~l~~h~~~V~sl~~spdg~~lasgs~d------~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
+.++.+|...|.+++.+|+++++|+++.. .|++|+..+. ..+..+..|.-.|+
T Consensus 500 L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W---~~~~~L~~HsLTVT 576 (764)
T KOG1063|consen 500 LTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANW---LQVQELEGHSLTVT 576 (764)
T ss_pred ccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccch---hhhheecccceEEE
Confidence 01246788899999999999999998854 5999998776 45567888999999
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCcEE-----EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 839 SCVFHPTYPSLLVIGCYQSLELWNMSENKTM-----TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 839 si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-----~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.++|+||+++|++++.|+++.+|...+.... ....|..-|+++.|+|++.+|+|+|.|.+|+||.
T Consensus 577 ~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~ 646 (764)
T KOG1063|consen 577 RLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWE 646 (764)
T ss_pred EEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEe
Confidence 9999999999999999999999988655433 4678999999999999999999999999999994
No 127
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.88 E-value=3.4e-22 Score=213.93 Aligned_cols=259 Identities=17% Similarity=0.291 Sum_probs=215.6
Q ss_pred cCCCCcccccccCcceeeeeEeec--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC--CCceeEEeccCCCCeEEEEE
Q 002591 598 RDAGGRGMDVSQGFSFKEANSVRA--STSKVICCHFSSDGKLLATGGHDKKAVLWHTD--TLKSKTNLEEHSSLITDVRF 673 (903)
Q Consensus 598 ~~~~~~~~d~~~~~~~~~~~~l~~--H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~--t~~~~~~l~~h~~~V~~l~f 673 (903)
..+.+++||+...-...++..+.. ....|++|.+.+||+.|++|++-.+|.|||+. +......+....-.+.+++.
T Consensus 438 GkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~ 517 (705)
T KOG0639|consen 438 GKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI 517 (705)
T ss_pred CCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhc
Confidence 344567788876544455555443 45679999999999999999999999999987 44445555555667889999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE--EeecCc
Q 002591 674 SPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR--VFKGGT 751 (903)
Q Consensus 674 spdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~--~~~~~~ 751 (903)
+||.+.+++++.||.|+|||+.+ ...++.|.+|.+.+.||.++++|.++. ||+-|.+||.||+++++.+. .|...+
T Consensus 518 spDakvcFsccsdGnI~vwDLhn-q~~VrqfqGhtDGascIdis~dGtklW-TGGlDntvRcWDlregrqlqqhdF~SQI 595 (705)
T KOG0639|consen 518 SPDAKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISKDGTKLW-TGGLDNTVRCWDLREGRQLQQHDFSSQI 595 (705)
T ss_pred CCccceeeeeccCCcEEEEEccc-ceeeecccCCCCCceeEEecCCCceee-cCCCccceeehhhhhhhhhhhhhhhhhh
Confidence 99999999999999999999998 788999999999999999999987665 99999999999999988654 566778
Q ss_pred eeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEe
Q 002591 752 AQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHEL 830 (903)
Q Consensus 752 ~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~ 830 (903)
.++.++|.+.++++|-..+.|.|....... .+.+.-|++.|.++.|.+.|+++++.+.| .+..|..--+ ..+...
T Consensus 596 fSLg~cP~~dWlavGMens~vevlh~skp~-kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyG---asiFqs 671 (705)
T KOG0639|consen 596 FSLGYCPTGDWLAVGMENSNVEVLHTSKPE-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG---ASIFQS 671 (705)
T ss_pred eecccCCCccceeeecccCcEEEEecCCcc-ceeecccccEEEEEEecccCceeeecCchhhhhhccCccc---cceeec
Confidence 889999999999999999999998876543 44566699999999999999999999998 8999998766 333333
Q ss_pred ecCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 002591 831 SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 831 ~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl 863 (903)
+. ...|.+|.++.|.++|++|+.|+...||.+
T Consensus 672 kE-~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 672 KE-SSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred cc-cCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 32 668999999999999999999998888865
No 128
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.88 E-value=4.6e-20 Score=198.31 Aligned_cols=289 Identities=16% Similarity=0.193 Sum_probs=218.9
Q ss_pred CCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE---eccC-CCCeEEEEECC
Q 002591 600 AGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN---LEEH-SSLITDVRFSP 675 (903)
Q Consensus 600 ~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~---l~~h-~~~V~~l~fsp 675 (903)
...-+|++.++...-++ +...+.|..+.|+|.+..|+.....+.+.+|+.+.+...++ ++.+ ...|.|++|.+
T Consensus 180 h~lSVWdWqk~~~~~~v---k~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~e 256 (626)
T KOG2106|consen 180 HMLSVWDWQKKAKLGPV---KTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLE 256 (626)
T ss_pred cccchhhchhhhccCcc---eeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcC
Confidence 34456777766444443 44577899999999776555555678999999987765554 3332 36799999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee-----------e
Q 002591 676 SMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC-----------T 744 (903)
Q Consensus 676 dg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~-----------~ 744 (903)
+| -+++|..+|.|.||+..+ .+..+....|.+.|.+++...+|. ++ +|+.|..|..||-.-.+. +
T Consensus 257 ng-dviTgDS~G~i~Iw~~~~-~~~~k~~~aH~ggv~~L~~lr~Gt-ll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~i 332 (626)
T KOG2106|consen 257 NG-DVITGDSGGNILIWSKGT-NRISKQVHAHDGGVFSLCMLRDGT-LL-SGGKDRKIILWDDNYRKLRETELPEQFGPI 332 (626)
T ss_pred CC-CEEeecCCceEEEEeCCC-ceEEeEeeecCCceEEEEEecCcc-Ee-ecCccceEEeccccccccccccCchhcCCe
Confidence 88 577999999999999987 555565559999999999998864 44 799999999999321110 1
Q ss_pred EEe-e--------------------c-----------CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCC
Q 002591 745 RVF-K--------------------G-----------GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKP 792 (903)
Q Consensus 745 ~~~-~--------------------~-----------~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~ 792 (903)
+++ + . ..-.++.+|..+.+++++.|+.+++|+ ..+++.+.. ...+
T Consensus 333 Rtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~~-~~d~ 409 (626)
T KOG2106|consen 333 RTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTKI-IEDP 409 (626)
T ss_pred eEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEEE-ecCc
Confidence 110 0 0 112356778889999999999999999 444444333 4578
Q ss_pred eEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--
Q 002591 793 IDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-- 869 (903)
Q Consensus 793 V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-- 869 (903)
+.|+.|+|.| .++.|... ...+.|.++. ..+..... ..++..+.|+|+|.+|++|+.|+.|+||.+..+...
T Consensus 410 ~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~---~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~ 484 (626)
T KOG2106|consen 410 AECADFHPSG-VVAVGTATGRWFVLDTETQ---DLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYS 484 (626)
T ss_pred eeEeeccCcc-eEEEeeccceEEEEecccc---eeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEE
Confidence 9999999999 88888777 8889998773 34444444 888999999999999999999999999998765433
Q ss_pred EE-ccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 870 TL-TAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 870 ~~-~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.. .-+..+|+.+.|++|+.+|.+-+-|-.|..|+
T Consensus 485 r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~ 519 (626)
T KOG2106|consen 485 RVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWK 519 (626)
T ss_pred EeeeecCceeEEeeecCCCceEEeccCceEEEEEc
Confidence 22 23448999999999999999999999999984
No 129
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=8.2e-21 Score=217.31 Aligned_cols=274 Identities=14% Similarity=0.242 Sum_probs=215.1
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-ceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 620 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL-KSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~-~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
.+|+..-+.|+|.++|++|++++.||.|++|+.... +.-.++..+...|.+++...+ +|++|+.+++|.+|.+.+ +
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~--~f~~~s~~~tv~~y~fps-~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSN--HFLTGSEQNTVLRYKFPS-G 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeeccc--ceEEeeccceEEEeeCCC-C
Confidence 369999999999999999999999999999997655 444455558888888887544 999999999999999987 4
Q ss_pred ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe---ecCceeEEEecCCCEEEEEEcCCeEEEE
Q 002591 699 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF---KGGTAQMRFQPHLGRYLAAAAENVVSIL 775 (903)
Q Consensus 699 ~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~---~~~~~~v~~sp~~~~ll~~s~dg~I~i~ 775 (903)
..-..+...+-++.+++|+.+|. +++.|+.|-.|++.+.......+++ ++.+.++.|+|.++.+++.+.||.|+||
T Consensus 87 ~~~~iL~Rftlp~r~~~v~g~g~-~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw 165 (933)
T KOG1274|consen 87 EEDTILARFTLPIRDLAVSGSGK-MIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIW 165 (933)
T ss_pred CccceeeeeeccceEEEEecCCc-EEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEE
Confidence 44445555667899999998876 5568999999999999887655554 5678899999999999999999999999
Q ss_pred ECCCCeEEEEecCC--------CCCeEEEEEcCCCC-EEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC
Q 002591 776 DAETQACRLSLQGH--------TKPIDSVCWDPSGE-LLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 776 D~~t~~~~~~l~~h--------~~~V~sl~~spdg~-~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g 846 (903)
|+.++.+..++.+- ...+..++|+|++. +++.+.++.|++|+.........+. .+.+...+..+.|+|+|
T Consensus 166 ~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr-~~~~ss~~~~~~wsPnG 244 (933)
T KOG1274|consen 166 DLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLR-DKLSSSKFSDLQWSPNG 244 (933)
T ss_pred EcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeec-ccccccceEEEEEcCCC
Confidence 99999887766531 34567789999965 5555555599999998774322222 22234458999999999
Q ss_pred CEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 847 PSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 847 ~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
.||++++.+|.|.|||+.+-+. ......|++++|.|+..-|-.-..-|...+
T Consensus 245 ~YiAAs~~~g~I~vWnv~t~~~---~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~ 296 (933)
T KOG1274|consen 245 KYIAASTLDGQILVWNVDTHER---HEFKRAVCCEAWKPNANAITLITALGTLGV 296 (933)
T ss_pred cEEeeeccCCcEEEEecccchh---ccccceeEEEecCCCCCeeEEEeecccccc
Confidence 9999999999999999998222 344568999999998876554444444433
No 130
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=2.1e-21 Score=207.77 Aligned_cols=228 Identities=21% Similarity=0.269 Sum_probs=196.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC-----
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN----- 696 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~----- 696 (903)
-.++|.|++-+|+|.+|+.|+..|.|++|.+.+|..+..+..|-..|+|+.|+.||.+|++|+.||.|.+|++..
T Consensus 80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~ 159 (476)
T KOG0646|consen 80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD 159 (476)
T ss_pred cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc
Confidence 367899999999999999998999999999999999999999999999999999999999999999999998742
Q ss_pred ---CCceeEEeccCCCceEEEEecCCC-CeEEEEEeCCCcEEEEEcCCCeeeEEe--ecCceeEEEecCCCEEEEEEcCC
Q 002591 697 ---PGYSLRTFMGHSASVMSLDFHPNK-DDLICSCDGDGEIRYWSINNGSCTRVF--KGGTAQMRFQPHLGRYLAAAAEN 770 (903)
Q Consensus 697 ---~~~~~~~~~~h~~~V~sl~fsp~~-~~ll~sgs~Dg~I~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ll~~s~dg 770 (903)
.-++++.|..|+-+|+++...+.+ +..++|++.|.+|++||+..+..+..+ ...+.++..+|.+..+++|+.+|
T Consensus 160 ~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G 239 (476)
T KOG0646|consen 160 NDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEG 239 (476)
T ss_pred cCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcc
Confidence 235688999999999999987652 335669999999999999999987654 45778999999999999999999
Q ss_pred eEEEEECCCC----------------eEEEEecCCCC--CeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEee
Q 002591 771 VVSILDAETQ----------------ACRLSLQGHTK--PIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELS 831 (903)
Q Consensus 771 ~I~i~D~~t~----------------~~~~~l~~h~~--~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~ 831 (903)
.|.+.++... ..+..+.+|.. .|+|++++-||.+|++|+.| .|+|||+.+. .+++.+.
T Consensus 240 ~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~---Q~iRtl~ 316 (476)
T KOG0646|consen 240 KIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSK---QCIRTLQ 316 (476)
T ss_pred eEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchH---HHHHHHh
Confidence 9999876542 34556778888 99999999999999999999 9999999876 6777666
Q ss_pred cCCCceEEEEEeCCCCEEEEE
Q 002591 832 CNGNKFHSCVFHPTYPSLLVI 852 (903)
Q Consensus 832 ~~~~~i~si~~sp~g~~l~t~ 852 (903)
...++|+.+.+.|-.+.++.+
T Consensus 317 ~~kgpVtnL~i~~~~~~~~l~ 337 (476)
T KOG0646|consen 317 TSKGPVTNLQINPLERGIILF 337 (476)
T ss_pred hhccccceeEeeccccceecc
Confidence 567888888887765544443
No 131
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=1e-19 Score=202.44 Aligned_cols=353 Identities=14% Similarity=0.170 Sum_probs=243.1
Q ss_pred ceEEEEeCCCcee---ccCCCeeeeCCcchhhhhhccccccCCCCCceEEeeec-CCCCCcCCCCcccccccCcceeeee
Q 002591 542 PLMMFGTDGAGTL---TSPSNQLWDDKDLELRADMDRLVEDGSLDDNVESFLSH-DDTDPRDAGGRGMDVSQGFSFKEAN 617 (903)
Q Consensus 542 ~~i~~s~dg~~~~---~~~~~~lWd~~~~~~~~~~~~~~~~gs~d~~v~~~~~~-d~~~~~~~~~~~~d~~~~~~~~~~~ 617 (903)
.+++|+.+..-++ +++.++||++...=+ ....-.|..|..++..+.. .......+....+..++.++++.+.
T Consensus 29 ~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~----~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~ 104 (691)
T KOG2048|consen 29 VSLAYSHKSNQLAVSRTDGNIEIWNLSNNWF----LEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKY 104 (691)
T ss_pred EEEEEeccCCceeeeccCCcEEEEccCCCce----eeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeE
Confidence 3455555544332 377889999987422 2223345677888876544 3333333333333444445778888
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeE--EeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKT--NLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD 695 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~--~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~ 695 (903)
.+....+.|++++.+|.++.++.|++||.+++++...++... .|...++.|.+|+|++++..|++|+.||.|++||+.
T Consensus 105 ~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~ 184 (691)
T KOG2048|consen 105 NIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVK 184 (691)
T ss_pred EecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcC
Confidence 888999999999999999999999999988888877665543 344567899999999999999999999999999998
Q ss_pred CCCceeE------Eec-cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe---ecCceeEEEecCCCEEEE
Q 002591 696 NPGYSLR------TFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF---KGGTAQMRFQPHLGRYLA 765 (903)
Q Consensus 696 ~~~~~~~------~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~---~~~~~~v~~sp~~~~ll~ 765 (903)
....... .+. +...-|+++.|..++ .|++|+..|+|.+||...+..+..+ ..++.+++..++++.+++
T Consensus 185 ~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfs 262 (691)
T KOG2048|consen 185 SGQTLHIITMQLDRLSKREPTIVWSVLFLRDS--TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFS 262 (691)
T ss_pred CCceEEEeeecccccccCCceEEEEEEEeecC--cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEE
Confidence 7433220 111 134468888888654 6779999999999999999877655 467889999999999999
Q ss_pred EEcCCeEEEEECCCCeE----EEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCC--------------------
Q 002591 766 AAAENVVSILDAETQAC----RLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGS-------------------- 820 (903)
Q Consensus 766 ~s~dg~I~i~D~~t~~~----~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s-------------------- 820 (903)
++.|+.|..|...+.+. ......|...|.+++..++ .+++|+.| .+.+-..+.
T Consensus 263 aGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~ 340 (691)
T KOG2048|consen 263 AGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSV 340 (691)
T ss_pred ccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEEccccccCchhhhccccccccceeec
Confidence 99999999888776633 2223457788888887754 66666666 444433322
Q ss_pred ----------------------C------CCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC-------
Q 002591 821 ----------------------G------SEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSE------- 865 (903)
Q Consensus 821 ----------------------~------~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~------- 865 (903)
. .....++........|.+.+.+|+|..|+.+... .++||.+..
T Consensus 341 a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~-~~~iy~L~~~~~vk~~ 419 (691)
T KOG2048|consen 341 APENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLFTKEKENISCAAISPDGNLIAISTVS-RTKIYRLQPDPNVKVI 419 (691)
T ss_pred CccceEEEEeccccccceeccCcccccccChhhheeeecCCccceeeeccCCCCCEEEEeecc-ceEEEEeccCcceeEE
Confidence 1 0001111122224457888999999988877621 122222211
Q ss_pred -----------------------------------------CcEE-----EEccCCCCEEEEEEecCCCEEEEEecCCcE
Q 002591 866 -----------------------------------------NKTM-----TLTAHEGLIAALAVSTETGYVASASHDKFV 899 (903)
Q Consensus 866 -----------------------------------------~~~~-----~~~~h~~~V~sl~~spdg~~LaSgs~DG~I 899 (903)
.... .-.+....|+.+..+++|.|||+.+.+|.|
T Consensus 420 ~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I 499 (691)
T KOG2048|consen 420 NVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQI 499 (691)
T ss_pred EeccchhhhccceeeEEEecCceEEEEecccceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceE
Confidence 1000 001234678999999999999999999999
Q ss_pred EEcC
Q 002591 900 KLWK 903 (903)
Q Consensus 900 ~IWd 903 (903)
.+|+
T Consensus 500 ~v~n 503 (691)
T KOG2048|consen 500 FVYN 503 (691)
T ss_pred EEEE
Confidence 9996
No 132
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=6.3e-20 Score=204.10 Aligned_cols=275 Identities=15% Similarity=0.227 Sum_probs=226.7
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEeccC-CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 619 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT-LKSKTNLEEH-SSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 619 l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t-~~~~~~l~~h-~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
+.--...|+|+||+.+.+.||.+-.||.|.||++.. .-+...+.++ ...|.+|+|+ ++..|++.+.+|.|.-||+.+
T Consensus 21 ~d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~ 99 (691)
T KOG2048|consen 21 VDYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHT 99 (691)
T ss_pred EeeeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEeccc
Confidence 334567899999999999999999999999999884 4556667665 4679999999 556888899999999999998
Q ss_pred CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe-----ecCceeEEEecCCCEEEEEEcCCe
Q 002591 697 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF-----KGGTAQMRFQPHLGRYLAAAAENV 771 (903)
Q Consensus 697 ~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~-----~~~~~~v~~sp~~~~ll~~s~dg~ 771 (903)
.+....+....+.|++++.+|.+. .++.|++||.++++++..++..... ++.+.++.|.+++.+++.|+.||.
T Consensus 100 -lk~~~~~d~~gg~IWsiai~p~~~-~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~ 177 (691)
T KOG2048|consen 100 -LKQKYNIDSNGGAIWSIAINPENT-ILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGV 177 (691)
T ss_pred -CceeEEecCCCcceeEEEeCCccc-eEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCce
Confidence 778888888899999999999876 5558888998888888888755432 356788999999999999999999
Q ss_pred EEEEECCCCeEEEEec-------C-CCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEe
Q 002591 772 VSILDAETQACRLSLQ-------G-HTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFH 843 (903)
Q Consensus 772 I~i~D~~t~~~~~~l~-------~-h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s 843 (903)
|++||+.++..++... . ...-|+++.|-.++.++..-+.++|.+||...+ ..+..+.+|...|.+++..
T Consensus 178 Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~g---TLiqS~~~h~adVl~Lav~ 254 (691)
T KOG2048|consen 178 IRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFG---TLIQSHSCHDADVLALAVA 254 (691)
T ss_pred EEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCc---chhhhhhhhhcceeEEEEc
Confidence 9999999997766221 1 233478888886655444444559999999877 6778888899999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCcE--E---EEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 844 PTYPSLLVIGCYQSLELWNMSENKT--M---TLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vwdl~~~~~--~---~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
++++++++++.|+.|..|...+++. + ....|...|.+++..++ .|++|+.|..+.+
T Consensus 255 ~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i 315 (691)
T KOG2048|consen 255 DNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAI 315 (691)
T ss_pred CCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc--eEEecceeeEEEE
Confidence 9999999999999999998877744 1 45578999999999877 8999999998865
No 133
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.87 E-value=1e-20 Score=202.50 Aligned_cols=216 Identities=20% Similarity=0.390 Sum_probs=181.2
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCC-------ceeEEeccCCCCeEEEEECCCC-CEEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTL-------KSKTNLEEHSSLITDVRFSPSM-PRLAT 682 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t~-------~~~~~l~~h~~~V~~l~fspdg-~~Las 682 (903)
.+.+-.+|++|.+.-+.++|++.-. +|++|+.|++|++||+... .....+.+|...|.+++|++-. .+|++
T Consensus 166 ~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~s 245 (422)
T KOG0264|consen 166 ECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGS 245 (422)
T ss_pred cCCCceEEEeecccccccccccccceeEeeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhhee
Confidence 3455668899999889999998543 8999999999999998732 3456688999999999999864 47888
Q ss_pred EeCCCcEEEEeCCC-CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCC
Q 002591 683 SSFDKTVRVWDADN-PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLG 761 (903)
Q Consensus 683 gs~Dg~I~IWDl~~-~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~ 761 (903)
++.|+.+.|||+++ ..++.....+|...|.|++|+|.+..+||||+.|++|++||+|+..
T Consensus 246 v~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~------------------- 306 (422)
T KOG0264|consen 246 VGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLN------------------- 306 (422)
T ss_pred ecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcc-------------------
Confidence 99999999999995 3667788889999999999999999999999999999999998653
Q ss_pred EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCC-----------CcceEE
Q 002591 762 RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGS-----------EGECVH 828 (903)
Q Consensus 762 ~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~-----------~~~~i~ 828 (903)
++++++.+|...|.+|.|+|... +|++++.| .+.|||+..-. ..+.+.
T Consensus 307 -------------------~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF 367 (422)
T KOG0264|consen 307 -------------------KPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLF 367 (422)
T ss_pred -------------------cCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeE
Confidence 24556788999999999999765 88888888 99999997542 234567
Q ss_pred EeecCCCceEEEEEeCCCCEEE-EEECCCeEEEEECCC
Q 002591 829 ELSCNGNKFHSCVFHPTYPSLL-VIGCYQSLELWNMSE 865 (903)
Q Consensus 829 ~~~~~~~~i~si~~sp~g~~l~-t~s~dg~I~vwdl~~ 865 (903)
...+|...|..+.|+|+...++ +++.|+.+.||.+..
T Consensus 368 ~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 368 IHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred EecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 7788999999999999988754 567788999999864
No 134
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=2.2e-20 Score=213.82 Aligned_cols=238 Identities=17% Similarity=0.269 Sum_probs=202.2
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe
Q 002591 663 EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 742 (903)
Q Consensus 663 ~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~ 742 (903)
.|....+.|+|.++|++|++++.||.|++|+..+....-.++..+...|.+++...+ .|++|+.+++|.+|.+..+.
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~---~f~~~s~~~tv~~y~fps~~ 87 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSN---HFLTGSEQNTVLRYKFPSGE 87 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeeccc---ceEEeeccceEEEeeCCCCC
Confidence 688889999999999999999999999999987753444455557888888887633 56699999999999998765
Q ss_pred ---eeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 002591 743 ---CTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTV 818 (903)
Q Consensus 743 ---~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl 818 (903)
.+..|..+..+++++.+|..+++|+.|-.|++.++.+......+++|..+|.+|.|+|.+++||+.+.| .|+|||+
T Consensus 88 ~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~ 167 (933)
T KOG1274|consen 88 EDTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDL 167 (933)
T ss_pred ccceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEc
Confidence 567788899999999999999999999999999999999999999999999999999999999999888 9999999
Q ss_pred CCCCCcceEEEeec----C-CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EE--ccCCCCEEEEEEecCCCEE
Q 002591 819 GSGSEGECVHELSC----N-GNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TL--TAHEGLIAALAVSTETGYV 890 (903)
Q Consensus 819 ~s~~~~~~i~~~~~----~-~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~--~~h~~~V~sl~~spdg~~L 890 (903)
.++.....+..+.. . ...+..++|+|++..|++.+.|+.|++|+..+.+.. .+ ..+...+.++.|+|+|+||
T Consensus 168 ~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~Yi 247 (933)
T KOG1274|consen 168 QDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYI 247 (933)
T ss_pred ccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEE
Confidence 88743322222111 1 334677899999999999999999999999998876 33 3345559999999999999
Q ss_pred EEEecCCcEEEcC
Q 002591 891 ASASHDKFVKLWK 903 (903)
Q Consensus 891 aSgs~DG~I~IWd 903 (903)
|+++.||.|.|||
T Consensus 248 AAs~~~g~I~vWn 260 (933)
T KOG1274|consen 248 AASTLDGQILVWN 260 (933)
T ss_pred eeeccCCcEEEEe
Confidence 9999999999997
No 135
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=4.5e-20 Score=188.76 Aligned_cols=223 Identities=18% Similarity=0.316 Sum_probs=183.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
|..++.+++|.++ ..+++|+.||.|+++|+.++. ...+-.|...|.||.+++....+++|++|++|++||.+. ....
T Consensus 53 ~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~-~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~-~~~~ 129 (323)
T KOG1036|consen 53 HGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGN-EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN-KVVV 129 (323)
T ss_pred cCCceeeeeccCC-ceEEEeccCceEEEEEecCCc-ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccc-cccc
Confidence 7889999999874 478999999999999998765 445668999999999999989999999999999999996 4444
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-----EEeecCceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-----RVFKGGTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-----~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
..+. ....|.++... ++ .|++|..|..|.+||+++.... ..++-.+.++++.|.+.-+++++-||.|.+=.
T Consensus 130 ~~~d-~~kkVy~~~v~--g~-~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~ 205 (323)
T KOG1036|consen 130 GTFD-QGKKVYCMDVS--GN-RLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEY 205 (323)
T ss_pred cccc-cCceEEEEecc--CC-EEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEc
Confidence 4444 34489999886 33 4557888999999999986532 34566788999999888999999999998876
Q ss_pred CCCC----eEEEEecCCCC---------CeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEE
Q 002591 777 AETQ----ACRLSLQGHTK---------PIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVF 842 (903)
Q Consensus 777 ~~t~----~~~~~l~~h~~---------~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~ 842 (903)
++.. +..+.|+.|.. +|++|+|+|-...|+||+.| .|.+||+.+. +.+..+......|.+++|
T Consensus 206 ~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~r---Krl~q~~~~~~SI~slsf 282 (323)
T KOG1036|consen 206 FDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLFNR---KRLKQLAKYETSISSLSF 282 (323)
T ss_pred cCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCcch---hhhhhccCCCCceEEEEe
Confidence 6655 55666777753 69999999998899999999 9999999877 445555555678999999
Q ss_pred eCCCCEEEEEEC
Q 002591 843 HPTYPSLLVIGC 854 (903)
Q Consensus 843 sp~g~~l~t~s~ 854 (903)
+.+|..||+++.
T Consensus 283 s~dG~~LAia~s 294 (323)
T KOG1036|consen 283 SMDGSLLAIASS 294 (323)
T ss_pred ccCCCeEEEEec
Confidence 999999999875
No 136
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.87 E-value=1.9e-20 Score=199.68 Aligned_cols=292 Identities=17% Similarity=0.284 Sum_probs=216.0
Q ss_pred CcceeeeeEeecCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEECC----CCceeEEeccCCCCeEEEEECCCCC-EEEE
Q 002591 610 GFSFKEANSVRASTSKVICCHFSSDG--KLLATGGHDKKAVLWHTD----TLKSKTNLEEHSSLITDVRFSPSMP-RLAT 682 (903)
Q Consensus 610 ~~~~~~~~~l~~H~~~V~~l~fspdg--~~Latgs~Dg~V~vWd~~----t~~~~~~l~~h~~~V~~l~fspdg~-~Las 682 (903)
...+.....++-|.++|+|++|+|.. +++|+|..-|.|-+||+. ....+..+..|..+|.+|.|+|... .+++
T Consensus 173 l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~s 252 (498)
T KOG4328|consen 173 LDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYS 252 (498)
T ss_pred cccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheee
Confidence 34667777888999999999999965 488999999999999994 3345667889999999999999654 7999
Q ss_pred EeCCCcEEEEeCCCCC-ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee----eEEeecCceeEEEe
Q 002591 683 SSFDKTVRVWDADNPG-YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC----TRVFKGGTAQMRFQ 757 (903)
Q Consensus 683 gs~Dg~I~IWDl~~~~-~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~----~~~~~~~~~~v~~s 757 (903)
.|+||+|++-|+++.- ..+..+......+.++.|+.+...++ .++.=|...+||.+++.. ++..+..+..++++
T Consensus 253 sSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl-~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~N 331 (498)
T KOG4328|consen 253 SSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVL-FGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALN 331 (498)
T ss_pred eccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEE-EeecccceEEEEeecCCccchhhhhhhcccceeecC
Confidence 9999999999998621 12223333445677788887766665 666667999999998653 33444578889999
Q ss_pred cCCCE-EEEEEcCCeEEEEECCCCe----EEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC-CCcceEEEe
Q 002591 758 PHLGR-YLAAAAENVVSILDAETQA----CRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG-SEGECVHEL 830 (903)
Q Consensus 758 p~~~~-ll~~s~dg~I~i~D~~t~~----~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~-~~~~~i~~~ 830 (903)
|-..+ +++++.|++++|||++... ++.....|...|.+++|+|++-.|++.+.| .|+|||..-. ........+
T Consensus 332 P~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I 411 (498)
T KOG4328|consen 332 PVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTI 411 (498)
T ss_pred CCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCcccee
Confidence 98865 5566779999999998642 234445699999999999987778888888 9999998411 111111111
Q ss_pred e---cCCC--ceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCC-CCEEEE-EEecCCC-EEEEEecCCcEEE
Q 002591 831 S---CNGN--KFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHE-GLIAAL-AVSTETG-YVASASHDKFVKL 901 (903)
Q Consensus 831 ~---~~~~--~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~-~~V~sl-~~spdg~-~LaSgs~DG~I~I 901 (903)
. .+.. .....+|.|+..+|+++-.-..|.|||-..++.+ .+.... ..|.++ .|+|-+. +++.++..|.|+|
T Consensus 412 ~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~v 491 (498)
T KOG4328|consen 412 PHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYV 491 (498)
T ss_pred eccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEE
Confidence 1 1111 2345689999999999999999999999998865 433332 255554 8899887 4555556888998
Q ss_pred c
Q 002591 902 W 902 (903)
Q Consensus 902 W 902 (903)
|
T Consensus 492 f 492 (498)
T KOG4328|consen 492 F 492 (498)
T ss_pred E
Confidence 8
No 137
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.87 E-value=1.2e-20 Score=196.68 Aligned_cols=245 Identities=22% Similarity=0.438 Sum_probs=196.6
Q ss_pred ecCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEECCC----------------CceeEEeccCCCCeEEEEECCCCC-EE
Q 002591 620 RASTSKVICCHFSSDG--KLLATGGHDKKAVLWHTDT----------------LKSKTNLEEHSSLITDVRFSPSMP-RL 680 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg--~~Latgs~Dg~V~vWd~~t----------------~~~~~~l~~h~~~V~~l~fspdg~-~L 680 (903)
-.|.+.|+.+..++-+ .+.|+-+..|.|.|||+.. .+++.++.+|...-..|+|||-.. .|
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 3688888888887755 4666677889999999742 356788899999999999999433 58
Q ss_pred EEEeCCCcEEEEeCCCCCcee--EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEec
Q 002591 681 ATSSFDKTVRVWDADNPGYSL--RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQP 758 (903)
Q Consensus 681 asgs~Dg~I~IWDl~~~~~~~--~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp 758 (903)
++|..-+.|++|...++...+ +.|.+|+..|-.|+|+|....+|++|+.||+|+|||++.+....
T Consensus 228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~------------- 294 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKA------------- 294 (440)
T ss_pred ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccc-------------
Confidence 888888899999998754433 46778999999999999999999999999999999999874211
Q ss_pred CCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCce
Q 002591 759 HLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKF 837 (903)
Q Consensus 759 ~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i 837 (903)
++ ..+.|.+.|+.|.|+.+..+|++|++| +++|||++..+....+..++-|..+|
T Consensus 295 -----------------------~~-~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pI 350 (440)
T KOG0302|consen 295 -----------------------AV-STKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPI 350 (440)
T ss_pred -----------------------ee-EeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCe
Confidence 11 125688999999999988899999999 99999999988888999999999999
Q ss_pred EEEEEeCC-CCEEEEEECCCeEEEEECCCCcE-----------------EEEccC--CCCEEEEEEecC-CCEEEEEecC
Q 002591 838 HSCVFHPT-YPSLLVIGCYQSLELWNMSENKT-----------------MTLTAH--EGLIAALAVSTE-TGYVASASHD 896 (903)
Q Consensus 838 ~si~~sp~-g~~l~t~s~dg~I~vwdl~~~~~-----------------~~~~~h--~~~V~sl~~spd-g~~LaSgs~D 896 (903)
+++.|+|. ...|++++.|..|.|||+....- ..+..| ...|..+.|++. -.+|++.+.|
T Consensus 351 tsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~d 430 (440)
T KOG0302|consen 351 TSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAID 430 (440)
T ss_pred eEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEeccc
Confidence 99999995 45678888999999999864321 022234 456888999874 3588888889
Q ss_pred CcEEEc
Q 002591 897 KFVKLW 902 (903)
Q Consensus 897 G~I~IW 902 (903)
|. .||
T Consensus 431 Gf-nVf 435 (440)
T KOG0302|consen 431 GF-NVF 435 (440)
T ss_pred ce-eEE
Confidence 84 344
No 138
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.86 E-value=9.8e-21 Score=202.69 Aligned_cols=257 Identities=17% Similarity=0.248 Sum_probs=202.6
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEECCC--CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 625 KVICCHFSSDGK-LLATGGHDKKAVLWHTDT--LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 625 ~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t--~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
.|.+++|+.... .+|+.+.|+.|++|.-.. ++.-..-+...+.-.||+......|+++|+..++|+|||++. ..+.
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~-kl~h 114 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRA-KLIH 114 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHH-HHHh
Confidence 499999988764 333445788899997432 222222122222344555555558999999999999999996 7788
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC----ceeEEEecCCCEEEE-EEcCCeEEEEE
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG----TAQMRFQPHLGRYLA-AAAENVVSILD 776 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~----~~~v~~sp~~~~ll~-~s~dg~I~i~D 776 (903)
+.+++|.+.|+++.|..... +||+++..|.|.|..+.++.....|..+ +.-+.|++....++. ++.+|.|.+||
T Consensus 115 r~lkdh~stvt~v~YN~~De-yiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwD 193 (673)
T KOG4378|consen 115 RFLKDHQSTVTYVDYNNTDE-YIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWD 193 (673)
T ss_pred hhccCCcceeEEEEecCCcc-eeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEe
Confidence 99999999999999987744 6779999999999999998877777643 345788988876655 55679999999
Q ss_pred CCCCeEEEEe-cCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEE
Q 002591 777 AETQACRLSL-QGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIG 853 (903)
Q Consensus 777 ~~t~~~~~~l-~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s 853 (903)
+....+++.+ +.|..+...|||+|... +|++.+.| .|.+||++......++.. ..++.+++|.++|.+|++|.
T Consensus 194 v~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y----~~Plstvaf~~~G~~L~aG~ 269 (673)
T KOG4378|consen 194 VQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY----SHPLSTVAFSECGTYLCAGN 269 (673)
T ss_pred ccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeee----cCCcceeeecCCceEEEeec
Confidence 9988777655 46999999999999665 88899999 999999997654444443 77899999999999999999
Q ss_pred CCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCC
Q 002591 854 CYQSLELWNMSENKTM--TLTAHEGLIAALAVSTET 887 (903)
Q Consensus 854 ~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg 887 (903)
..|.|+.||++..+.- .+.+|...|++++|-+.-
T Consensus 270 s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 270 SKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred CCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 9999999999877643 778999999999997754
No 139
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=2.5e-20 Score=199.58 Aligned_cols=232 Identities=17% Similarity=0.254 Sum_probs=189.0
Q ss_pred CEEEEEeC-CCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEE
Q 002591 636 KLLATGGH-DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 714 (903)
Q Consensus 636 ~~Latgs~-Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl 714 (903)
.+++++.. ...|.+|.+...........-.+.|.|+.-+|+|.+|+.|...|.|++|.+.+ +..+..+.+|-..|+||
T Consensus 51 ~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelss-G~LL~v~~aHYQ~ITcL 129 (476)
T KOG0646|consen 51 EYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFLLAGTISGNLYLWELSS-GILLNVLSAHYQSITCL 129 (476)
T ss_pred hheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEEEeecccCcEEEEEecc-ccHHHHHHhhccceeEE
Confidence 46666654 34789999876555554445677899999999999999999999999999998 88888999999999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeE
Q 002591 715 DFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 715 ~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
.|+.|+..+| ||+.||.|.+|++..- +.+..++ +-++++.+..|.-+|+
T Consensus 130 ~fs~dgs~ii-TgskDg~V~vW~l~~l----------------------v~a~~~~--------~~~p~~~f~~HtlsIT 178 (476)
T KOG0646|consen 130 KFSDDGSHII-TGSKDGAVLVWLLTDL----------------------VSADNDH--------SVKPLHIFSDHTLSIT 178 (476)
T ss_pred EEeCCCcEEE-ecCCCccEEEEEEEee----------------------cccccCC--------CccceeeeccCcceeE
Confidence 9999987555 9999999999986421 1111121 3467778888999999
Q ss_pred EEEEcCCC--CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc----
Q 002591 795 SVCWDPSG--ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK---- 867 (903)
Q Consensus 795 sl~~spdg--~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~---- 867 (903)
.+...+.| .+|++++.| ++++||+..+ ..+..+.. ...+.+|+.+|.++.+++|+.+|.|.+.++....
T Consensus 179 Dl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g---~LLlti~f-p~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~ 254 (476)
T KOG0646|consen 179 DLQIGSGGTNARLYTASEDRTIKLWDLSLG---VLLLTITF-PSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSA 254 (476)
T ss_pred EEEecCCCccceEEEecCCceEEEEEeccc---eeeEEEec-CCcceeEEEcccccEEEecCCcceEEeeehhcCCcccc
Confidence 99988754 389999999 9999999887 44443332 7789999999999999999999999988875322
Q ss_pred -------------EEEEccCCC--CEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 868 -------------TMTLTAHEG--LIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 868 -------------~~~~~~h~~--~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
...+.+|.+ .|+|++++-||.+|++|+.||.|+|||
T Consensus 255 ~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWd 305 (476)
T KOG0646|consen 255 GVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWD 305 (476)
T ss_pred cccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEe
Confidence 125678888 999999999999999999999999997
No 140
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.86 E-value=1.9e-20 Score=199.38 Aligned_cols=241 Identities=22% Similarity=0.421 Sum_probs=191.3
Q ss_pred EEEEEcC-------CCCEEEEEeCCCcEEEEECCC---CceeEE------------------eccCCCCeEEEEECCCCC
Q 002591 627 ICCHFSS-------DGKLLATGGHDKKAVLWHTDT---LKSKTN------------------LEEHSSLITDVRFSPSMP 678 (903)
Q Consensus 627 ~~l~fsp-------dg~~Latgs~Dg~V~vWd~~t---~~~~~~------------------l~~h~~~V~~l~fspdg~ 678 (903)
.|++|.. .|+++|.|+.|..|.|||++- -.+..+ -.+|++.|.++.|+.+-+
T Consensus 177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~ 256 (463)
T KOG0270|consen 177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFR 256 (463)
T ss_pred hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccc
Confidence 5777743 357999999999999999752 111111 236999999999988754
Q ss_pred -EEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC---CeeeEEeecCceeE
Q 002591 679 -RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN---GSCTRVFKGGTAQM 754 (903)
Q Consensus 679 -~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t---~~~~~~~~~~~~~v 754 (903)
.||+||.|.+|++||+.+ +++..++..|...|.++.|+|....+|++|+.|++|.+.|.+. ......+.+.+..+
T Consensus 257 nVLaSgsaD~TV~lWD~~~-g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv 335 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDT-GKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV 335 (463)
T ss_pred eeEEecCCCceEEEEEcCC-CCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE
Confidence 789999999999999998 8899999999999999999999999999999999999999994 33445677889999
Q ss_pred EEecCCC-EEEEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEe
Q 002591 755 RFQPHLG-RYLAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHEL 830 (903)
Q Consensus 755 ~~sp~~~-~ll~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~ 830 (903)
.|.+... .++++..||+|+-+|+|.. +++.++..|..+|.+|+++..-. ++++++.+ .|++|++..... +.+...
T Consensus 336 ~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~-~~v~~~ 414 (463)
T KOG0270|consen 336 AWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSP-KSVKEH 414 (463)
T ss_pred EecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCC-cccccc
Confidence 9999874 5666777899999999986 99999999999999999998554 78888888 999999975422 222222
Q ss_pred ecCCCceEEEEEeCCCCE-EEEEECCCeEEEEECCCCcEE
Q 002591 831 SCNGNKFHSCVFHPTYPS-LLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 831 ~~~~~~i~si~~sp~g~~-l~t~s~dg~I~vwdl~~~~~~ 869 (903)
.-.-+...|+++.|+-.+ +++|+..+.++|||+.+...+
T Consensus 415 ~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 415 SFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred cccccceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 222334667778887655 455666678999999877544
No 141
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=7e-22 Score=220.29 Aligned_cols=199 Identities=23% Similarity=0.381 Sum_probs=182.9
Q ss_pred eeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 002591 614 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWD 693 (903)
..+..|.+|..+|.||.|+.+..+|++|+.+|+|+|||++..+.++++.+|...+..|.|+|-+.+++.|+.|+.+++||
T Consensus 61 ~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD 140 (825)
T KOG0267|consen 61 NAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWD 140 (825)
T ss_pred chhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehh
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee---cCceeEEEecCCCEEEEEEcCC
Q 002591 694 ADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK---GGTAQMRFQPHLGRYLAAAAEN 770 (903)
Q Consensus 694 l~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~---~~~~~v~~sp~~~~ll~~s~dg 770 (903)
++. ..|...+.+|...|.+++|+|+|. +++++++|.+|+|||...|+....|+ +.+..+.|+|..-.+..|+.|+
T Consensus 141 ~Rk-~Gc~~~~~s~~~vv~~l~lsP~Gr-~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~ 218 (825)
T KOG0267|consen 141 IRK-KGCSHTYKSHTRVVDVLRLSPDGR-WVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDR 218 (825)
T ss_pred hhc-cCceeeecCCcceeEEEeecCCCc-eeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCc
Confidence 997 568899999999999999999977 56699999999999999999998887 5667788999888888899999
Q ss_pred eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEE
Q 002591 771 VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVR 814 (903)
Q Consensus 771 ~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~ 814 (903)
+|++||+++.+.+.........|.+++|++++..+++|....+.
T Consensus 219 tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~sl~ 262 (825)
T KOG0267|consen 219 TVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQISLS 262 (825)
T ss_pred eeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchhhhh
Confidence 99999999999999888888999999999999999998877544
No 142
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=5.7e-21 Score=208.66 Aligned_cols=258 Identities=22% Similarity=0.339 Sum_probs=199.7
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC--------CCceeEEeccCCCCeEEEEECCCCCEEEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD--------TLKSKTNLEEHSSLITDVRFSPSMPRLATS 683 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~--------t~~~~~~l~~h~~~V~~l~fspdg~~Lasg 683 (903)
+|....+++.|.+.|++++|.+....|++++.||+|++|++. ..+.+.+|++|.++|.|+++.+++..+++|
T Consensus 283 ~w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysg 362 (577)
T KOG0642|consen 283 KWNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSG 362 (577)
T ss_pred ecceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEee
Confidence 456666999999999999999999999999999999999983 246788999999999999999999999999
Q ss_pred eCCCcEEEEeCCC---------CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---Cc
Q 002591 684 SFDKTVRVWDADN---------PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GT 751 (903)
Q Consensus 684 s~Dg~I~IWDl~~---------~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~ 751 (903)
+.||+|+.|++.. ......++.||++.|+.++++....++ ++|+.||+|++|+...... .+|.. +.
T Consensus 363 g~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~L-lscs~DgTvr~w~~~~~~~-~~f~~~~e~g 440 (577)
T KOG0642|consen 363 GIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRL-LSCSSDGTVRLWEPTEESP-CTFGEPKEHG 440 (577)
T ss_pred ccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccce-eeecCCceEEeeccCCcCc-cccCCccccC
Confidence 9999999995531 123456788999999999999986665 5999999999999877655 33322 22
Q ss_pred e--eEEEecCC-CEEEEEEcCCeEEEEECCCCeEEEEecCC-------CCCeEEEEEcCCCCEEEEEeCC-eEEEEECCC
Q 002591 752 A--QMRFQPHL-GRYLAAAAENVVSILDAETQACRLSLQGH-------TKPIDSVCWDPSGELLASVSED-SVRVWTVGS 820 (903)
Q Consensus 752 ~--~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~~~~~l~~h-------~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s 820 (903)
. .+.+.... ...++...-+.-.++|.+....+..+... ...+.-+.++|...+.+++.++ .|+++|..+
T Consensus 441 ~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~ 520 (577)
T KOG0642|consen 441 YPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKT 520 (577)
T ss_pred CcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccc
Confidence 2 23332222 22222222333444455554444443321 1346778999999999999999 999999988
Q ss_pred CCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccC
Q 002591 821 GSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAH 874 (903)
Q Consensus 821 ~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h 874 (903)
+ ..++....|...++++++.|+|.+|++++.|+.|++|.+....++ ....|
T Consensus 521 ~---~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~ 572 (577)
T KOG0642|consen 521 G---KILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAH 572 (577)
T ss_pred c---ccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeeccccc
Confidence 7 778888888999999999999999999999999999999877666 33344
No 143
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.85 E-value=1e-20 Score=221.66 Aligned_cols=242 Identities=19% Similarity=0.362 Sum_probs=201.0
Q ss_pred CCCeEEEEEcCCCCE----EEEEeCCCcEEEEECCC------CceeEEeccCCCCeEEEEECCCCC-EEEEEeCCCcEEE
Q 002591 623 TSKVICCHFSSDGKL----LATGGHDKKAVLWHTDT------LKSKTNLEEHSSLITDVRFSPSMP-RLATSSFDKTVRV 691 (903)
Q Consensus 623 ~~~V~~l~fspdg~~----Latgs~Dg~V~vWd~~t------~~~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I~I 691 (903)
..+.++++|.+.|.. ||.|..||.|.+||... ...+.++..|++.|..+.|++... +||+|+.||.|.|
T Consensus 64 ~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~i 143 (1049)
T KOG0307|consen 64 SNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILI 143 (1049)
T ss_pred cccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEE
Confidence 456889999987765 89999999999999764 244566778999999999999876 9999999999999
Q ss_pred EeCCCCCceeEE-eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec-----CceeEEEecCCC-EEE
Q 002591 692 WDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG-----GTAQMRFQPHLG-RYL 764 (903)
Q Consensus 692 WDl~~~~~~~~~-~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-----~~~~v~~sp~~~-~ll 764 (903)
||+.+....... -....+.|.+|+|+..-.++|++++.+|.+.|||++..+.+-.+.. +...+.|+|++. .++
T Consensus 144 WDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~ 223 (1049)
T KOG0307|consen 144 WDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLL 223 (1049)
T ss_pred eccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeee
Confidence 999874443332 1225678999999988888999999999999999998876655543 355789999984 566
Q ss_pred EEEcCC---eEEEEECCCC-eEEEEecCCCCCeEEEEEcCCC-CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 765 AAAAEN---VVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSG-ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 765 ~~s~dg---~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg-~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
+++.|. .|.+||+|.- ..+.++.+|...|.++.|++.+ .+|++++.| .|.+|+.+++ +.+.++....+.+.
T Consensus 224 ~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tg---Evl~~~p~~~nW~f 300 (1049)
T KOG0307|consen 224 VASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTG---EVLGELPAQGNWCF 300 (1049)
T ss_pred eecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCc---eEeeecCCCCccee
Confidence 665543 8999999875 6777788999999999999966 688999988 9999999987 77888888889999
Q ss_pred EEEEeCCCC-EEEEEECCCeEEEEECCCCc
Q 002591 839 SCVFHPTYP-SLLVIGCYQSLELWNMSENK 867 (903)
Q Consensus 839 si~~sp~g~-~l~t~s~dg~I~vwdl~~~~ 867 (903)
.+.|+|... .|++++.||.|.||.+.+..
T Consensus 301 dv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 301 DVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeeecCCCcchhhhheeccceeeeeeecCC
Confidence 999999887 67788999999999987765
No 144
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.84 E-value=1.4e-19 Score=199.27 Aligned_cols=269 Identities=17% Similarity=0.275 Sum_probs=212.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEe
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTF 704 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~ 704 (903)
.|..++|-|||..|+.+. +..+.|||...|..+.++++|.+.|.|++|+.||+++++|+.|+.|.||.-.-.+ +..
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG--~Lk- 89 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG--ILK- 89 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc--eee-
Confidence 899999999999887775 4579999999999999999999999999999999999999999999999876433 222
Q ss_pred ccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE-EeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEE
Q 002591 705 MGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR-VFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACR 783 (903)
Q Consensus 705 ~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~-~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~ 783 (903)
..|.+.|.|+.|+|-.. .+++|+- ...-+|........+ .....+.+++|..+|.+++.|-.+|+|.|-+....+.+
T Consensus 90 YSH~D~IQCMsFNP~~h-~LasCsL-sdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~ 167 (1081)
T KOG1538|consen 90 YSHNDAIQCMSFNPITH-QLASCSL-SDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKV 167 (1081)
T ss_pred eccCCeeeEeecCchHH-Hhhhcch-hhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcce
Confidence 35999999999999865 4557774 457789877554332 22345677889999999999999999999854433322
Q ss_pred EEe--cCCCCCeEEEEEcCCC-----CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC
Q 002591 784 LSL--QGHTKPIDSVCWDPSG-----ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY 855 (903)
Q Consensus 784 ~~l--~~h~~~V~sl~~spdg-----~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d 855 (903)
..- .+..++|.+|+|+|.. ..+++...+ ++.+|.+.. ..+..-..-+....++.+.++|.++++|++|
T Consensus 168 ~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG----~~Igk~r~L~FdP~CisYf~NGEy~LiGGsd 243 (1081)
T KOG1538|consen 168 KIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSG----KQIGKDRALNFDPCCISYFTNGEYILLGGSD 243 (1081)
T ss_pred EEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecc----eeecccccCCCCchhheeccCCcEEEEccCC
Confidence 222 2467899999999953 366777766 777777653 2332222234456788999999999999999
Q ss_pred CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 856 QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 856 g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+.+++|.-+.-.+-++...+.+|+.++..|++.+++.|+.||+|-.|+
T Consensus 244 k~L~~fTR~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyN 291 (1081)
T KOG1538|consen 244 KQLSLFTRDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYN 291 (1081)
T ss_pred CceEEEeecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhh
Confidence 999999865555547777889999999999999999999999998764
No 145
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.84 E-value=1.5e-19 Score=185.78 Aligned_cols=288 Identities=19% Similarity=0.350 Sum_probs=220.2
Q ss_pred ceeeeeEe-ecCCCCeEEEEEcC-----CCCEEEEEeCCCcEEEEECCC-C--ceeEEec--cCCCCeEEEEECCC----
Q 002591 612 SFKEANSV-RASTSKVICCHFSS-----DGKLLATGGHDKKAVLWHTDT-L--KSKTNLE--EHSSLITDVRFSPS---- 676 (903)
Q Consensus 612 ~~~~~~~l-~~H~~~V~~l~fsp-----dg~~Latgs~Dg~V~vWd~~t-~--~~~~~l~--~h~~~V~~l~fspd---- 676 (903)
.++....+ +.|..+|..++|.. .-..+||++. ..|.||.... + ..+..+. .|......++|+-+
T Consensus 26 ~yk~t~~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~ 104 (385)
T KOG1034|consen 26 SYKYTNHLKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTG 104 (385)
T ss_pred ceEeeeehhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCC
Confidence 44554444 47889999999984 2236677664 4788888663 2 2233332 47777888888654
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec------C
Q 002591 677 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG------G 750 (903)
Q Consensus 677 g~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~------~ 750 (903)
..+||+|+.-|.|+|.|+.+ ..+...+.+|...|..|.|+|+...++++|+.|..||+|++.+..|+.+|.+ +
T Consensus 105 ~p~la~~G~~GvIrVid~~~-~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrde 183 (385)
T KOG1034|consen 105 NPFLAAGGYLGVIRVIDVVS-GQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDE 183 (385)
T ss_pred CeeEEeecceeEEEEEecch-hhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCc
Confidence 34789999999999999998 7888999999999999999999999999999999999999999999998853 5
Q ss_pred ceeEEEecCCCEEEEEEcCCeEEEEECCCCeE------E---------------------E-EecCCCCCeEEEEEcCCC
Q 002591 751 TAQMRFQPHLGRYLAAAAENVVSILDAETQAC------R---------------------L-SLQGHTKPIDSVCWDPSG 802 (903)
Q Consensus 751 ~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~------~---------------------~-~l~~h~~~V~sl~~spdg 802 (903)
+.++.|+.++.++++++.|..|.+|++...+. . + +...|...|.|+.|- |
T Consensus 184 VLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--g 261 (385)
T KOG1034|consen 184 VLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--G 261 (385)
T ss_pred EEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--h
Confidence 78899999999999999999999999883211 1 0 112366677777777 6
Q ss_pred CEEEEEeCC-eEEEEECCCC-C----------CcceEEEeecCCCce--EEEEEeCCCCEEEEEECCCeEEEEECCCCcE
Q 002591 803 ELLASVSED-SVRVWTVGSG-S----------EGECVHELSCNGNKF--HSCVFHPTYPSLLVIGCYQSLELWNMSENKT 868 (903)
Q Consensus 803 ~~lasgs~d-~I~iwdl~s~-~----------~~~~i~~~~~~~~~i--~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~ 868 (903)
+++++-+.+ .|..|....- + ....+.++......| ...+|.+-.+.|+.|...|.|++||++..+.
T Consensus 262 d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep 341 (385)
T KOG1034|consen 262 DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEP 341 (385)
T ss_pred hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCC
Confidence 888887766 9999987221 1 112233333333333 4456777889999999999999999988776
Q ss_pred E-----EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 869 M-----TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 869 ~-----~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
. ........|...+|+.|+.+|+..++|++|.-||
T Consensus 342 ~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwd 381 (385)
T KOG1034|consen 342 PKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWD 381 (385)
T ss_pred ccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEE
Confidence 3 2233456899999999999999999999998886
No 146
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.84 E-value=6.9e-21 Score=223.16 Aligned_cols=274 Identities=19% Similarity=0.283 Sum_probs=215.7
Q ss_pred eEEEEEcCCCC-EEEEEe----------CCCcEEEEECC--CCc----eeEEeccCCCCeEEEEECCCCCE----EEEEe
Q 002591 626 VICCHFSSDGK-LLATGG----------HDKKAVLWHTD--TLK----SKTNLEEHSSLITDVRFSPSMPR----LATSS 684 (903)
Q Consensus 626 V~~l~fspdg~-~Latgs----------~Dg~V~vWd~~--t~~----~~~~l~~h~~~V~~l~fspdg~~----Lasgs 684 (903)
--.++|+|++. +||+|. .+.++-||.++ +.+ .+..+ .-....++++|.+.+.. ||.|.
T Consensus 9 ta~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~-~s~~rF~kL~W~~~g~~~~GlIaGG~ 87 (1049)
T KOG0307|consen 9 TATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSL-QSSNRFNKLAWGSYGSHSHGLIAGGL 87 (1049)
T ss_pred cceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccc-cccccceeeeecccCCCccceeeccc
Confidence 34578899886 666543 34556666654 222 22222 23456889999988775 88889
Q ss_pred CCCcEEEEeCCCC-----CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe-----ecCceeE
Q 002591 685 FDKTVRVWDADNP-----GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF-----KGGTAQM 754 (903)
Q Consensus 685 ~Dg~I~IWDl~~~-----~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~-----~~~~~~v 754 (903)
.||.|.+||...- ...+.++..|++.|..++|++..++++++|+.||.|.|||+..-+.-..+ ...+.++
T Consensus 88 edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~l 167 (1049)
T KOG0307|consen 88 EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCL 167 (1049)
T ss_pred cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEe
Confidence 9999999998751 23466778899999999999999999999999999999999875533332 3467888
Q ss_pred EEecCCCEEEEE-EcCCeEEEEECCCCeEEEEecCCCC--CeEEEEEcCCCC-EEEEEeCC----eEEEEECCCCCCcce
Q 002591 755 RFQPHLGRYLAA-AAENVVSILDAETQACRLSLQGHTK--PIDSVCWDPSGE-LLASVSED----SVRVWTVGSGSEGEC 826 (903)
Q Consensus 755 ~~sp~~~~ll~~-s~dg~I~i~D~~t~~~~~~l~~h~~--~V~sl~~spdg~-~lasgs~d----~I~iwdl~s~~~~~~ 826 (903)
+|+....++++. +.+|++.|||++..+.+..+..+.. .+..|.|+|+.. .|+++++| .|.+||+|... ..
T Consensus 168 sWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as--sP 245 (1049)
T KOG0307|consen 168 SWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS--SP 245 (1049)
T ss_pred ccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC--Cc
Confidence 888877665555 5577999999999988888876655 477899999876 55555544 79999998653 45
Q ss_pred EEEeecCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCC-EEEEEecCCcEEEc
Q 002591 827 VHELSCNGNKFHSCVFHPTY-PSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETG-YVASASHDKFVKLW 902 (903)
Q Consensus 827 i~~~~~~~~~i~si~~sp~g-~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~-~LaSgs~DG~I~IW 902 (903)
++++.+|...|.++.|++.+ .++++++.|+.|.+|+.++++.+ .+....+++..+.|+|... .|+.++-||.|.||
T Consensus 246 ~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~ 324 (1049)
T KOG0307|consen 246 LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIY 324 (1049)
T ss_pred hhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeee
Confidence 66778999999999999976 88999999999999999999999 7778889999999999776 78888999999987
No 147
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=1.3e-19 Score=188.97 Aligned_cols=314 Identities=18% Similarity=0.223 Sum_probs=225.2
Q ss_pred ceEEeeecCCCCCcCCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC------Ccee
Q 002591 585 NVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT------LKSK 658 (903)
Q Consensus 585 ~v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t------~~~~ 658 (903)
+|+.|++...........+.+.......--+.+.+++|.+.|++|.|+.++.+||+|+.|..++||+++. .+++
T Consensus 18 ~i~~FL~QR~i~~~~~~~k~F~~~~~~R~~~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI 97 (609)
T KOG4227|consen 18 KIESFLCQREIGSVKSVVKTFRPDFQHRPFCQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPI 97 (609)
T ss_pred eeeeeeeecccCCChhhhhhhchhhhhcchhhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCc
Confidence 4566666544333322222222211112224456789999999999999999999999999999999863 3444
Q ss_pred EEec-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEecc--CCCceEEEEecCCCCeEEEEEeCCCcEEE
Q 002591 659 TNLE-EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMG--HSASVMSLDFHPNKDDLICSCDGDGEIRY 735 (903)
Q Consensus 659 ~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~--h~~~V~sl~fsp~~~~ll~sgs~Dg~I~i 735 (903)
.... .|...|.|++|....++|++|..+++|.+.|+++ ...+..+.. ..+.|+.+..+|.. ++|++.+.++.|.+
T Consensus 98 ~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt-~qsi~V~~~~~~~~~VY~m~~~P~D-N~~~~~t~~~~V~~ 175 (609)
T KOG4227|consen 98 GVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIET-KQSIYVANENNNRGDVYHMDQHPTD-NTLIVVTRAKLVSF 175 (609)
T ss_pred eeccCccccceEEEEEccCCeeEecCCCcceeEeeeccc-ceeeeeecccCcccceeecccCCCC-ceEEEEecCceEEE
Confidence 4443 3568999999999999999999999999999998 555555542 23589999999994 46678899999999
Q ss_pred EEcCCCe------eeEEeecCceeEEEecCCCEE-EEEEcCCeEEEEECCCCe-EEEEec------CCCCCeEEEEEcCC
Q 002591 736 WSINNGS------CTRVFKGGTAQMRFQPHLGRY-LAAAAENVVSILDAETQA-CRLSLQ------GHTKPIDSVCWDPS 801 (903)
Q Consensus 736 wDi~t~~------~~~~~~~~~~~v~~sp~~~~l-l~~s~dg~I~i~D~~t~~-~~~~l~------~h~~~V~sl~~spd 801 (903)
||++... |...+......+.|+|....| ++....+.+.+||.+... .+.... .......++.|+|+
T Consensus 176 ~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~ 255 (609)
T KOG4227|consen 176 IDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPS 255 (609)
T ss_pred EeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCC
Confidence 9998754 222333456678899988655 455667899999998753 222211 11223467889999
Q ss_pred CCEEEEEeCC-eEEEEECCCCCCcceEEEeec------CCCceEEEEEeCCCCEEEEEECCCeEEEEECCC---------
Q 002591 802 GELLASVSED-SVRVWTVGSGSEGECVHELSC------NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSE--------- 865 (903)
Q Consensus 802 g~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~------~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~--------- 865 (903)
|+.|.+.-.. .-.+||+-+.. ..+..+.. ....+.+|+|..+.. +++|+.+-.|++|.+..
T Consensus 256 G~Q~msiRR~~~P~~~D~~S~R--~~V~k~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~ 332 (609)
T KOG4227|consen 256 GNQFMSIRRGKCPLYFDFISQR--CFVLKSDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQ 332 (609)
T ss_pred CCeehhhhccCCCEEeeeeccc--ceeEeccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccc
Confidence 9988777666 66778886531 12222221 123466778877665 88888888999998742
Q ss_pred ---------------CcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 866 ---------------NKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 866 ---------------~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+....+.+|...++-+.|++...+|++.+..+.++||.
T Consensus 333 IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS 385 (609)
T KOG4227|consen 333 IGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWS 385 (609)
T ss_pred cCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhhheeccc
Confidence 12336789999999999999999999999999999993
No 148
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.84 E-value=1.8e-20 Score=210.72 Aligned_cols=236 Identities=19% Similarity=0.319 Sum_probs=192.7
Q ss_pred eEEEEEcC-CCCEEEEEeCCCcEEEEECCC---CceeEEeccCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCce
Q 002591 626 VICCHFSS-DGKLLATGGHDKKAVLWHTDT---LKSKTNLEEHSSLITDVRFSPSM-PRLATSSFDKTVRVWDADNPGYS 700 (903)
Q Consensus 626 V~~l~fsp-dg~~Latgs~Dg~V~vWd~~t---~~~~~~l~~h~~~V~~l~fspdg-~~Lasgs~Dg~I~IWDl~~~~~~ 700 (903)
+..|.|.. +.++|||++..|.|.+||+.. .+.+..|..|+..|++++|++.. .+|++|+.||+|++||++. .+.
T Consensus 90 ~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~-~~S 168 (839)
T KOG0269|consen 90 AADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS-KKS 168 (839)
T ss_pred hhhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec-ccc
Confidence 45567764 557999999999999999986 56677899999999999998864 4789999999999999998 666
Q ss_pred eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeE---EeecCceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 701 LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTR---VFKGGTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 701 ~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~---~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
..++.+....|.++.|+|...+.|+++.+.|.+.+||++... +.. .+.+.+.++.|+|+..+|++|+.|+.|+|||
T Consensus 169 ~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd 248 (839)
T KOG0269|consen 169 KSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWD 248 (839)
T ss_pred cccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEe
Confidence 778888999999999999988899999999999999999754 333 3457889999999999999999999999999
Q ss_pred CCCCeE--EEEecCCCCCeEEEEEcCCCC-EEEEEeC--C-eEEEEECCCCCCcceEEEeecCCCceEEEEEeC-CCCEE
Q 002591 777 AETQAC--RLSLQGHTKPIDSVCWDPSGE-LLASVSE--D-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP-TYPSL 849 (903)
Q Consensus 777 ~~t~~~--~~~l~~h~~~V~sl~~spdg~-~lasgs~--d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp-~g~~l 849 (903)
..+.+. +.++. ...+|.+|.|-|+.. .|++++. | .|+|||++.. .-....+..|...++.++|.. +-..+
T Consensus 249 ~t~~~~~~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP--YIP~~t~~eH~~~vt~i~W~~~d~~~l 325 (839)
T KOG0269|consen 249 MTDSRAKPKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP--YIPYATFLEHTDSVTGIAWDSGDRINL 325 (839)
T ss_pred ccCCCccceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEeeccc--cccceeeeccCccccceeccCCCceee
Confidence 987643 33333 457899999999876 6776654 3 8999999864 456677888999999999976 34557
Q ss_pred EEEECCCeEEEEECCC
Q 002591 850 LVIGCYQSLELWNMSE 865 (903)
Q Consensus 850 ~t~s~dg~I~vwdl~~ 865 (903)
.+++.|+.|..-.++.
T Consensus 326 ~s~sKD~tv~qh~~kn 341 (839)
T KOG0269|consen 326 WSCSKDGTVLQHLFKN 341 (839)
T ss_pred EeecCccHHHHhhhhc
Confidence 7777888766554443
No 149
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.84 E-value=2.1e-19 Score=181.85 Aligned_cols=207 Identities=20% Similarity=0.328 Sum_probs=167.1
Q ss_pred ccCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC-----------cee---EEeccCCCceEEEEecCCCCeEEEE
Q 002591 662 EEHSSLITDVRFSP-SMPRLATSSFDKTVRVWDADNPG-----------YSL---RTFMGHSASVMSLDFHPNKDDLICS 726 (903)
Q Consensus 662 ~~h~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWDl~~~~-----------~~~---~~~~~h~~~V~sl~fsp~~~~ll~s 726 (903)
+.|.+.|+++...+ .|+++++|+.||.|.|||+.+.. +++ ..-.+|.-.|.++.|.|-..-++.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 45778899998876 58899999999999999997632 111 1123688899999999988889989
Q ss_pred EeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCC--C-EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC
Q 002591 727 CDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHL--G-RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPS 801 (903)
Q Consensus 727 gs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~--~-~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd 801 (903)
++.|.++++||.++......|+ +.+..-+++|-. . .++++..+-.|++.|+.+|.+.+++.+|...|.++.|+|.
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~ 199 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS 199 (397)
T ss_pred ccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence 9999999999999988776664 556666677654 2 4445555679999999999999999999999999999998
Q ss_pred CC-EEEEEeCC-eEEEEECCCCC------------CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc
Q 002591 802 GE-LLASVSED-SVRVWTVGSGS------------EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK 867 (903)
Q Consensus 802 g~-~lasgs~d-~I~iwdl~s~~------------~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~ 867 (903)
.+ .|++|+.| .|++||++... ....++.-..|.+.|..++|..++.++++++.|..+++|+...|+
T Consensus 200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 77 67888888 99999998641 112222334567789999999999999999999999999998775
Q ss_pred E
Q 002591 868 T 868 (903)
Q Consensus 868 ~ 868 (903)
-
T Consensus 280 n 280 (397)
T KOG4283|consen 280 N 280 (397)
T ss_pred c
Confidence 3
No 150
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.84 E-value=1.2e-19 Score=200.28 Aligned_cols=247 Identities=15% Similarity=0.257 Sum_probs=186.9
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE--eccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEe
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN--LEEHSSLITDVRFSPSMP-RLATSSFDKTVRVWD 693 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~--l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I~IWD 693 (903)
..+..|...|.++.|.|....|++++.|.++++||+++.+++.. +.+|...|.+++|.+.+. .|++|+.||.|.|||
T Consensus 94 k~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD 173 (720)
T KOG0321|consen 94 KKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWD 173 (720)
T ss_pred cccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEE
Confidence 44568999999999999667999999999999999998888777 899999999999999765 789999999999999
Q ss_pred CCCCCc--------------------------eeEEeccCCCceEE---EEecCCCCeEEEEEeC-CCcEEEEEcCCCee
Q 002591 694 ADNPGY--------------------------SLRTFMGHSASVMS---LDFHPNKDDLICSCDG-DGEIRYWSINNGSC 743 (903)
Q Consensus 694 l~~~~~--------------------------~~~~~~~h~~~V~s---l~fsp~~~~ll~sgs~-Dg~I~iwDi~t~~~ 743 (903)
++-.+. -++....+...|.+ +.+..|.. .||+++. |+.|+|||++...+
T Consensus 174 ~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~-tlaSaga~D~~iKVWDLRk~~~ 252 (720)
T KOG0321|consen 174 CRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDES-TLASAGAADSTIKVWDLRKNYT 252 (720)
T ss_pred EeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccc-eeeeccCCCcceEEEeeccccc
Confidence 974220 01222234444444 44555545 4557766 99999999997654
Q ss_pred eEEe--------------ecCceeEEEecCCCEEEEEEcCCeEEEEECCCC--eEEEEecCCCCC--eEEEEEcCCCCEE
Q 002591 744 TRVF--------------KGGTAQMRFQPHLGRYLAAAAENVVSILDAETQ--ACRLSLQGHTKP--IDSVCWDPSGELL 805 (903)
Q Consensus 744 ~~~~--------------~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~--~~~~~l~~h~~~--V~sl~~spdg~~l 805 (903)
.... ..+..+++....|.++++.+.|+.|++|++.+. .++..+.++... ...-+.+|++.+|
T Consensus 253 ~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l 332 (720)
T KOG0321|consen 253 AYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSL 332 (720)
T ss_pred ccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceE
Confidence 3221 123456777778899999999999999999875 344444443322 2223578999999
Q ss_pred EEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCCC
Q 002591 806 ASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY-PSLLVIGCYQSLELWNMSEN 866 (903)
Q Consensus 806 asgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g-~~l~t~s~dg~I~vwdl~~~ 866 (903)
++|+.| ..++|.+.+.. .....+.+|...|++++|.|.. .-+++++.|-.++||++..+
T Consensus 333 ~SgSsd~~ayiw~vs~~e--~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 333 LSGSSDEQAYIWVVSSPE--APPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred eccCCCcceeeeeecCcc--CChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 999999 99999998764 3445567788899999998843 34778899999999999654
No 151
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=3.8e-19 Score=181.72 Aligned_cols=274 Identities=19% Similarity=0.262 Sum_probs=193.5
Q ss_pred cceEEEEeCCCceec---cCCCeeeeCCcchhhhhhccccccCCC-----------CCceEEeeecCCCCCcCCCCcccc
Q 002591 541 KPLMMFGTDGAGTLT---SPSNQLWDDKDLELRADMDRLVEDGSL-----------DDNVESFLSHDDTDPRDAGGRGMD 606 (903)
Q Consensus 541 ~~~i~~s~dg~~~~~---~~~~~lWd~~~~~~~~~~~~~~~~gs~-----------d~~v~~~~~~d~~~~~~~~~~~~d 606 (903)
...++|+.||.++++ +.+++||++++-+...... +-.+-+. ...+..|+..++.....+..+--|
T Consensus 89 vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~-~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~K~~d 167 (420)
T KOG2096|consen 89 VTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRC-IRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLVKKTD 167 (420)
T ss_pred eeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhH-hhccccCCCceEEEECCCcceEEEEEccCCEEEEEEeeeccc
Confidence 458999999999877 7788999999866544311 1111111 223333333222111111111111
Q ss_pred cccCcceeeee---EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEE
Q 002591 607 VSQGFSFKEAN---SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS 683 (903)
Q Consensus 607 ~~~~~~~~~~~---~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasg 683 (903)
-.-.+++...- .-+.|.-.|..+-....+++|++++.|.+|.||+++ |..+..+......-+..+.+|+|++|+++
T Consensus 168 G~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~ 246 (420)
T KOG2096|consen 168 GSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVS 246 (420)
T ss_pred CCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEe
Confidence 00011111111 223466778888888889999999999999999998 89999998877788889999999999999
Q ss_pred eCCCcEEEEeCCC--C-----CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC-------eeeEEee-
Q 002591 684 SFDKTVRVWDADN--P-----GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG-------SCTRVFK- 748 (903)
Q Consensus 684 s~Dg~I~IWDl~~--~-----~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~-------~~~~~~~- 748 (903)
+..-.|++|.+-- . -..+..++||...|..++|+++...++ +.+.||+++|||+.-. +.++++.
T Consensus 247 gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~v-tvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~ 325 (420)
T KOG2096|consen 247 GFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAV-TVSKDGKWRIWDTDVRYEAGQDPKILKEGSA 325 (420)
T ss_pred cCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeE-EEecCCcEEEeeccceEecCCCchHhhcCCc
Confidence 9999999998731 1 123567889999999999999987655 9999999999998632 2222221
Q ss_pred ------cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEec-CCCCCeEEEEEcCCCCEEEEEeCCeEEEEEC
Q 002591 749 ------GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQ-GHTKPIDSVCWDPSGELLASVSEDSVRVWTV 818 (903)
Q Consensus 749 ------~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~-~h~~~V~sl~~spdg~~lasgs~d~I~iwdl 818 (903)
+....+..+|.+..| +.+....+.+|..++++...+++ .|...|.+|+|+++|++++++++..++++.-
T Consensus 326 pl~aag~~p~RL~lsP~g~~l-A~s~gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcGdr~vrv~~n 401 (420)
T KOG2096|consen 326 PLHAAGSEPVRLELSPSGDSL-AVSFGSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCGDRYVRVIRN 401 (420)
T ss_pred chhhcCCCceEEEeCCCCcEE-EeecCCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeecceeeeeecC
Confidence 123357788886655 55666789999999998777665 4999999999999999999999988888763
No 152
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.83 E-value=6.7e-19 Score=180.47 Aligned_cols=266 Identities=18% Similarity=0.273 Sum_probs=205.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCC------------ceeEEec-cCCCCeEEEEEC-------CCCCEEEEEe
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTL------------KSKTNLE-EHSSLITDVRFS-------PSMPRLATSS 684 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~------------~~~~~l~-~h~~~V~~l~fs-------pdg~~Lasgs 684 (903)
-...+.|+|||..|++-+.|..+.+|++... +...+++ .....|.+.+|- |+..++++.+
T Consensus 51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss 130 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS 130 (406)
T ss_pred hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence 4567899999999999999999999987521 1111122 234568888885 5677899999
Q ss_pred CCCcEEEEeCCCCCceeEEecc--CCC---ceEEEEecCCCCeEEEEEeCCCcEEEEEc-CCCeeeEEe----------e
Q 002591 685 FDKTVRVWDADNPGYSLRTFMG--HSA---SVMSLDFHPNKDDLICSCDGDGEIRYWSI-NNGSCTRVF----------K 748 (903)
Q Consensus 685 ~Dg~I~IWDl~~~~~~~~~~~~--h~~---~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi-~t~~~~~~~----------~ 748 (903)
.|.-|++||.-+ ++....+.+ |-+ ...+++|+|||..++ ++....|++||+ +.|.....+ .
T Consensus 131 r~~PIh~wdaft-G~lraSy~~ydh~de~taAhsL~Fs~DGeqlf--aGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 131 RDQPIHLWDAFT-GKLRASYRAYDHQDEYTAAHSLQFSPDGEQLF--AGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred ccCceeeeeccc-cccccchhhhhhHHhhhhheeEEecCCCCeEe--ecccceEEEeeccCCCCCCcchhhhhccccccc
Confidence 999999999988 555554443 333 356799999998776 566899999999 555422221 2
Q ss_pred cCceeEEEecCCC-EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcc
Q 002591 749 GGTAQMRFQPHLG-RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGE 825 (903)
Q Consensus 749 ~~~~~v~~sp~~~-~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~ 825 (903)
+-+.+++|+|... .+++++....+-||.-....++..+.+|.+.|+.++|+++|+.|++|+.. .|.+||++... .
T Consensus 208 giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~--~ 285 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSR--D 285 (406)
T ss_pred ceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhcc--c
Confidence 3456788999886 67777778899999999999999999999999999999999999998865 99999998653 3
Q ss_pred eEEEeecCCC---ceEEEEEeCCCCEEEEEECCCeEEEEECCC-CcEE-EEccCCCCEEEEEEecCCCEEEEEec
Q 002591 826 CVHELSCNGN---KFHSCVFHPTYPSLLVIGCYQSLELWNMSE-NKTM-TLTAHEGLIAALAVSTETGYVASASH 895 (903)
Q Consensus 826 ~i~~~~~~~~---~i~si~~sp~g~~l~t~s~dg~I~vwdl~~-~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~ 895 (903)
.+..+..|.. .-.-+...|++.+|++|+.||.|++||+.+ +..+ .+..|...|+.++++|--.++|+++.
T Consensus 286 pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssG 360 (406)
T KOG2919|consen 286 PVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSG 360 (406)
T ss_pred hhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccC
Confidence 3334433332 333445678999999999999999999988 5534 77789999999999999888888764
No 153
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.83 E-value=2.6e-19 Score=191.10 Aligned_cols=254 Identities=18% Similarity=0.243 Sum_probs=200.7
Q ss_pred EECCCCceeEEeccCCCCeEEEEECCCCC--EEEEEeCCCcEEEEeCC---CCCceeEEeccCCCceEEEEecCCCCeEE
Q 002591 650 WHTDTLKSKTNLEEHSSLITDVRFSPSMP--RLATSSFDKTVRVWDAD---NPGYSLRTFMGHSASVMSLDFHPNKDDLI 724 (903)
Q Consensus 650 Wd~~t~~~~~~l~~h~~~V~~l~fspdg~--~Lasgs~Dg~I~IWDl~---~~~~~~~~~~~h~~~V~sl~fsp~~~~ll 724 (903)
+|+.+-.....++.+...|++++|+|... .+|+|..-|.|-+||+. .....+..+..|..+|.+|.|+|.+...+
T Consensus 171 l~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i 250 (498)
T KOG4328|consen 171 LDLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQI 250 (498)
T ss_pred cccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhe
Confidence 44445556667778899999999999765 78888889999999995 22345678889999999999999988888
Q ss_pred EEEeCCCcEEEEEcCCCeeeEEeec-----CceeEEEecCCCEEEEEEcCCeEEEEECCCCeE-EEEecCCCCCeEEEEE
Q 002591 725 CSCDGDGEIRYWSINNGSCTRVFKG-----GTAQMRFQPHLGRYLAAAAENVVSILDAETQAC-RLSLQGHTKPIDSVCW 798 (903)
Q Consensus 725 ~sgs~Dg~I~iwDi~t~~~~~~~~~-----~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~-~~~l~~h~~~V~sl~~ 798 (903)
++.+.||+|++-|++.......+.. ....+.|+.+...++++..-|...+||.++... ...+.-|...|++|++
T Consensus 251 ~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~ 330 (498)
T KOG4328|consen 251 YSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVAL 330 (498)
T ss_pred eeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeec
Confidence 8999999999999998754333322 344566777778888888888999999998755 6667779999999999
Q ss_pred cCCCC-EEEEEeCC-eEEEEECCCCCCcc-eEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC----CCcEEEE
Q 002591 799 DPSGE-LLASVSED-SVRVWTVGSGSEGE-CVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS----ENKTMTL 871 (903)
Q Consensus 799 spdg~-~lasgs~d-~I~iwdl~s~~~~~-~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~----~~~~~~~ 871 (903)
+|-.. +|++++.| +++|||++...... .+.....|...|.++.|+|.+..|++.+.|..|+|||.. ..+....
T Consensus 331 NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~ 410 (498)
T KOG4328|consen 331 NPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGT 410 (498)
T ss_pred CCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccce
Confidence 99766 88999999 99999998764433 244555678899999999999889999999999999984 2233333
Q ss_pred ccCCC----C--EEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 872 TAHEG----L--IAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 872 ~~h~~----~--V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
..|.. . .....|.|+..+|++|-.-..|-|||
T Consensus 411 I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~ 448 (498)
T KOG4328|consen 411 IPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFD 448 (498)
T ss_pred eeccCcccccccchhheeCCCccEEEEeccCcceeEEc
Confidence 33322 2 34458999999999999888888875
No 154
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.83 E-value=8.6e-19 Score=187.26 Aligned_cols=248 Identities=16% Similarity=0.221 Sum_probs=202.0
Q ss_pred eeeeEeecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeE--EeccCC-CCeEEEEECCCCCEEEEEeCCCcE
Q 002591 614 KEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKT--NLEEHS-SLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t~~~~~--~l~~h~-~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
..+..+.-...+|.+++|.|+|. .+++++.....+.||+.+.+... ...++. ..+.....++++.+|+..+..|.|
T Consensus 248 ~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I 327 (514)
T KOG2055|consen 248 PKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHI 327 (514)
T ss_pred hhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceE
Confidence 34555666678999999999999 99999999999999998765433 333443 457788889999999999999999
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----CceeEEEecCCCEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----GTAQMRFQPHLGRYLA 765 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----~~~~v~~sp~~~~ll~ 765 (903)
.|....+ +..+.+++ -.+.|..++|+.++..++ +++.+|.|.+||++...|++.|.. +.+.+|.+.++.++++
T Consensus 328 ~lLhakT-~eli~s~K-ieG~v~~~~fsSdsk~l~-~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~ 404 (514)
T KOG2055|consen 328 HLLHAKT-KELITSFK-IEGVVSDFTFSSDSKELL-ASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLAT 404 (514)
T ss_pred Eeehhhh-hhhhheee-eccEEeeEEEecCCcEEE-EEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEe
Confidence 9999887 66666666 567899999999987766 555689999999999999998863 4567888999999999
Q ss_pred EEcCCeEEEEECCC------CeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC---eEEEEECCCCCCcceEEEeecCCCc
Q 002591 766 AAAENVVSILDAET------QACRLSLQGHTKPIDSVCWDPSGELLASVSED---SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 766 ~s~dg~I~i~D~~t------~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d---~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
|+..|.|.|||..+ .+++..+..-...|+++.|++|..+||.++.. .+++..+.+.......-.....-+.
T Consensus 405 GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~ 484 (514)
T KOG2055|consen 405 GSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGH 484 (514)
T ss_pred ccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccc
Confidence 99999999999654 46777777778899999999999999988865 7999988765322222222334567
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 837 FHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 837 i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
++|++|+|.+.++++|..+|.|.+|.+.
T Consensus 485 vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 485 VTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred eEEEEecCCCceEEeecCCCceeeEeec
Confidence 9999999999999999999999999874
No 155
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.82 E-value=5.3e-19 Score=189.52 Aligned_cols=218 Identities=18% Similarity=0.276 Sum_probs=182.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEe
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTF 704 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~ 704 (903)
.-.|++......|+++|+..++|+|||+....+.+.+++|...|+++.|+-...|||+++..|.|.|..+.+ +.....|
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t-~~~tt~f 159 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKT-KQKTTTF 159 (673)
T ss_pred hHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEeccc-Cccccce
Confidence 445665555568999999999999999998788888999999999999999999999999999999999988 4444555
Q ss_pred ccC-CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE----eecCceeEEEecCCCE-EEEEEcCCeEEEEECC
Q 002591 705 MGH-SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV----FKGGTAQMRFQPHLGR-YLAAAAENVVSILDAE 778 (903)
Q Consensus 705 ~~h-~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~----~~~~~~~v~~sp~~~~-ll~~s~dg~I~i~D~~ 778 (903)
... ...|.-+.|++..+.+|.+++++|.|.+||+.....+.. +..+...+||+|.... |++.+.|..|.+||++
T Consensus 160 ~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~ 239 (673)
T KOG4378|consen 160 TIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR 239 (673)
T ss_pred ecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence 543 455668999999999999999999999999987765543 3456788999998855 5566789999999999
Q ss_pred CCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC
Q 002591 779 TQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 779 t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g 846 (903)
..+....+. ...+...++|.++|.+|++|... .|..||++..+ ..+..+..|...|++++|-+.-
T Consensus 240 s~~s~~~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k--~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 240 SQASTDRLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK--APVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred cccccceee-ecCCcceeeecCCceEEEeecCCceEEEEecccCC--CCceEeeecccceeEEEeeecc
Confidence 877666554 56789999999999999999888 99999999754 5677778889999999998764
No 156
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.82 E-value=1.5e-18 Score=193.16 Aligned_cols=291 Identities=19% Similarity=0.268 Sum_probs=223.0
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCC---EEEEEeCCCcEEEEECCCCc---------------------eeEE-------
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGK---LLATGGHDKKAVLWHTDTLK---------------------SKTN------- 660 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~---~Latgs~Dg~V~vWd~~t~~---------------------~~~~------- 660 (903)
.|+.+..++||.+-|.+|+|..-+. +||+++.|..||||.+.-+. ....
T Consensus 180 ~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ 259 (764)
T KOG1063|consen 180 SFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISF 259 (764)
T ss_pred ceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEeh
Confidence 7889999999999999999987543 89999999999999864211 1111
Q ss_pred ---eccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce------eEEeccCCCceEEEEecCCCCeEEEEEeCCC
Q 002591 661 ---LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS------LRTFMGHSASVMSLDFHPNKDDLICSCDGDG 731 (903)
Q Consensus 661 ---l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~------~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg 731 (903)
+-+|.+.|.++.|+|.+..|++++.|+++.||.-++..-. +-...+.....+..-|+|+++.+ ++-+.-|
T Consensus 260 eall~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~i-i~~g~~G 338 (764)
T KOG1063|consen 260 EALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVI-IAHGRTG 338 (764)
T ss_pred hhhhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEE-EEecccC
Confidence 2389999999999999999999999999999988763111 12223345568889999998644 4777889
Q ss_pred cEEEEEcCCCe-e--eEEe---ecCceeEEEecCCCEEEEEEcCCeEEEEECC----CCeEEEEecCCCCCeEEEEEcCC
Q 002591 732 EIRYWSINNGS-C--TRVF---KGGTAQMRFQPHLGRYLAAAAENVVSILDAE----TQACRLSLQGHTKPIDSVCWDPS 801 (903)
Q Consensus 732 ~I~iwDi~t~~-~--~~~~---~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~----t~~~~~~l~~h~~~V~sl~~spd 801 (903)
..++|...... + ...+ ...+..+.|.|.|.++++++.|-+-++|-.- +...+..-..|...++|++|-+.
T Consensus 339 g~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~ 418 (764)
T KOG1063|consen 339 GFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNE 418 (764)
T ss_pred cEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccC
Confidence 99999833321 1 1122 3457889999999999999999999998654 11223333458889999999986
Q ss_pred CCEEEEEeCC-eEEEEECCCC-------------------------------------------CC--------------
Q 002591 802 GELLASVSED-SVRVWTVGSG-------------------------------------------SE-------------- 823 (903)
Q Consensus 802 g~~lasgs~d-~I~iwdl~s~-------------------------------------------~~-------------- 823 (903)
...|++|.+. -+|+|+.... ..
T Consensus 419 ~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~ 498 (764)
T KOG1063|consen 419 DLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPC 498 (764)
T ss_pred CceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCch
Confidence 5567777777 7899975311 00
Q ss_pred ----------------cceEEEeecCCCceEEEEEeCCCCEEEEEECCC-----eEEEEECCCCcEE-EEccCCCCEEEE
Q 002591 824 ----------------GECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ-----SLELWNMSENKTM-TLTAHEGLIAAL 881 (903)
Q Consensus 824 ----------------~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg-----~I~vwdl~~~~~~-~~~~h~~~V~sl 881 (903)
...++.+-+|+..|.+++.+|+++.+++++... .|++|+..+.... .+..|.-.|+.+
T Consensus 499 ~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l 578 (764)
T KOG1063|consen 499 ELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRL 578 (764)
T ss_pred hccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEE
Confidence 001123457888999999999999999988653 7999999887776 699999999999
Q ss_pred EEecCCCEEEEEecCCcEEEcC
Q 002591 882 AVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 882 ~~spdg~~LaSgs~DG~I~IWd 903 (903)
+|+|||+||++.|.|.++.+|+
T Consensus 579 ~FSpdg~~LLsvsRDRt~sl~~ 600 (764)
T KOG1063|consen 579 AFSPDGRYLLSVSRDRTVSLYE 600 (764)
T ss_pred EECCCCcEEEEeecCceEEeee
Confidence 9999999999999999999995
No 157
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.82 E-value=1.5e-16 Score=178.81 Aligned_cols=293 Identities=30% Similarity=0.495 Sum_probs=231.9
Q ss_pred CCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC-
Q 002591 601 GGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGH-DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP- 678 (903)
Q Consensus 601 ~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~-Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~- 678 (903)
....|+... .......+..|...|.+++|++++.++++++. |+.+++|++.+++.+..+.+|...|.+++|+|++.
T Consensus 135 ~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 212 (466)
T COG2319 135 TVKLWDLST--PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGL 212 (466)
T ss_pred cEEEEEecC--CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcce
Confidence 344454432 25778889999999999999999998988885 99999999999899999999999999999999998
Q ss_pred EEEEEeCCCcEEEEeCCCCCceeE-EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee-eEEe---ecCcee
Q 002591 679 RLATSSFDKTVRVWDADNPGYSLR-TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC-TRVF---KGGTAQ 753 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~~-~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~-~~~~---~~~~~~ 753 (903)
.+++++.|+.|++||... +..+. .+.+|...+ ...|++++ .++++++.|+.+++||++.... ...+ ...+..
T Consensus 213 ~~~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 289 (466)
T COG2319 213 LIASGSSDGTIRLWDLST-GKLLRSTLSGHSDSV-VSSFSPDG-SLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLS 289 (466)
T ss_pred EEEEecCCCcEEEEECCC-CcEEeeecCCCCcce-eEeECCCC-CEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEE
Confidence 555558999999999885 55666 688888876 44899998 4556999999999999987664 4444 345677
Q ss_pred EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEec--CCCCCeEEEEEcCCCCEEEEE-eCC-eEEEEECCCCCCcceEEE
Q 002591 754 MRFQPHLGRYLAAAAENVVSILDAETQACRLSLQ--GHTKPIDSVCWDPSGELLASV-SED-SVRVWTVGSGSEGECVHE 829 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~--~h~~~V~sl~~spdg~~lasg-s~d-~I~iwdl~s~~~~~~i~~ 829 (903)
+.|.|++..+++++.|+.+.+||..+........ .|...|..+.|.+++..++.+ ..+ .+.+|++.... ....
T Consensus 290 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~ 366 (466)
T COG2319 290 VAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK---PLKT 366 (466)
T ss_pred EEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc---eeEE
Confidence 7899988888888888889999999887777665 788889999994332555555 566 78889998764 2222
Q ss_pred eecCCCceEEEEEeCCCCEEEE-EECCCeEEEEECCCCcEEEEccCC-CCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 830 LSCNGNKFHSCVFHPTYPSLLV-IGCYQSLELWNMSENKTMTLTAHE-GLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 830 ~~~~~~~i~si~~sp~g~~l~t-~s~dg~I~vwdl~~~~~~~~~~h~-~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
... ...+..+.+.+ ...++. +..++.+.+|+............. ..+..+.+.+++.++++++.++.+++|+
T Consensus 367 ~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (466)
T COG2319 367 LEG-HSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWD 440 (466)
T ss_pred ecC-CceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEe
Confidence 222 22278888888 533444 578899999999999888555544 8899999999999999999999999995
No 158
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.82 E-value=7.4e-17 Score=181.36 Aligned_cols=282 Identities=31% Similarity=0.550 Sum_probs=228.4
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-eeEEeccCC-CCeEEEEE-CCCCC-EEEEEeC-CCcEEEE
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK-SKTNLEEHS-SLITDVRF-SPSMP-RLATSSF-DKTVRVW 692 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~-~~~~l~~h~-~~V~~l~f-spdg~-~Lasgs~-Dg~I~IW 692 (903)
.+..|...|.++.|.+.+..++.++.|+.|.+|+..... .+..+..+. ..+..+.+ ++++. +++..+. |+.+++|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 566899999999999999999999999999999998776 677777644 37888888 88887 5555455 9999999
Q ss_pred eCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeC-CCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEEEE-E
Q 002591 693 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG-DGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYLAA-A 767 (903)
Q Consensus 693 Dl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~-Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll~~-s 767 (903)
|+.........+..|...|.+++|+|++. ++++++. |+.+++|++..++.+..+.. .+..+.|.+++..++++ +
T Consensus 140 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 218 (466)
T COG2319 140 DLSTPGKLIRTLEGHSESVTSLAFSPDGK-LLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGS 218 (466)
T ss_pred EecCCCeEEEEEecCcccEEEEEECCCCC-EEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEec
Confidence 99864567788889999999999999988 4446664 99999999998777777664 57788899888744444 8
Q ss_pred cCCeEEEEECCCCeEEE-EecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 768 AENVVSILDAETQACRL-SLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~~~-~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
.|+.|++||...+..+. .+.+|...+ ...|++++.++++++.+ .+++|+++.... .+..+..|...+.++.|.|+
T Consensus 219 ~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~ 295 (466)
T COG2319 219 SDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS--LLRTLSGHSSSVLSVAFSPD 295 (466)
T ss_pred CCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc--EEEEEecCCccEEEEEECCC
Confidence 89999999999888887 688888876 44899999888888888 999999987644 23333566889999999998
Q ss_pred CCEEEEEECCCeEEEEECCCCcEE-EEc--cCCCCEEEEEEecCCCEEEEE-ecCCcEEEcC
Q 002591 846 YPSLLVIGCYQSLELWNMSENKTM-TLT--AHEGLIAALAVSTETGYVASA-SHDKFVKLWK 903 (903)
Q Consensus 846 g~~l~t~s~dg~I~vwdl~~~~~~-~~~--~h~~~V~sl~~spdg~~LaSg-s~DG~I~IWd 903 (903)
+..+++++.|+.+.+||+...... ... .|...|..+.|.+++..++.+ ..|+.+++|+
T Consensus 296 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 357 (466)
T COG2319 296 GKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWD 357 (466)
T ss_pred CCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeee
Confidence 888998999988999999888766 333 788889999994332455555 6888898885
No 159
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.81 E-value=8.7e-19 Score=191.95 Aligned_cols=242 Identities=19% Similarity=0.267 Sum_probs=198.1
Q ss_pred ceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEE
Q 002591 656 KSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRY 735 (903)
Q Consensus 656 ~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~i 735 (903)
.+-..+++|++.|.||...|.|.+|++|+.||+|+||.+.+ +.|++++. ..+.|.||+|+|.....+++...+..+.|
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~T-gRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~~~~i 468 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIAT-GRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGECVLI 468 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeec-ceEEEEEe-ecceeEEEEecCCCCceeEEEEecCceEE
Confidence 34456789999999999999999999999999999999998 88888876 45689999999987765545444555655
Q ss_pred EEcCCCe---------------------------------------eeE-EeecCceeEEEecCCCEEEEEEcC---CeE
Q 002591 736 WSINNGS---------------------------------------CTR-VFKGGTAQMRFQPHLGRYLAAAAE---NVV 772 (903)
Q Consensus 736 wDi~t~~---------------------------------------~~~-~~~~~~~~v~~sp~~~~ll~~s~d---g~I 772 (903)
.+..-|. |+. .....+..+.|+..|.+|++...+ ..|
T Consensus 469 vnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~V 548 (733)
T KOG0650|consen 469 VNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSV 548 (733)
T ss_pred eCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceE
Confidence 5543221 010 112245678899999999998775 479
Q ss_pred EEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEE
Q 002591 773 SILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVI 852 (903)
Q Consensus 773 ~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~ 852 (903)
.|+++...+....|....+.|.++.|+|...+|++++...|+|||+... ..++.+......|..++.||.|..|+++
T Consensus 549 liHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kq---elvKkL~tg~kwiS~msihp~GDnli~g 625 (733)
T KOG0650|consen 549 LIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQ---ELVKKLLTGSKWISSMSIHPNGDNLILG 625 (733)
T ss_pred EEEecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHH---HHHHHHhcCCeeeeeeeecCCCCeEEEe
Confidence 9999988877777766778899999999999999999999999999765 5555555557789999999999999999
Q ss_pred ECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 853 GCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 853 s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
+.|+.++.||+.-.... ++..|...|++++|++.-.+|++|+.||++.||
T Consensus 626 s~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vf 677 (733)
T KOG0650|consen 626 SYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVF 677 (733)
T ss_pred cCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEE
Confidence 99999999999766433 788999999999999999999999999999886
No 160
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.81 E-value=2.1e-19 Score=179.69 Aligned_cols=284 Identities=18% Similarity=0.195 Sum_probs=201.3
Q ss_pred eeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 002591 614 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTVRVW 692 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~IW 692 (903)
.+...+++|.+.|+|+.|-.++ +|.+|..-|.|++|++.+.+.+..++ .|...|+.+.--|+ ..|.+-+.|+.+.+|
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~~-rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw 82 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQANE-RLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILW 82 (323)
T ss_pred CCeeEeccccchheehhhccch-hhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEE
Confidence 3567788999999999998877 48899999999999999999999998 67889999998887 578888999999999
Q ss_pred eCCCCCceeEEeccCCCceEEEEecCCC-----C---eEEEEEeCC-CcEEEEEcCCCeeeEEee-------cCceeEEE
Q 002591 693 DADNPGYSLRTFMGHSASVMSLDFHPNK-----D---DLICSCDGD-GEIRYWSINNGSCTRVFK-------GGTAQMRF 756 (903)
Q Consensus 693 Dl~~~~~~~~~~~~h~~~V~sl~fsp~~-----~---~ll~sgs~D-g~I~iwDi~t~~~~~~~~-------~~~~~v~~ 756 (903)
++.. +. ....|.-.+.++.|.+.. . .+++.-++. ..+.+-|......+...+ +.+.+..+
T Consensus 83 ~ia~-s~---~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~ 158 (323)
T KOG0322|consen 83 TIAY-SA---FISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDK 158 (323)
T ss_pred EccC-cc---eEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeec
Confidence 9975 22 222344445555555431 1 111111100 001111211111111111 12222332
Q ss_pred ecCC--C-EEEEEEcCCeEEEEECCCCe----------EEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC
Q 002591 757 QPHL--G-RYLAAAAENVVSILDAETQA----------CRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGS 822 (903)
Q Consensus 757 sp~~--~-~ll~~s~dg~I~i~D~~t~~----------~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~ 822 (903)
.... . .+++|..+|.|.+||+.++. .+.....|..+|.++.|.+.-..=++++.+ .+..|.+....
T Consensus 159 ~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~ 238 (323)
T KOG0322|consen 159 DHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHST 238 (323)
T ss_pred cccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeecccc
Confidence 2221 2 35556678999999999983 334455689999999999765555566666 88888886542
Q ss_pred -CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEE
Q 002591 823 -EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVK 900 (903)
Q Consensus 823 -~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~ 900 (903)
....-.++....-.+..+.+-||++.+++++.|+.|+||..++...+ .+.-|.+.|.+++|+|+..++|+++.|+.|.
T Consensus 239 gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rIS 318 (323)
T KOG0322|consen 239 GSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARIS 318 (323)
T ss_pred CcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEE
Confidence 11222233333556888899999999999999999999999999988 7888999999999999999999999999999
Q ss_pred EcC
Q 002591 901 LWK 903 (903)
Q Consensus 901 IWd 903 (903)
+||
T Consensus 319 LWk 321 (323)
T KOG0322|consen 319 LWK 321 (323)
T ss_pred eee
Confidence 997
No 161
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=2.5e-18 Score=175.67 Aligned_cols=248 Identities=16% Similarity=0.250 Sum_probs=183.4
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEE-EEEeCCCcEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRL-ATSSFDKTVR 690 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~L-asgs~Dg~I~ 690 (903)
++...+.+.+|..+|+|++||+||+.|+|++.|..|++||+..+.+++.++ ...+|+.+.|+|..... +++-.+..-.
T Consensus 54 T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~ 132 (405)
T KOG1273|consen 54 TFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPV 132 (405)
T ss_pred ccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcE
Confidence 444556677899999999999999999999999999999999999888886 56789999999975533 3333344455
Q ss_pred EEeCCCCCceeEEecc---CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----CceeEEEecCCCEE
Q 002591 691 VWDADNPGYSLRTFMG---HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----GTAQMRFQPHLGRY 763 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~---h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----~~~~v~~sp~~~~l 763 (903)
+-++..+...+..... ......+..|.+.|+++ ++|...|.+.++|..+.+|+..++- .+..+.++-.+..|
T Consensus 133 vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yI-itGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~l 211 (405)
T KOG1273|consen 133 VIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYI-ITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFL 211 (405)
T ss_pred EEEecCCceeeccCCCccccccccccccccCCCCEE-EEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEE
Confidence 5555542111111110 11112223577777755 5999999999999999999988764 45678899999999
Q ss_pred EEEEcCCeEEEEECCCC-------e--EEEEecC--CCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEe
Q 002591 764 LAAAAENVVSILDAETQ-------A--CRLSLQG--HTKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGECVHEL 830 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t~-------~--~~~~l~~--h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~ 830 (903)
+.-+.|..|+.|+++.- + +.+++.. ....-.+++|+.+|.|++.++.. .++||.-..| ..++.+
T Consensus 212 iiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~G---sLVKIL 288 (405)
T KOG1273|consen 212 IINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIG---SLVKIL 288 (405)
T ss_pred EEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCccEEEeccccceeEEEEecCCc---ceeeee
Confidence 99999999999998631 1 1111111 23345689999999999998876 8999999887 566666
Q ss_pred ecCC-CceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 002591 831 SCNG-NKFHSCVFHPTYPSLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 831 ~~~~-~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~ 865 (903)
.+.. .....+.|+|-...|++. ..|.|++|....
T Consensus 289 hG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 289 HGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred cCCchhheeecccccceeeeeec-cCCceEEEEeec
Confidence 6655 567889999988877766 778999998754
No 162
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.80 E-value=7.2e-18 Score=178.02 Aligned_cols=295 Identities=21% Similarity=0.292 Sum_probs=202.5
Q ss_pred ccccCCCCCceEEeeecCCCCCcCCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC--
Q 002591 576 LVEDGSLDDNVESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD-- 653 (903)
Q Consensus 576 ~~~~gs~d~~v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~-- 653 (903)
.++.++.|.++..|.-....... + ....+....+..|...|++|.|+|+|.+||+|+.+|.|.+|...
T Consensus 28 ~laT~G~D~~iriW~v~r~~~~~--~--------~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~ 97 (434)
T KOG1009|consen 28 KLATAGGDKDIRIWKVNRSEPGG--G--------DMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDV 97 (434)
T ss_pred ceecccCccceeeeeeeecCCCC--C--------ceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCc
Confidence 44555566666666432211110 0 02567778899999999999999999999999999999999754
Q ss_pred ------C--------CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCC
Q 002591 654 ------T--------LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN 719 (903)
Q Consensus 654 ------t--------~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~ 719 (903)
+ ....+.+.+|...|..++|++++.++++++.|..+++||+.. +.....+.+|...|..++|.|.
T Consensus 98 ~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~-G~l~~~~~dh~~yvqgvawDpl 176 (434)
T KOG1009|consen 98 RIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHA-GQLLAILDDHEHYVQGVAWDPL 176 (434)
T ss_pred CCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEecc-ceeEeeccccccccceeecchh
Confidence 2 345567789999999999999999999999999999999998 8889999999999999999998
Q ss_pred CCeEEEEEeCCCcEEEEEcCCCeeeEEeecCcee-EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEE
Q 002591 720 KDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQ-MRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCW 798 (903)
Q Consensus 720 ~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~-v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~ 798 (903)
+.+ +++-+.|...+.+.+.....+......+.. ..+... .....++|--++.+ .-...++|
T Consensus 177 ~qy-v~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~--------e~~s~rLfhDeTlk---------sFFrRlsf 238 (434)
T KOG1009|consen 177 NQY-VASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNER--------EGKSTRLFHDETLK---------SFFRRLSF 238 (434)
T ss_pred hhh-hhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCC--------CcceeeeeecCchh---------hhhhhccc
Confidence 664 557788887777777655544333210000 000000 11123333333222 23456788
Q ss_pred cCCCCEEEEEeCC----------eEEEEECCCCCCcceEEEeecCCCceEEEEEeC-----------------CCCEEEE
Q 002591 799 DPSGELLASVSED----------SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP-----------------TYPSLLV 851 (903)
Q Consensus 799 spdg~~lasgs~d----------~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp-----------------~g~~l~t 851 (903)
+|+|.++++.+.- ..++|+-... ...+..+.+-......+.|+| -.+.+++
T Consensus 239 TPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l--~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfa 316 (434)
T KOG1009|consen 239 TPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDL--KRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFA 316 (434)
T ss_pred CCCCcEEEcccceeeeCCceeeceeEeeccccc--cCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEE
Confidence 8888887765421 2344443322 223333333344444444433 2344566
Q ss_pred EECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 852 IGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 852 ~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
....+.|+|||..+.+.+ .-.-|-..|++++|++||.+|+..|.||...+
T Consensus 317 iAt~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~ 368 (434)
T KOG1009|consen 317 IATKNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSL 368 (434)
T ss_pred EeecceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEE
Confidence 666779999999998877 44468999999999999999999999997653
No 163
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.80 E-value=5.7e-20 Score=207.19 Aligned_cols=275 Identities=21% Similarity=0.373 Sum_probs=217.5
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
..+.++.+.+|...|+|+.|...|.++++|+.|..|+||..+++.++..+++|.+.|++++.+.+...+++++.|..|++
T Consensus 179 kmk~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrv 258 (1113)
T KOG0644|consen 179 KMKNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRV 258 (1113)
T ss_pred HHHHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEE
Confidence 45667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE-----ee--cCceeEEEecCCCEEE
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV-----FK--GGTAQMRFQPHLGRYL 764 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~-----~~--~~~~~v~~sp~~~~ll 764 (903)
|.+.+ +.++..+.+|++.|++|+|+|.- +.+.||++++||.+-...+.. +. .-+..+.+...+..++
T Consensus 259 Wrl~~-~~pvsvLrghtgavtaiafsP~~-----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~ 332 (1113)
T KOG0644|consen 259 WRLPD-GAPVSVLRGHTGAVTAIAFSPRA-----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFL 332 (1113)
T ss_pred EecCC-CchHHHHhccccceeeeccCccc-----cCCCCCceEeccccccccccCCCCCCcccccceeeeeccccccccc
Confidence 99998 88899999999999999999863 778899999999982211111 11 1233455666777888
Q ss_pred EEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCC-CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEE
Q 002591 765 AAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSG-ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVF 842 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg-~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~ 842 (903)
+++.|+.-..|...... .+...+.-+.++.+- .+.+++-.+ .+++|++.++ ..++.+.+|...+..+.+
T Consensus 333 Tgs~d~ea~n~e~~~l~------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g---~l~H~l~ghsd~~yvLd~ 403 (1113)
T KOG0644|consen 333 TGSRDGEARNHEFEQLA------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTG---QLLHNLMGHSDEVYVLDV 403 (1113)
T ss_pred cccCCcccccchhhHhh------hhccceEEEeccccccccceeeeeeeEeeeeecccc---hhhhhhcccccceeeeee
Confidence 88888887777654321 122222222333232 355555556 8999999887 566777788899999999
Q ss_pred eCCCCEE-EEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 843 HPTYPSL-LVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 843 sp~g~~l-~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
||-...+ ..++.||.+.|||+-.+..+ ...+ .+.+...+|++||..++...+-|.++|.
T Consensus 404 Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g-h~kl~d~kFSqdgts~~lsd~hgql~i~ 465 (1113)
T KOG0644|consen 404 HPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG-HGKLVDGKFSQDGTSIALSDDHGQLYIL 465 (1113)
T ss_pred cCCCcHhhhhccCCCceEeeecccCCcceeeecc-cceeeccccCCCCceEecCCCCCceEEe
Confidence 9976554 56789999999999998877 3334 5567778999999988888777887774
No 164
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.80 E-value=5.3e-18 Score=180.79 Aligned_cols=233 Identities=15% Similarity=0.345 Sum_probs=180.7
Q ss_pred EEEEECC-------CCCEEEEEeCCCcEEEEeCCCCC--ceeE------------------EeccCCCceEEEEecCCCC
Q 002591 669 TDVRFSP-------SMPRLATSSFDKTVRVWDADNPG--YSLR------------------TFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 669 ~~l~fsp-------dg~~Lasgs~Dg~I~IWDl~~~~--~~~~------------------~~~~h~~~V~sl~fsp~~~ 721 (903)
.|+.|.. .|+++|.|+.|-.|.|||++-.. .+.. .-.+|++.|.++.|+..-+
T Consensus 177 LC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~ 256 (463)
T KOG0270|consen 177 LCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFR 256 (463)
T ss_pred hhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccc
Confidence 5667643 36799999999999999986211 1111 1236999999999999989
Q ss_pred eEEEEEeCCCcEEEEEcCCCeeeEEee---cCceeEEEecCCC-EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEE
Q 002591 722 DLICSCDGDGEIRYWSINNGSCTRVFK---GGTAQMRFQPHLG-RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVC 797 (903)
Q Consensus 722 ~ll~sgs~Dg~I~iwDi~t~~~~~~~~---~~~~~v~~sp~~~-~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~ 797 (903)
++|++|+.|.+|++||+.++++..++. ..+.++.|++... .+++|+.|++|.++|.|........-...+.|..++
T Consensus 257 nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~ 336 (463)
T KOG0270|consen 257 NVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVA 336 (463)
T ss_pred eeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEE
Confidence 999999999999999999999988775 4678899999874 577788899999999995433222222457899999
Q ss_pred EcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCC-EEEEEECCCeEEEEECCCCcEEEEccC
Q 002591 798 WDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYP-SLLVIGCYQSLELWNMSENKTMTLTAH 874 (903)
Q Consensus 798 ~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~-~l~t~s~dg~I~vwdl~~~~~~~~~~h 874 (903)
|.+... .++++.+| +|+-+|+|... +++..+..|...|.+++++..-+ .+++++.|+.|++|++..........|
T Consensus 337 w~~~se~~f~~~tddG~v~~~D~R~~~--~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~ 414 (463)
T KOG0270|consen 337 WDPHSENSFFVSTDDGTVYYFDIRNPG--KPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEH 414 (463)
T ss_pred ecCCCceeEEEecCCceEEeeecCCCC--CceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccc
Confidence 999766 55666666 99999999764 88999999999999999988654 577889999999999876655433333
Q ss_pred C---CCEEEEEEecCCC-EEEEEecCCcEEEcC
Q 002591 875 E---GLIAALAVSTETG-YVASASHDKFVKLWK 903 (903)
Q Consensus 875 ~---~~V~sl~~spdg~-~LaSgs~DG~I~IWd 903 (903)
. +...|+++.|+-. +++.|+..+.++|||
T Consensus 415 ~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd 447 (463)
T KOG0270|consen 415 SFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWD 447 (463)
T ss_pred cccccceeecccCCCcceEEEecCccceEEEee
Confidence 2 3466677777655 577788888899997
No 165
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.79 E-value=1.3e-17 Score=183.01 Aligned_cols=136 Identities=23% Similarity=0.406 Sum_probs=110.3
Q ss_pred EcCCeEEEEECCCCeEE-----EEecCCCCCeEEEEEcC-CCCEEEEEeCC-eEEEEECCCCCC----cceEEEeecCCC
Q 002591 767 AAENVVSILDAETQACR-----LSLQGHTKPIDSVCWDP-SGELLASVSED-SVRVWTVGSGSE----GECVHELSCNGN 835 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~-----~~l~~h~~~V~sl~~sp-dg~~lasgs~d-~I~iwdl~s~~~----~~~i~~~~~~~~ 835 (903)
+..|.|-||+++..-.+ -.+ -....|+.+.|+| |...|+++++| .|++|.+..+.. ...-..+..|..
T Consensus 600 g~gG~iai~el~~PGrLPDgv~p~l-~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~e 678 (1012)
T KOG1445|consen 600 GSGGVIAIYELNEPGRLPDGVMPGL-FNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGE 678 (1012)
T ss_pred CCCceEEEEEcCCCCCCCccccccc-ccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccc
Confidence 33567777777653111 111 1346799999999 56689999988 999999986532 334567788999
Q ss_pred ceEEEEEeCC-CCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 836 KFHSCVFHPT-YPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 836 ~i~si~~sp~-g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.|+++.|||- .+.|++++.|-+|++||+.+.+.. .+.+|.+.|.+++|+|||+.+++.|.||+|++|+
T Consensus 679 KI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~ 748 (1012)
T KOG1445|consen 679 KITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYE 748 (1012)
T ss_pred eEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeC
Confidence 9999999994 467889999999999999999877 8999999999999999999999999999999985
No 166
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=2.4e-18 Score=178.03 Aligned_cols=267 Identities=16% Similarity=0.291 Sum_probs=191.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCCCce-eEEeccCC-Cce
Q 002591 636 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSP--SMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHS-ASV 711 (903)
Q Consensus 636 ~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fsp--dg~~Lasgs~Dg~I~IWDl~~~~~~-~~~~~~h~-~~V 711 (903)
..+|++...|.|+|||..++..+..|+++...++.++|.. ....+++|+.||+|++||++...+. ...+..+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5789999999999999999999999999999999999977 4568999999999999999975443 34455555 455
Q ss_pred EEEEecCCCCeEEEEEeC----CCcEEEEEcCCCee-eEE----eecCceeEEEecCC-CEEEEEEcCCeEEEEECCCCe
Q 002591 712 MSLDFHPNKDDLICSCDG----DGEIRYWSINNGSC-TRV----FKGGTAQMRFQPHL-GRYLAAAAENVVSILDAETQA 781 (903)
Q Consensus 712 ~sl~fsp~~~~ll~sgs~----Dg~I~iwDi~t~~~-~~~----~~~~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~ 781 (903)
.|++.... ..++++|.. |-.|.+||++..+. ++. +...+++++|+|.+ +.+++|+.||.|.+||++...
T Consensus 121 ~~ld~nck-~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~ 199 (376)
T KOG1188|consen 121 ICLDLNCK-KNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN 199 (376)
T ss_pred eEeeccCc-CCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence 56665434 447766643 67899999998765 444 34578999999988 567778889999999998652
Q ss_pred ---EEEEecCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEee---------cCCCceEEEEEeCCCC
Q 002591 782 ---CRLSLQGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELS---------CNGNKFHSCVFHPTYP 847 (903)
Q Consensus 782 ---~~~~l~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~---------~~~~~i~si~~sp~g~ 847 (903)
.+.....|...|.++.|..++. .|.+-+.. +..+|+++.+.....+..-. ..-..+..+....+..
T Consensus 200 EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~~~~ 279 (376)
T KOG1188|consen 200 EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPGDKD 279 (376)
T ss_pred chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCCCcc
Confidence 2223334778899999998873 45555555 99999998774221111100 0011222333334555
Q ss_pred EEEEEEC-CCeEEEEECC---CCcEE----EEc-cCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 848 SLLVIGC-YQSLELWNMS---ENKTM----TLT-AHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 848 ~l~t~s~-dg~I~vwdl~---~~~~~----~~~-~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.+++++. .++..++-+. ++... .+. +|...|+++.|...+.+++||++||.|.+|+
T Consensus 280 ~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk 344 (376)
T KOG1188|consen 280 TCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK 344 (376)
T ss_pred eEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence 6666655 4555555433 33222 344 4788899999999999999999999999996
No 167
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.79 E-value=3.8e-18 Score=178.21 Aligned_cols=206 Identities=26% Similarity=0.425 Sum_probs=165.3
Q ss_pred eccCCCCeEEEEECCCCC--EEEEEeCCCcEEEEeCCC---------------CCceeEEeccCCCceEEEEecCCCCeE
Q 002591 661 LEEHSSLITDVRFSPSMP--RLATSSFDKTVRVWDADN---------------PGYSLRTFMGHSASVMSLDFHPNKDDL 723 (903)
Q Consensus 661 l~~h~~~V~~l~fspdg~--~Lasgs~Dg~I~IWDl~~---------------~~~~~~~~~~h~~~V~sl~fsp~~~~l 723 (903)
...|.+.|+.++-++-++ ++++=+..|.|.|||+.. ...++.++.+|...=+.|+|+|-....
T Consensus 147 ~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~ 226 (440)
T KOG0302|consen 147 SIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR 226 (440)
T ss_pred ccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence 346788888888877654 455556789999999852 134577888999989999999865444
Q ss_pred EEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCC
Q 002591 724 ICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGE 803 (903)
Q Consensus 724 l~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~ 803 (903)
+++|..-+.|++|...++..... ...|.+|+..|..++|+|..+
T Consensus 227 LlsGDc~~~I~lw~~~~g~W~vd------------------------------------~~Pf~gH~~SVEDLqWSptE~ 270 (440)
T KOG0302|consen 227 LLSGDCVKGIHLWEPSTGSWKVD------------------------------------QRPFTGHTKSVEDLQWSPTED 270 (440)
T ss_pred cccCccccceEeeeeccCceeec------------------------------------CccccccccchhhhccCCccC
Confidence 55787778888887766542110 113456999999999999766
Q ss_pred -EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcE---E-EEccCCCC
Q 002591 804 -LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKT---M-TLTAHEGL 877 (903)
Q Consensus 804 -~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~---~-~~~~h~~~ 877 (903)
+|++|+.| +|+|||+|.+....++.. +.|...|+.|.|+....+|++|+.||+++|||++..+. + .+.-|..+
T Consensus 271 ~vfaScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~p 349 (440)
T KOG0302|consen 271 GVFASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAP 349 (440)
T ss_pred ceEEeeecCceEEEEEecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCC
Confidence 89999999 999999999877677766 78899999999999999999999999999999986543 3 88899999
Q ss_pred EEEEEEecC-CCEEEEEecCCcEEEcC
Q 002591 878 IAALAVSTE-TGYVASASHDKFVKLWK 903 (903)
Q Consensus 878 V~sl~~spd-g~~LaSgs~DG~I~IWd 903 (903)
|++|.|+|. ...|++++.|..|.|||
T Consensus 350 ItsieW~p~e~s~iaasg~D~QitiWD 376 (440)
T KOG0302|consen 350 ITSIEWHPHEDSVIAASGEDNQITIWD 376 (440)
T ss_pred eeEEEeccccCceEEeccCCCcEEEEE
Confidence 999999985 45788889999999997
No 168
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.78 E-value=1.6e-17 Score=168.07 Aligned_cols=299 Identities=19% Similarity=0.243 Sum_probs=203.6
Q ss_pred eEEeeecCCCCCcCCCCcccccccCcceeeeeEeecCCCCeEEEEEcCCC-CEEEEEeCC-------CcEEEEECCC---
Q 002591 586 VESFLSHDDTDPRDAGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDG-KLLATGGHD-------KKAVLWHTDT--- 654 (903)
Q Consensus 586 v~~~~~~d~~~~~~~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg-~~Latgs~D-------g~V~vWd~~t--- 654 (903)
-.+|+........+.-+..++...+...-..+.|..|.+.|+.|+-+|-. ++|+|+..+ ..+.||.+..
T Consensus 26 ~icFlvgTnslK~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~ 105 (370)
T KOG1007|consen 26 HICFLVGTNSLKEDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLG 105 (370)
T ss_pred ceEEEEeccccCCcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccC
Confidence 33455444444444444455554444555566788899999999999955 466665432 2478998753
Q ss_pred ------CceeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEec-----cCCCceEEEEecCC-CC
Q 002591 655 ------LKSKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM-----GHSASVMSLDFHPN-KD 721 (903)
Q Consensus 655 ------~~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~-----~h~~~V~sl~fsp~-~~ 721 (903)
.+++..+. .+-+.|.||.|.|++..|++-. |..|.+|++.+..+.+..+. ++....++-+|+|. ..
T Consensus 106 ~S~~~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdg 184 (370)
T KOG1007|consen 106 QSNSSTLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDG 184 (370)
T ss_pred ccccchhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCcc
Confidence 23344444 4667899999999999998877 88899999998555333332 35667888999983 23
Q ss_pred eEEEEEeCCCcEEEEEcCCCeeeEEeec-C---ceeEEEecCCCEEE-EEEcCCeEEEEECCCC-eEEEEecCCCCCeEE
Q 002591 722 DLICSCDGDGEIRYWSINNGSCTRVFKG-G---TAQMRFQPHLGRYL-AAAAENVVSILDAETQ-ACRLSLQGHTKPIDS 795 (903)
Q Consensus 722 ~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-~---~~~v~~sp~~~~ll-~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~s 795 (903)
+.+++ ..|+++..||+++.++...++. + +..+.|.|+..+++ +++.||.|+|||.+.. .++.++.+|..+|.+
T Consensus 185 nqv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~ 263 (370)
T KOG1007|consen 185 NQVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWA 263 (370)
T ss_pred ceEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEE
Confidence 34434 4489999999999887766653 3 66788999886654 5566899999999875 678899999999999
Q ss_pred EEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEcc
Q 002591 796 VCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTA 873 (903)
Q Consensus 796 l~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~ 873 (903)
+.|+|... +|.+++.| .|.+|...+-.... .+.|..+....-.......++ -+..|.+.++..
T Consensus 264 VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~-------------qi~~~~dese~e~~dseer~k--pL~dg~l~tyde 328 (370)
T KOG1007|consen 264 VRFNPEHDQLILSGGSDSAVNLSCASSVSSEQ-------------QIEFEDDESESEDEDSEERVK--PLQDGQLETYDE 328 (370)
T ss_pred EEecCccceEEEecCCCceeEEEecccccccc-------------ccccccccccCcchhhHHhcc--cccccccccccc
Confidence 99999655 88888888 89999875432111 111111100000000001222 344555567889
Q ss_pred CCCCEEEEEEecCCC-EEEEEecCCcEEE
Q 002591 874 HEGLIAALAVSTETG-YVASASHDKFVKL 901 (903)
Q Consensus 874 h~~~V~sl~~spdg~-~LaSgs~DG~I~I 901 (903)
|++.|++++|+.-.. +||+-+.||+|.|
T Consensus 329 hEDSVY~~aWSsadPWiFASLSYDGRviI 357 (370)
T KOG1007|consen 329 HEDSVYALAWSSADPWIFASLSYDGRVII 357 (370)
T ss_pred cccceEEEeeccCCCeeEEEeccCceEEe
Confidence 999999999987555 5788899999876
No 169
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=1.2e-16 Score=184.62 Aligned_cols=279 Identities=15% Similarity=0.222 Sum_probs=208.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccC---CCCeEEEEECC--CCCEEEEEeCCCcEEEEeCCCC
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH---SSLITDVRFSP--SMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h---~~~V~~l~fsp--dg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
...-..+.|+|-...++++...-.|+|||.+.++.+..|..+ ...|+.+.+-. |..++++|+.||.||||+-...
T Consensus 1064 ~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1064 NQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYAD 1143 (1387)
T ss_pred CCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccccc
Confidence 335667889998889999987789999999999988888754 45789999865 3458999999999999975432
Q ss_pred C----ceeEEeccC-------CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCcee----EE-EecCCC
Q 002591 698 G----YSLRTFMGH-------SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQ----MR-FQPHLG 761 (903)
Q Consensus 698 ~----~~~~~~~~h-------~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~----v~-~sp~~~ 761 (903)
. +.+..+.+- .+.=.-++|....++++++|+ -..|+|||.....++..+..+..+ +. ....++
T Consensus 1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd-~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn 1222 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGD-VRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGN 1222 (1387)
T ss_pred ccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCC-eeEEEEEecccceeEeecccCCCccceeecccccCCc
Confidence 2 223222211 111133678877777775554 789999999998888776543222 22 223468
Q ss_pred EEEEEEcCCeEEEEECCCC---eEEEEecCCCCC--eEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecC-
Q 002591 762 RYLAAAAENVVSILDAETQ---ACRLSLQGHTKP--IDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCN- 833 (903)
Q Consensus 762 ~ll~~s~dg~I~i~D~~t~---~~~~~l~~h~~~--V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~- 833 (903)
.+++|..||.|++||.+.. ..+...+.|... |..+.+-+.|. .|++|+.+ .|++||++.......+.....-
T Consensus 1223 ~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~ 1302 (1387)
T KOG1517|consen 1223 IIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWE 1302 (1387)
T ss_pred eEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccc
Confidence 8999999999999999875 356677788887 99999999776 48888888 9999999985222222222211
Q ss_pred -CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEcc-------CCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 834 -GNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTA-------HEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 834 -~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~-------h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+...+++..|+..+.+++|+. +.|+||++....+..+.. ..+.+.|++|+|..-++|+|+.|.+|.||.
T Consensus 1303 yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs 1379 (1387)
T KOG1517|consen 1303 YGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYS 1379 (1387)
T ss_pred cCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEee
Confidence 335899999999998888888 999999998776553333 345789999999999999999999999983
No 170
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.77 E-value=2.1e-18 Score=185.32 Aligned_cols=291 Identities=19% Similarity=0.305 Sum_probs=227.6
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEECCC--CCEEEEEeCCCc
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRFSPS--MPRLATSSFDKT 688 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~fspd--g~~Lasgs~Dg~ 688 (903)
.+.....|..|.+.|..|.|...|..|++|+.|..|.+||+.++..+..+. +|...|.-..|-|. ...|++++.||.
T Consensus 131 r~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgq 210 (559)
T KOG1334|consen 131 RLRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQ 210 (559)
T ss_pred HhhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCc
Confidence 455667789999999999999999999999999999999999888777765 79999998889875 457999999999
Q ss_pred EEEEeCCCCCce--eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee---------cCceeEEEe
Q 002591 689 VRVWDADNPGYS--LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK---------GGTAQMRFQ 757 (903)
Q Consensus 689 I~IWDl~~~~~~--~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~---------~~~~~v~~s 757 (903)
|++=.+...+.+ ...+..|.+.|..++.-|+..+-|.+|+.|+.|.-+|++.+.....+. .....++..
T Consensus 211 vr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~ 290 (559)
T KOG1334|consen 211 VRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVD 290 (559)
T ss_pred eeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecC
Confidence 999888764544 345667999999999999999999999999999999998875333221 134567788
Q ss_pred cCCC-EEEEEEcCCeEEEEECCCCeEE------EEec------CCCCCeEEEEEcCCCC-EEEEEeCCeEEEEECCCCCC
Q 002591 758 PHLG-RYLAAAAENVVSILDAETQACR------LSLQ------GHTKPIDSVCWDPSGE-LLASVSEDSVRVWTVGSGSE 823 (903)
Q Consensus 758 p~~~-~ll~~s~dg~I~i~D~~t~~~~------~~l~------~h~~~V~sl~~spdg~-~lasgs~d~I~iwdl~s~~~ 823 (903)
|... .+++++.|-.+++||.+.-... ..+- .....|++++|+.++. +|++..+..|++|.-..+..
T Consensus 291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG 370 (559)
T ss_pred CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccC
Confidence 8875 7888888999999998754221 2221 2345699999996655 77766666999995433211
Q ss_pred --c-------ceEE-EeecCCCc--eEEEE-EeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCE
Q 002591 824 --G-------ECVH-ELSCNGNK--FHSCV-FHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGY 889 (903)
Q Consensus 824 --~-------~~i~-~~~~~~~~--i~si~-~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~ 889 (903)
. ..++ .+++|.+. |..+- |-|...|+++|+.-|.|.||+-.+++++ .+.+....|+||.=+|--.+
T Consensus 371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~Pv 450 (559)
T KOG1334|consen 371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPV 450 (559)
T ss_pred CCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCch
Confidence 0 1222 25666543 55554 5678888999888899999999999988 55565669999999999999
Q ss_pred EEEEecCCcEEEc
Q 002591 890 VASASHDKFVKLW 902 (903)
Q Consensus 890 LaSgs~DG~I~IW 902 (903)
||+++-|..|+||
T Consensus 451 LAsSGid~DVKIW 463 (559)
T KOG1334|consen 451 LASSGIDHDVKIW 463 (559)
T ss_pred hhccCCccceeee
Confidence 9999999999999
No 171
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.76 E-value=5.6e-16 Score=172.86 Aligned_cols=263 Identities=12% Similarity=0.194 Sum_probs=181.3
Q ss_pred EEEEeCCCcEEEEECCC-Cc--eeEEeccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCce--eEEeccCCCce
Q 002591 638 LATGGHDKKAVLWHTDT-LK--SKTNLEEHSSLITDVRFSPSMPRLATSSF-DKTVRVWDADNPGYS--LRTFMGHSASV 711 (903)
Q Consensus 638 Latgs~Dg~V~vWd~~t-~~--~~~~l~~h~~~V~~l~fspdg~~Lasgs~-Dg~I~IWDl~~~~~~--~~~~~~h~~~V 711 (903)
+++...++.|.+||+.+ ++ .+..+. +.+....++++|++++|++++. ++.|.+|+++..+.. +.... .....
T Consensus 5 y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p 82 (330)
T PRK11028 5 YIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSP 82 (330)
T ss_pred EEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCc
Confidence 34446789999999963 33 444454 3456788999999999877754 888999999743332 22222 33456
Q ss_pred EEEEecCCCCeEEEEEeCCCcEEEEEcCCC----eeeEEeec--CceeEEEecCCCEEEEEEc-CCeEEEEECCCCeEEE
Q 002591 712 MSLDFHPNKDDLICSCDGDGEIRYWSINNG----SCTRVFKG--GTAQMRFQPHLGRYLAAAA-ENVVSILDAETQACRL 784 (903)
Q Consensus 712 ~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~----~~~~~~~~--~~~~v~~sp~~~~ll~~s~-dg~I~i~D~~t~~~~~ 784 (903)
..++|+|+++.++++...++.|.+||+.+. +.+..+.+ +...+.++|++++++++.. ++.|.+||+++...+.
T Consensus 83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~ 162 (330)
T PRK11028 83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLV 162 (330)
T ss_pred eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccc
Confidence 789999999988877767999999999742 22233322 4566789999998877665 6899999998743221
Q ss_pred -------EecCCCCCeEEEEEcCCCCEEEEEeC-C-eEEEEECCCC-CCcceEEEeecC------CCceEEEEEeCCCCE
Q 002591 785 -------SLQGHTKPIDSVCWDPSGELLASVSE-D-SVRVWTVGSG-SEGECVHELSCN------GNKFHSCVFHPTYPS 848 (903)
Q Consensus 785 -------~l~~h~~~V~sl~~spdg~~lasgs~-d-~I~iwdl~s~-~~~~~i~~~~~~------~~~i~si~~sp~g~~ 848 (903)
.+. .......++|+|+|+++++++. + +|.+||+... ...+.+..+... ......+.++|++++
T Consensus 163 ~~~~~~~~~~-~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~ 241 (330)
T PRK11028 163 AQEPAEVTTV-EGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRH 241 (330)
T ss_pred ccCCCceecC-CCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCE
Confidence 111 1234568999999999888876 3 9999999742 122333333221 112346889999999
Q ss_pred EEEEEC-CCeEEEEECCCCc-EEEEccC---CCCEEEEEEecCCCEEEEEec-CCcEEEcC
Q 002591 849 LLVIGC-YQSLELWNMSENK-TMTLTAH---EGLIAALAVSTETGYVASASH-DKFVKLWK 903 (903)
Q Consensus 849 l~t~s~-dg~I~vwdl~~~~-~~~~~~h---~~~V~sl~~spdg~~LaSgs~-DG~I~IWd 903 (903)
++++.. ++.|.+|++.... ...+..+ ......+.|+|+|++|++++. +++|.+|+
T Consensus 242 lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~ 302 (330)
T PRK11028 242 LYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYE 302 (330)
T ss_pred EEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEE
Confidence 999865 6799999986543 2222222 235668999999999998775 88999984
No 172
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.76 E-value=1.1e-15 Score=170.50 Aligned_cols=261 Identities=13% Similarity=0.156 Sum_probs=180.6
Q ss_pred CCCcccccccCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECC-CCce--eEEeccCCCCeEEEEECC
Q 002591 600 AGGRGMDVSQGFSFKEANSVRASTSKVICCHFSSDGKLLATGG-HDKKAVLWHTD-TLKS--KTNLEEHSSLITDVRFSP 675 (903)
Q Consensus 600 ~~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs-~Dg~V~vWd~~-t~~~--~~~l~~h~~~V~~l~fsp 675 (903)
.....|++...-.++.+..+.. .+....++++|++++|++++ .++.|.+|+++ +++. +.... .......++|+|
T Consensus 12 ~~I~~~~~~~~g~l~~~~~~~~-~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~ 89 (330)
T PRK11028 12 QQIHVWNLNHEGALTLLQVVDV-PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDH 89 (330)
T ss_pred CCEEEEEECCCCceeeeeEEec-CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECC
Confidence 3344455432225566666653 46678899999999887765 47889999987 3332 22222 334567899999
Q ss_pred CCCEEEEEeC-CCcEEEEeCCCCCce---eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE------
Q 002591 676 SMPRLATSSF-DKTVRVWDADNPGYS---LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR------ 745 (903)
Q Consensus 676 dg~~Lasgs~-Dg~I~IWDl~~~~~~---~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~------ 745 (903)
++++|++++. ++.|.+|++++.+.. +..+. +.....+++|+|+++.+++++..++.|++||+.+...+.
T Consensus 90 ~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~ 168 (330)
T PRK11028 90 QGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAE 168 (330)
T ss_pred CCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCc
Confidence 9999988875 889999999753322 22222 334567789999999888888888999999998633221
Q ss_pred -Ee--ecCceeEEEecCCCEEEEEEc-CCeEEEEECCC--C--eEEEEecCC------CCCeEEEEEcCCCCEEEEEeCC
Q 002591 746 -VF--KGGTAQMRFQPHLGRYLAAAA-ENVVSILDAET--Q--ACRLSLQGH------TKPIDSVCWDPSGELLASVSED 811 (903)
Q Consensus 746 -~~--~~~~~~v~~sp~~~~ll~~s~-dg~I~i~D~~t--~--~~~~~l~~h------~~~V~sl~~spdg~~lasgs~d 811 (903)
.. ..+...+.|+|++.+++++.. ++.|.+||++. + +.+..+..+ ......+.|+|++++++++...
T Consensus 169 ~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~ 248 (330)
T PRK11028 169 VTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRT 248 (330)
T ss_pred eecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCC
Confidence 11 123467899999999988876 89999999973 3 333333322 1223468899999988888653
Q ss_pred --eEEEEECCCCC-CcceEEEeecCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECC
Q 002591 812 --SVRVWTVGSGS-EGECVHELSCNGNKFHSCVFHPTYPSLLVIGC-YQSLELWNMS 864 (903)
Q Consensus 812 --~I~iwdl~s~~-~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~-dg~I~vwdl~ 864 (903)
.|.+|++.... ..+.+..... ......+.++|+|++|+++.. +++|.+|+++
T Consensus 249 ~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 249 ASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred CCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 89999996543 2223333332 234567899999999998876 7899999874
No 173
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.75 E-value=1.9e-16 Score=166.51 Aligned_cols=210 Identities=16% Similarity=0.289 Sum_probs=172.9
Q ss_pred eEEeccCCCCeEEEEECCC-CCEEEEEeCCCcEEEEeCCCCC------ceeEEeccCCCceEEEEecCCCCeEEEEEeCC
Q 002591 658 KTNLEEHSSLITDVRFSPS-MPRLATSSFDKTVRVWDADNPG------YSLRTFMGHSASVMSLDFHPNKDDLICSCDGD 730 (903)
Q Consensus 658 ~~~l~~h~~~V~~l~fspd-g~~Lasgs~Dg~I~IWDl~~~~------~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D 730 (903)
.-.+.+|+++|.+++|+|- ...||+||.|.+|.||.+-..+ ..+..+.+|...|--+.|||.-.++|++++.|
T Consensus 74 ~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D 153 (472)
T KOG0303|consen 74 YPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD 153 (472)
T ss_pred CCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC
Confidence 3446799999999999995 4578999999999999986533 45778899999999999999999999999999
Q ss_pred CcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCC-eEEEEEcCCCCEEEE
Q 002591 731 GEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKP-IDSVCWDPSGELLAS 807 (903)
Q Consensus 731 g~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~-V~sl~~spdg~~las 807 (903)
.+|.+||+.+++.+-.+. .-+.+++|+.+|..+++++.|..|+|||.++++.+..-.+|.+. -..+.|-.+|.++.+
T Consensus 154 n~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tT 233 (472)
T KOG0303|consen 154 NTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTT 233 (472)
T ss_pred ceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeee
Confidence 999999999999766654 44678999999999999999999999999999999988888763 345668888886666
Q ss_pred EeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEE-CCCeEEEEECCCCcE
Q 002591 808 VSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIG-CYQSLELWNMSENKT 868 (903)
Q Consensus 808 gs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s-~dg~I~vwdl~~~~~ 868 (903)
|... .+-+||..+.++.-.+.++.. .+.|.---|.++...++.++ .|+.|+.|.+.....
T Consensus 234 Gfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 234 GFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPP 298 (472)
T ss_pred ccccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCCc
Confidence 6433 699999988877666666655 55566666888888776555 688999999987763
No 174
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.74 E-value=6.3e-17 Score=166.61 Aligned_cols=240 Identities=20% Similarity=0.335 Sum_probs=182.0
Q ss_pred cCCCCeEEEEEcCC----CCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCC
Q 002591 621 ASTSKVICCHFSSD----GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM-PRLATSSFDKTVRVWDAD 695 (903)
Q Consensus 621 ~H~~~V~~l~fspd----g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg-~~Lasgs~Dg~I~IWDl~ 695 (903)
.|....+.++|+-| ..+||+|+.-|.|+|.|+.++++...+.+|...|+.|.|.|+. .+|+++|.|..||+|++.
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 46777888888754 3489999999999999999999999999999999999999986 488999999999999999
Q ss_pred CCCceeEEec---cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE------e---------ec--------
Q 002591 696 NPGYSLRTFM---GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV------F---------KG-------- 749 (903)
Q Consensus 696 ~~~~~~~~~~---~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~------~---------~~-------- 749 (903)
+ ..++..|- +|.+.|.+++|+.++. .|++|+.|..|++|++...+.... + ..
T Consensus 167 ~-~~Cv~VfGG~egHrdeVLSvD~~~~gd-~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~f 244 (385)
T KOG1034|consen 167 T-DVCVAVFGGVEGHRDEVLSVDFSLDGD-RIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDF 244 (385)
T ss_pred C-CeEEEEecccccccCcEEEEEEcCCCC-eeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccc
Confidence 8 77777664 6999999999999988 556999999999999984331111 1 00
Q ss_pred --------CceeEEEecCCCEEEEEEcCCeEEEEEC-CCCe-------------EEEEecCCCCCeEEE--EEcCCCCEE
Q 002591 750 --------GTAQMRFQPHLGRYLAAAAENVVSILDA-ETQA-------------CRLSLQGHTKPIDSV--CWDPSGELL 805 (903)
Q Consensus 750 --------~~~~v~~sp~~~~ll~~s~dg~I~i~D~-~t~~-------------~~~~l~~h~~~V~sl--~~spdg~~l 805 (903)
.+.+++| -++++++-+.++.|..|.. +-.+ .+.++.-....|.-| +|++-.++|
T Consensus 245 st~diHrnyVDCvrw--~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~l 322 (385)
T KOG1034|consen 245 STTDIHRNYVDCVRW--FGDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKML 322 (385)
T ss_pred cccccccchHHHHHH--HhhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHH
Confidence 0111111 1367777788999999976 2111 222333333445554 456667899
Q ss_pred EEEeCC-eEEEEECCCCCCcceEEEe-ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 806 ASVSED-SVRVWTVGSGSEGECVHEL-SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 806 asgs~d-~I~iwdl~s~~~~~~i~~~-~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
|.|... .|++||++..+...+.... ......|...+|+.|+..|+..+.|++|.-||..
T Consensus 323 a~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 323 ALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred hhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 999888 9999999987664333222 2235678999999999999999999999999853
No 175
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.74 E-value=1.5e-15 Score=178.47 Aligned_cols=292 Identities=18% Similarity=0.223 Sum_probs=209.1
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCC-------CceeEEeccCCCCeEEEEECCCCCEEEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDG-KLLATGGHDKKAVLWHTDT-------LKSKTNLEEHSSLITDVRFSPSMPRLATS 683 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg-~~Latgs~Dg~V~vWd~~t-------~~~~~~l~~h~~~V~~l~fspdg~~Lasg 683 (903)
....+..+..|...|..++.++.. .++++|+.||+|+|||+.+ .+...++......+.++.+.+.+..+|++
T Consensus 1037 ~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~ 1116 (1431)
T KOG1240|consen 1037 RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVS 1116 (1431)
T ss_pred cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEE
Confidence 556788899999999999988755 8999999999999999763 12334444567889999999999999999
Q ss_pred eCCCcEEEEeCCCCC------ceeEEeccC-CCc-eEEEEecCCCC-eEEEEEeCCCcEEEEEcCCCeeeEEee-----c
Q 002591 684 SFDKTVRVWDADNPG------YSLRTFMGH-SAS-VMSLDFHPNKD-DLICSCDGDGEIRYWSINNGSCTRVFK-----G 749 (903)
Q Consensus 684 s~Dg~I~IWDl~~~~------~~~~~~~~h-~~~-V~sl~fsp~~~-~ll~sgs~Dg~I~iwDi~t~~~~~~~~-----~ 749 (903)
+.||.|++.+++... ...+....+ .+. |..-+|..... .+++.+...+.|..||+++.......+ +
T Consensus 1117 t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG 1196 (1431)
T KOG1240|consen 1117 TKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHG 1196 (1431)
T ss_pred cCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccc
Confidence 999999999997511 111222222 223 33334433333 366677788999999999876554433 4
Q ss_pred CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEec-CCCCCeEEEEEcCCC---CEEEEEeC-C--eEEEEECCCCC
Q 002591 750 GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQ-GHTKPIDSVCWDPSG---ELLASVSE-D--SVRVWTVGSGS 822 (903)
Q Consensus 750 ~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~-~h~~~V~sl~~spdg---~~lasgs~-d--~I~iwdl~s~~ 822 (903)
-+++++.+|.+.+++.|...|.+.+||++-+.++..+. .+..+|+.++.+|-. .+.++++. . .|.+|++.++.
T Consensus 1197 ~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~ 1276 (1431)
T KOG1240|consen 1197 LVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGL 1276 (1431)
T ss_pred ceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCc
Confidence 67889999999999999999999999999988887765 355778888877733 35555544 3 89999999873
Q ss_pred CcceEEEe----------e------cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-----------------
Q 002591 823 EGECVHEL----------S------CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM----------------- 869 (903)
Q Consensus 823 ~~~~i~~~----------~------~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~----------------- 869 (903)
....+..- . .+......+.+...+..+++|+.|..|+.||....+..
T Consensus 1277 ~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s 1356 (1431)
T KOG1240|consen 1277 RQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSES 1356 (1431)
T ss_pred ceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchh
Confidence 32222111 0 11112344556667788999999999999998542111
Q ss_pred ----------------------------------------EEccCCCCEEEEEEecC-CCEEEEEecCCcEEEcC
Q 002591 870 ----------------------------------------TLTAHEGLIAALAVSTE-TGYVASASHDKFVKLWK 903 (903)
Q Consensus 870 ----------------------------------------~~~~h~~~V~sl~~spd-g~~LaSgs~DG~I~IWd 903 (903)
.-..|.+.|+++++... -.+|++++.||.|+||+
T Consensus 1357 ~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1357 YDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred ccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 00117778888877543 45899999999999996
No 176
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=7.5e-16 Score=157.54 Aligned_cols=238 Identities=23% Similarity=0.359 Sum_probs=169.7
Q ss_pred ceeeeeEeecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECC---------CCceeEEeccCCCCeEEEEECCC--CC
Q 002591 612 SFKEANSVRASTSKVICCHFSS--DGKLLATGGHDKKAVLWHTD---------TLKSKTNLEEHSSLITDVRFSPS--MP 678 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fsp--dg~~Latgs~Dg~V~vWd~~---------t~~~~~~l~~h~~~V~~l~fspd--g~ 678 (903)
+|......+.|.+.|..|.|.+ -|..+|+++.|++|.||.-. ......++......|++|.|.|. |-
T Consensus 48 ~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGL 127 (361)
T KOG2445|consen 48 TWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGL 127 (361)
T ss_pred ceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcce
Confidence 7888899999999999999965 68999999999999999741 12345566778889999999986 66
Q ss_pred EEEEEeCCCcEEEEeCCCCCcee-----E-------EeccCCCceEEEEecCCC--CeEEEEEeCC-----CcEEEEEcC
Q 002591 679 RLATSSFDKTVRVWDADNPGYSL-----R-------TFMGHSASVMSLDFHPNK--DDLICSCDGD-----GEIRYWSIN 739 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~-----~-------~~~~h~~~V~sl~fsp~~--~~ll~sgs~D-----g~I~iwDi~ 739 (903)
.||+++.||+||||+.-+..... . ....+.....|+.|++.. ..+|+.|+.+ +.++||...
T Consensus 128 klA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~ 207 (361)
T KOG2445|consen 128 KLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYN 207 (361)
T ss_pred EEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEec
Confidence 89999999999999987633211 1 111355566777777541 2255555533 234444332
Q ss_pred CCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC----CCEEEEEeCCeEEE
Q 002591 740 NGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPS----GELLASVSEDSVRV 815 (903)
Q Consensus 740 t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd----g~~lasgs~d~I~i 815 (903)
.. .+....+.++.+|..+|+.|+|.|+ ..+||+++.|.|+|
T Consensus 208 e~-----------------------------------~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDgv~I 252 (361)
T KOG2445|consen 208 EN-----------------------------------GRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDGVRI 252 (361)
T ss_pred CC-----------------------------------cceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCcEEE
Confidence 21 1112344566789999999999995 34788888888999
Q ss_pred EECCCC-----------------CCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC---CcEEEEccCC
Q 002591 816 WTVGSG-----------------SEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSE---NKTMTLTAHE 875 (903)
Q Consensus 816 wdl~s~-----------------~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~---~~~~~~~~h~ 875 (903)
|.++.. -....+..+..|.+.|..+.|+-.|..|++.+.||.|++|...- .++.....-+
T Consensus 253 ~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~~e 332 (361)
T KOG2445|consen 253 FKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLKAE 332 (361)
T ss_pred EEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeEEecc
Confidence 999741 12345667888999999999999999999999999999997643 2344333334
Q ss_pred CCEEEEEEe
Q 002591 876 GLIAALAVS 884 (903)
Q Consensus 876 ~~V~sl~~s 884 (903)
+.|....|.
T Consensus 333 ~~~~~~~~~ 341 (361)
T KOG2445|consen 333 GSVTKPDFS 341 (361)
T ss_pred CCCCCcccc
Confidence 444444443
No 177
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=2.2e-17 Score=180.82 Aligned_cols=243 Identities=21% Similarity=0.285 Sum_probs=177.9
Q ss_pred EEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC-------CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCC
Q 002591 659 TNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN-------PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 731 (903)
Q Consensus 659 ~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~-------~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg 731 (903)
.++..|.+.|+.+.|.+....|++++.||+|.+|++.. .-+.+.+|.+|.++|.|+++.+++..++ +|+.||
T Consensus 288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~y-sgg~Dg 366 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCY-SGGIDG 366 (577)
T ss_pred eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEE-eeccCc
Confidence 37778999999999999999999999999999999932 1246789999999999999999987655 999999
Q ss_pred cEEEEEcCCC----------eeeEEeecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCC--CCCeEEE
Q 002591 732 EIRYWSINNG----------SCTRVFKGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGH--TKPIDSV 796 (903)
Q Consensus 732 ~I~iwDi~t~----------~~~~~~~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h--~~~V~sl 796 (903)
+|+.|++... .....+.++ +..+.++....+|+.++.||+|++|+.....+ .++... .+.-.++
T Consensus 367 ~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsv 445 (577)
T KOG0642|consen 367 TIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSV 445 (577)
T ss_pred eeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceE
Confidence 9999966421 112233333 44577888889999999999999999877655 333221 1223344
Q ss_pred EEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEee----cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-
Q 002591 797 CWDPSGELLASVSED--SVRVWTVGSGSEGECVHELS----CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM- 869 (903)
Q Consensus 797 ~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~~----~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~- 869 (903)
.|......+..++.. .-.++++........+.... .....+..+.++|.....+++..|+.|+++|..+++++
T Consensus 446 d~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~ 525 (577)
T KOG0642|consen 446 DRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILH 525 (577)
T ss_pred eeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccccccch
Confidence 444322111111111 22233333221111111110 11245778899999999999999999999999999988
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 870 TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 870 ~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
...+|...|+++++.|+|.+|+++++||.|++|+
T Consensus 526 s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~k 559 (577)
T KOG0642|consen 526 SMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWK 559 (577)
T ss_pred heeeccceecceeecCCCceEEeecCCceeehhh
Confidence 8889999999999999999999999999999996
No 178
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.72 E-value=5.1e-16 Score=157.48 Aligned_cols=238 Identities=20% Similarity=0.377 Sum_probs=177.8
Q ss_pred cCCCCeEEEEEcCCCC-----EEEEEeCCCcEEEEECCCCceeEE---------eccCCCCeEEEEECC-CCCEEEEEeC
Q 002591 621 ASTSKVICCHFSSDGK-----LLATGGHDKKAVLWHTDTLKSKTN---------LEEHSSLITDVRFSP-SMPRLATSSF 685 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~-----~Latgs~Dg~V~vWd~~t~~~~~~---------l~~h~~~V~~l~fsp-dg~~Lasgs~ 685 (903)
.|.-+++.+-|.|+.+ +|||++ ..+|||.+...+.... -..+..++++..|+. +-++|.+++-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 5889999999999763 666654 4799999874222111 124678899999986 4568899999
Q ss_pred CCcEEEEeCCCC--CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE-Eeec-----CceeEEEe
Q 002591 686 DKTVRVWDADNP--GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR-VFKG-----GTAQMRFQ 757 (903)
Q Consensus 686 Dg~I~IWDl~~~--~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~-~~~~-----~~~~v~~s 757 (903)
|-+..|||++++ +.....+..|...|+.|+|...+..+|++++.||.||+||++..+... .++. ....++|+
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswn 251 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWN 251 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccC
Confidence 999999999983 334667788999999999999889999999999999999999876433 3333 23457777
Q ss_pred cCCCEEEE-EEc-CCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCC---cceEEE
Q 002591 758 PHLGRYLA-AAA-ENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSE---GECVHE 829 (903)
Q Consensus 758 p~~~~ll~-~s~-dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~---~~~i~~ 829 (903)
+.+..+++ ... ...|.|.|++.. .++..+.+|...|+.|+|.|... .|+++++| .+.|||+..... ...+..
T Consensus 252 kqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPila 331 (364)
T KOG0290|consen 252 KQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILA 331 (364)
T ss_pred cCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhh
Confidence 77755444 333 458999999986 68889999999999999999654 89999999 899999976432 112222
Q ss_pred eecCCCceEEEEEeCCCCEEEEEECCCeEEEE
Q 002591 830 LSCNGNKFHSCVFHPTYPSLLVIGCYQSLELW 861 (903)
Q Consensus 830 ~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vw 861 (903)
+. .+..|..+.|++...--++++.++++.+.
T Consensus 332 y~-a~~EVNqi~Ws~~~~Dwiai~~~kkleiL 362 (364)
T KOG0290|consen 332 YT-AGGEVNQIQWSSSQPDWIAICFGKKLEIL 362 (364)
T ss_pred hh-ccceeeeeeecccCCCEEEEEecCeeeEE
Confidence 22 36789999999755444445555555543
No 179
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.72 E-value=7.8e-16 Score=158.16 Aligned_cols=231 Identities=19% Similarity=0.310 Sum_probs=180.6
Q ss_pred CCCeEEEEEc-------CCCCEEEEEeCCCcEEEEECCCCceeEEecc--CCC---CeEEEEECCCCCEEEEEeCCCcEE
Q 002591 623 TSKVICCHFS-------SDGKLLATGGHDKKAVLWHTDTLKSKTNLEE--HSS---LITDVRFSPSMPRLATSSFDKTVR 690 (903)
Q Consensus 623 ~~~V~~l~fs-------pdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~--h~~---~V~~l~fspdg~~Lasgs~Dg~I~ 690 (903)
...|+..+|- |+..++|+.+.|.-|++||.-+|+....++. |-+ ...+++|+|||..|++|- ...|+
T Consensus 104 g~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcir 182 (406)
T KOG2919|consen 104 GETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIR 182 (406)
T ss_pred CCEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEE
Confidence 3467777775 5777999999999999999999998888774 333 456899999999998775 67799
Q ss_pred EEeCCCCCceeEE--ec-----cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe---ecCceeEEEecCC
Q 002591 691 VWDADNPGYSLRT--FM-----GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF---KGGTAQMRFQPHL 760 (903)
Q Consensus 691 IWDl~~~~~~~~~--~~-----~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~---~~~~~~v~~sp~~ 760 (903)
|||+..++..... .. +..+.|.|++|+|....+++.++....+-||.-.....+..+ .++++.++|.++|
T Consensus 183 vFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edG 262 (406)
T KOG2919|consen 183 VFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDG 262 (406)
T ss_pred EeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCc
Confidence 9999655543221 11 236789999999998888889999999989888777766554 4679999999999
Q ss_pred CEEEEEEc-CCeEEEEECCCC-eEEEEecCCCC-CeEE--EEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCC
Q 002591 761 GRYLAAAA-ENVVSILDAETQ-ACRLSLQGHTK-PIDS--VCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNG 834 (903)
Q Consensus 761 ~~ll~~s~-dg~I~i~D~~t~-~~~~~l~~h~~-~V~s--l~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~ 834 (903)
++|++++. +..|..||++.. .++..+..|.. .-.. ....|++++|++|+.+ .|++||+.... ..+..+..+.
T Consensus 263 n~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~g--n~~sv~~~~s 340 (406)
T KOG2919|consen 263 NKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLG--NEVSVTGNYS 340 (406)
T ss_pred CeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCC--Cccccccccc
Confidence 99999987 789999999975 56677777765 2223 3456889999999888 99999998732 3455666677
Q ss_pred CceEEEEEeCCCCEEEEEECCC
Q 002591 835 NKFHSCVFHPTYPSLLVIGCYQ 856 (903)
Q Consensus 835 ~~i~si~~sp~g~~l~t~s~dg 856 (903)
..++.++++|--..+++++...
T Consensus 341 d~vNgvslnP~mpilatssGqr 362 (406)
T KOG2919|consen 341 DTVNGVSLNPIMPILATSSGQR 362 (406)
T ss_pred ccccceecCcccceeeeccCce
Confidence 8899999999977777766543
No 180
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.71 E-value=3.7e-16 Score=164.32 Aligned_cols=201 Identities=19% Similarity=0.301 Sum_probs=160.0
Q ss_pred eeEeecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCC-------ceeEEeccCCCCeEEEEECCCC-CEEEEEeCC
Q 002591 616 ANSVRASTSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTL-------KSKTNLEEHSSLITDVRFSPSM-PRLATSSFD 686 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspd-g~~Latgs~Dg~V~vWd~~t~-------~~~~~l~~h~~~V~~l~fspdg-~~Lasgs~D 686 (903)
+-.+.+|+++|..++|+|- ...||+|+.|.+|.||++... +.+..+.+|...|--|.|+|.. +.|++++.|
T Consensus 74 ~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D 153 (472)
T KOG0303|consen 74 YPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD 153 (472)
T ss_pred CCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC
Confidence 3457899999999999994 568999999999999997632 4577889999999999999975 478999999
Q ss_pred CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC----ceeEEEecCCCE
Q 002591 687 KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG----TAQMRFQPHLGR 762 (903)
Q Consensus 687 g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~----~~~v~~sp~~~~ 762 (903)
.+|.||++.+ ++.+.++. |.+.|++++|+.+|. ++++.+.|..|||||.++++.+..-..+ ...+.|..++.
T Consensus 154 n~v~iWnv~t-geali~l~-hpd~i~S~sfn~dGs-~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~- 229 (472)
T KOG0303|consen 154 NTVSIWNVGT-GEALITLD-HPDMVYSMSFNRDGS-LLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGK- 229 (472)
T ss_pred ceEEEEeccC-CceeeecC-CCCeEEEEEeccCCc-eeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCc-
Confidence 9999999998 66666666 999999999999977 6679999999999999999988765432 33466777777
Q ss_pred EEEEEc----CCeEEEEECCCCeE---EEEecCCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCC
Q 002591 763 YLAAAA----ENVVSILDAETQAC---RLSLQGHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSG 821 (903)
Q Consensus 763 ll~~s~----dg~I~i~D~~t~~~---~~~l~~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~ 821 (903)
+++++. +..+.+||....+. ..++. ....|.---|++|..+|+.++.+ .||.|.+...
T Consensus 230 i~tTGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 230 IFTTGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred eeeeccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecCC
Confidence 555443 67899998776532 22333 34556666788988877776655 8999999765
No 181
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=3.2e-15 Score=148.19 Aligned_cols=267 Identities=16% Similarity=0.225 Sum_probs=192.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCC----------CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDT----------LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t----------~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
.|.+-+|+|.+++|++|..+|.|.++.+++ ...+..+.+|.++|..++|. ..+|++|+ ||.|+-|..
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~W 88 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWEW 88 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEeee
Confidence 577778999999999999999999998753 13345567999999999998 34677766 699999987
Q ss_pred CCCCcee-----E--EeccC-----CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCcee---EEEecC
Q 002591 695 DNPGYSL-----R--TFMGH-----SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQ---MRFQPH 759 (903)
Q Consensus 695 ~~~~~~~-----~--~~~~h-----~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~---v~~sp~ 759 (903)
+...+.. . ...-| --.|+++...|..+.+|. ++.|+.++.||+++|+..++++++... +.....
T Consensus 89 ~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~-AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~ 167 (325)
T KOG0649|consen 89 NEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILF-AGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNA 167 (325)
T ss_pred hhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEE-ecCCeEEEEEEecCCEEEEEEcCCcceeeeeeeccc
Confidence 6422210 0 01112 235888999998887774 447999999999999999999987654 444456
Q ss_pred CCEEEEEEcCCeEEEEECCCCeEEEEecCCC----------CCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEE
Q 002591 760 LGRYLAAAAENVVSILDAETQACRLSLQGHT----------KPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHE 829 (903)
Q Consensus 760 ~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~----------~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~ 829 (903)
.+.+++++.||++++||.++++++..+...+ .+|-+++. +..++++|+.-.+.+|.+++.+. .++..
T Consensus 168 ~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGgGp~lslwhLrsse~-t~vfp 244 (325)
T KOG0649|consen 168 NGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGGGPKLSLWHLRSSES-TCVFP 244 (325)
T ss_pred CcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecCCCceeEEeccCCCc-eEEEe
Confidence 6899999999999999999999988775421 23555554 46788888777999999998632 33333
Q ss_pred eecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecC-CCEEEEEecCCcEEEcC
Q 002591 830 LSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTE-TGYVASASHDKFVKLWK 903 (903)
Q Consensus 830 ~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spd-g~~LaSgs~DG~I~IWd 903 (903)
+ ...+..+.|..+ .+++++..+.|.-|.+..--...+.......++..|+.. -++|-.++..+.+.|++
T Consensus 245 i---pa~v~~v~F~~d--~vl~~G~g~~v~~~~l~Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 245 I---PARVHLVDFVDD--CVLIGGEGNHVQSYTLNGVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred c---ccceeEeeeecc--eEEEeccccceeeeeeccEEEEeccCCccceeeecccCCceEEEEecccceeeeeee
Confidence 3 456777788654 577888788999998865443444444444555555432 34566677777777753
No 182
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.71 E-value=1.9e-15 Score=173.95 Aligned_cols=256 Identities=18% Similarity=0.287 Sum_probs=184.3
Q ss_pred CcEEEEECCCC-ceeEEeccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCce-----eEEeccCCCceEEEEec
Q 002591 645 KKAVLWHTDTL-KSKTNLEEHSSLITDVRFSPSMP-RLATSSFDKTVRVWDADNPGYS-----LRTFMGHSASVMSLDFH 717 (903)
Q Consensus 645 g~V~vWd~~t~-~~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I~IWDl~~~~~~-----~~~~~~h~~~V~sl~fs 717 (903)
+.+.||+++.. .....+ .....|+|++|+|... +||.|+.+|.|.+||++..... ......|..+|+.+.|.
T Consensus 222 ~~~~vW~~~~p~~Pe~~~-~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~ 300 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVL-ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL 300 (555)
T ss_pred ceEEEEecCCCCCceEEE-ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence 47999999865 333333 4567799999999654 6778888999999999875442 12334689999999997
Q ss_pred CCCCe-EEEEEeCCCcEEEEEcCCCeee------EEe---------ecCceeEEEecCC-CEEEEEEcCCeEEEEECCC-
Q 002591 718 PNKDD-LICSCDGDGEIRYWSINNGSCT------RVF---------KGGTAQMRFQPHL-GRYLAAAAENVVSILDAET- 779 (903)
Q Consensus 718 p~~~~-ll~sgs~Dg~I~iwDi~t~~~~------~~~---------~~~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t- 779 (903)
.+... =|++++.||.|+.|+++.-... ... ...+..+.|.+.. ..|++|+.+|.|..-+...
T Consensus 301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~ 380 (555)
T KOG1587|consen 301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY 380 (555)
T ss_pred ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence 65433 2348888999999998754321 111 1245667787766 5788888899888743322
Q ss_pred --C-----eEEEEecCCCCCeEEEEEcCCCC-EEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCE-EE
Q 002591 780 --Q-----ACRLSLQGHTKPIDSVCWDPSGE-LLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPS-LL 850 (903)
Q Consensus 780 --~-----~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~-l~ 850 (903)
. +....+..|.++|+++.++|-+. +|.++++.+|+||..... ...+..+..+...+++++|+|.... |+
T Consensus 381 ~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~--~~Pl~~~~~~~~~v~~vaWSptrpavF~ 458 (555)
T KOG1587|consen 381 TPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVI--ASPLLSLDSSPDYVTDVAWSPTRPAVFA 458 (555)
T ss_pred cccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCC--CCcchhhhhccceeeeeEEcCcCceEEE
Confidence 2 12334566899999999999776 455555339999998632 2455556666677999999998765 45
Q ss_pred EEECCCeEEEEECCCCcEE---EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 851 VIGCYQSLELWNMSENKTM---TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 851 t~s~dg~I~vwdl~~~~~~---~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
++..||.|.|||+...... ....+....+.+.|+++|++|+.|...|.|+||+
T Consensus 459 ~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~ 514 (555)
T KOG1587|consen 459 TVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILK 514 (555)
T ss_pred EEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEE
Confidence 5566899999999765433 4444566777888888999999999999999985
No 183
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.70 E-value=1.4e-15 Score=150.80 Aligned_cols=227 Identities=19% Similarity=0.267 Sum_probs=171.3
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCC---------CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEE
Q 002591 667 LITDVRFSPSMPRLATSSFDKTVRVWDADN---------PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 737 (903)
Q Consensus 667 ~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~---------~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwD 737 (903)
.|.+-+|+|.+++|++|+.+|.|.++.+.+ +...+..+.+|.++|+.++|+. .+|++|+ ||.|+-|.
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d---~~Lls~g-dG~V~gw~ 87 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD---DFLLSGG-DGLVYGWE 87 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh---hheeecc-CceEEEee
Confidence 466778999999999999999999998863 2234566689999999999983 2555776 69999998
Q ss_pred cCCCee----eEEe------------ecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC
Q 002591 738 INNGSC----TRVF------------KGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPS 801 (903)
Q Consensus 738 i~t~~~----~~~~------------~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd 801 (903)
.+.... .+.+ -..++.+-..|..+.++.++.|+.++.||+++|+..+++++|++.|.++.--..
T Consensus 88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~ 167 (325)
T KOG0649|consen 88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNA 167 (325)
T ss_pred ehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeeccc
Confidence 764321 1111 124677888999999999999999999999999999999999999999998665
Q ss_pred CCEEEEEeCC-eEEEEECCCCCCcceEEEeec-------CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEcc
Q 002591 802 GELLASVSED-SVRVWTVGSGSEGECVHELSC-------NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTA 873 (903)
Q Consensus 802 g~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~-------~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~ 873 (903)
..-|++|++| ++||||+++.+....+...+. ....|.+++.+. .+++ |+....+.+|+++..+...+..
T Consensus 168 ~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~e--dWlv-CGgGp~lslwhLrsse~t~vfp 244 (325)
T KOG0649|consen 168 NGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNE--DWLV-CGGGPKLSLWHLRSSESTCVFP 244 (325)
T ss_pred CcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccC--ceEE-ecCCCceeEEeccCCCceEEEe
Confidence 6678889998 999999999855444433322 122355555543 3444 4555689999999999988777
Q ss_pred CCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 874 HEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 874 h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
-...|..+.|..| .+++++..+.|.-|
T Consensus 245 ipa~v~~v~F~~d--~vl~~G~g~~v~~~ 271 (325)
T KOG0649|consen 245 IPARVHLVDFVDD--CVLIGGEGNHVQSY 271 (325)
T ss_pred cccceeEeeeecc--eEEEeccccceeee
Confidence 8888999998654 56666655555444
No 184
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.70 E-value=1.3e-14 Score=152.06 Aligned_cols=231 Identities=17% Similarity=0.290 Sum_probs=173.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC--CcEEEEeCCCCCce
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD--KTVRVWDADNPGYS 700 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D--g~I~IWDl~~~~~~ 700 (903)
...|..+.|..|...|..|+.|| .++|..+..............|..+-|+.. ++|..+.+ ..+++++++. +..
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk-~~~ 80 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKK-KTT 80 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEccc-Cce
Confidence 45678888999999999999987 688887765543333334445666667654 66555554 4589999986 333
Q ss_pred eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC----ceeEEEecCC--CEEEEEEc--CCeE
Q 002591 701 LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG----TAQMRFQPHL--GRYLAAAA--ENVV 772 (903)
Q Consensus 701 ~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~----~~~v~~sp~~--~~ll~~s~--dg~I 772 (903)
+..+. ....|.++.++.+ +++ ++-. ..|+|||+++.+.++++..- ...++++++. .+++.-+. .|.|
T Consensus 81 ICe~~-fpt~IL~VrmNr~--RLv-V~Le-e~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV 155 (391)
T KOG2110|consen 81 ICEIF-FPTSILAVRMNRK--RLV-VCLE-ESIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDV 155 (391)
T ss_pred EEEEe-cCCceEEEEEccc--eEE-EEEc-ccEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceE
Confidence 43333 4567999999754 344 5554 44999999999988877532 2234555554 46655433 5899
Q ss_pred EEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEeecC--CCceEEEEEeCCCCE
Q 002591 773 SILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGECVHELSCN--GNKFHSCVFHPTYPS 848 (903)
Q Consensus 773 ~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~~~~--~~~i~si~~sp~g~~ 848 (903)
.+||+.+-+.+..+..|++.+.+++|+++|.+||++++. -||||.+.++ ..+.++... ...|.+++|++++.+
T Consensus 156 ~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G---~kl~eFRRG~~~~~IySL~Fs~ds~~ 232 (391)
T KOG2110|consen 156 VLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEG---QKLYEFRRGTYPVSIYSLSFSPDSQF 232 (391)
T ss_pred EEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCc---cEeeeeeCCceeeEEEEEEECCCCCe
Confidence 999999999999999999999999999999999999998 6899999887 444444432 345889999999999
Q ss_pred EEEEECCCeEEEEECCC
Q 002591 849 LLVIGCYQSLELWNMSE 865 (903)
Q Consensus 849 l~t~s~dg~I~vwdl~~ 865 (903)
|++.+..++|+||.+..
T Consensus 233 L~~sS~TeTVHiFKL~~ 249 (391)
T KOG2110|consen 233 LAASSNTETVHIFKLEK 249 (391)
T ss_pred EEEecCCCeEEEEEecc
Confidence 99999999999998864
No 185
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=5e-15 Score=170.32 Aligned_cols=279 Identities=17% Similarity=0.290 Sum_probs=209.8
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC----CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD----TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~----t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
.|.-.++|.++||+++++|+|..||.|.||.-- .......++-|...|++++|+++|.+|++|+..|-+.+|.+.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 477779999999999999999999999999632 2234566778999999999999999999999999999999998
Q ss_pred CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--------------cCceeEEEecCCCE
Q 002591 697 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--------------GGTAQMRFQPHLGR 762 (903)
Q Consensus 697 ~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--------------~~~~~v~~sp~~~~ 762 (903)
++ ...+..-.+.|..+.++|+++.+. .+..|..|.+....+.....++. +-...++++|.-+.
T Consensus 283 ~~--kqfLPRLgs~I~~i~vS~ds~~~s-l~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~ 359 (792)
T KOG1963|consen 283 GK--KQFLPRLGSPILHIVVSPDSDLYS-LVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNS 359 (792)
T ss_pred CC--cccccccCCeeEEEEEcCCCCeEE-EEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCc
Confidence 44 455666788999999999987555 66669999998875544333222 22455788998889
Q ss_pred EEEEEcCCeEEEEECCCCeEEEEecC-----C------CCCeEEEEEcCCCCEEEEEeC----------C-eEEEEECCC
Q 002591 763 YLAAAAENVVSILDAETQACRLSLQG-----H------TKPIDSVCWDPSGELLASVSE----------D-SVRVWTVGS 820 (903)
Q Consensus 763 ll~~s~dg~I~i~D~~t~~~~~~l~~-----h------~~~V~sl~~spdg~~lasgs~----------d-~I~iwdl~s 820 (903)
++..+..+.|.+||+-+.+.++.+.. + ...++.++.+-.|.+++|... . .+++|-...
T Consensus 360 ~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~ 439 (792)
T KOG1963|consen 360 LVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNP 439 (792)
T ss_pred eeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcC
Confidence 99999999999999998876665531 1 234677788888999988741 1 589998765
Q ss_pred CCCcceE--EEeecCCCceEEEEEe-CCCC-EEEEEECCCeEEEEECCCCc----------EE-EEccCCCCEEEEEEec
Q 002591 821 GSEGECV--HELSCNGNKFHSCVFH-PTYP-SLLVIGCYQSLELWNMSENK----------TM-TLTAHEGLIAALAVST 885 (903)
Q Consensus 821 ~~~~~~i--~~~~~~~~~i~si~~s-p~g~-~l~t~s~dg~I~vwdl~~~~----------~~-~~~~h~~~V~sl~~sp 885 (903)
......+ .....|+..+...++. +... .+++++.||.++||-+...+ +. .-.-|..++++++|+.
T Consensus 440 ~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~ 519 (792)
T KOG1963|consen 440 NSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQ 519 (792)
T ss_pred CcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCcccchhhcC
Confidence 5433322 2334566665555544 3333 79999999999999883322 11 1123788999999999
Q ss_pred CCCEEEEEecCCcEEEcC
Q 002591 886 ETGYVASASHDKFVKLWK 903 (903)
Q Consensus 886 dg~~LaSgs~DG~I~IWd 903 (903)
||..| +++.|++|.|||
T Consensus 520 dGsll-a~s~~~~Itiwd 536 (792)
T KOG1963|consen 520 DGSLL-AVSFDDTITIWD 536 (792)
T ss_pred CCcEE-EEecCCEEEEec
Confidence 99655 556789999997
No 186
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.69 E-value=1.9e-15 Score=174.09 Aligned_cols=244 Identities=19% Similarity=0.279 Sum_probs=185.3
Q ss_pred CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCce--eEE----eccCCCCeEEEEECCCCC--EEEEEeCCCcEEEE
Q 002591 622 STSKVICCHFSSD-GKLLATGGHDKKAVLWHTDTLKS--KTN----LEEHSSLITDVRFSPSMP--RLATSSFDKTVRVW 692 (903)
Q Consensus 622 H~~~V~~l~fspd-g~~Latgs~Dg~V~vWd~~t~~~--~~~----l~~h~~~V~~l~fspdg~--~Lasgs~Dg~I~IW 692 (903)
-...|+|++|+|. ..+||.|+++|.|.+||+..+.. ... ...|..+|+.+.|..+.. -|++++.||.|+.|
T Consensus 241 ~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 241 SPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred cCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 4568999999994 56888899999999999986554 222 236899999999976544 49999999999999
Q ss_pred eCCCCCceeE-----Eec------cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee--------e---EEeecC
Q 002591 693 DADNPGYSLR-----TFM------GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC--------T---RVFKGG 750 (903)
Q Consensus 693 Dl~~~~~~~~-----~~~------~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~--------~---~~~~~~ 750 (903)
+++.-..+.. ... .-...+++++|.+...+.++.|+++|.|..-+....+. . ..+.+.
T Consensus 321 ~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~ 400 (555)
T KOG1587|consen 321 DTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGP 400 (555)
T ss_pred eccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcc
Confidence 8875222111 111 22346899999999888888999999998743322211 1 112345
Q ss_pred ceeEEEecCCCEEEEEEcCCeEEEEECC-CCeEEEEecCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceE
Q 002591 751 TAQMRFQPHLGRYLAAAAENVVSILDAE-TQACRLSLQGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECV 827 (903)
Q Consensus 751 ~~~v~~sp~~~~ll~~s~dg~I~i~D~~-t~~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i 827 (903)
+..+.++|-...++.++.|.+|+||... ...++..+..+...|++++|+|... +|+++..+ .|.|||+....... +
T Consensus 401 v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~P-v 479 (555)
T KOG1587|consen 401 VYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEP-V 479 (555)
T ss_pred eEeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCC-c
Confidence 7778899999888888889999999988 7788888888888899999999776 66667666 99999998754433 3
Q ss_pred EEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC
Q 002591 828 HELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSEN 866 (903)
Q Consensus 828 ~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~ 866 (903)
.....+....+.+.|++.|+.|++|...|.|++|++...
T Consensus 480 ~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 480 LSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred ccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 333333566777788889999999999999999999643
No 187
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=1.7e-16 Score=172.35 Aligned_cols=237 Identities=20% Similarity=0.285 Sum_probs=167.5
Q ss_pred eeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEECCC--CCEEEEEeCCCcE
Q 002591 613 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRFSPS--MPRLATSSFDKTV 689 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~fspd--g~~Lasgs~Dg~I 689 (903)
+.....+.||++.|+|++|+.+|.+|++|+.|-.|.|||.-..+.+..+. +|...|.++.|-|. .+.+++|..|..|
T Consensus 40 L~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i 119 (758)
T KOG1310|consen 40 LDLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLI 119 (758)
T ss_pred cchhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceE
Confidence 34556789999999999999999999999999999999988777777764 89999999999884 5689999999999
Q ss_pred EEEeCCC---------CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-EEe------------
Q 002591 690 RVWDADN---------PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-RVF------------ 747 (903)
Q Consensus 690 ~IWDl~~---------~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-~~~------------ 747 (903)
++||+.. .....+.+..|...|..|+-.|++.+.+.++++||+|+-+|++..... ...
T Consensus 120 ~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~ 199 (758)
T KOG1310|consen 120 KLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQ 199 (758)
T ss_pred EEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchh
Confidence 9999984 234566777899999999999999899999999999999999874311 111
Q ss_pred ecCceeEEEecCCC-EEEEEEcCCeEEEEECCCCeEEEEecC-----CCCCeEEEE-EcCCCCEEEEEeCCeEEEEECCC
Q 002591 748 KGGTAQMRFQPHLG-RYLAAAAENVVSILDAETQACRLSLQG-----HTKPIDSVC-WDPSGELLASVSEDSVRVWTVGS 820 (903)
Q Consensus 748 ~~~~~~v~~sp~~~-~ll~~s~dg~I~i~D~~t~~~~~~l~~-----h~~~V~sl~-~spdg~~lasgs~d~I~iwdl~s 820 (903)
.....++.++|... +|++|+.|-..++||.+...+-..-.+ ......|+. |+|.+- ...+
T Consensus 200 lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hl----kn~~--------- 266 (758)
T KOG1310|consen 200 LIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHL----KNSQ--------- 266 (758)
T ss_pred hheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccc----cCcc---------
Confidence 01345666777664 455566677788888543211110000 001111111 122110 0000
Q ss_pred CCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 821 GSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 821 ~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
+ . +......++-+.|+|+|..|++.-....|++||+..++..
T Consensus 267 g---n----~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~ 308 (758)
T KOG1310|consen 267 G---N----LDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSP 308 (758)
T ss_pred c---c----cccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCc
Confidence 0 0 0000112556789999999999888889999999988754
No 188
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.69 E-value=1.1e-15 Score=165.72 Aligned_cols=259 Identities=17% Similarity=0.279 Sum_probs=191.6
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEE-CC-------CCCEEEEEeCCCcEEEE
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF-SP-------SMPRLATSSFDKTVRVW 692 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~f-sp-------dg~~Lasgs~Dg~I~IW 692 (903)
.|...|.||.|+.+...+.+++ |..+.+|...+......+.-..+.|....+ -+ ....|+.++.||.+.|.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~d-Dh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSD-DHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEecc-CceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 4777788999998877666665 555555543333333333222222222221 11 23478888999999998
Q ss_pred eCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee---eEEeecCceeEEEecCCCEEEEEEcC
Q 002591 693 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC---TRVFKGGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 693 Dl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~---~~~~~~~~~~v~~sp~~~~ll~~s~d 769 (903)
+-. ++.-+.+..|.+.|.+-.|+|+|.-++ ++++||.|++|.-. |.. +..+...+.+++|.|+.+.++.+. .
T Consensus 91 ~k~--~rVE~sv~AH~~A~~~gRW~~dGtgLl-t~GEDG~iKiWSrs-GMLRStl~Q~~~~v~c~~W~p~S~~vl~c~-g 165 (737)
T KOG1524|consen 91 NKS--ARVERSISAHAAAISSGRWSPDGAGLL-TAGEDGVIKIWSRS-GMLRSTVVQNEESIRCARWAPNSNSIVFCQ-G 165 (737)
T ss_pred ccc--chhhhhhhhhhhhhhhcccCCCCceee-eecCCceEEEEecc-chHHHHHhhcCceeEEEEECCCCCceEEec-C
Confidence 754 566678889999999999999998776 99999999999843 432 233456789999999988877654 4
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCE
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~ 848 (903)
+.+.|--+.-...+...+.|.+-|.++.|++..+++++|++| ..+|||--. ..+..-..|+.+|++++|.|+ ..
T Consensus 166 ~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G----~~Lf~S~~~ey~ITSva~npd-~~ 240 (737)
T KOG1524|consen 166 GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG----ANLFTSAAEEYAITSVAFNPE-KD 240 (737)
T ss_pred CeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC----cccccCChhccceeeeeeccc-cc
Confidence 567777777777788889999999999999999999999999 999999643 566667778999999999999 44
Q ss_pred EEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 849 LLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 849 l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
+++++ .+++++= ....+.|..++|++||..++.|+..|.|.+
T Consensus 241 ~~v~S-~nt~R~~----------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 241 YLLWS-YNTARFS----------SPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred eeeee-eeeeeec----------CCCccceEEEEEcCCCceeeccccCceEEE
Confidence 44443 3444422 234577999999999999999999887643
No 189
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.69 E-value=1e-15 Score=158.65 Aligned_cols=252 Identities=16% Similarity=0.199 Sum_probs=184.8
Q ss_pred ceeeeeEeecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCceeEE--eccCC-CCeEEEEECCCCCEEEEEeC-
Q 002591 612 SFKEANSVRASTSKVICCHFSS--DGKLLATGGHDKKAVLWHTDTLKSKTN--LEEHS-SLITDVRFSPSMPRLATSSF- 685 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fsp--dg~~Latgs~Dg~V~vWd~~t~~~~~~--l~~h~-~~V~~l~fspdg~~Lasgs~- 685 (903)
+.+.+..|++|...++.++|.. ....+.+|+.||+|++||+++...... +..+. .+..|++..-.+..+++|..
T Consensus 59 tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~ 138 (376)
T KOG1188|consen 59 TGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTEL 138 (376)
T ss_pred chhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEecccc
Confidence 5567778889999999999977 456899999999999999986554443 44555 56778887777888888854
Q ss_pred ---CCcEEEEeCCCCCceeEE-eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe----eeEEee--cCceeEE
Q 002591 686 ---DKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS----CTRVFK--GGTAQMR 755 (903)
Q Consensus 686 ---Dg~I~IWDl~~~~~~~~~-~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~----~~~~~~--~~~~~v~ 755 (903)
|-.|.+||++.....++. ...|.+.|++|+|+|...++|++|+.||.|.|||++... ++.++. ..+..+.
T Consensus 139 ~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~ig 218 (376)
T KOG1188|consen 139 TRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIG 218 (376)
T ss_pred ccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeee
Confidence 678999999986664554 457999999999999999999999999999999998653 233333 2466778
Q ss_pred EecCC-CEEEEEEcCCeEEEEECCCCeEEEEecCCC------------CCeEEEEEcC-CCCEEEEEeCC--eEEEEECC
Q 002591 756 FQPHL-GRYLAAAAENVVSILDAETQACRLSLQGHT------------KPIDSVCWDP-SGELLASVSED--SVRVWTVG 819 (903)
Q Consensus 756 ~sp~~-~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~------------~~V~sl~~sp-dg~~lasgs~d--~I~iwdl~ 819 (903)
|..++ +++.+.+...+..+|+++.+.+...+.... ..+... .+| +..+++.++.+ ...++-+.
T Consensus 219 w~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~-~~~~~~~~~~l~g~~~n~~~~~~~~ 297 (376)
T KOG1188|consen 219 WLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINE-HSPGDKDTCALAGTDSNKGTIFPLV 297 (376)
T ss_pred eecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeec-ccCCCcceEEEeccccCceeEEEee
Confidence 87766 678888999999999999987665544221 011111 223 34455555443 55555443
Q ss_pred ---CCCCcceEEEeec-CCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 820 ---SGSEGECVHELSC-NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 820 ---s~~~~~~i~~~~~-~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
++.....+..+.+ |...|.++.|.-.+..+++|+.||.+.+|...
T Consensus 298 ~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 298 DTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred ecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 3433444455554 56678888999899999999999999999863
No 190
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.68 E-value=7.2e-15 Score=149.20 Aligned_cols=282 Identities=17% Similarity=0.263 Sum_probs=203.6
Q ss_pred eeeeEeecCCCCeEEEEEcC--C-CCEEEEEeC----CCcEEEEECC--CCceeEEe-ccCCCCeEEEEECCCCC-----
Q 002591 614 KEANSVRASTSKVICCHFSS--D-GKLLATGGH----DKKAVLWHTD--TLKSKTNL-EEHSSLITDVRFSPSMP----- 678 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fsp--d-g~~Latgs~----Dg~V~vWd~~--t~~~~~~l-~~h~~~V~~l~fspdg~----- 678 (903)
+++..+..+ -.++++.|+. + ..+||.|+. .++|.|..++ +++.+..- ..|..+++.+.|.|+..
T Consensus 36 ~eiy~Y~ap-~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pd 114 (364)
T KOG0290|consen 36 KEIYTYNAP-WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPD 114 (364)
T ss_pred ceEEEecCC-CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcc
Confidence 445555543 4688999983 3 348898873 4667776554 44433322 36899999999999864
Q ss_pred EEEEEeCCCcEEEEeCCCCCcee--------EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee--eE---
Q 002591 679 RLATSSFDKTVRVWDADNPGYSL--------RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC--TR--- 745 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~--------~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~--~~--- 745 (903)
+||+++ ..+|+|.+..+...+ ..-..+..+++++.|+.-..++|.+++-|-++.|||++++.. ++
T Consensus 115 lLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQL 192 (364)
T KOG0290|consen 115 LLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQL 192 (364)
T ss_pred hhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEE
Confidence 455543 459999987422111 112346789999999998888999999999999999998732 22
Q ss_pred -EeecCceeEEEecCC-CEEEEEEcCCeEEEEECCCCeEEEEe---cCCCCCeEEEEEcCC-CCEEEEEeCC--eEEEEE
Q 002591 746 -VFKGGTAQMRFQPHL-GRYLAAAAENVVSILDAETQACRLSL---QGHTKPIDSVCWDPS-GELLASVSED--SVRVWT 817 (903)
Q Consensus 746 -~~~~~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~~~~~l---~~h~~~V~sl~~spd-g~~lasgs~d--~I~iwd 817 (903)
.+...+..++|...+ +.|++++.||.|++||++..+--..+ .....+...++|++. -+|+|+...| .|.|.|
T Consensus 193 IAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLD 272 (364)
T KOG0290|consen 193 IAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILD 272 (364)
T ss_pred EecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEE
Confidence 234567889999866 56778889999999999986433222 223567888999984 4589988888 899999
Q ss_pred CCCCCCcceEEEeecCCCceEEEEEeCC-CCEEEEEECCCeEEEEECCCCcE------EEEccCCCCEEEEEEec-CCCE
Q 002591 818 VGSGSEGECVHELSCNGNKFHSCVFHPT-YPSLLVIGCYQSLELWNMSENKT------MTLTAHEGLIAALAVST-ETGY 889 (903)
Q Consensus 818 l~s~~~~~~i~~~~~~~~~i~si~~sp~-g~~l~t~s~dg~I~vwdl~~~~~------~~~~~h~~~V~sl~~sp-dg~~ 889 (903)
++.. ...+..+..|...|+.++|.|. ..+|++++.|..+.+||+..--. +....-.+.|+.+.|++ ...+
T Consensus 273 iR~P--~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dw 350 (364)
T KOG0290|consen 273 IRVP--CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDW 350 (364)
T ss_pred ecCC--CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCE
Confidence 9865 3678889999999999999996 46788889999999999975322 22234678899999986 4556
Q ss_pred EEEEecCCcEEE
Q 002591 890 VASASHDKFVKL 901 (903)
Q Consensus 890 LaSgs~DG~I~I 901 (903)
|+.+. ++++.|
T Consensus 351 iai~~-~kklei 361 (364)
T KOG0290|consen 351 IAICF-GKKLEI 361 (364)
T ss_pred EEEEe-cCeeeE
Confidence 76664 444443
No 191
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.68 E-value=7.1e-15 Score=151.35 Aligned_cols=224 Identities=16% Similarity=0.265 Sum_probs=173.5
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT---LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t---~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
.++.-..+|+|.+|++|+..+|++.....|.||.... .+..+++..|...|++|+|+|..+.|++|+.|..-+||..
T Consensus 5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~ 84 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQ 84 (361)
T ss_pred EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccccc
Confidence 3444567999999999999999999999999998763 5678899999999999999999999999999999999998
Q ss_pred CCCC--ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-------eeEEeecCceeEEEecCCCEEEE
Q 002591 695 DNPG--YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-------CTRVFKGGTAQMRFQPHLGRYLA 765 (903)
Q Consensus 695 ~~~~--~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-------~~~~~~~~~~~v~~sp~~~~ll~ 765 (903)
..++ +....+..+...++++.|+|.++ .|++|+....|.||-++... ..+.++..+.++.|+|++-.+++
T Consensus 85 ~~~~~WkptlvLlRiNrAAt~V~WsP~en-kFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa 163 (361)
T KOG1523|consen 85 PSGGTWKPTLVLLRINRAATCVKWSPKEN-KFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA 163 (361)
T ss_pred CCCCeeccceeEEEeccceeeEeecCcCc-eEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence 5433 34456667899999999999965 66799989999999887553 22334566789999999999999
Q ss_pred EEcCCeEEEEEC-----CC-------------CeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcce
Q 002591 766 AAAENVVSILDA-----ET-------------QACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGEC 826 (903)
Q Consensus 766 ~s~dg~I~i~D~-----~t-------------~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~ 826 (903)
|+.|+.+++|.. ++ |..+.++....+.|..+.|+|+|..|+-.+.| .+.+-|.....+ .
T Consensus 164 Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~--~ 241 (361)
T KOG1523|consen 164 GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSE--R 241 (361)
T ss_pred cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCch--h
Confidence 999999998853 21 22333444456789999999999999999999 888888765431 1
Q ss_pred EEEeecCCCceEEEEEeC
Q 002591 827 VHELSCNGNKFHSCVFHP 844 (903)
Q Consensus 827 i~~~~~~~~~i~si~~sp 844 (903)
+.......-+..++.|-.
T Consensus 242 v~~~~~~~lP~ls~~~is 259 (361)
T KOG1523|consen 242 VQSVATAQLPLLSVSWIS 259 (361)
T ss_pred ccchhhccCCceeeEeec
Confidence 222222234555555543
No 192
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.67 E-value=4.1e-15 Score=150.76 Aligned_cols=207 Identities=24% Similarity=0.409 Sum_probs=160.0
Q ss_pred cceeeeeEee-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCce-eEEec-----cCCCCeEEEEECC--CCCEEE
Q 002591 611 FSFKEANSVR-ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS-KTNLE-----EHSSLITDVRFSP--SMPRLA 681 (903)
Q Consensus 611 ~~~~~~~~l~-~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~-~~~l~-----~h~~~V~~l~fsp--dg~~La 681 (903)
.+++.+..+. .+-+.|.||.|.|++..||+-. |..|.+|+++.... +..+. +|....++-+|+| ++..++
T Consensus 110 ~tlE~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~ 188 (370)
T KOG1007|consen 110 STLECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVA 188 (370)
T ss_pred chhhHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEE
Confidence 3566777776 6777999999999999888875 88999999986655 33332 3567788999988 676777
Q ss_pred EEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEeecC---ceeEEEe
Q 002591 682 TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVFKGG---TAQMRFQ 757 (903)
Q Consensus 682 sgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~~~~---~~~v~~s 757 (903)
+.+ |+++..||+++..+....-..|...|..+.|+|+..++|++|++||.|+|||.+.-+ .+..+.++ +-+++|+
T Consensus 189 tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn 267 (370)
T KOG1007|consen 189 TTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFN 267 (370)
T ss_pred EeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEec
Confidence 765 899999999986655556667889999999999999999999999999999998755 45555554 4578898
Q ss_pred cCCC-EEEEEEcCCeEEEEECCCC-----------------------------eEEEEecCCCCCeEEEEEcCCCC-EEE
Q 002591 758 PHLG-RYLAAAAENVVSILDAETQ-----------------------------ACRLSLQGHTKPIDSVCWDPSGE-LLA 806 (903)
Q Consensus 758 p~~~-~ll~~s~dg~I~i~D~~t~-----------------------------~~~~~l~~h~~~V~sl~~spdg~-~la 806 (903)
|... .++++++|..|.+|....- ..+.++..|++.|.+++|+.-.. +||
T Consensus 268 ~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFA 347 (370)
T KOG1007|consen 268 PEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFA 347 (370)
T ss_pred CccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEE
Confidence 8764 5667778888888853210 12335677999999999998666 677
Q ss_pred EEeCC-eEEEEECC
Q 002591 807 SVSED-SVRVWTVG 819 (903)
Q Consensus 807 sgs~d-~I~iwdl~ 819 (903)
+-+.| .+.|=.+.
T Consensus 348 SLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 348 SLSYDGRVIISSVP 361 (370)
T ss_pred EeccCceEEeecCC
Confidence 78888 77766554
No 193
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.66 E-value=2.6e-16 Score=168.48 Aligned_cols=262 Identities=18% Similarity=0.275 Sum_probs=210.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE
Q 002591 624 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 703 (903)
Q Consensus 624 ~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~ 703 (903)
-.-+.+.|+.+|++|+.|+..|.|..+|+.+++....+.. ...|.++.|-.+..+||++- ...++|||-. +..+..
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~~--GtElHC 205 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQ-KKYVYVYDNN--GTELHC 205 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhh-hceEEEecCC--CcEEee
Confidence 3567899999999999999999999999999988888754 45699999998888887775 5679999875 667788
Q ss_pred eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee---cCceeEEEecCCCEEEEEEcCCeEEEEECCCC
Q 002591 704 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK---GGTAQMRFQPHLGRYLAAAAENVVSILDAETQ 780 (903)
Q Consensus 704 ~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~---~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~ 780 (903)
+..| ..|..+.|.|. .+||++++..|.++.-|+.+|+.+..+. +.+..++-+|.+..+-+|...|+|.+|.....
T Consensus 206 lk~~-~~v~rLeFLPy-HfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk 283 (545)
T KOG1272|consen 206 LKRH-IRVARLEFLPY-HFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK 283 (545)
T ss_pred hhhc-Cchhhhcccch-hheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCc
Confidence 7765 45888999997 6788899999999999999999887664 45667788999999999999999999999999
Q ss_pred eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEE
Q 002591 781 ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLE 859 (903)
Q Consensus 781 ~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~ 859 (903)
+++..+..|.++|.+|++.++|.|++|.+.| .|+|||+++.... ..+.. ......++++..| +++++....|.
T Consensus 284 ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql---~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~ 357 (545)
T KOG1272|consen 284 EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQL---HTYRT-PHPASNLSLSQKG--LLALSYGDHVQ 357 (545)
T ss_pred chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccccc---ceeec-CCCcccccccccc--ceeeecCCeee
Confidence 9999999999999999999999999999999 9999999987432 33222 4456667777665 66667777899
Q ss_pred EEE-CCCC---cEEEEc--cCCCCEEEEEEecCCCEEEEEecCC
Q 002591 860 LWN-MSEN---KTMTLT--AHEGLIAALAVSTETGYVASASHDK 897 (903)
Q Consensus 860 vwd-l~~~---~~~~~~--~h~~~V~sl~~spdg~~LaSgs~DG 897 (903)
||. .-.+ ....+. ...+.|.++.|+|-...|..|-..|
T Consensus 358 iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G 401 (545)
T KOG1272|consen 358 IWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGG 401 (545)
T ss_pred eehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCC
Confidence 994 3321 111222 2345899999999777776665544
No 194
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.65 E-value=6.1e-15 Score=163.01 Aligned_cols=237 Identities=15% Similarity=0.235 Sum_probs=176.1
Q ss_pred eeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 616 ANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
..++++|.+.|+|++|+.||+++|+|+.|+.|.||.-.- .-.++ .|.+.|.|+.|+|-...|++++... .-+|..
T Consensus 46 lqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~kl---EG~LkYSH~D~IQCMsFNP~~h~LasCsLsd-FglWS~ 121 (1081)
T KOG1538|consen 46 LQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKL---EGILKYSHNDAIQCMSFNPITHQLASCSLSD-FGLWSP 121 (1081)
T ss_pred ccccccccceEEEEEEccCCceeccCCCceeEEEecccc---cceeeeccCCeeeEeecCchHHHhhhcchhh-ccccCh
Confidence 456889999999999999999999999999999997542 22222 6999999999999999999998643 678987
Q ss_pred CCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee-----cCceeEEEecCCC-----EEE
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK-----GGTAQMRFQPHLG-----RYL 764 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~-----~~~~~v~~sp~~~-----~ll 764 (903)
+. +.+...+ ....|.+.+|..||.+ ++.|-.||+|.|-+....+.++.-. .++..++|+|..+ .+.
T Consensus 122 ~q--K~V~K~k-ss~R~~~CsWtnDGqy-lalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~a 197 (1081)
T KOG1538|consen 122 EQ--KSVSKHK-SSSRIICCSWTNDGQY-LALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILA 197 (1081)
T ss_pred hh--hhHHhhh-hheeEEEeeecCCCcE-EEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEE
Confidence 65 2222222 3457888999999774 5588899999998765444443322 3567789988753 455
Q ss_pred EEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEe
Q 002591 765 AAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFH 843 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s 843 (903)
+.....++.+|.+. |+.+..-+.-.-.-.|+.+.++|.|+..|+.| .+.+|.-. + ..+.++...+..|.++..+
T Consensus 198 V~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~-G---vrLGTvg~~D~WIWtV~~~ 272 (1081)
T KOG1538|consen 198 VADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRD-G---VRLGTVGEQDSWIWTVQAK 272 (1081)
T ss_pred EEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeec-C---eEEeeccccceeEEEEEEc
Confidence 55556667766654 33333222233345688999999999998888 78888643 2 4455555568899999999
Q ss_pred CCCCEEEEEECCCeEEEEECCC
Q 002591 844 PTYPSLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 844 p~g~~l~t~s~dg~I~vwdl~~ 865 (903)
|++.++++|+.||+|..|++-.
T Consensus 273 PNsQ~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 273 PNSQYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred cCCceEEEEEccCeeehhhhHH
Confidence 9999999999999999998753
No 195
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=9.1e-15 Score=168.80 Aligned_cols=230 Identities=17% Similarity=0.182 Sum_probs=162.6
Q ss_pred CCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCC-ceeEEeccCCCceEEEEecCC
Q 002591 644 DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD---KTVRVWDADNPG-YSLRTFMGHSASVMSLDFHPN 719 (903)
Q Consensus 644 Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D---g~I~IWDl~~~~-~~~~~~~~h~~~V~sl~fsp~ 719 (903)
+..|.|||.+... ...+..|...|.+++|+|||+.|++++.+ ..|++||+.++. ..+..+.+| ..+++|+|+
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPD 258 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCC
Confidence 4689999986544 56677888899999999999999988754 369999998632 223334443 446899999
Q ss_pred CCeEEEEEeCCCcEEEE--EcCCCeeeEEee--cCceeEEEecCCCEEEEEE-cCCeEEEEECC--CCeEEEEecCCCCC
Q 002591 720 KDDLICSCDGDGEIRYW--SINNGSCTRVFK--GGTAQMRFQPHLGRYLAAA-AENVVSILDAE--TQACRLSLQGHTKP 792 (903)
Q Consensus 720 ~~~ll~sgs~Dg~I~iw--Di~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s-~dg~I~i~D~~--t~~~~~~l~~h~~~ 792 (903)
+..++++.+.+|.+.|| |+.++....... .......|+|++..++.++ .++...||++. .+.. ..+ .+..
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~-~~l-~~~~- 335 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGA-SLV-GGRG- 335 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCe-EEe-cCCC-
Confidence 99888777778876555 666665443322 2356789999999877766 46777777654 3322 222 3433
Q ss_pred eEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEEC---CCCcEE
Q 002591 793 IDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNM---SENKTM 869 (903)
Q Consensus 793 V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl---~~~~~~ 869 (903)
.++.|+|||++|+..+.+.+.+||+.++... .+ ... .....+.|+|++++|++++.++.+.+|++ ......
T Consensus 336 -~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~-~l--t~~--~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~ 409 (429)
T PRK01742 336 -YSAQISADGKTLVMINGDNVVKQDLTSGSTE-VL--SST--FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKA 409 (429)
T ss_pred -CCccCCCCCCEEEEEcCCCEEEEECCCCCeE-Ee--cCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceE
Confidence 4578999999998887787778999876421 11 111 12356789999999999999987776664 344444
Q ss_pred EEccCCCCEEEEEEecC
Q 002591 870 TLTAHEGLIAALAVSTE 886 (903)
Q Consensus 870 ~~~~h~~~V~sl~~spd 886 (903)
.+..|.+.+..++|+|-
T Consensus 410 ~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 410 RLPGSDGQVKFPAWSPY 426 (429)
T ss_pred EccCCCCCCCCcccCCC
Confidence 77788888999999984
No 196
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.65 E-value=6e-14 Score=147.25 Aligned_cols=228 Identities=13% Similarity=0.182 Sum_probs=172.4
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCC--CcEEEEEcCCCe
Q 002591 665 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD--GEIRYWSINNGS 742 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D--g~I~iwDi~t~~ 742 (903)
...+..+.|+.+...|..|+.|| .++|..+...++.. .......|..+-|+.. |+|..+.+ ..+++++++.+.
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~-~~~~~~~IvEmLFSSS---LvaiV~~~qpr~Lkv~~~Kk~~ 79 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFS-KDTEGVSIVEMLFSSS---LVAIVSIKQPRKLKVVHFKKKT 79 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhc-ccCCCeEEEEeecccc---eeEEEecCCCceEEEEEcccCc
Confidence 44677888999999999999998 78888876444222 2223445667778743 55555544 458999998877
Q ss_pred eeEE--eecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecC---CCCCeEEEEEcCCCCEEEEEe-CC--eEE
Q 002591 743 CTRV--FKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQG---HTKPIDSVCWDPSGELLASVS-ED--SVR 814 (903)
Q Consensus 743 ~~~~--~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~---h~~~V~sl~~spdg~~lasgs-~d--~I~ 814 (903)
.+.. |...+.++++. .++++++-.+. |+|||+++.+.++++.. +...+.++.+++.+.|++.-+ .+ .|.
T Consensus 80 ~ICe~~fpt~IL~VrmN--r~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~ 156 (391)
T KOG2110|consen 80 TICEIFFPTSILAVRMN--RKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVV 156 (391)
T ss_pred eEEEEecCCceEEEEEc--cceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEE
Confidence 5554 44455555554 45666666555 99999999999988875 344466666666666887643 33 899
Q ss_pred EEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC-eEEEEECCCCcEE-EEcc--CCCCEEEEEEecCCCEE
Q 002591 815 VWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ-SLELWNMSENKTM-TLTA--HEGLIAALAVSTETGYV 890 (903)
Q Consensus 815 iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg-~I~vwdl~~~~~~-~~~~--h~~~V~sl~~spdg~~L 890 (903)
|||+.+. ..+..+..|.+.+.+++|+++|.+|++++..| .||||.+.+|..+ .+.. -...|.+++|++++.+|
T Consensus 157 l~d~~nl---~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L 233 (391)
T KOG2110|consen 157 LFDTINL---QPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFL 233 (391)
T ss_pred EEEcccc---eeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeE
Confidence 9999776 67788889999999999999999999999999 5799999999887 4432 24568899999999999
Q ss_pred EEEecCCcEEEcC
Q 002591 891 ASASHDKFVKLWK 903 (903)
Q Consensus 891 aSgs~DG~I~IWd 903 (903)
++.|..++|+||+
T Consensus 234 ~~sS~TeTVHiFK 246 (391)
T KOG2110|consen 234 AASSNTETVHIFK 246 (391)
T ss_pred EEecCCCeEEEEE
Confidence 9999999999986
No 197
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.64 E-value=1.1e-14 Score=160.34 Aligned_cols=230 Identities=20% Similarity=0.366 Sum_probs=162.7
Q ss_pred CCCCEEEE--EeCCCcEEEEECCC-CceeEE-ec--cCCCCeEEEEECC-CCCEEEEEeCCCcEEEEeCCCCC------c
Q 002591 633 SDGKLLAT--GGHDKKAVLWHTDT-LKSKTN-LE--EHSSLITDVRFSP-SMPRLATSSFDKTVRVWDADNPG------Y 699 (903)
Q Consensus 633 pdg~~Lat--gs~Dg~V~vWd~~t-~~~~~~-l~--~h~~~V~~l~fsp-dg~~Lasgs~Dg~I~IWDl~~~~------~ 699 (903)
.+.+++|+ ++..|.|-||++.. |+.--. +. .....|+++.|.| |...|++++.||.|+||.+..++ .
T Consensus 589 an~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~t 668 (1012)
T KOG1445|consen 589 ANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMT 668 (1012)
T ss_pred eccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCC
Confidence 34555654 45678999999873 332211 11 2456799999998 56689999999999999987643 3
Q ss_pred eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCC
Q 002591 700 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAET 779 (903)
Q Consensus 700 ~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t 779 (903)
.-..++.|...|++|.|+|-...+|++++.|-+|++||+.+.+.
T Consensus 669 Pe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~------------------------------------ 712 (1012)
T KOG1445|consen 669 PEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKL------------------------------------ 712 (1012)
T ss_pred cceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhh------------------------------------
Confidence 45678899999999999998777888999898888888876653
Q ss_pred CeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeec-CCCceEEEEEeCCCCEEEEEECCC-
Q 002591 780 QACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSC-NGNKFHSCVFHPTYPSLLVIGCYQ- 856 (903)
Q Consensus 780 ~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~-~~~~i~si~~sp~g~~l~t~s~dg- 856 (903)
...+.+|.+.|..++|+|+|+.+++.+.| +|++|.-++++. .+.+-++ .+..-..|.|.-+|+++++.+.|.
T Consensus 713 ---~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~--pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~ 787 (1012)
T KOG1445|consen 713 ---YSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ--PVYEGKGPVGTRGARILWACDGRIVIVVGFDKS 787 (1012)
T ss_pred ---hheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC--ccccCCCCccCcceeEEEEecCcEEEEeccccc
Confidence 23456799999999999999999999999 999999987643 2332221 123445678889999999998875
Q ss_pred ---eEEEEECCCCcE--E-EEc-cCCCCEEEEEEecCCC-EEEEEecCCcEEEcC
Q 002591 857 ---SLELWNMSENKT--M-TLT-AHEGLIAALAVSTETG-YVASASHDKFVKLWK 903 (903)
Q Consensus 857 ---~I~vwdl~~~~~--~-~~~-~h~~~V~sl~~spdg~-~LaSgs~DG~I~IWd 903 (903)
.|.+||..+-.. + +.. ...-.+.--.+++|.. +|++|-.|..|++|.
T Consensus 788 SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yE 842 (1012)
T KOG1445|consen 788 SERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYE 842 (1012)
T ss_pred chhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEE
Confidence 688888765432 1 110 1111111112344444 567777788888763
No 198
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.64 E-value=2.8e-14 Score=149.35 Aligned_cols=242 Identities=15% Similarity=0.195 Sum_probs=189.6
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEecc--CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE--HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~--h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
.|...|.|++|....++|++|+.+++|.+.|+++.+.+..+.. ..+.|..+..+|..+.|++.+.+|.|.+||++...
T Consensus 103 ~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 103 PHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred ccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 4668999999999999999999999999999999888877753 34589999999999999999999999999998633
Q ss_pred ce--eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-E------Eeec---CceeEEEecCCCEEEEE
Q 002591 699 YS--LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-R------VFKG---GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 699 ~~--~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-~------~~~~---~~~~v~~sp~~~~ll~~ 766 (903)
.. ...+.........+.|+|....+|++.+..+-+-+||++..... . .+.. .-..+.|++.|..|++.
T Consensus 183 ~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msi 262 (609)
T KOG4227|consen 183 NPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSI 262 (609)
T ss_pred CCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhh
Confidence 22 23333455678889999999999999999999999999865421 1 1111 12457899999999988
Q ss_pred EcCCeEEEEECCCCeEEEEecCCC-------CCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCC---------------
Q 002591 767 AAENVVSILDAETQACRLSLQGHT-------KPIDSVCWDPSGELLASVSED-SVRVWTVGSGSE--------------- 823 (903)
Q Consensus 767 s~dg~I~i~D~~t~~~~~~l~~h~-------~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~--------------- 823 (903)
-....-.+||+-+..+..--..|. ..+.+++|..|.. +++|+++ .|++|.+.....
T Consensus 263 RR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~ 341 (609)
T KOG4227|consen 263 RRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMP 341 (609)
T ss_pred hccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCc
Confidence 877777888888755443323332 3467788876544 8899999 999999854211
Q ss_pred -----cceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 002591 824 -----GECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 824 -----~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl 863 (903)
...+..+++|...+..+.|++....|++.+-.+.|+||.-
T Consensus 342 ~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 342 SEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred hhheecceeEEEecccccccceeecCCcceEeccchhhheecccc
Confidence 1244667889999999999999999999999999999964
No 199
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.63 E-value=5.3e-13 Score=149.82 Aligned_cols=264 Identities=13% Similarity=0.128 Sum_probs=175.4
Q ss_pred EE-EEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEE
Q 002591 637 LL-ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLD 715 (903)
Q Consensus 637 ~L-atgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~ 715 (903)
++ ++-..++.|.|.|..+.+.+.++......-..+.|++|++++++++.||.|.++|+.+ .+.+.++... ....+++
T Consensus 7 l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~-~~~v~~i~~G-~~~~~i~ 84 (369)
T PF02239_consen 7 LFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLAT-GKVVATIKVG-GNPRGIA 84 (369)
T ss_dssp EEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTS-SSEEEEEE-S-SEEEEEE
T ss_pred EEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCc-ccEEEEEecC-CCcceEE
Confidence 44 4555789999999999999999987655555678999999999999999999999998 6677777643 4467899
Q ss_pred ecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC----------ceeEEEecCCCEEEEEEcC-CeEEEEECCCCeEE-
Q 002591 716 FHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG----------TAQMRFQPHLGRYLAAAAE-NVVSILDAETQACR- 783 (903)
Q Consensus 716 fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~----------~~~v~~sp~~~~ll~~s~d-g~I~i~D~~t~~~~- 783 (903)
++++|+++++++..++.|.++|.++.+.++.+... +..+..++....++++-.| +.|.+.|....+.+
T Consensus 85 ~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~ 164 (369)
T PF02239_consen 85 VSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK 164 (369)
T ss_dssp E--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE
T ss_pred EcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc
Confidence 99999999988889999999999999988876532 3345667787877777665 88999998765433
Q ss_pred EEecCCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCc-------------------------------------
Q 002591 784 LSLQGHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSEG------------------------------------- 824 (903)
Q Consensus 784 ~~l~~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~------------------------------------- 824 (903)
..............|+|+++|++.+... .|-++|..+++..
T Consensus 165 ~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~ 244 (369)
T PF02239_consen 165 VTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIP 244 (369)
T ss_dssp EEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEE
T ss_pred eeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecc
Confidence 2233345667889999999987776433 7777777654211
Q ss_pred ---------------ceEEEeecCCCceEEEEEeCCCCEEEEE---E-CCCeEEEEECCCCcEEEEcc--CCCCEEEEEE
Q 002591 825 ---------------ECVHELSCNGNKFHSCVFHPTYPSLLVI---G-CYQSLELWNMSENKTMTLTA--HEGLIAALAV 883 (903)
Q Consensus 825 ---------------~~i~~~~~~~~~i~si~~sp~g~~l~t~---s-~dg~I~vwdl~~~~~~~~~~--h~~~V~sl~~ 883 (903)
+.+..+...+.. .-+..||+++++++. + ..+.|.++|..+.+.+.... ....+..+.|
T Consensus 245 ~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef 323 (369)
T PF02239_consen 245 LIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEF 323 (369)
T ss_dssp EEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE
T ss_pred cccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEE
Confidence 111111111222 345669999999998 3 34799999999998763332 2235999999
Q ss_pred ecCCCEEEEEecCC--cEEEcC
Q 002591 884 STETGYVASASHDK--FVKLWK 903 (903)
Q Consensus 884 spdg~~LaSgs~DG--~I~IWd 903 (903)
+++|+++..+..++ .|.|||
T Consensus 324 ~~dG~~v~vS~~~~~~~i~v~D 345 (369)
T PF02239_consen 324 NPDGKEVWVSVWDGNGAIVVYD 345 (369)
T ss_dssp -TTSSEEEEEEE--TTEEEEEE
T ss_pred CCCCCEEEEEEecCCCEEEEEE
Confidence 99999766655543 588886
No 200
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=3e-14 Score=164.52 Aligned_cols=222 Identities=15% Similarity=0.192 Sum_probs=157.9
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCce--eEEeccCCCCeEEEEECCCCCEEEEEe-CCCcEE
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHD---KKAVLWHTDTLKS--KTNLEEHSSLITDVRFSPSMPRLATSS-FDKTVR 690 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~D---g~V~vWd~~t~~~--~~~l~~h~~~V~~l~fspdg~~Lasgs-~Dg~I~ 690 (903)
..+..|...|.+.+|+|||+.||.++.+ ..|++||+.+++. +..+.+| ..+++|+|||+.|++++ .+|.+.
T Consensus 197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~ 273 (429)
T PRK01742 197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGH---NGAPAFSPDGSRLAFASSKDGVLN 273 (429)
T ss_pred eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCc---cCceeECCCCCEEEEEEecCCcEE
Confidence 4566788899999999999999988754 3699999987753 3333333 45789999999888765 688766
Q ss_pred EEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEeecCceeEEEecCCCEEEEEEcC
Q 002591 691 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVFKGGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~~~~~~~v~~sp~~~~ll~~s~d 769 (903)
||.++..+.....+..+...+.+..|+|++..+++++..+|.+.||++.... ....+........|+|+++.+++++.+
T Consensus 274 Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l~~~~~~~~~SpDG~~ia~~~~~ 353 (429)
T PRK01742 274 IYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLVGGRGYSAQISADGKTLVMINGD 353 (429)
T ss_pred EEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEecCCCCCccCCCCCCEEEEEcCC
Confidence 6644322334566677777888999999999888777778888888875422 222222211456799999998888775
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
+ +.+||+.+++.......+ ...++.|+|+|++|++++.+ .+.+|++... ....+..+..+...+..++|+|-
T Consensus 354 ~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~-~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 354 N-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIMIIYSSTQGLGKVLQLVSA-DGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred C-EEEEECCCCCeEEecCCC--CCCCceECCCCCEEEEEEcCCCceEEEEEEC-CCCceEEccCCCCCCCCcccCCC
Confidence 4 566999988765433322 34577899999999988877 6777765321 12566667677777888899885
No 201
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.62 E-value=1.1e-13 Score=144.45 Aligned_cols=276 Identities=15% Similarity=0.250 Sum_probs=188.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEecc-CCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCce
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSM-PRLATSSFDKTVRVWDADNPGYS 700 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~-h~~~V~~l~fspdg-~~Lasgs~Dg~I~IWDl~~~~~~ 700 (903)
+..+..++|++.-..+|++..|..|++||-.. ++...++. ....|+|++|-|.+ +.|+.|+..| |+||..+.....
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~ 175 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNA 175 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCccccc
Confidence 34678899999777889999999999999765 44555543 34679999999975 4677777655 999987643221
Q ss_pred -------------eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe---ecCceeEEEecCCCEEE
Q 002591 701 -------------LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF---KGGTAQMRFQPHLGRYL 764 (903)
Q Consensus 701 -------------~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~---~~~~~~v~~sp~~~~ll 764 (903)
+....+| ..|+++.|.+|+..++-+.-.|..|.|||+.++.++... .+++.-+.|+|++.+++
T Consensus 176 ~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lf 254 (445)
T KOG2139|consen 176 NRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLF 254 (445)
T ss_pred ccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEE
Confidence 1223345 689999999998877645556789999999999876544 24667899999999999
Q ss_pred EEEcCCeEEEEEC-CCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCc------------ceEEEee
Q 002591 765 AAAAENVVSILDA-ETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEG------------ECVHELS 831 (903)
Q Consensus 765 ~~s~dg~I~i~D~-~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~------------~~i~~~~ 831 (903)
++..|+..++|.. .+..+..-.. ..+.|...+|+|+|.+|...+.+.-++|.+....+. ..+..+.
T Consensus 255 aAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~sgsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~ 333 (445)
T KOG2139|consen 255 AATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFACSGSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQ 333 (445)
T ss_pred Eecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEEcCCceEEEEeecCCCccccCcccceeeeeeccch
Confidence 9999999999954 4443333333 345899999999999766665554445544321110 0111110
Q ss_pred ---------cCCCceEEEEEeCCCCEEEEEECCC--------eEEEEECCCCcEEEEc--c--CCCCEEEEEEec---CC
Q 002591 832 ---------CNGNKFHSCVFHPTYPSLLVIGCYQ--------SLELWNMSENKTMTLT--A--HEGLIAALAVST---ET 887 (903)
Q Consensus 832 ---------~~~~~i~si~~sp~g~~l~t~s~dg--------~I~vwdl~~~~~~~~~--~--h~~~V~sl~~sp---dg 887 (903)
--.+.+.+++|.|.|.++++.-..+ .|.+||.+..-.+.+. + .......++|+| ++
T Consensus 334 e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g 413 (445)
T KOG2139|consen 334 EVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEG 413 (445)
T ss_pred hhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccCC
Confidence 0145678999999999999986543 5777887766555332 1 111244455554 55
Q ss_pred CEEEEEecCCcEEEc
Q 002591 888 GYVASASHDKFVKLW 902 (903)
Q Consensus 888 ~~LaSgs~DG~I~IW 902 (903)
.+|..+=..|.|.-|
T Consensus 414 ~lLsiaWsTGriq~y 428 (445)
T KOG2139|consen 414 RLLSIAWSTGRIQRY 428 (445)
T ss_pred cEEEEEeccCceEee
Confidence 566666666766543
No 202
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.61 E-value=2.2e-13 Score=140.47 Aligned_cols=269 Identities=14% Similarity=0.218 Sum_probs=195.2
Q ss_pred CCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCE-EEEEeCCCcEEEEeCCCCCcee
Q 002591 624 SKVICCHFSSDGKLLA-TGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 624 ~~V~~l~fspdg~~La-tgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~-Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
+.|.-|.|..|..+++ ....|+.|.+|++...+-...+......+..++|+|||+. |.+...|-.|.||.+.+.. .
T Consensus 49 dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~--~ 126 (447)
T KOG4497|consen 49 DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK--G 126 (447)
T ss_pred HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce--e
Confidence 4677788887776554 4567889999999988888888888999999999999965 5566679999999998732 2
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEe-----------------------------------CCCcEEEEEcCCCeeeEE
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCD-----------------------------------GDGEIRYWSINNGSCTRV 746 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs-----------------------------------~Dg~I~iwDi~t~~~~~~ 746 (903)
..+......+..++|+|+|....+..- ++..+.+||.--.-.+..
T Consensus 127 ~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~a 206 (447)
T KOG4497|consen 127 YLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYA 206 (447)
T ss_pred EEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeee
Confidence 222323445677888888775432211 122344555332222222
Q ss_pred ee--cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEE---------------------------------------
Q 002591 747 FK--GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLS--------------------------------------- 785 (903)
Q Consensus 747 ~~--~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~--------------------------------------- 785 (903)
++ .++..+.|+|.+..+++|+.|+.++|.+--+.+...+
T Consensus 207 Ye~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a 286 (447)
T KOG4497|consen 207 YERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEA 286 (447)
T ss_pred eeeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCcccc
Confidence 22 3677899999999999999999888765322111110
Q ss_pred ---------------------ec------CCCCCeEEEEEcCCCCEEEEEeCC---eEEEEECCCCCCcceEEEeecCCC
Q 002591 786 ---------------------LQ------GHTKPIDSVCWDPSGELLASVSED---SVRVWTVGSGSEGECVHELSCNGN 835 (903)
Q Consensus 786 ---------------------l~------~h~~~V~sl~~spdg~~lasgs~d---~I~iwdl~s~~~~~~i~~~~~~~~ 835 (903)
++ .....+.-++|++|..|+++-.+. .+.+||+...+ ++.+-....
T Consensus 287 ~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~----l~avLiQk~ 362 (447)
T KOG4497|consen 287 HIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLK----LHAVLIQKH 362 (447)
T ss_pred CccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhh----hhhhhhhcc
Confidence 00 011235568999999999998877 68999998653 222333467
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCc
Q 002591 836 KFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKF 898 (903)
Q Consensus 836 ~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~ 898 (903)
+|....|+|....|+++.....+++|.......+......-.|..+.|.-+|..++..+.|..
T Consensus 363 piraf~WdP~~prL~vctg~srLY~W~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDaf 425 (447)
T KOG4497|consen 363 PIRAFEWDPGRPRLVVCTGKSRLYFWAPSGPRVVGVPKKGFNIQKLQWLQPGEFIVLCGKDAF 425 (447)
T ss_pred ceeEEEeCCCCceEEEEcCCceEEEEcCCCceEEecCCCCceeeeEEecCCCcEEEEEcCCce
Confidence 899999999999999999999999999998888877777789999999999999999988864
No 203
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.60 E-value=1.3e-13 Score=151.19 Aligned_cols=275 Identities=14% Similarity=0.160 Sum_probs=203.9
Q ss_pred cCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCc
Q 002591 621 ASTSKVICCHFSSDGKLL-ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGY 699 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~L-atgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~ 699 (903)
.|....+.|..+|||.|| |||.+--.|++||+........-......|.-+-++.|-..++.-..|.+|.+..... .
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G--~ 126 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG--R 126 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcC--e
Confidence 477788999999999965 6677888999999987665554444455666666777777777777788887765432 1
Q ss_pred eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee---cCceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 700 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK---GGTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 700 ~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~---~~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
... +. -...-.+++++.-...+++ ++....|+-++++.|..+..|. +.+.++.+++..+.|++|+.+|.|.+||
T Consensus 127 hy~-~R-IP~~GRDm~y~~~scDly~-~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwD 203 (703)
T KOG2321|consen 127 HYR-TR-IPKFGRDMKYHKPSCDLYL-VGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWD 203 (703)
T ss_pred eee-ee-cCcCCccccccCCCccEEE-eecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEec
Confidence 111 11 1233445666655555664 4446789999999999888775 4677888999999999999999999999
Q ss_pred CCCCeEEEEecC------CCC-----CeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeC
Q 002591 777 AETQACRLSLQG------HTK-----PIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP 844 (903)
Q Consensus 777 ~~t~~~~~~l~~------h~~-----~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp 844 (903)
.++...+..+.. |.+ .|+++.|+.+|-.+++|+.. .|.|||+++... .+..-.....+|..+.|.+
T Consensus 204 pR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~p--l~~kdh~~e~pi~~l~~~~ 281 (703)
T KOG2321|consen 204 PRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKP--LLVKDHGYELPIKKLDWQD 281 (703)
T ss_pred chhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCc--eeecccCCccceeeecccc
Confidence 998766655542 333 39999999999999999888 999999998642 2223333466788899977
Q ss_pred CCCE-EEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 845 TYPS-LLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 845 ~g~~-l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
.+.. -++......++|||-.+|+..........++.+|+-|++.+|++|-+++.+..|
T Consensus 282 ~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~y 340 (703)
T KOG2321|consen 282 TDQQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTY 340 (703)
T ss_pred cCCCceEEecchHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeE
Confidence 6333 333344468999999999999777777779999999999999999988876543
No 204
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.60 E-value=4.3e-14 Score=154.00 Aligned_cols=242 Identities=15% Similarity=0.193 Sum_probs=165.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCce----eEEeccCCCCeEEEEE-----CCCCCEEEEEeCCCcEEEEeCC
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS----KTNLEEHSSLITDVRF-----SPSMPRLATSSFDKTVRVWDAD 695 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~----~~~l~~h~~~V~~l~f-----spdg~~Lasgs~Dg~I~IWDl~ 695 (903)
.++...++-.|++|+..- ...++||+...+.. +....-....-+|-+| .+.+--|+.|-..|.|.+.|..
T Consensus 125 ~~~~~~~~~~gd~lcFnv-g~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~ 203 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFNV-GRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPI 203 (636)
T ss_pred ceeeccccCCCCEEEEec-CCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecch
Confidence 455566666777777653 34688888763211 1111111222334444 3456678888888999999876
Q ss_pred CCCceeEEec----cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeE--EEecCCCEEEEEEcC
Q 002591 696 NPGYSLRTFM----GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQM--RFQPHLGRYLAAAAE 769 (903)
Q Consensus 696 ~~~~~~~~~~----~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v--~~sp~~~~ll~~s~d 769 (903)
. ....+.+. -....|+||.|-|.++.+++++-.+|.+++||.+. ....... ...+++..+......
T Consensus 204 ~-~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~-------~~~~t~p~~~~~k~~~~f~i~t~k 275 (636)
T KOG2394|consen 204 N-FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEI-------VCGATAPSYQALKDGDQFAILTSK 275 (636)
T ss_pred h-hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccc-------cccCCCCcccccCCCCeeEEeeee
Confidence 5 22222121 13478999999999998988999999999998721 1111111 122233333222111
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCE
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~ 848 (903)
...+..++..+.--.+.|..++|+|||++||+.+.| .+||||+.+. +.+..++..-+.+.+++|+|||++
T Consensus 276 ------sk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~---eLlg~mkSYFGGLLCvcWSPDGKy 346 (636)
T KOG2394|consen 276 ------SKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQ---ELLGVMKSYFGGLLCVCWSPDGKY 346 (636)
T ss_pred ------ccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHH---HHHHHHHhhccceEEEEEcCCccE
Confidence 111123444444455689999999999999999999 9999999875 444455555778999999999999
Q ss_pred EEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEe
Q 002591 849 LLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVS 884 (903)
Q Consensus 849 l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~s 884 (903)
|++|+.|.-|.||.+.+++++ .-.+|.++|+.++|+
T Consensus 347 IvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 347 IVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred EEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 999999999999999999998 677999999999998
No 205
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=4.1e-14 Score=164.10 Aligned_cols=266 Identities=15% Similarity=0.203 Sum_probs=187.4
Q ss_pred CCcccccccCcceeeeeEeecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECC-C----CceeEEecc-------CCC
Q 002591 601 GGRGMDVSQGFSFKEANSVRASTSKVICCHFSS--DGKLLATGGHDKKAVLWHTD-T----LKSKTNLEE-------HSS 666 (903)
Q Consensus 601 ~~~~~d~~~~~~~~~~~~l~~H~~~V~~l~fsp--dg~~Latgs~Dg~V~vWd~~-t----~~~~~~l~~-------h~~ 666 (903)
..++|++.++-.+.-...-..-...|+.+++-. |..+|++|+.||.|+||+-. + .+.+..+.+ ..+
T Consensus 1087 ~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~ 1166 (1387)
T KOG1517|consen 1087 RIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARG 1166 (1387)
T ss_pred eEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCC
Confidence 446677776654444333334566899999865 45699999999999999732 2 233333321 222
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe---e
Q 002591 667 LITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS---C 743 (903)
Q Consensus 667 ~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~---~ 743 (903)
.-.-++|.....+|++++.-..|+|||++.+..+...-.+....|+++.-.-.+..+|++|..||.|++||.+... .
T Consensus 1167 ~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~ 1246 (1387)
T KOG1517|consen 1167 TGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSL 1246 (1387)
T ss_pred CCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCcccc
Confidence 2245677777677777777899999999985444444455667788887766666788899999999999998653 2
Q ss_pred eEEeec-----CceeEEEecCC-CEEEEEEcCCeEEEEECCCCeE--EEEecCCC---CCeEEEEEcCCCCEEEEEeCCe
Q 002591 744 TRVFKG-----GTAQMRFQPHL-GRYLAAAAENVVSILDAETQAC--RLSLQGHT---KPIDSVCWDPSGELLASVSEDS 812 (903)
Q Consensus 744 ~~~~~~-----~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~~--~~~l~~h~---~~V~sl~~spdg~~lasgs~d~ 812 (903)
+..++. ++..+.+.+.| +.+++++.+|.|++||++.... ...+..|. +.++++..++...++|+|+...
T Consensus 1247 v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~q~ 1326 (1387)
T KOG1517|consen 1247 VCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSAQL 1326 (1387)
T ss_pred ceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCcce
Confidence 333332 26667777765 5699999999999999998422 22222332 3599999999999999999889
Q ss_pred EEEEECCCCCCcceEEE----eecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc
Q 002591 813 VRVWTVGSGSEGECVHE----LSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK 867 (903)
Q Consensus 813 I~iwdl~s~~~~~~i~~----~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~ 867 (903)
|+||++.... ...++. +.-....+.+++|||..-.+++|..|..|.||......
T Consensus 1327 ikIy~~~G~~-l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1327 IKIYSLSGEQ-LNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred EEEEecChhh-hcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 9999986431 122211 11124567899999999999999999999999876543
No 206
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.60 E-value=2.8e-13 Score=156.08 Aligned_cols=273 Identities=23% Similarity=0.256 Sum_probs=196.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC---EEEEEeCCCcEEEEeCCCCCceeE
Q 002591 626 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP---RLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 626 V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~---~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
-..-.|++|+++++... +..|.||.+.++.++..+.+|..+++.+.+.+... ++++++.||+|++||... +..++
T Consensus 19 ~~~avfSnD~k~l~~~~-~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~-~~Llk 96 (792)
T KOG1963|consen 19 KSPAVFSNDAKFLFLCT-GNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSD-GELLK 96 (792)
T ss_pred ecccccccCCcEEEEee-CCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCC-cEEEE
Confidence 34456899999888775 55899999999999999999999999999987654 678999999999999987 77777
Q ss_pred EeccCCCceEEEEecCC---CCeEEEEEeCCCc------------EEEEEcCCCeee--EEeecC--ceeEEEecCCCEE
Q 002591 703 TFMGHSASVMSLDFHPN---KDDLICSCDGDGE------------IRYWSINNGSCT--RVFKGG--TAQMRFQPHLGRY 763 (903)
Q Consensus 703 ~~~~h~~~V~sl~fsp~---~~~ll~sgs~Dg~------------I~iwDi~t~~~~--~~~~~~--~~~v~~sp~~~~l 763 (903)
++..+ ..|..+.+.|. ..-.+..+..|.. ++-+.+.+.... ...+.. ...+.+.+. +.+
T Consensus 97 t~~~~-~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~-ge~ 174 (792)
T KOG1963|consen 97 TFDNN-LPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNS-GEF 174 (792)
T ss_pred EEecC-CceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCC-ceE
Confidence 77643 33444444221 1111112221211 111111111000 000111 234445444 455
Q ss_pred EEEEcCCeEEEEECCCCeEEEE----ecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCC-CCCcceEEEeecCCCce
Q 002591 764 LAAAAENVVSILDAETQACRLS----LQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGS-GSEGECVHELSCNGNKF 837 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t~~~~~~----l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s-~~~~~~i~~~~~~~~~i 837 (903)
.....+..+.+|+..+...... -..|...+++.+++|+++++|++..| .|.+|.--. .........+.-|...|
T Consensus 175 ~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V 254 (792)
T KOG1963|consen 175 KGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEV 254 (792)
T ss_pred EEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEeccccc
Confidence 5556667788888877541111 12366779999999999999999988 999996543 33345556777889999
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 838 HSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
.+++|+++|.+|++||.++.+.+|.+.+++...+..-.++|..+.++||+.+.+....|+.|.+-
T Consensus 255 ~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li 319 (792)
T KOG1963|consen 255 NSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLI 319 (792)
T ss_pred ceeEEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEE
Confidence 99999999999999999999999999999977888889999999999999999999999998763
No 207
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.59 E-value=6.1e-13 Score=153.39 Aligned_cols=232 Identities=14% Similarity=0.146 Sum_probs=167.1
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCC
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF---DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~---Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~ 721 (903)
..|.+||.+... .+.+..+...+.+.+|+|||+.|+..+. +..|++||+.+ +.. +.+......+..++|+|++.
T Consensus 179 ~~l~~~d~dg~~-~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~-G~~-~~l~~~~~~~~~~~~SPDG~ 255 (429)
T PRK03629 179 YELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-GAV-RQVASFPRHNGAPAFSPDGS 255 (429)
T ss_pred eeEEEEcCCCCC-CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCC-CCe-EEccCCCCCcCCeEECCCCC
Confidence 468899987543 4445567778999999999999887653 45699999986 432 23333334455689999999
Q ss_pred eEEEEEeCCC--cEEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEcC-C--eEEEEECCCCeEEEEecCCCCCeE
Q 002591 722 DLICSCDGDG--EIRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAAE-N--VVSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 722 ~ll~sgs~Dg--~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~d-g--~I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
.++++.+.+| .|++||+.+++....... ......|+|+++.++.++.+ + .|+++|+.++... .+..+...+.
T Consensus 256 ~La~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~ 334 (429)
T PRK03629 256 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQ 334 (429)
T ss_pred EEEEEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCcc
Confidence 8887766665 488999998876654433 45678899999998887764 3 5666688776543 3333444566
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCc
Q 002591 795 SVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---SLELWNMSENK 867 (903)
Q Consensus 795 sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---~I~vwdl~~~~ 867 (903)
+.+|+|||++|+..+.+ .|++||+.++.. . .+.. ........|+|||++|+.++.++ .++++++....
T Consensus 335 ~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~---~Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~ 409 (429)
T PRK03629 335 DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-Q---VLTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRF 409 (429)
T ss_pred CEEECCCCCEEEEEEccCCCceEEEEECCCCCe-E---EeCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCC
Confidence 78999999988776543 588999977632 2 2221 12234678999999999999876 47888997777
Q ss_pred EEEEccCCCCEEEEEEec
Q 002591 868 TMTLTAHEGLIAALAVST 885 (903)
Q Consensus 868 ~~~~~~h~~~V~sl~~sp 885 (903)
...+..|.+.+...+|+|
T Consensus 410 ~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 410 KARLPATDGQVKFPAWSP 427 (429)
T ss_pred eEECccCCCCcCCcccCC
Confidence 777888889999999987
No 208
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.59 E-value=2.1e-14 Score=153.25 Aligned_cols=191 Identities=24% Similarity=0.290 Sum_probs=152.4
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEec-
Q 002591 627 ICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM- 705 (903)
Q Consensus 627 ~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~- 705 (903)
.+++|+.+|..|++|+.||++|||++.....+..+..|...|.++.|+||+++|++-+.| ..+||++++ +.++....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~-g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNT-GAALARKTP 225 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEecc-CchhhhcCC
Confidence 789999999999999999999999999888888889999999999999999999999999 899999998 44444333
Q ss_pred -cCCCceEEEEecCCC---Ce-EEEEEeCCCcEEEEEcCCCee---eE---Ee--ecCceeEEEecCCCEEEEEEcCCeE
Q 002591 706 -GHSASVMSLDFHPNK---DD-LICSCDGDGEIRYWSINNGSC---TR---VF--KGGTAQMRFQPHLGRYLAAAAENVV 772 (903)
Q Consensus 706 -~h~~~V~sl~fsp~~---~~-ll~sgs~Dg~I~iwDi~t~~~---~~---~~--~~~~~~v~~sp~~~~ll~~s~dg~I 772 (903)
.....+..+.|+.++ .. +++....-+.|+.||+...+. .+ .. ...+.+++++.+|+++++++.||.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 233445567787664 22 333334456677777653322 11 11 2367889999999999999999999
Q ss_pred EEEECCCCeEEEEec-CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 002591 773 SILDAETQACRLSLQ-GHTKPIDSVCWDPSGELLASVSED-SVRVWTVG 819 (903)
Q Consensus 773 ~i~D~~t~~~~~~l~-~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~ 819 (903)
.|++..+.+++..++ .|...|+.+.|+||.+++++.+.+ .+.|..+.
T Consensus 306 ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLA 354 (398)
T ss_pred EEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEe
Confidence 999999988777654 599999999999999999998888 77777664
No 209
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.58 E-value=3e-14 Score=154.71 Aligned_cols=206 Identities=16% Similarity=0.204 Sum_probs=166.3
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEE
Q 002591 636 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLD 715 (903)
Q Consensus 636 ~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~ 715 (903)
..|+.++.||.+.|.+ +.++..+.+..|.+.|.|-+|++||.-|++++.||.|+||.-. +....++.....+|+|++
T Consensus 76 d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrs--GMLRStl~Q~~~~v~c~~ 152 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRS--GMLRSTVVQNEESIRCAR 152 (737)
T ss_pred ceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEecc--chHHHHHhhcCceeEEEE
Confidence 4678888999999987 5678888999999999999999999999999999999999865 444555666778999999
Q ss_pred ecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe---ecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCC
Q 002591 716 FHPNKDDLICSCDGDGEIRYWSINNGSCTRVF---KGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKP 792 (903)
Q Consensus 716 fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~---~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~ 792 (903)
|.|+.+.++++.+ +.+.|=-+.....+-.+ .+-+.++.|++..+.+++++.|-..+|||.. |..++.-..|+.+
T Consensus 153 W~p~S~~vl~c~g--~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ 229 (737)
T KOG1524|consen 153 WAPNSNSIVFCQG--GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYA 229 (737)
T ss_pred ECCCCCceEEecC--CeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccc
Confidence 9999998886654 45555555444333333 3457788999999999999999999999975 5666666779999
Q ss_pred eEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 002591 793 IDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWN 862 (903)
Q Consensus 793 V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwd 862 (903)
|++++|.|+ +.++.++..++++=..+ .+.|..++|++||..+++|+..|.|.+-.
T Consensus 230 ITSva~npd-~~~~v~S~nt~R~~~p~--------------~GSifnlsWS~DGTQ~a~gt~~G~v~~A~ 284 (737)
T KOG1524|consen 230 ITSVAFNPE-KDYLLWSYNTARFSSPR--------------VGSIFNLSWSADGTQATCGTSTGQLIVAY 284 (737)
T ss_pred eeeeeeccc-cceeeeeeeeeeecCCC--------------ccceEEEEEcCCCceeeccccCceEEEee
Confidence 999999999 77888888777733332 56789999999999999999998765543
No 210
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.57 E-value=1.3e-12 Score=144.03 Aligned_cols=268 Identities=18% Similarity=0.304 Sum_probs=188.3
Q ss_pred CeEEEEEcCCCCEEEEEe-----C-----CCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 625 KVICCHFSSDGKLLATGG-----H-----DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs-----~-----Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
.++++.|+|-|.+|.|-- . .-.+.+|+++++.....+......-+++.|+.|..+.+- -..+.|.+|++
T Consensus 75 ~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEsl~ar-lv~nev~f~~~ 153 (566)
T KOG2315|consen 75 KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDESLAAR-LVSNEVQFYDL 153 (566)
T ss_pred eeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchhhhhh-hhcceEEEEec
Confidence 799999999999998721 1 235779999996666666544444479999998764322 22566999999
Q ss_pred CCCCceeEEeccCCCceEEEEecCC-CCeEEEE-----EeCCCcEEEEEcCCCe------eeEEeecCceeEEEecCCCE
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPN-KDDLICS-----CDGDGEIRYWSINNGS------CTRVFKGGTAQMRFQPHLGR 762 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~-~~~ll~s-----gs~Dg~I~iwDi~t~~------~~~~~~~~~~~v~~sp~~~~ 762 (903)
.+.......+ |...|..+.++|. ....+|+ .+.-+.|+||.+.... +..-|+.....+.|.+.+.-
T Consensus 154 ~~f~~~~~kl--~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~ 231 (566)
T KOG2315|consen 154 GSFKTIQHKL--SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTA 231 (566)
T ss_pred CCccceeeee--eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCce
Confidence 8743333333 5778999999987 3334433 3445779999887322 22334556667888888754
Q ss_pred EEE-EEc-----------CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEE-e-CC-eEEEEECCCCCCcceE
Q 002591 763 YLA-AAA-----------ENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASV-S-ED-SVRVWTVGSGSEGECV 827 (903)
Q Consensus 763 ll~-~s~-----------dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasg-s-~d-~I~iwdl~s~~~~~~i 827 (903)
|++ ++. +.+++++++....++..+. ..++|++++|+++++-|+++ + .- .+.|||++. ..+
T Consensus 232 LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~----~~v 306 (566)
T KOG2315|consen 232 LLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG----KPV 306 (566)
T ss_pred EEEEEEEeecCCCccccccceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCC----CEe
Confidence 443 332 2378888888556666555 57999999999999844443 3 33 899999964 333
Q ss_pred EEeecCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEec------CCc
Q 002591 828 HELSCNGNKFHSCVFHPTYPSLLVIGCY---QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASH------DKF 898 (903)
Q Consensus 828 ~~~~~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~------DG~ 898 (903)
..+ ..++-.++-|+|.|++|+.+|.+ |.|.|||+.+.+++..... ..-+-+.|+|||.+|+|+.. |+.
T Consensus 307 ~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a-~~tt~~eW~PdGe~flTATTaPRlrvdNg 383 (566)
T KOG2315|consen 307 FDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA-ANTTVFEWSPDGEYFLTATTAPRLRVDNG 383 (566)
T ss_pred EeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc-CCceEEEEcCCCcEEEEEeccccEEecCC
Confidence 333 36777889999999999999887 6999999999777733222 22455789999999999874 677
Q ss_pred EEEcC
Q 002591 899 VKLWK 903 (903)
Q Consensus 899 I~IWd 903 (903)
++||+
T Consensus 384 ~Kiwh 388 (566)
T KOG2315|consen 384 IKIWH 388 (566)
T ss_pred eEEEE
Confidence 88884
No 211
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.57 E-value=2.6e-13 Score=143.88 Aligned_cols=237 Identities=16% Similarity=0.182 Sum_probs=160.7
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
.|...+.+++|.+.|+.++|++|+.++++++.|..+++||+..|..+..+.+|...|..++|.|-+.++++-+.|...++
T Consensus 112 ~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~ 191 (434)
T KOG1009|consen 112 KWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEG 191 (434)
T ss_pred ceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccce
Confidence 57788899999999999999999999999999999999999999999999999999999999999999999999987777
Q ss_pred EeCCCCCceeEEeccCCC-ceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEc--
Q 002591 692 WDADNPGYSLRTFMGHSA-SVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAA-- 768 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~-~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~-- 768 (903)
+++.... .+. .|.. .+....+.+. .....++|.-++.+ .-...++|+|++..+++.+.
T Consensus 192 ~~~~~~~-~~~---~~~~~~m~~~~~~~~---------e~~s~rLfhDeTlk------sFFrRlsfTPdG~llvtPag~~ 252 (434)
T KOG1009|consen 192 FSAKLKQ-VIK---RHGLDIMPAKAFNER---------EGKSTRLFHDETLK------SFFRRLSFTPDGSLLVTPAGLF 252 (434)
T ss_pred eeeeeee-eee---eeeeeEeeecccCCC---------CcceeeeeecCchh------hhhhhcccCCCCcEEEccccee
Confidence 7765411 111 1110 0111111111 11122222222211 12334556666666655432
Q ss_pred --C-----CeEEEEECCCC-eEEEEecCCCCCeEEEEEcC------------------CCCEEEEEeCCeEEEEECCCCC
Q 002591 769 --E-----NVVSILDAETQ-ACRLSLQGHTKPIDSVCWDP------------------SGELLASVSEDSVRVWTVGSGS 822 (903)
Q Consensus 769 --d-----g~I~i~D~~t~-~~~~~l~~h~~~V~sl~~sp------------------dg~~lasgs~d~I~iwdl~s~~ 822 (903)
+ +..++|+-... +++..+.+...++..+.|+| -+..++.++.+.|+|||..+..
T Consensus 253 ~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~~svyvydtq~~~ 332 (434)
T KOG1009|consen 253 KVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATKNSVYVYDTQTLE 332 (434)
T ss_pred eeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEeecceEEEecccccc
Confidence 1 23344443322 34444444444544444443 3446788888899999998765
Q ss_pred CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 823 EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 823 ~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
...++.. .|...|+.++|+++|..+++.+.||...+..++..++-
T Consensus 333 P~~~v~n--ihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg 377 (434)
T KOG1009|consen 333 PLAVVDN--IHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG 377 (434)
T ss_pred ceEEEee--eeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence 4444443 46788999999999999999999997777766655543
No 212
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.56 E-value=3e-13 Score=139.49 Aligned_cols=271 Identities=18% Similarity=0.202 Sum_probs=191.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCceeEEecc
Q 002591 628 CCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS-SFDKTVRVWDADNPGYSLRTFMG 706 (903)
Q Consensus 628 ~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasg-s~Dg~I~IWDl~~~~~~~~~~~~ 706 (903)
-++|||+|++||+++.- .+.|-|.++.+....+.. -+.|.-|.|..|..+++++ ..|+.|.+|++..+. -...+..
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpe-w~ckIde 89 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPE-WYCKIDE 89 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeecce-eEEEecc
Confidence 46899999999999755 788889888766555443 4568889999888877666 558899999998743 3455666
Q ss_pred CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE--eecCceeEEEecCCCEEEEEEcC---------------
Q 002591 707 HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV--FKGGTAQMRFQPHLGRYLAAAAE--------------- 769 (903)
Q Consensus 707 h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~--~~~~~~~v~~sp~~~~ll~~s~d--------------- 769 (903)
....+.+++|+|+|++++.+..-|-.|.+|.+.+.++... -+..+..++|++++.+.+.++.-
T Consensus 90 g~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ 169 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWI 169 (447)
T ss_pred CCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHH
Confidence 7788999999999999999999999999999998775432 23455666777776655444331
Q ss_pred ---------------------CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC-----
Q 002591 770 ---------------------NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGS----- 822 (903)
Q Consensus 770 ---------------------g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~----- 822 (903)
+.+.+||.--...+..++ -.-.+..+.|+|.+.+|+.|+.| .+||.+--+.+
T Consensus 170 ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe-~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~ef 248 (447)
T KOG4497|consen 170 LLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYE-RGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEF 248 (447)
T ss_pred HHHhcCCCcccccCceECCCCcEEEEecchhhheeeeee-eccceeEEEeccccceEEeeccchhhhhhceeeeeehhhh
Confidence 123334332222211111 22467889999999999999999 77764421110
Q ss_pred ------------------------------------------C----------cceEEEee------cCCCceEEEEEeC
Q 002591 823 ------------------------------------------E----------GECVHELS------CNGNKFHSCVFHP 844 (903)
Q Consensus 823 ------------------------------------------~----------~~~i~~~~------~~~~~i~si~~sp 844 (903)
. ...+..++ .....+..++|++
T Consensus 249 lhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~ 328 (447)
T KOG4497|consen 249 LHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSC 328 (447)
T ss_pred ccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecC
Confidence 0 00011111 1122356789999
Q ss_pred CCCEEEEEECC--CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 845 TYPSLLVIGCY--QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 845 ~g~~l~t~s~d--g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
|..++++-... +.+.+||+...++..+.....+|.+..|+|....|+.+.....+++|
T Consensus 329 Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W 388 (447)
T KOG4497|consen 329 DSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFW 388 (447)
T ss_pred CceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEE
Confidence 99888776554 58999999999888777778899999999998888887777778888
No 213
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.56 E-value=3e-13 Score=142.92 Aligned_cols=261 Identities=13% Similarity=0.189 Sum_probs=197.5
Q ss_pred cCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEECCCCceeEE------eccCCCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 002591 621 ASTSKVICCHFSSDGK--LLATGGHDKKAVLWHTDTLKSKTN------LEEHSSLITDVRFSPSMPRLATSSFDKTVRVW 692 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~--~Latgs~Dg~V~vWd~~t~~~~~~------l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IW 692 (903)
.-...|..++|..++. .|...+.|..+..+++........ .......|..++... ..|++|-.+|.+.+|
T Consensus 53 ~~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~d--g~Litc~~sG~l~~~ 130 (412)
T KOG3881|consen 53 DELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLAD--GTLITCVSSGNLQVR 130 (412)
T ss_pred chhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcC--CEEEEEecCCcEEEE
Confidence 3456788888887664 555555777788887765554443 334556676666543 378888889999999
Q ss_pred eCCCCC---ceeEEeccCCCceEEEEecCCCCeEEEEEeCC--CcEEEEEcCCCeeeEEeec------------CceeEE
Q 002591 693 DADNPG---YSLRTFMGHSASVMSLDFHPNKDDLICSCDGD--GEIRYWSINNGSCTRVFKG------------GTAQMR 755 (903)
Q Consensus 693 Dl~~~~---~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D--g~I~iwDi~t~~~~~~~~~------------~~~~v~ 755 (903)
..+.+. ..+..+..+ ..+..+.-++...+++++|+.. ..+.|||++..+.+..-+. -...+.
T Consensus 131 ~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~ 209 (412)
T KOG3881|consen 131 HDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIR 209 (412)
T ss_pred eccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccce
Confidence 987422 233334333 5577788888889999999999 8999999998754433221 134577
Q ss_pred EecC--CCEEEEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEee
Q 002591 756 FQPH--LGRYLAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELS 831 (903)
Q Consensus 756 ~sp~--~~~ll~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~ 831 (903)
|.+. ...|++++.-+.|++||.+.+ +++..|.-.+.+|+++...|++++|+++..- .+..||++.+... ...+.
T Consensus 210 Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~--g~~~k 287 (412)
T KOG3881|consen 210 FLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLL--GCGLK 287 (412)
T ss_pred ecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceee--ccccC
Confidence 8777 788999999999999999987 6788888888999999999999999999887 9999999987322 22356
Q ss_pred cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecC
Q 002591 832 CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTE 886 (903)
Q Consensus 832 ~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spd 886 (903)
+..+.|.++..+|..+++++++-|+.|+|+|+.+.+++.-......+++|.+.++
T Consensus 288 g~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 288 GITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDD 342 (412)
T ss_pred CccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEEEecCC
Confidence 6678899999999999999999999999999999777644445556667766543
No 214
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.55 E-value=4e-13 Score=138.61 Aligned_cols=235 Identities=17% Similarity=0.295 Sum_probs=179.6
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEE
Q 002591 660 NLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG--YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWS 737 (903)
Q Consensus 660 ~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~--~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwD 737 (903)
.+.....+|+|.+|++|...+|++.....|.||...... +..+++..|...|++|+|.|..++++ +|+.|..-++|.
T Consensus 5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIv-tcs~drnayVw~ 83 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIV-TCSHDRNAYVWT 83 (361)
T ss_pred EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCcee-EccCCCCccccc
Confidence 344456789999999999999999999999999987643 56789999999999999999988765 999999999999
Q ss_pred cC-CCe-----eeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeE----EEEecCCCCCeEEEEEcCCCCEEEE
Q 002591 738 IN-NGS-----CTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQAC----RLSLQGHTKPIDSVCWDPSGELLAS 807 (903)
Q Consensus 738 i~-t~~-----~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~----~~~l~~h~~~V~sl~~spdg~~las 807 (903)
.. .++ .+..+.....++.|+|.++.|++++....|.||-.+...- .+.-+.+.+.|+++.|+|++-++++
T Consensus 84 ~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa 163 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA 163 (361)
T ss_pred cCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence 84 333 3345667889999999999999999999999887664321 1222346788999999999999999
Q ss_pred EeCC-eEEEEECC-----CCC----------CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc--EE
Q 002591 808 VSED-SVRVWTVG-----SGS----------EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK--TM 869 (903)
Q Consensus 808 gs~d-~I~iwdl~-----s~~----------~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~--~~ 869 (903)
|+.| ..+||..- ... -...+.++....+.+..+.|+|.|..|+-.+.|..|.+-|..... ..
T Consensus 164 Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~ 243 (361)
T KOG1523|consen 164 GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQ 243 (361)
T ss_pred cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhcc
Confidence 9999 88888642 110 012233444557789999999999999999999999999988775 33
Q ss_pred EEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 870 TLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 870 ~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
.+....-+..++.|-.+.. ++.+++|
T Consensus 244 ~~~~~~lP~ls~~~ise~~-vv~ag~~ 269 (361)
T KOG1523|consen 244 SVATAQLPLLSVSWISENS-VVAAGYD 269 (361)
T ss_pred chhhccCCceeeEeecCCc-eeecCCC
Confidence 3333336667777754432 3333444
No 215
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=2e-12 Score=149.79 Aligned_cols=231 Identities=17% Similarity=0.239 Sum_probs=166.6
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCC
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF---DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~---Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~ 721 (903)
..|.+||.+ +...+.+..|...|.+.+|+|||+.|+..+. +..|++||+.+ +. ...+..+.+.+.+.+|+|+|+
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~-g~-~~~l~~~~g~~~~~~~SPDG~ 258 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLET-GQ-RELVGNFPGMTFAPRFSPDGR 258 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCC-Cc-EEEeecCCCcccCcEECCCCC
Confidence 478888875 4555667788889999999999999888764 46799999986 33 344555667788899999999
Q ss_pred eEEEEEeCCCc--EEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEc-C--CeEEEEECCCCeEEEEecCCCCCeE
Q 002591 722 DLICSCDGDGE--IRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAA-E--NVVSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 722 ~ll~sgs~Dg~--I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~-d--g~I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
.++++.+.++. |++||+.++........ ......|+|++..++.++. + ..|+++|+..++... +..+...+.
T Consensus 259 ~la~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~-lt~~~~~~~ 337 (435)
T PRK05137 259 KVVMSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRR-ISFGGGRYS 337 (435)
T ss_pred EEEEEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEE-eecCCCccc
Confidence 88878777665 77789888776544332 2456889999998887764 3 368889987765543 333455667
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC------CeEEEEECC
Q 002591 795 SVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY------QSLELWNMS 864 (903)
Q Consensus 795 sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d------g~I~vwdl~ 864 (903)
...|+|+|++|+....+ .|.+||+..+. ...+.. ...+....|+|||+.|+..+.+ ..|+++|+.
T Consensus 338 ~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~----~~~lt~-~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~ 412 (435)
T PRK05137 338 TPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG----ERILTS-GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLT 412 (435)
T ss_pred CeEECCCCCEEEEEEcCCCceEEEEEECCCCc----eEeccC-CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECC
Confidence 78999999988776543 68888875442 122222 2346678999999998876653 268888988
Q ss_pred CCcEEEEccCCCCEEEEEEec
Q 002591 865 ENKTMTLTAHEGLIAALAVST 885 (903)
Q Consensus 865 ~~~~~~~~~h~~~V~sl~~sp 885 (903)
.+....+. ..+.+...+|+|
T Consensus 413 g~~~~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 413 GRNEREVP-TPGDASDPAWSP 432 (435)
T ss_pred CCceEEcc-CCCCccCcccCC
Confidence 77665544 355577778876
No 216
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.55 E-value=1.3e-12 Score=151.06 Aligned_cols=232 Identities=17% Similarity=0.145 Sum_probs=165.9
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCC
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD---KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D---g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~ 721 (903)
..|.+||.+ +...+.+..+...+.+.+|+||++.|+.++.+ ..|++||+.+ +.. ..+..+.+...++.|+|+++
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~-g~~-~~l~~~~g~~~~~~~SpDG~ 260 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLAT-GQR-ELVASFRGINGAPSFSPDGR 260 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCC-CCE-EEeccCCCCccCceECCCCC
Confidence 468999985 44556677778889999999999999988753 4699999976 332 33344445556789999999
Q ss_pred eEEEEEeCCC--cEEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEc-CC--eEEEEECCCCeEEEEecCCCCCeE
Q 002591 722 DLICSCDGDG--EIRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAA-EN--VVSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 722 ~ll~sgs~Dg--~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~-dg--~I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
.++++.+.+| .|++||+.+++....... .....+|+|++..++.++. ++ .|+++|+.+++..... .+.....
T Consensus 261 ~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt-~~g~~~~ 339 (433)
T PRK04922 261 RLALTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLT-FQGNYNA 339 (433)
T ss_pred EEEEEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEee-cCCCCcc
Confidence 8887777666 599999998876543322 2356889999998888765 33 4777888777644322 2334455
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCc
Q 002591 795 SVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY---QSLELWNMSENK 867 (903)
Q Consensus 795 sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwdl~~~~ 867 (903)
.++|+|||++|+..+.+ .|.+||+.++.. ..+.. ........|+|+|++|+..+.+ ..|+++++..+.
T Consensus 340 ~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~----~~Lt~-~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~ 414 (433)
T PRK04922 340 RASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSV----RTLTP-GSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRV 414 (433)
T ss_pred CEEECCCCCEEEEEECCCCceeEEEEECCCCCe----EECCC-CCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCc
Confidence 78999999988765432 699999977632 12221 2234567899999998887764 378889997766
Q ss_pred EEEEccCCCCEEEEEEec
Q 002591 868 TMTLTAHEGLIAALAVST 885 (903)
Q Consensus 868 ~~~~~~h~~~V~sl~~sp 885 (903)
...+..+.+.+...+|+|
T Consensus 415 ~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 415 RQRLVSADGEVREPAWSP 432 (433)
T ss_pred eEEcccCCCCCCCCccCC
Confidence 666666777788888876
No 217
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.54 E-value=6.3e-14 Score=149.69 Aligned_cols=194 Identities=22% Similarity=0.269 Sum_probs=139.9
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee
Q 002591 669 TDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 748 (903)
Q Consensus 669 ~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~ 748 (903)
.+++|+.+|..|++++.||++|||+..+ ...+.....|...|.++.|+||+. +|++-+.| ..+||+++++.++....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps-~~t~l~e~~~~~eV~DL~FS~dgk-~lasig~d-~~~VW~~~~g~~~a~~t 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPS-MLTILEEIAHHAEVKDLDFSPDGK-FLASIGAD-SARVWSVNTGAALARKT 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCc-chhhhhhHhhcCccccceeCCCCc-EEEEecCC-ceEEEEeccCchhhhcC
Confidence 7899999999999999999999999876 455666677999999999999987 45577777 99999999985544332
Q ss_pred cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCC---C-EEEEEeC-C-eEEEEECCCCC
Q 002591 749 GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSG---E-LLASVSE-D-SVRVWTVGSGS 822 (903)
Q Consensus 749 ~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg---~-~lasgs~-d-~I~iwdl~s~~ 822 (903)
... ....+..+.|+.|+ . ++++.-. . .|+.||+....
T Consensus 225 ~~~-------------------------------------k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~ 267 (398)
T KOG0771|consen 225 PFS-------------------------------------KDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWS 267 (398)
T ss_pred Ccc-------------------------------------cchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeec
Confidence 100 11122233344333 1 1222111 1 45555543322
Q ss_pred Cc--ceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecCCc
Q 002591 823 EG--ECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHDKF 898 (903)
Q Consensus 823 ~~--~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG~ 898 (903)
.. ............|.+++.+++|++++.|+.||.|-||+..+-+++ ...+|...|+.+.|+||.+++++.+.|..
T Consensus 268 ~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~ 347 (398)
T KOG0771|consen 268 GSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNE 347 (398)
T ss_pred cccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCc
Confidence 11 111222223557999999999999999999999999999998887 44589999999999999999999988887
Q ss_pred EEEc
Q 002591 899 VKLW 902 (903)
Q Consensus 899 I~IW 902 (903)
+.|.
T Consensus 348 ~~v~ 351 (398)
T KOG0771|consen 348 AAVT 351 (398)
T ss_pred eeEE
Confidence 7663
No 218
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.53 E-value=1.4e-11 Score=127.38 Aligned_cols=229 Identities=17% Similarity=0.263 Sum_probs=162.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCC--CeEEEEECCCCCEEE-EEeCC------CcEEEEeCC
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSS--LITDVRFSPSMPRLA-TSSFD------KTVRVWDAD 695 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~--~V~~l~fspdg~~La-sgs~D------g~I~IWDl~ 695 (903)
...+++|+-|...+++|..+| .+||+++..+....-..+.+ .+..+-|- .++|+ +|+.+ ..|.|||-.
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkviIWDD~ 83 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVIIWDDL 83 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceEEEEecc
Confidence 455699999999999997665 89999886544333332322 23333332 23443 33332 469999944
Q ss_pred CCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC-CCeeeEEeec---CceeEEEecCCC-EEEEE--Ec
Q 002591 696 NPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN-NGSCTRVFKG---GTAQMRFQPHLG-RYLAA--AA 768 (903)
Q Consensus 696 ~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~-t~~~~~~~~~---~~~~v~~sp~~~-~ll~~--s~ 768 (903)
. .+++.++. ...+|.++++.++ +++ +. .++.|+||... +.+.++.++. +..-+++.|..+ .+++. -.
T Consensus 84 k-~~~i~el~-f~~~I~~V~l~r~--riV-vv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k 157 (346)
T KOG2111|consen 84 K-ERCIIELS-FNSEIKAVKLRRD--RIV-VV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFK 157 (346)
T ss_pred c-CcEEEEEE-eccceeeEEEcCC--eEE-EE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCc
Confidence 3 66666665 6788999999876 233 33 37899999988 4555665543 223344455443 33332 22
Q ss_pred CCeEEEEECCCCeE--EEEecCCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEeec--CCCceEEEEE
Q 002591 769 ENVVSILDAETQAC--RLSLQGHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGECVHELSC--NGNKFHSCVF 842 (903)
Q Consensus 769 dg~I~i~D~~t~~~--~~~l~~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~~~--~~~~i~si~~ 842 (903)
-|.|.|.|+...+. ...+.+|.+.|.|++.+-+|.+||+++.. -|||||..+++ .+.++.. ....|.+++|
T Consensus 158 ~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~---~l~E~RRG~d~A~iy~iaF 234 (346)
T KOG2111|consen 158 TGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGT---LLQELRRGVDRADIYCIAF 234 (346)
T ss_pred cceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCc---EeeeeecCCchheEEEEEe
Confidence 58999999987765 47788999999999999999999999988 69999999984 4444432 2456999999
Q ss_pred eCCCCEEEEEECCCeEEEEECCC
Q 002591 843 HPTYPSLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 843 sp~g~~l~t~s~dg~I~vwdl~~ 865 (903)
+|+..+|++++..|+|+||.++.
T Consensus 235 Sp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 235 SPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CCCccEEEEEcCCCeEEEEEeec
Confidence 99999999999999999998865
No 219
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.52 E-value=8.3e-13 Score=137.13 Aligned_cols=241 Identities=18% Similarity=0.349 Sum_probs=168.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-Cc----eeEEeccC------------CCCeEEEEECCCCC--EEEE
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDT-LK----SKTNLEEH------------SSLITDVRFSPSMP--RLAT 682 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t-~~----~~~~l~~h------------~~~V~~l~fspdg~--~Las 682 (903)
..+-|.+|.|..+|.+||||..+|.|.+|.-+. .+ ....+..| ...|..|+|.+++. .++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 356799999999999999999999999997442 21 22333333 34689999988765 5777
Q ss_pred EeCCCcEEEEeCCCCCce----------------------------------eEEe-ccCCCceEEEEecCCCCeEEEEE
Q 002591 683 SSFDKTVRVWDADNPGYS----------------------------------LRTF-MGHSASVMSLDFHPNKDDLICSC 727 (903)
Q Consensus 683 gs~Dg~I~IWDl~~~~~~----------------------------------~~~~-~~h~~~V~sl~fsp~~~~ll~sg 727 (903)
...|++|++|.+...+.. .+.+ ..|+-.|.+|.++.|...++ ++
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~l-SA 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFL-SA 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEe-ec
Confidence 778999999988642211 1111 25888899999999987666 54
Q ss_pred eCCCcEEEEEcCCCe-eeEE--ee--------cCceeEEEecCC-CEEEEEEcCCeEEEEECCCCeEE------EE----
Q 002591 728 DGDGEIRYWSINNGS-CTRV--FK--------GGTAQMRFQPHL-GRYLAAAAENVVSILDAETQACR------LS---- 785 (903)
Q Consensus 728 s~Dg~I~iwDi~t~~-~~~~--~~--------~~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~~~------~~---- 785 (903)
+|=.|.+|+++--. +... ++ .-++...|+|.. +.++..++.|+|++.|++...+. ..
T Consensus 183 -DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEeped 261 (433)
T KOG1354|consen 183 -DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPED 261 (433)
T ss_pred -cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccC
Confidence 48899999987432 2221 11 124556788876 56777888999999999843211 11
Q ss_pred ------ecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCC---------------CceEEEEEeC
Q 002591 786 ------LQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNG---------------NKFHSCVFHP 844 (903)
Q Consensus 786 ------l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~---------------~~i~si~~sp 844 (903)
+..-...|..+.|+++|+|+++-..-+|+|||+..... .+..+..|. ..-..|+|+.
T Consensus 262 p~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~--pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg 339 (433)
T KOG1354|consen 262 PSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAK--PVETYPVHEYLRSKLCSLYENDAIFDKFECSWSG 339 (433)
T ss_pred CcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCC--cceEEeehHhHHHHHHHHhhccchhheeEEEEcC
Confidence 11112457889999999999988777999999965432 233322221 1234678999
Q ss_pred CCCEEEEEECCCeEEEEECCCC
Q 002591 845 TYPSLLVIGCYQSLELWNMSEN 866 (903)
Q Consensus 845 ~g~~l~t~s~dg~I~vwdl~~~ 866 (903)
++.++++|+..+.+++|++..|
T Consensus 340 ~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 340 NDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred CcceEecccccceEEEecCCCC
Confidence 9999999999999999996544
No 220
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.52 E-value=8.6e-11 Score=131.78 Aligned_cols=271 Identities=14% Similarity=0.176 Sum_probs=186.7
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeC----CCcEEEEECCCC--c--eeEEeccCCCCeEEEEECCCCCEEEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGH----DKKAVLWHTDTL--K--SKTNLEEHSSLITDVRFSPSMPRLATS 683 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~----Dg~V~vWd~~t~--~--~~~~l~~h~~~V~~l~fspdg~~Lasg 683 (903)
.+..+..+. -......+++++++++|+++.. ++.|..|++... . .+.+.......-..|++++++++|+++
T Consensus 26 ~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~va 104 (345)
T PF10282_consen 26 TLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVA 104 (345)
T ss_dssp EEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEE
T ss_pred CceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEE
Confidence 555555533 3445677999999999999876 468999987753 2 333344345566789999999999999
Q ss_pred eC-CCcEEEEeCCCCCceeEE---ec----------cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe--eeE--
Q 002591 684 SF-DKTVRVWDADNPGYSLRT---FM----------GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS--CTR-- 745 (903)
Q Consensus 684 s~-Dg~I~IWDl~~~~~~~~~---~~----------~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~--~~~-- 745 (903)
.. +|.|.+|++...+..... +. .......++.|+|++++++++.-....|++|++.... ...
T Consensus 105 ny~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~ 184 (345)
T PF10282_consen 105 NYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVD 184 (345)
T ss_dssp ETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEE
T ss_pred EccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEee
Confidence 86 899999999875543332 11 1235578999999999888777667889999998765 322
Q ss_pred Eee----cCceeEEEecCCCEEEEEEc-CCeEEEEECC--CCe--EEEEecCC------CCCeEEEEEcCCCCEEEEEeC
Q 002591 746 VFK----GGTAQMRFQPHLGRYLAAAA-ENVVSILDAE--TQA--CRLSLQGH------TKPIDSVCWDPSGELLASVSE 810 (903)
Q Consensus 746 ~~~----~~~~~v~~sp~~~~ll~~s~-dg~I~i~D~~--t~~--~~~~l~~h------~~~V~sl~~spdg~~lasgs~ 810 (903)
.+. .+...+.|+|+++++++... ++.|.+|++. ++. .+..+... ......|+++|||++|+++..
T Consensus 185 ~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr 264 (345)
T PF10282_consen 185 SIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNR 264 (345)
T ss_dssp EEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEEC
T ss_pred ccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEec
Confidence 222 24577999999998877766 6789999888 443 22222211 125788999999998888776
Q ss_pred C--eEEEEECCC-CCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC-CeEEEEEC--CCCcEEEEc--cCCCCEEEEE
Q 002591 811 D--SVRVWTVGS-GSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY-QSLELWNM--SENKTMTLT--AHEGLIAALA 882 (903)
Q Consensus 811 d--~I~iwdl~s-~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d-g~I~vwdl--~~~~~~~~~--~h~~~V~sl~ 882 (903)
+ .|.+|++.. ......+..+.........++++|+|++|+++..+ +.|.+|++ .+|.+.... ..-....||.
T Consensus 265 ~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~ 344 (345)
T PF10282_consen 265 GSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIV 344 (345)
T ss_dssp TTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEE
T ss_pred cCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEe
Confidence 6 899999943 33455666666656678999999999999998854 68999876 566655332 2344556665
Q ss_pred E
Q 002591 883 V 883 (903)
Q Consensus 883 ~ 883 (903)
|
T Consensus 345 f 345 (345)
T PF10282_consen 345 F 345 (345)
T ss_dssp E
T ss_pred C
Confidence 5
No 221
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.52 E-value=2.3e-14 Score=162.48 Aligned_cols=247 Identities=20% Similarity=0.252 Sum_probs=186.5
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
+-.+....+||.+.|+.++.+.+..++|+++.|..|++|.+.++.++..+.+|++.|++|+|+|-- +.+.||++++
T Consensus 221 t~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~ 296 (1113)
T KOG0644|consen 221 TARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRI 296 (1113)
T ss_pred chhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEe
Confidence 446778899999999999999999999999999999999999999999999999999999999964 7788999999
Q ss_pred EeCC-CCCc-eeEEec-cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCC-CEEEEEE
Q 002591 692 WDAD-NPGY-SLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHL-GRYLAAA 767 (903)
Q Consensus 692 WDl~-~~~~-~~~~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~-~~ll~~s 767 (903)
||.+ .... .-+-+. ....-+.++-|...+..++ |++.|++-..|.+....+....- .-+..+.+. ...+++-
T Consensus 297 wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~-Tgs~d~ea~n~e~~~l~~~~~~l---if~t~ssd~~~~~~~ar 372 (1113)
T KOG0644|consen 297 WDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFL-TGSRDGEARNHEFEQLAWRSNLL---IFVTRSSDLSSIVVTAR 372 (1113)
T ss_pred ccccccccccCCCCCCcccccceeeeeccccccccc-cccCCcccccchhhHhhhhccce---EEEeccccccccceeee
Confidence 9997 1100 000011 1224566677766666554 99999999999876543221110 001111111 4455566
Q ss_pred cCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 768 AENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
.+-.+.+|++.++...+.+.+|...+..+.++|-.. +..+++.| ...|||+-.+...+... .+ ...+....|+++
T Consensus 373 ~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~--~g-h~kl~d~kFSqd 449 (1113)
T KOG0644|consen 373 NDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYF--IG-HGKLVDGKFSQD 449 (1113)
T ss_pred eeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeee--cc-cceeeccccCCC
Confidence 678899999999999999999999999999999655 55567777 99999998774433333 23 567888899999
Q ss_pred CCEEEEEECCCeEEEEECCCCcEE
Q 002591 846 YPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 846 g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
|..++....-|.++|+....++..
T Consensus 450 gts~~lsd~hgql~i~g~gqs~s~ 473 (1113)
T KOG0644|consen 450 GTSIALSDDHGQLYILGTGQSKSQ 473 (1113)
T ss_pred CceEecCCCCCceEEeccCCCccc
Confidence 999999888899999987665543
No 222
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.51 E-value=1.1e-11 Score=143.09 Aligned_cols=203 Identities=16% Similarity=0.209 Sum_probs=146.4
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEe--CCCcEEEEEcCCCeee--EEeecCceeEEEecCCCEE
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD--GDGEIRYWSINNGSCT--RVFKGGTAQMRFQPHLGRY 763 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs--~Dg~I~iwDi~t~~~~--~~~~~~~~~v~~sp~~~~l 763 (903)
.|.+||.+. ...+.+..+...+.+.+|+|+|..++++.. .+..|++||+.+++.. ..+.+......|+|++..+
T Consensus 180 ~l~~~d~dg--~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~L 257 (429)
T PRK03629 180 ELRVSDYDG--YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKL 257 (429)
T ss_pred eEEEEcCCC--CCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEE
Confidence 688888874 234445557778999999999988776543 2457999999988643 3455666778999999988
Q ss_pred EEEEc-CC--eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCc
Q 002591 764 LAAAA-EN--VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 764 l~~s~-dg--~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
+.... ++ .|++||+++++.... ..+...+...+|+|||+.|+..+.+ .|+++|+.++. ...+......
T Consensus 258 a~~~~~~g~~~I~~~d~~tg~~~~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~----~~~lt~~~~~ 332 (429)
T PRK03629 258 AFALSKTGSLNLYVMDLASGQIRQV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA----PQRITWEGSQ 332 (429)
T ss_pred EEEEcCCCCcEEEEEECCCCCEEEc-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC----eEEeecCCCC
Confidence 87643 44 599999998876544 3345567889999999988766653 45555665542 2222233444
Q ss_pred eEEEEEeCCCCEEEEEECC---CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCc
Q 002591 837 FHSCVFHPTYPSLLVIGCY---QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKF 898 (903)
Q Consensus 837 i~si~~sp~g~~l~t~s~d---g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~ 898 (903)
.....|+|+|++|+..+.+ ..|++||+.+++...+... .......|+|||++|+.++.|+.
T Consensus 333 ~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~ 396 (429)
T PRK03629 333 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDT-FLDETPSIAPNGTMVIYSSSQGM 396 (429)
T ss_pred ccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCC-CCCCCceECCCCCEEEEEEcCCC
Confidence 5678899999999887654 3689999998887655432 23457889999999999988875
No 223
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.49 E-value=1.1e-11 Score=142.98 Aligned_cols=233 Identities=17% Similarity=0.151 Sum_probs=157.9
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCC
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD---KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D---g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~ 721 (903)
..|.+||. .+.....+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+ +.. ..+....+.+.+..|+|++.
T Consensus 176 ~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~-g~~-~~l~~~~g~~~~~~~SPDG~ 252 (427)
T PRK02889 176 YQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLAT-GRR-RVVANFKGSNSAPAWSPDGR 252 (427)
T ss_pred cEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCC-CCE-EEeecCCCCccceEECCCCC
Confidence 45777776 455556666788889999999999999887753 3599999987 433 23333445567899999999
Q ss_pred eEEEEEeCCCcEEEEE--cCCCeeeEEee--cCceeEEEecCCCEEEEEEc-CCe--EEEEECCCCeEEEEecCCCCCeE
Q 002591 722 DLICSCDGDGEIRYWS--INNGSCTRVFK--GGTAQMRFQPHLGRYLAAAA-ENV--VSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 722 ~ll~sgs~Dg~I~iwD--i~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~-dg~--I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
.++++.+.+|...||. +..+....... .......|+|++..++.++. ++. |+++++.+++..... .+.....
T Consensus 253 ~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt-~~g~~~~ 331 (427)
T PRK02889 253 TLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVT-FTGSYNT 331 (427)
T ss_pred EEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEe-cCCCCcC
Confidence 8887888888766665 44444332222 23456789999998887665 344 444565555433222 2233345
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCc
Q 002591 795 SVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---SLELWNMSENK 867 (903)
Q Consensus 795 sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---~I~vwdl~~~~ 867 (903)
..+|+|||++|+..+.+ .|++||+.++.. ..+.. ........|+|++++|+.++.++ .+++.++....
T Consensus 332 ~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~----~~lt~-~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~ 406 (427)
T PRK02889 332 SPRISPDGKLLAYISRVGGAFKLYVQDLATGQV----TALTD-TTRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRI 406 (427)
T ss_pred ceEECCCCCEEEEEEccCCcEEEEEEECCCCCe----EEccC-CCCccCceECCCCCEEEEEEecCCCEEEEEEECCCCc
Confidence 67899999988876543 599999987632 12221 22345679999999999888664 57777885544
Q ss_pred EEEEccCCCCEEEEEEecC
Q 002591 868 TMTLTAHEGLIAALAVSTE 886 (903)
Q Consensus 868 ~~~~~~h~~~V~sl~~spd 886 (903)
...+..+.+.+...+|+|-
T Consensus 407 ~~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 407 KQRLSVQGGDVREPSWGPF 425 (427)
T ss_pred eEEeecCCCCCCCCccCCC
Confidence 4456667788888888873
No 224
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.48 E-value=3.5e-12 Score=150.72 Aligned_cols=249 Identities=19% Similarity=0.269 Sum_probs=174.4
Q ss_pred EECCCCceeEEeccCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCC------ceeEEeccCCCceEEEEecCCCCe
Q 002591 650 WHTDTLKSKTNLEEHSSLITDVRFSPSM-PRLATSSFDKTVRVWDADNPG------YSLRTFMGHSASVMSLDFHPNKDD 722 (903)
Q Consensus 650 Wd~~t~~~~~~l~~h~~~V~~l~fspdg-~~Lasgs~Dg~I~IWDl~~~~------~~~~~~~~h~~~V~sl~fsp~~~~ 722 (903)
|+. .|..+..+..|...|..++.++.. .+|++||.||+|++|++..-. .+..++......+.++.+.+.++.
T Consensus 1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 654 578889999999999999998766 899999999999999987411 223344445678899999888775
Q ss_pred EEEEEeCCCcEEEEEcCCCe-------eeEEee----cCceeE-EEecC-CC-EEEEEEcCCeEEEEECCCCeEEEEecC
Q 002591 723 LICSCDGDGEIRYWSINNGS-------CTRVFK----GGTAQM-RFQPH-LG-RYLAAAAENVVSILDAETQACRLSLQG 788 (903)
Q Consensus 723 ll~sgs~Dg~I~iwDi~t~~-------~~~~~~----~~~~~v-~~sp~-~~-~ll~~s~dg~I~i~D~~t~~~~~~l~~ 788 (903)
+. .++.||.|++.+++... +.+..+ +.+..+ ++... .. .++++...+.|..||+++......++.
T Consensus 1113 ~A-v~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1113 FA-VSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred EE-EEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence 55 67999999999987622 111111 111111 12222 23 567777789999999998876665543
Q ss_pred --CCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEe-ecCCCceEEEEEeCCCC---EEEEEE--CCCeEE
Q 002591 789 --HTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHEL-SCNGNKFHSCVFHPTYP---SLLVIG--CYQSLE 859 (903)
Q Consensus 789 --h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~-~~~~~~i~si~~sp~g~---~l~t~s--~dg~I~ 859 (903)
..+.|++++.+|.+.++++|+.. .+.+||++-+ ..+..+ ..+...+..+..+|-.+ ..++++ ..+.|.
T Consensus 1192 ~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~---~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs 1268 (1431)
T KOG1240|consen 1192 QLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFR---VPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVS 1268 (1431)
T ss_pred CccccceeEEEecCCceEEEEecCCceEEEEEeecC---ceeecccCcccCCcceEEeeccCCCCceEEEecccCCCcee
Confidence 45789999999999999999888 9999999865 233222 23346777777776543 444444 457999
Q ss_pred EEECCCCcEE-EEccC-------------------CCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 860 LWNMSENKTM-TLTAH-------------------EGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 860 vwdl~~~~~~-~~~~h-------------------~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+|++.++.+. .+... .-....+++..-+.++++|+.|..|+.||
T Consensus 1269 ~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD 1332 (1431)
T KOG1240|consen 1269 TWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWD 1332 (1431)
T ss_pred eeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeecc
Confidence 9999988654 22111 11223344455567899999999999998
No 225
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.48 E-value=6.3e-11 Score=133.12 Aligned_cols=253 Identities=16% Similarity=0.173 Sum_probs=167.4
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC-CCcEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF-DKTVR 690 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~-Dg~I~ 690 (903)
+.+.+..+......-..+.|++||+++++++.||.|.++|+.+.+.+.+++.... ..++++++||+++++++. ++.|.
T Consensus 25 t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~ 103 (369)
T PF02239_consen 25 TNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVS 103 (369)
T ss_dssp T-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEE
T ss_pred CCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCcee
Confidence 6677888886655555678999999999999999999999999999999976554 688999999999988864 89999
Q ss_pred EEeCCCCCceeEEecc-------CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee--EEeec--CceeEEEecC
Q 002591 691 VWDADNPGYSLRTFMG-------HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT--RVFKG--GTAQMRFQPH 759 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~-------h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~--~~~~~--~~~~v~~sp~ 759 (903)
|+|.++ .+.++.+.. ....+..|..++....++++--+.+.|.+.|....+.+ ..++. ......|+|+
T Consensus 104 v~D~~t-le~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpd 182 (369)
T PF02239_consen 104 VIDAET-LEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPD 182 (369)
T ss_dssp EEETTT---EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TT
T ss_pred Eecccc-ccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcc
Confidence 999988 556665542 23467778778887766656555688888887765433 23322 3456778888
Q ss_pred CCEEEEEEc-CCeEEEEECCCCeEEEEec---------------------------------------------------
Q 002591 760 LGRYLAAAA-ENVVSILDAETQACRLSLQ--------------------------------------------------- 787 (903)
Q Consensus 760 ~~~ll~~s~-dg~I~i~D~~t~~~~~~l~--------------------------------------------------- 787 (903)
+.+++++.. ++.|.++|.++++.+..+.
T Consensus 183 gry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv 262 (369)
T PF02239_consen 183 GRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVV 262 (369)
T ss_dssp SSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEE
T ss_pred cceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEE
Confidence 888777543 5678888877765554321
Q ss_pred ----CCCCCeEEEEEcCCCCEEEEE---eCC--eEEEEECCCCCCcceEEEeec-CCCceEEEEEeCCCCEEEEEECCC-
Q 002591 788 ----GHTKPIDSVCWDPSGELLASV---SED--SVRVWTVGSGSEGECVHELSC-NGNKFHSCVFHPTYPSLLVIGCYQ- 856 (903)
Q Consensus 788 ----~h~~~V~sl~~spdg~~lasg---s~d--~I~iwdl~s~~~~~~i~~~~~-~~~~i~si~~sp~g~~l~t~s~dg- 856 (903)
....+ ..+..+|+++++.+. +.+ .|.++|..+. +.+..+.. ....+..+.|+++|+++.++..++
T Consensus 263 ~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl---~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~ 338 (369)
T PF02239_consen 263 KTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTL---KVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGN 338 (369)
T ss_dssp EEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGT---EEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--T
T ss_pred EEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCc---ceeEEEeccCCCcEeccEECCCCCEEEEEEecCC
Confidence 11111 335678999998888 444 8999999876 44444432 233588999999999988776653
Q ss_pred -eEEEEECCCCcEEE
Q 002591 857 -SLELWNMSENKTMT 870 (903)
Q Consensus 857 -~I~vwdl~~~~~~~ 870 (903)
.|.+||..+.+++.
T Consensus 339 ~~i~v~D~~Tl~~~~ 353 (369)
T PF02239_consen 339 GAIVVYDAKTLKEKK 353 (369)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CEEEEEECCCcEEEE
Confidence 69999999999883
No 226
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.47 E-value=2.3e-10 Score=128.38 Aligned_cols=266 Identities=16% Similarity=0.167 Sum_probs=179.3
Q ss_pred EEEEeCC----CcEEEEEC--CCCceeEEe-ccCCCCeEEEEECCCCCEEEEEeC----CCcEEEEeCCCC-Cc--eeEE
Q 002591 638 LATGGHD----KKAVLWHT--DTLKSKTNL-EEHSSLITDVRFSPSMPRLATSSF----DKTVRVWDADNP-GY--SLRT 703 (903)
Q Consensus 638 Latgs~D----g~V~vWd~--~t~~~~~~l-~~h~~~V~~l~fspdg~~Lasgs~----Dg~I~IWDl~~~-~~--~~~~ 703 (903)
+++|+++ +.|.+|++ ++++....- .........|++++++++|+++.. ++.|..|++... +. .+..
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~ 81 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS 81 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence 5566666 68999888 344432221 123455678999999999999877 578999998864 22 2223
Q ss_pred eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC-CeeeEE---e-------------ecCceeEEEecCCCEEEEE
Q 002591 704 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN-GSCTRV---F-------------KGGTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 704 ~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t-~~~~~~---~-------------~~~~~~v~~sp~~~~ll~~ 766 (903)
..........++++|+++.++++...+|.|.++++.. +..... + ..+...+.++|++++++++
T Consensus 82 ~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~ 161 (345)
T PF10282_consen 82 VPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVP 161 (345)
T ss_dssp EEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEE
T ss_pred eccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEE
Confidence 3323445567999999998888878899999999987 443322 2 1245678999999998887
Q ss_pred Ec-CCeEEEEECCCCe--E--EEEec-CCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCC-CCcceEEEeecC----
Q 002591 767 AA-ENVVSILDAETQA--C--RLSLQ-GHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSG-SEGECVHELSCN---- 833 (903)
Q Consensus 767 s~-dg~I~i~D~~t~~--~--~~~l~-~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~-~~~~~i~~~~~~---- 833 (903)
.. .+.|.+|++.... . ...+. .....-+.++|+|+++++++.++. .|.+|++... .....+..+...
T Consensus 162 dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~ 241 (345)
T PF10282_consen 162 DLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGF 241 (345)
T ss_dssp ETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTS
T ss_pred ecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccc
Confidence 65 4689999987654 3 22222 234557889999999988777765 8999998822 122233332221
Q ss_pred --CCceEEEEEeCCCCEEEEEECC-CeEEEEECC--CCcEE---EEccCCCCEEEEEEecCCCEEEEEe-cCCcEEEcC
Q 002591 834 --GNKFHSCVFHPTYPSLLVIGCY-QSLELWNMS--ENKTM---TLTAHEGLIAALAVSTETGYVASAS-HDKFVKLWK 903 (903)
Q Consensus 834 --~~~i~si~~sp~g~~l~t~s~d-g~I~vwdl~--~~~~~---~~~~h~~~V~sl~~spdg~~LaSgs-~DG~I~IWd 903 (903)
......++++|+|++|+++... +.|.+|++. ++++. .+.......+.++++|+|++|++++ .++.|.+|+
T Consensus 242 ~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~ 320 (345)
T PF10282_consen 242 TGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFD 320 (345)
T ss_dssp CSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEE
T ss_pred cccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEE
Confidence 1257889999999999988754 689999993 34443 3333455689999999999998887 566888874
No 227
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=1.1e-11 Score=143.43 Aligned_cols=220 Identities=18% Similarity=0.242 Sum_probs=152.3
Q ss_pred eeEeecCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEE-EeCCC--cE
Q 002591 616 ANSVRASTSKVICCHFSSDGKLLATGGHD---KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT-SSFDK--TV 689 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~~Latgs~D---g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Las-gs~Dg--~I 689 (903)
...+..|...|.+.+|+|||+.|+..+.+ ..|++||+.+++.. .+..+.+.+.+++|+|||+.|+. .+.+| .|
T Consensus 196 ~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~I 274 (433)
T PRK04922 196 PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLALTLSRDGNPEI 274 (433)
T ss_pred ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEEEEEeCCCCceE
Confidence 34556678889999999999999987744 36999999877653 33444555668999999997754 45555 59
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCc--EEEEEcCCCeeeEEe-ec-CceeEEEecCCCEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE--IRYWSINNGSCTRVF-KG-GTAQMRFQPHLGRYLA 765 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~--I~iwDi~t~~~~~~~-~~-~~~~v~~sp~~~~ll~ 765 (903)
++||+.+ +. ++.+..+......++|+|++..++++...+|. |+++|+.+++..+.. .+ ......|+|+++.++.
T Consensus 275 y~~d~~~-g~-~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~ 352 (433)
T PRK04922 275 YVMDLGS-RQ-LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAM 352 (433)
T ss_pred EEEECCC-CC-eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEE
Confidence 9999986 33 45566666666789999999988877666665 666777776654432 22 2345799999999888
Q ss_pred EEcCC---eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 766 AAAEN---VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 766 ~s~dg---~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
...++ .|.+||+.+++.. .+. +......+.|+|||++|+..+.+ .|.++++... ....+..+...+.
T Consensus 353 ~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~----~~~~l~~~~g~~~ 426 (433)
T PRK04922 353 VHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGR----VRQRLVSADGEVR 426 (433)
T ss_pred EECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC----ceEEcccCCCCCC
Confidence 76543 6999999888765 333 33345577999999977766543 5778887432 2333333344555
Q ss_pred EEEEeC
Q 002591 839 SCVFHP 844 (903)
Q Consensus 839 si~~sp 844 (903)
..+|+|
T Consensus 427 ~p~wsp 432 (433)
T PRK04922 427 EPAWSP 432 (433)
T ss_pred CCccCC
Confidence 666665
No 228
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=6.1e-12 Score=145.19 Aligned_cols=221 Identities=19% Similarity=0.250 Sum_probs=151.2
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEE-EEeCCCcEEEE
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHD---KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLA-TSSFDKTVRVW 692 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~D---g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~La-sgs~Dg~I~IW 692 (903)
..+..+...|.+.+|+|||+.|+..+.+ ..|++||+.+++... +....+.+.+.+|+|||+.|+ +.+.+|...||
T Consensus 189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy 267 (427)
T PRK02889 189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIY 267 (427)
T ss_pred eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEE
Confidence 3455678889999999999999887753 359999998876543 444445677899999999886 45778887777
Q ss_pred eCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEc--CCCeeeEE-eec-CceeEEEecCCCEEEEEEc
Q 002591 693 DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSI--NNGSCTRV-FKG-GTAQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 693 Dl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi--~t~~~~~~-~~~-~~~~v~~sp~~~~ll~~s~ 768 (903)
.++..+...+.+..+...+....|+|++..+++++..+|...||.+ .+++..+. +.+ ......|+|+++.++.++.
T Consensus 268 ~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~ 347 (427)
T PRK02889 268 TVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISR 347 (427)
T ss_pred EEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEc
Confidence 6543334456666666667788999999988877666677666655 44443332 222 2345789999999988776
Q ss_pred CC---eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEE
Q 002591 769 EN---VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCV 841 (903)
Q Consensus 769 dg---~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~ 841 (903)
++ .|.+||+.+++...... ......+.|+|||++|+..+.+ .+.+.++. + .....+..+.+.+...+
T Consensus 348 ~~g~~~I~v~d~~~g~~~~lt~--~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g---~~~~~l~~~~g~~~~p~ 421 (427)
T PRK02889 348 VGGAFKLYVQDLATGQVTALTD--TTRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-G---RIKQRLSVQGGDVREPS 421 (427)
T ss_pred cCCcEEEEEEECCCCCeEEccC--CCCccCceECCCCCEEEEEEecCCCEEEEEEECC-C---CceEEeecCCCCCCCCc
Confidence 54 69999999887554332 2344678999999987776644 35565653 2 22333333445566667
Q ss_pred EeC
Q 002591 842 FHP 844 (903)
Q Consensus 842 ~sp 844 (903)
|+|
T Consensus 422 wsp 424 (427)
T PRK02889 422 WGP 424 (427)
T ss_pred cCC
Confidence 765
No 229
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.46 E-value=1.9e-11 Score=126.39 Aligned_cols=229 Identities=13% Similarity=0.202 Sum_probs=164.7
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce-eEEeccCCCceEEEEecCCCCeEEEEEeCC------CcEEEEEcC
Q 002591 667 LITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCDGD------GEIRYWSIN 739 (903)
Q Consensus 667 ~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~-~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D------g~I~iwDi~ 739 (903)
....++|+-|...+++|..+| .+||+++--++. .+.+....-.+..+-|- .+.+.++|+.+ ..|.|||-.
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLfR--~N~laLVGGg~~pky~pNkviIWDD~ 83 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLFR--SNYLALVGGGSRPKYPPNKVIIWDDL 83 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhhh--hceEEEecCCCCCCCCCceEEEEecc
Confidence 355699999999999998777 899999752221 12222222334444443 34455566544 579999977
Q ss_pred CCeeeEEe--ecCceeEEEecCCCEEEEEEcCCeEEEEECC-CCeEEEEecCC--CCCeEEEEEcCCCCEEEEEeCC--e
Q 002591 740 NGSCTRVF--KGGTAQMRFQPHLGRYLAAAAENVVSILDAE-TQACRLSLQGH--TKPIDSVCWDPSGELLASVSED--S 812 (903)
Q Consensus 740 t~~~~~~~--~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~-t~~~~~~l~~h--~~~V~sl~~spdg~~lasgs~d--~ 812 (903)
..+++..+ ...+..+++.++ .++...++.|+||... ..+.++.+..- ...+.+++-..+..+||.-+.. .
T Consensus 84 k~~~i~el~f~~~I~~V~l~r~---riVvvl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~Gq 160 (346)
T KOG2111|consen 84 KERCIIELSFNSEIKAVKLRRD---RIVVVLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQ 160 (346)
T ss_pred cCcEEEEEEeccceeeEEEcCC---eEEEEecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccce
Confidence 77777654 467777887765 4555678899999887 44666555532 3334444433344477766655 8
Q ss_pred EEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC-eEEEEECCCCcEE-EEc--cCCCCEEEEEEecCCC
Q 002591 813 VRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ-SLELWNMSENKTM-TLT--AHEGLIAALAVSTETG 888 (903)
Q Consensus 813 I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg-~I~vwdl~~~~~~-~~~--~h~~~V~sl~~spdg~ 888 (903)
|.|-|+...... .-..+..|...|.+++.+-+|..+++++..| -|+|||..+|+.+ ++. .....|.+++|+|+..
T Consensus 161 vQi~dL~~~~~~-~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s 239 (346)
T KOG2111|consen 161 VQIVDLASTKPN-APSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSS 239 (346)
T ss_pred EEEEEhhhcCcC-CceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCcc
Confidence 999999865332 3466788999999999999999999999999 5899999999988 443 3456899999999999
Q ss_pred EEEEEecCCcEEEc
Q 002591 889 YVASASHDKFVKLW 902 (903)
Q Consensus 889 ~LaSgs~DG~I~IW 902 (903)
+||++|+.|+|+||
T Consensus 240 ~LavsSdKgTlHiF 253 (346)
T KOG2111|consen 240 WLAVSSDKGTLHIF 253 (346)
T ss_pred EEEEEcCCCeEEEE
Confidence 99999999999997
No 230
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.46 E-value=5.6e-13 Score=144.04 Aligned_cols=249 Identities=20% Similarity=0.279 Sum_probs=190.0
Q ss_pred CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCC-CCeEEEEEeCCCcE
Q 002591 655 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN-KDDLICSCDGDGEI 733 (903)
Q Consensus 655 ~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~-~~~ll~sgs~Dg~I 733 (903)
......|..|.+.|..|.|+..|..|++|+.|..|.+||.......+....+|...|.-..|.|. +..-+++++.||.|
T Consensus 132 ~~l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv 211 (559)
T KOG1334|consen 132 LRLQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQV 211 (559)
T ss_pred hhhhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCce
Confidence 34556788999999999999999999999999999999999866667777899999998889886 34456799999999
Q ss_pred EEEEcCCCe------eeEEeecCceeEEEecCC-CEEEEEEcCCeEEEEECCCCeEEEEe---cCCCC---CeEEEEEcC
Q 002591 734 RYWSINNGS------CTRVFKGGTAQMRFQPHL-GRYLAAAAENVVSILDAETQACRLSL---QGHTK---PIDSVCWDP 800 (903)
Q Consensus 734 ~iwDi~t~~------~~~~~~~~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~~~~~l---~~h~~---~V~sl~~sp 800 (903)
++=.+.... ++....+++..++..|.. ..|++++.|+.+.-+|++.......+ +.+.. ....|+.+|
T Consensus 212 r~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P 291 (559)
T KOG1334|consen 212 RVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDP 291 (559)
T ss_pred eeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCC
Confidence 998765332 334456788888888887 45788889999999999987543332 23333 467889999
Q ss_pred CCC-EEEEEeCC-eEEEEECCCCCCc---ceEEEe------ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc--
Q 002591 801 SGE-LLASVSED-SVRVWTVGSGSEG---ECVHEL------SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK-- 867 (903)
Q Consensus 801 dg~-~lasgs~d-~I~iwdl~s~~~~---~~i~~~------~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~-- 867 (903)
... .+++++.| .+++||.+...+. ..+..+ ......|++++|+.++.-|++.-.|..|++|.-.-+.
T Consensus 292 ~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~ 371 (559)
T KOG1334|consen 292 RNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGS 371 (559)
T ss_pred CCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCC
Confidence 665 88888888 9999999865321 111111 1234568999999999889999999999999543221
Q ss_pred ----------EE--EEccCCC--CEEEEEE-ecCCCEEEEEecCCcEEEcC
Q 002591 868 ----------TM--TLTAHEG--LIAALAV-STETGYVASASHDKFVKLWK 903 (903)
Q Consensus 868 ----------~~--~~~~h~~--~V~sl~~-spdg~~LaSgs~DG~I~IWd 903 (903)
.+ .+++|.. .|.++-| -|...|+++||+-|.|.|||
T Consensus 372 ~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~ 422 (559)
T KOG1334|consen 372 EPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWD 422 (559)
T ss_pred CCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEe
Confidence 11 3667754 4777755 57889999999999999997
No 231
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.46 E-value=4.9e-12 Score=133.88 Aligned_cols=235 Identities=16% Similarity=0.176 Sum_probs=178.1
Q ss_pred CCCCeEEEEECCCCC--EEEEEeCCCcEEEEeCCCCCce-----eEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEE
Q 002591 664 HSSLITDVRFSPSMP--RLATSSFDKTVRVWDADNPGYS-----LRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYW 736 (903)
Q Consensus 664 h~~~V~~l~fspdg~--~Lasgs~Dg~I~IWDl~~~~~~-----~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iw 736 (903)
....|..++|.-++. .|+.++.|..+.++++...... +.........|..++... . .|++|-.+|.+.+|
T Consensus 54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~d--g-~Litc~~sG~l~~~ 130 (412)
T KOG3881|consen 54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLAD--G-TLITCVSSGNLQVR 130 (412)
T ss_pred hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcC--C-EEEEEecCCcEEEE
Confidence 445677888876654 4555546777777777653221 123445567777777652 2 45589999999999
Q ss_pred EcCCCe-----eeEEee-cCceeEEEecCCCEEEE-EEcC--CeEEEEECCCCeEEEEecCC---------CCCeEEEEE
Q 002591 737 SINNGS-----CTRVFK-GGTAQMRFQPHLGRYLA-AAAE--NVVSILDAETQACRLSLQGH---------TKPIDSVCW 798 (903)
Q Consensus 737 Di~t~~-----~~~~~~-~~~~~v~~sp~~~~ll~-~s~d--g~I~i~D~~t~~~~~~l~~h---------~~~V~sl~~ 798 (903)
.++.+. .+..-. .+...+.-++....|++ |+.+ +.+.|||++..+.+..-+.- .-+++++.|
T Consensus 131 ~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~F 210 (412)
T KOG3881|consen 131 HDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRF 210 (412)
T ss_pred eccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeecccee
Confidence 998432 222222 34555666666666666 6667 78999999998776654432 235778899
Q ss_pred cCC--CCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--EEcc
Q 002591 799 DPS--GELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM--TLTA 873 (903)
Q Consensus 799 spd--g~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~--~~~~ 873 (903)
.+. ...|++++.- .|++||.+.+. +.+..+...++.++++...|++++|+++...+.+..||++.++.. .+.+
T Consensus 211 l~g~~~~~fat~T~~hqvR~YDt~~qR--RPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg 288 (412)
T KOG3881|consen 211 LEGSPNYKFATITRYHQVRLYDTRHQR--RPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKG 288 (412)
T ss_pred cCCCCCceEEEEecceeEEEecCcccC--cceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCC
Confidence 987 6788888877 99999998653 566677777899999999999999999999999999999999988 4788
Q ss_pred CCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 874 HEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 874 h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
..+.|++|..+|...+|++|+-|..|||+|
T Consensus 289 ~tGsirsih~hp~~~~las~GLDRyvRIhD 318 (412)
T KOG3881|consen 289 ITGSIRSIHCHPTHPVLASCGLDRYVRIHD 318 (412)
T ss_pred ccCCcceEEEcCCCceEEeeccceeEEEee
Confidence 999999999999999999999999999997
No 232
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.46 E-value=5.2e-12 Score=138.86 Aligned_cols=237 Identities=17% Similarity=0.217 Sum_probs=171.3
Q ss_pred cCCCCeEEEEECCCCCEE-EEEeCCCcEEEEeCCCCCceeEEeccCC-CceEEEEecCCCCeEEEEEeCCCcEEEEEcCC
Q 002591 663 EHSSLITDVRFSPSMPRL-ATSSFDKTVRVWDADNPGYSLRTFMGHS-ASVMSLDFHPNKDDLICSCDGDGEIRYWSINN 740 (903)
Q Consensus 663 ~h~~~V~~l~fspdg~~L-asgs~Dg~I~IWDl~~~~~~~~~~~~h~-~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t 740 (903)
.|....+.|..+|||.|| ++|.+--.|++||+.+- ...|..|. ..|..+....+.-.-+|.-..|.+|.+..--.
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL---SLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G 125 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANL---SLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYG 125 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccc---eeeeeecccccceeEEEeccchhhheEeecCceeeehhhcC
Confidence 477888999999999975 66667889999999862 22333332 33333333222111122334477776654332
Q ss_pred CeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECC
Q 002591 741 GSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVG 819 (903)
Q Consensus 741 ~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~ 819 (903)
......+......++++.....+++++....|+-++++.|..+..+....+.+++|..++...+|++|+.+ .|..||.+
T Consensus 126 ~hy~~RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR 205 (703)
T KOG2321|consen 126 RHYRTRIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR 205 (703)
T ss_pred eeeeeecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecch
Confidence 22223334445667777777778888888999999999999999998888999999999999999999988 99999999
Q ss_pred CCCCcceEEE---eecCCC-----ceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCC--CEEEEEEecC--C
Q 002591 820 SGSEGECVHE---LSCNGN-----KFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEG--LIAALAVSTE--T 887 (903)
Q Consensus 820 s~~~~~~i~~---~~~~~~-----~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~--~V~sl~~spd--g 887 (903)
+......+.. +..+.+ .|+++.|+.+|-.+++|+.+|.|.|||++..+.+.+..|.. +|..+.|.+. .
T Consensus 206 ~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q 285 (703)
T KOG2321|consen 206 DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQ 285 (703)
T ss_pred hhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCC
Confidence 8754333322 122222 38999999999999999999999999999999998877754 7888899665 3
Q ss_pred CEEEEEecCCcEEEcC
Q 002591 888 GYVASASHDKFVKLWK 903 (903)
Q Consensus 888 ~~LaSgs~DG~I~IWd 903 (903)
..|+|. +...++|||
T Consensus 286 ~~v~S~-Dk~~~kiWd 300 (703)
T KOG2321|consen 286 NKVVSM-DKRILKIWD 300 (703)
T ss_pred ceEEec-chHHhhhcc
Confidence 455554 456789996
No 233
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.44 E-value=6.8e-11 Score=128.96 Aligned_cols=272 Identities=16% Similarity=0.216 Sum_probs=194.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC---------------cEEEEECCCCceeEEeccCCCC--eE-EEEECCCCCEEEEEe
Q 002591 623 TSKVICCHFSSDGKLLATGGHDK---------------KAVLWHTDTLKSKTNLEEHSSL--IT-DVRFSPSMPRLATSS 684 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg---------------~V~vWd~~t~~~~~~l~~h~~~--V~-~l~fspdg~~Lasgs 684 (903)
...|..+.|+|.++||.+-+... .++|||+.++..+..+..-..+ .+ -+.|+-+.+++|--
T Consensus 71 ~~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv- 149 (561)
T COG5354 71 HPDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV- 149 (561)
T ss_pred cCCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-
Confidence 34599999999999999966433 4999999999999999877666 66 78899888876554
Q ss_pred CCCcEEEEeCCCCCceeEEeccC-CCceEEEEecCCCCe-EEEE-----EeCCCcEEEEEcCCCeeeEE---eecCceeE
Q 002591 685 FDKTVRVWDADNPGYSLRTFMGH-SASVMSLDFHPNKDD-LICS-----CDGDGEIRYWSINNGSCTRV---FKGGTAQM 754 (903)
Q Consensus 685 ~Dg~I~IWDl~~~~~~~~~~~~h-~~~V~sl~fsp~~~~-ll~s-----gs~Dg~I~iwDi~t~~~~~~---~~~~~~~v 754 (903)
....+.|+++ ++......+..- ...|....|+|.+++ .||. ...++.++||.+..++.+.. ++.....+
T Consensus 150 v~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qL 228 (561)
T COG5354 150 VGSSLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQL 228 (561)
T ss_pred ccCeEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEE
Confidence 2445999997 322222112111 356888889987432 2232 45688999999987765543 34556678
Q ss_pred EEecCCCEEEEEEc-----------CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEe--CC-eEEEEECCC
Q 002591 755 RFQPHLGRYLAAAA-----------ENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVS--ED-SVRVWTVGS 820 (903)
Q Consensus 755 ~~sp~~~~ll~~s~-----------dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs--~d-~I~iwdl~s 820 (903)
.|.+.+.++++-.. +..++|+++....+.... .-.++|...+|.|.++.+++.+ .. .+.++|++.
T Consensus 229 kW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~ 307 (561)
T COG5354 229 KWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRG 307 (561)
T ss_pred EEecCCceEEEEEEEeeecccceeccceEEEEeecccccceec-cccccceeeeecccCCceeEEecccccceeeccccc
Confidence 89999987766422 357889998866555444 5679999999999988666554 44 899999975
Q ss_pred CCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEe---
Q 002591 821 GSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY---QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASAS--- 894 (903)
Q Consensus 821 ~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs--- 894 (903)
. ....+ ....-..+.|+|.++++++++.+ |.|.+||......+.-.-......-+.|+||+.++.+..
T Consensus 308 N----l~~~~--Pe~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~n~s~~~wspd~qF~~~~~ts~ 381 (561)
T COG5354 308 N----LRFYF--PEQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGLNTSYCDWSPDGQFYDTDTTSE 381 (561)
T ss_pred c----eEEec--CCcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecCCceEeeccCCceEEEecCCCc
Confidence 3 22222 24455677899999999999887 589999988776653222333455678999999887764
Q ss_pred ---cCCcEEEcC
Q 002591 895 ---HDKFVKLWK 903 (903)
Q Consensus 895 ---~DG~I~IWd 903 (903)
.|..|+||+
T Consensus 382 k~~~Dn~i~l~~ 393 (561)
T COG5354 382 KLRVDNSIKLWD 393 (561)
T ss_pred ccccCcceEEEE
Confidence 477899986
No 234
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.44 E-value=5.4e-12 Score=131.37 Aligned_cols=249 Identities=17% Similarity=0.279 Sum_probs=189.8
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC-CCCceeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~-~t~~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I 689 (903)
.+..+..++||.+.|++...-|...-+++.+.|.+|+||-- +.++.-..+. .-..+++++.+.++...|++|-..|++
T Consensus 13 kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtv 92 (404)
T KOG1409|consen 13 KPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTV 92 (404)
T ss_pred chhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceE
Confidence 55567789999999999999998888999999999999963 3454444443 345789999999999999999999999
Q ss_pred EEEeCCCC---CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEE
Q 002591 690 RVWDADNP---GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYL 764 (903)
Q Consensus 690 ~IWDl~~~---~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll 764 (903)
.-+.+... ....+.+..|...|..+-|+.... .+++++.|..+.---.+.+..+..+. .......+.-. +.+
T Consensus 93 tefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e-~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~f 169 (404)
T KOG1409|consen 93 TEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHE-WVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDAL--YAF 169 (404)
T ss_pred EEEEhhhhhhhcchhhhhhhhhcceeeEEecCCce-eEEEeccccceEEEeeccCCcccceEeeccCCCCceeeE--EEE
Confidence 99977542 334567778999999999987654 55588888777655555555443322 22222222221 455
Q ss_pred EEEcCCeEEEE--ECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEE
Q 002591 765 AAAAENVVSIL--DAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCV 841 (903)
Q Consensus 765 ~~s~dg~I~i~--D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~ 841 (903)
++...|.|.+. +...-..+.++.+|...+.+++|.+...++++|..| .+.+||+.-. .....++.+|...|..+.
T Consensus 170 vGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~--~g~~~el~gh~~kV~~l~ 247 (404)
T KOG1409|consen 170 VGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGR--KGTAYELQGHNDKVQALS 247 (404)
T ss_pred ecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCC--cceeeeeccchhhhhhhh
Confidence 55556666554 344557888999999999999999999999999999 9999999654 245667778888888888
Q ss_pred EeCCCCEEEEEECCCeEEEEECCC
Q 002591 842 FHPTYPSLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 842 ~sp~g~~l~t~s~dg~I~vwdl~~ 865 (903)
.-+--+.+++++.||.|.+|+++.
T Consensus 248 ~~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 248 YAQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred hhhhheeeeeccCCCeEEEEeccc
Confidence 888888999999999999999975
No 235
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.43 E-value=1.8e-11 Score=133.84 Aligned_cols=167 Identities=15% Similarity=0.244 Sum_probs=129.3
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEec----cCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCC---------
Q 002591 633 SDGKLLATGGHDKKAVLWHTDTLKSKTNLE----EHSSLITDVRFSPSMP-RLATSSFDKTVRVWDADNPG--------- 698 (903)
Q Consensus 633 pdg~~Latgs~Dg~V~vWd~~t~~~~~~l~----~h~~~V~~l~fspdg~-~Lasgs~Dg~I~IWDl~~~~--------- 698 (903)
+++--|+.|-..|.|.+.|....+..+.+. -....|+||.|-|.+. .++++-.+|.+++||.....
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~ 262 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQA 262 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccc
Confidence 455567778888889988865422222111 2347899999998765 55666679999999764210
Q ss_pred ------------------ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE---EeecCceeEEEe
Q 002591 699 ------------------YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR---VFKGGTAQMRFQ 757 (903)
Q Consensus 699 ------------------~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~---~~~~~~~~v~~s 757 (903)
.++..+.-..+.|..++|+||+. +||+.+.||.+||||..+.+++. .+-++..+++|+
T Consensus 263 ~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~-~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWS 341 (636)
T KOG2394|consen 263 LKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGK-YLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWS 341 (636)
T ss_pred cCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCc-eEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEc
Confidence 01122222345789999999877 55689999999999999887654 456789999999
Q ss_pred cCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcC
Q 002591 758 PHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDP 800 (903)
Q Consensus 758 p~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~sp 800 (903)
||+++|++++.|..|.||.+...+.+..-.+|+++|..|+|+|
T Consensus 342 PDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 342 PDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred CCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 9999999999999999999999999999999999999999997
No 236
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.43 E-value=4.7e-11 Score=137.73 Aligned_cols=230 Identities=20% Similarity=0.230 Sum_probs=158.2
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCC
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD---KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D---g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~ 721 (903)
..|.++|.+. ...+.+..+...+...+|+|||++|+.++.+ ..|++||+.+ +.. ..+..+...+.+++|+|++.
T Consensus 170 ~~l~~~d~~g-~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~-g~~-~~~~~~~~~~~~~~~spDg~ 246 (417)
T TIGR02800 170 YELQVADYDG-ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLAT-GQR-EKVASFPGMNGAPAFSPDGS 246 (417)
T ss_pred ceEEEEcCCC-CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCC-CCE-EEeecCCCCccceEECCCCC
Confidence 4578888753 4455566677789999999999999888754 4799999987 332 33344556677899999999
Q ss_pred eEEEEEeCCC--cEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcC-C--eEEEEECCCCeEEEEecCCCCCeE
Q 002591 722 DLICSCDGDG--EIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAE-N--VVSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 722 ~ll~sgs~Dg--~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~d-g--~I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
.++++.+.++ .|++||+.++....... .......|++++..++.++.. + .|+++|+.+++.. .+..+...+.
T Consensus 247 ~l~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~ 325 (417)
T TIGR02800 247 KLAVSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNA 325 (417)
T ss_pred EEEEEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCcc
Confidence 8887776655 58889998876544332 223457899999988877653 2 6888898877644 3333556677
Q ss_pred EEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCc
Q 002591 795 SVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---SLELWNMSENK 867 (903)
Q Consensus 795 sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---~I~vwdl~~~~ 867 (903)
.+.|+|+|++|+.++.+ .|.+||+.++.. ..+.. ........|+|++++|+..+.++ .+++++.....
T Consensus 326 ~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~----~~l~~-~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~g~~ 400 (417)
T TIGR02800 326 SPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE----RVLTD-TGLDESPSFAPNGRMILYATTRGGRGVLGLVSTDGRF 400 (417)
T ss_pred CeEECCCCCEEEEEEccCCceEEEEEeCCCCCe----EEccC-CCCCCCceECCCCCEEEEEEeCCCcEEEEEEECCCce
Confidence 88999999988777654 688899876421 12221 12234568999999998887764 56677765554
Q ss_pred EEEEccCCCCEEEEEE
Q 002591 868 TMTLTAHEGLIAALAV 883 (903)
Q Consensus 868 ~~~~~~h~~~V~sl~~ 883 (903)
...+..+.+.+..++|
T Consensus 401 ~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 401 RARLPLGNGDVREPAW 416 (417)
T ss_pred eeECCCCCCCcCCCCC
Confidence 4445444555555554
No 237
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.43 E-value=3e-13 Score=145.30 Aligned_cols=227 Identities=15% Similarity=0.181 Sum_probs=183.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE
Q 002591 666 SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR 745 (903)
Q Consensus 666 ~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~ 745 (903)
..-..+.|+.+|+.|+.|+..|.|..+|..+ ......+. -...|.++.|..+.. +||+ .....++|||-. |..++
T Consensus 130 FGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t-~~L~~Ei~-v~Etv~Dv~~LHneq-~~AV-AQK~y~yvYD~~-GtElH 204 (545)
T KOG1272|consen 130 FGPYHLDYTRNGRHLLLGGRKGHLAAFDWVT-KKLHFEIN-VMETVRDVTFLHNEQ-FFAV-AQKKYVYVYDNN-GTELH 204 (545)
T ss_pred cCCeeeeecCCccEEEecCCccceeeeeccc-ceeeeeee-hhhhhhhhhhhcchH-HHHh-hhhceEEEecCC-CcEEe
Confidence 3456789999999999999999999999998 44444443 456789999987644 5534 447889999955 55555
Q ss_pred Eee--cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC
Q 002591 746 VFK--GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGS 822 (903)
Q Consensus 746 ~~~--~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~ 822 (903)
.++ ..+..+.|.|..-.|++++..|.+..-|+.+|+.+..+....+.+..++-+|-.-++-+|..+ +|.+|...+.
T Consensus 205 Clk~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~sk- 283 (545)
T KOG1272|consen 205 CLKRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSK- 283 (545)
T ss_pred ehhhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCc-
Confidence 554 356778899998888888889999999999999999999888999999999988888888777 9999998765
Q ss_pred CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 823 EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 823 ~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
..+..+-+|.++|.++++.++|.|+++++.|..|+|||++....+ ++.. ......++||..| ++.++....|.|
T Consensus 284 --ePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg--lLA~~~G~~v~i 358 (545)
T KOG1272|consen 284 --EPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG--LLALSYGDHVQI 358 (545)
T ss_pred --chHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc--ceeeecCCeeee
Confidence 667777889999999999999999999999999999999987755 3333 5567788887655 444555667888
Q ss_pred cC
Q 002591 902 WK 903 (903)
Q Consensus 902 Wd 903 (903)
|+
T Consensus 359 w~ 360 (545)
T KOG1272|consen 359 WK 360 (545)
T ss_pred eh
Confidence 85
No 238
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.42 E-value=4.1e-12 Score=127.87 Aligned_cols=203 Identities=19% Similarity=0.250 Sum_probs=149.1
Q ss_pred eeeeEee-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE--------------e-----------------
Q 002591 614 KEANSVR-ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN--------------L----------------- 661 (903)
Q Consensus 614 ~~~~~l~-~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~--------------l----------------- 661 (903)
+.+..++ .|...|+.+.--|+ ..|.+=+.|+++.+|++.-...+.. +
T Consensus 46 r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rg 124 (323)
T KOG0322|consen 46 RDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRG 124 (323)
T ss_pred ccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcceEEEeeeeccccccccceeccCCCcchhheecCCcc
Confidence 3444455 56667777777776 4566677788888887653111100 0
Q ss_pred ----------------------ccCCCCeEEEEECC-CCC--EEEEEeCCCcEEEEeCCCCCc---------eeEEeccC
Q 002591 662 ----------------------EEHSSLITDVRFSP-SMP--RLATSSFDKTVRVWDADNPGY---------SLRTFMGH 707 (903)
Q Consensus 662 ----------------------~~h~~~V~~l~fsp-dg~--~Lasgs~Dg~I~IWDl~~~~~---------~~~~~~~h 707 (903)
....+.|.|..|.. +++ +|++|-.+|.|.+||+.+..+ .......|
T Consensus 125 sde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash 204 (323)
T KOG0322|consen 125 SDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASH 204 (323)
T ss_pred cchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhc
Confidence 01234566666533 233 456777799999999987422 23344579
Q ss_pred CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC--e-----eeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCC
Q 002591 708 SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG--S-----CTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQ 780 (903)
Q Consensus 708 ~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~--~-----~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~ 780 (903)
..+|.++.|.+.-..=+ +++.+..+..|++... . .+..-..++..+++-|+++.+++++.|+.|+||..++.
T Consensus 205 ~qpvlsldyas~~~rGi-sgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl 283 (323)
T KOG0322|consen 205 KQPVLSLDYASSCDRGI-SGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTL 283 (323)
T ss_pred cCcceeeeechhhcCCc-CCCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccC
Confidence 99999999987544334 7777888889988643 2 22222357888999999999999999999999999999
Q ss_pred eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 002591 781 ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTV 818 (903)
Q Consensus 781 ~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl 818 (903)
.++..++-|...|.+++|+|+..++|+++.| .|.+|++
T Consensus 284 ~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 284 NPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 9999999999999999999999999999999 9999986
No 239
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.42 E-value=4.4e-11 Score=138.59 Aligned_cols=202 Identities=16% Similarity=0.213 Sum_probs=145.4
Q ss_pred CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeC--CCcEEEEEcCCCeeeE--EeecCceeEEEecCCCE
Q 002591 687 KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG--DGEIRYWSINNGSCTR--VFKGGTAQMRFQPHLGR 762 (903)
Q Consensus 687 g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~--Dg~I~iwDi~t~~~~~--~~~~~~~~v~~sp~~~~ 762 (903)
..|.+||.+ +...+.+..|...+.+.+|+|++..++++... +..|++||+.+++... .+.+......|+|++..
T Consensus 182 ~~l~~~d~d--g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~ 259 (435)
T PRK05137 182 KRLAIMDQD--GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRK 259 (435)
T ss_pred eEEEEECCC--CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCE
Confidence 368888875 44556677788899999999999877765532 4689999999887543 34455667899999998
Q ss_pred EEEEE-cCC--eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCC
Q 002591 763 YLAAA-AEN--VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGN 835 (903)
Q Consensus 763 ll~~s-~dg--~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~ 835 (903)
++... .++ .|++||++++... .+..+.......+|+|||+.|+..+.. .|++||+..+. ...+.....
T Consensus 260 la~~~~~~g~~~Iy~~d~~~~~~~-~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~----~~~lt~~~~ 334 (435)
T PRK05137 260 VVMSLSQGGNTDIYTMDLRSGTTT-RLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN----PRRISFGGG 334 (435)
T ss_pred EEEEEecCCCceEEEEECCCCceE-EccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC----eEEeecCCC
Confidence 76554 344 5888899887654 355566667789999999988776643 68888876542 222222344
Q ss_pred ceEEEEEeCCCCEEEEEECCC---eEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 836 KFHSCVFHPTYPSLLVIGCYQ---SLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 836 ~i~si~~sp~g~~l~t~s~dg---~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
.+....|+|+|++|+....++ .|.+||+.++....+. ....+..+.|+|||++|+..+.+
T Consensus 335 ~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt-~~~~~~~p~~spDG~~i~~~~~~ 397 (435)
T PRK05137 335 RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILT-SGFLVEGPTWAPNGRVIMFFRQT 397 (435)
T ss_pred cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCceEecc-CCCCCCCCeECCCCCEEEEEEcc
Confidence 566788999999998877542 6889998766554333 23457789999999988776543
No 240
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.42 E-value=1.2e-12 Score=142.84 Aligned_cols=219 Identities=17% Similarity=0.247 Sum_probs=147.8
Q ss_pred ceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCC-CCeEEEEEeCCCcEE
Q 002591 656 KSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN-KDDLICSCDGDGEIR 734 (903)
Q Consensus 656 ~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~-~~~ll~sgs~Dg~I~ 734 (903)
.....+.+|.+.|+|+.|+.+|.+|++|+.|-.|.|||.-..+.....-++|...|.++.|-|. ++.++++|..|..|+
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~ 120 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIK 120 (758)
T ss_pred chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEE
Confidence 4456788999999999999999999999999999999998633334455699999999999986 566888999999999
Q ss_pred EEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCC-CEEEEEeCC-e
Q 002591 735 YWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSG-ELLASVSED-S 812 (903)
Q Consensus 735 iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg-~~lasgs~d-~ 812 (903)
++|+...+.-..-.+ -......+..|...|..|+-.|++ ..|.++++| +
T Consensus 121 lfdl~~~~~~~~d~~-----------------------------~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGt 171 (758)
T KOG1310|consen 121 LFDLDSSKEGGMDHG-----------------------------MEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGT 171 (758)
T ss_pred EEecccccccccccC-----------------------------ccchhhhhhhhhhhhhheecCCCCCceEEEecCCcc
Confidence 999986432111000 011222334577778888888877 577788888 8
Q ss_pred EEEEECCCCCCcc----e---EEEeecCCCceEEEEEeCCC-CEEEEEECCCeEEEEECCC--------Cc---------
Q 002591 813 VRVWTVGSGSEGE----C---VHELSCNGNKFHSCVFHPTY-PSLLVIGCYQSLELWNMSE--------NK--------- 867 (903)
Q Consensus 813 I~iwdl~s~~~~~----~---i~~~~~~~~~i~si~~sp~g-~~l~t~s~dg~I~vwdl~~--------~~--------- 867 (903)
|+-||++...... + +..+...--...++.++|.. .+|++|+.|-..++||.+. ++
T Consensus 172 irQyDiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~ 251 (758)
T KOG1310|consen 172 IRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDC 251 (758)
T ss_pred eeeecccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCccc
Confidence 8888887532110 1 01111112345678888865 4678888888999999431 11
Q ss_pred -EE--EEccCC--------C---CEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 868 -TM--TLTAHE--------G---LIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 868 -~~--~~~~h~--------~---~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
++ ...+|. . .++-+.|+|+|.-|+..-....|++||
T Consensus 252 ~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfd 301 (758)
T KOG1310|consen 252 RCVRYFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFD 301 (758)
T ss_pred chhheecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEe
Confidence 11 111232 1 245678899987555443344577664
No 241
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.41 E-value=2.1e-11 Score=127.72 Aligned_cols=226 Identities=18% Similarity=0.257 Sum_probs=143.3
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 619 VRASTSKVICCHFSSDGKLLATGGH-DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 619 l~~H~~~V~~l~fspdg~~Latgs~-Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
..+| ..|+++.|.+||..|++++. |..|.|||.+++..+.......+.++-+.|+||+.+|+++..|+..++|.....
T Consensus 192 ~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~ 270 (445)
T KOG2139|consen 192 DPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQS 270 (445)
T ss_pred CCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhccc
Confidence 3455 78999999999999999985 567999999998877777666778999999999999999999999999976652
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEEC
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDA 777 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~ 777 (903)
..+.+ ..-..+.|...+|+|+|..+|++++.. -++|.+.-...-..+.. .++......+-|+
T Consensus 271 wt~er-w~lgsgrvqtacWspcGsfLLf~~sgs--p~lysl~f~~~~~~~~~---------------~~~~k~~lliaDL 332 (445)
T KOG2139|consen 271 WTKER-WILGSGRVQTACWSPCGSFLLFACSGS--PRLYSLTFDGEDSVFLR---------------PQSIKRVLLIADL 332 (445)
T ss_pred ceecc-eeccCCceeeeeecCCCCEEEEEEcCC--ceEEEEeecCCCccccC---------------cccceeeeeeccc
Confidence 33333 333455999999999999999888754 44444322111111110 1111112222333
Q ss_pred CCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC---------eEEEEECCCCCCcceEEEeecCCCceEEEEEeC---C
Q 002591 778 ETQACRLSLQGHTKPIDSVCWDPSGELLASVSED---------SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP---T 845 (903)
Q Consensus 778 ~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d---------~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp---~ 845 (903)
..-....--+--.+++.+++|+|.|.+||+.-.+ .|.+||.+..........-...+.....+.|+| +
T Consensus 333 ~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~ 412 (445)
T KOG2139|consen 333 QEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNE 412 (445)
T ss_pred hhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccC
Confidence 2111100001124678899999999999987554 256677765422222211111122244455555 4
Q ss_pred CCEEEEEECCCeEEEEEC
Q 002591 846 YPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 846 g~~l~t~s~dg~I~vwdl 863 (903)
+..|.++-+.|.|.-|++
T Consensus 413 g~lLsiaWsTGriq~ypl 430 (445)
T KOG2139|consen 413 GRLLSIAWSTGRIQRYPL 430 (445)
T ss_pred CcEEEEEeccCceEeeee
Confidence 566666666777777664
No 242
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.41 E-value=1.2e-10 Score=134.98 Aligned_cols=232 Identities=15% Similarity=0.095 Sum_probs=160.0
Q ss_pred cEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC---CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCe
Q 002591 646 KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD---KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 722 (903)
Q Consensus 646 ~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D---g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ 722 (903)
.|.++|.+.. ....+..+...+...+|+|||+.|+..+.+ ..|.+||+.+ +.. ..+....+.+...+|+|+++.
T Consensus 180 ~l~~~d~~g~-~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~-g~~-~~l~~~~g~~~~~~~SpDG~~ 256 (430)
T PRK00178 180 TLQRSDYDGA-RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDT-GRR-EQITNFEGLNGAPAWSPDGSK 256 (430)
T ss_pred EEEEECCCCC-CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCC-CCE-EEccCCCCCcCCeEECCCCCE
Confidence 4777787644 445666777889999999999999877653 3689999986 332 333334445567899999998
Q ss_pred EEEEEeCCC--cEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcC---CeEEEEECCCCeEEEEecCCCCCeEE
Q 002591 723 LICSCDGDG--EIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAE---NVVSILDAETQACRLSLQGHTKPIDS 795 (903)
Q Consensus 723 ll~sgs~Dg--~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~d---g~I~i~D~~t~~~~~~l~~h~~~V~s 795 (903)
++++.+.+| .|++||+.+++...... .......|+|++..++..+.. ..|+++|+.+++...... .......
T Consensus 257 la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~-~~~~~~~ 335 (430)
T PRK00178 257 LAFVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTF-VGNYNAR 335 (430)
T ss_pred EEEEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec-CCCCccc
Confidence 887776666 58888999887554332 234557899999988877652 368888988876543322 2233446
Q ss_pred EEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCcE
Q 002591 796 VCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY---QSLELWNMSENKT 868 (903)
Q Consensus 796 l~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwdl~~~~~ 868 (903)
..|+|+|++|+..+.+ .|.+||+.++.. ..+. . ........|+|+|+.|+..+.+ ..|+++++..+..
T Consensus 336 ~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt---~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~ 410 (430)
T PRK00178 336 PRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RILT---D-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVR 410 (430)
T ss_pred eEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEcc---C-CCCCCCceECCCCCEEEEEEecCCceEEEEEECCCCce
Confidence 7899999988776543 588999987632 2221 1 1122345899999999887765 3688888876666
Q ss_pred EEEccCCCCEEEEEEecC
Q 002591 869 MTLTAHEGLIAALAVSTE 886 (903)
Q Consensus 869 ~~~~~h~~~V~sl~~spd 886 (903)
..+..+.+.+...+|+|-
T Consensus 411 ~~l~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 411 LPLPTAQGEVREPSWSPY 428 (430)
T ss_pred EECcCCCCCcCCCccCCC
Confidence 566566677788888763
No 243
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.38 E-value=1.7e-10 Score=133.78 Aligned_cols=231 Identities=15% Similarity=0.141 Sum_probs=155.4
Q ss_pred cEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC-C--cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCe
Q 002591 646 KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD-K--TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD 722 (903)
Q Consensus 646 ~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D-g--~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ 722 (903)
.|.++|.+... .+.+..+...+.+..|+|||+.|+..+.+ + .|++||+.+ +.. ..+...........|+|+++.
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~t-g~~-~~lt~~~g~~~~~~wSPDG~~ 275 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYT-QVR-EKVTSFPGINGAPRFSPDGKK 275 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCC-CCe-EEecCCCCCcCCeeECCCCCE
Confidence 57777865433 45566677889999999999998877543 3 588889876 332 223322334456899999998
Q ss_pred EEEEEeCCCc--EEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEc-C--CeEEEEECCCCeEEEEecCCCCCeEE
Q 002591 723 LICSCDGDGE--IRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAA-E--NVVSILDAETQACRLSLQGHTKPIDS 795 (903)
Q Consensus 723 ll~sgs~Dg~--I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~-d--g~I~i~D~~t~~~~~~l~~h~~~V~s 795 (903)
++++.+.+|. |++||+.+++....... ......|+|++..++..+. + ..|+++|+.+++..... ........
T Consensus 276 La~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt-~~g~~~~~ 354 (448)
T PRK04792 276 LALVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLT-FEGEQNLG 354 (448)
T ss_pred EEEEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEe-cCCCCCcC
Confidence 8877777775 77888888765443322 3456889999998877765 2 36777888887654332 12233445
Q ss_pred EEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCcE
Q 002591 796 VCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---SLELWNMSENKT 868 (903)
Q Consensus 796 l~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---~I~vwdl~~~~~ 868 (903)
.+|+|||++|+..+.+ .|.++|+.++.. .. +... .......|+|+|+.|+....++ .|++++......
T Consensus 355 ~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~---lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~ 429 (448)
T PRK04792 355 GSITPDGRSMIMVNRTNGKFNIARQDLETGAM-QV---LTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFK 429 (448)
T ss_pred eeECCCCCEEEEEEecCCceEEEEEECCCCCe-EE---ccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCce
Confidence 7899999987766543 466678776532 11 2111 1122447999999988876653 488888865555
Q ss_pred EEEccCCCCEEEEEEec
Q 002591 869 MTLTAHEGLIAALAVST 885 (903)
Q Consensus 869 ~~~~~h~~~V~sl~~sp 885 (903)
..+..+.+.+...+|+|
T Consensus 430 ~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 430 ARLPAGQGEVKSPAWSP 446 (448)
T ss_pred EECcCCCCCcCCCccCC
Confidence 56666667788888886
No 244
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.37 E-value=1.7e-11 Score=143.70 Aligned_cols=265 Identities=16% Similarity=0.212 Sum_probs=185.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEE-CC------CCCEEEEEeCCCcEEEEeC
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF-SP------SMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~f-sp------dg~~Lasgs~Dg~I~IWDl 694 (903)
|-+++++..+-. +||++|. --.|.+||+..+..+..+.... ++.+ .. .+.+++++..-+.+..=+.
T Consensus 6 ~~~~l~~~~~~~--~~llag~-gp~i~~yd~~s~~li~~~~~~~----~~~~H~~e~~~~l~~~~~v~~~~~~~v~~~~~ 78 (967)
T KOG0974|consen 6 SLGPLNLPQLVS--DYLLAGS-GPEILVYDLSSGCLIRHLIQSK----ILEVHRGEGKVKLLSGKIVTCAKSDEVYVKEA 78 (967)
T ss_pred ccccccchhhcc--ceeeecC-CCceEEeeCCchhHhhhhhhhc----ccccccccccceeccceEEEEEeecceeecch
Confidence 344566666554 4676654 4479999998876655443210 1111 11 2335555554443443332
Q ss_pred CCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCcee-------EEEecCCCEEEEEE
Q 002591 695 DNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQ-------MRFQPHLGRYLAAA 767 (903)
Q Consensus 695 ~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~-------v~~sp~~~~ll~~s 767 (903)
.. .....+ .+.|....+..+.. .++....+..+.+||...+...........+ +-++++.-++++++
T Consensus 79 ~~--~~~~~~---s~wi~g~~l~~e~k-~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gs 152 (967)
T KOG0974|consen 79 SN--QIIERF---SDWIFGAKLFEENK-KIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGS 152 (967)
T ss_pred hh--hhhhhc---cccccccchhhhcc-eEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEecc
Confidence 21 112222 23333344444434 4456666889999999887766555443222 22445555677778
Q ss_pred cCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC
Q 002591 768 AENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g 846 (903)
.-+.|.+|+....+....+.+|++.|.++.|+.||.++++.++| ++++|++.+.+... ...-+|...+..++|+|+
T Consensus 153 v~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~--~~~fgHsaRvw~~~~~~n- 229 (967)
T KOG0974|consen 153 VFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG--CTGFGHSARVWACCFLPN- 229 (967)
T ss_pred ccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC--cccccccceeEEEEeccc-
Confidence 88999999998655555789999999999999999999999999 99999999875444 355678999999999999
Q ss_pred CEEEEEECCCeEEEEECCCCcEEEEccCC-CCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 847 PSLLVIGCYQSLELWNMSENKTMTLTAHE-GLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 847 ~~l~t~s~dg~I~vwdl~~~~~~~~~~h~-~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
++++++.|-+.++|+.+...+..+..|. ..|+.++..++.-.++|++.|+.|++|+
T Consensus 230 -~i~t~gedctcrvW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~ 286 (967)
T KOG0974|consen 230 -RIITVGEDCTCRVWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWD 286 (967)
T ss_pred -eeEEeccceEEEEEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhh
Confidence 8999999999999987766666777775 5799999999999999999999999996
No 245
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.37 E-value=1.1e-09 Score=120.52 Aligned_cols=256 Identities=10% Similarity=0.075 Sum_probs=167.7
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCCceeEEeccCC------
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF----------DKTVRVWDADNPGYSLRTFMGHS------ 708 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~----------Dg~I~IWDl~~~~~~~~~~~~h~------ 708 (903)
++|.|.|.++++.+.++..-..+-. + ++||++.|++++. +..|.+||+.+ .+.+..+.-..
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t-~~~~~~i~~p~~p~~~~ 103 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT-HLPIADIELPEGPRFLV 103 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECcc-CcEEeEEccCCCchhhc
Confidence 7999999999999998875444333 4 9999998877755 78899999998 66666555321
Q ss_pred -CceEEEEecCCCCeEEEEEeC-CCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCC-CeE-EE
Q 002591 709 -ASVMSLDFHPNKDDLICSCDG-DGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAET-QAC-RL 784 (903)
Q Consensus 709 -~~V~sl~fsp~~~~ll~sgs~-Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t-~~~-~~ 784 (903)
.....++++|+|+.++++--. +..|.++|+.+++.+..+..+.....+-.....+.+-+.||......+.+ ++. ..
T Consensus 104 ~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~ 183 (352)
T TIGR02658 104 GTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTKGNPKIK 183 (352)
T ss_pred cCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCCCceEEe
Confidence 223468999999987755534 89999999999999988775433322222222333344555444433222 221 11
Q ss_pred E---ecCCCCCeE-EEEEcC-CCCEEEEEeCCeEEEEECCCCCC--cceEEEeec-------CCCceEEEEEeCCCCEEE
Q 002591 785 S---LQGHTKPID-SVCWDP-SGELLASVSEDSVRVWTVGSGSE--GECVHELSC-------NGNKFHSCVFHPTYPSLL 850 (903)
Q Consensus 785 ~---l~~h~~~V~-sl~~sp-dg~~lasgs~d~I~iwdl~s~~~--~~~i~~~~~-------~~~~i~si~~sp~g~~l~ 850 (903)
. +.....++. .-.|.+ +|++++...+++|.+.|+..... ...+..+.. ....+.-+++++++++++
T Consensus 184 ~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~ly 263 (352)
T TIGR02658 184 PTEVFHPEDEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIY 263 (352)
T ss_pred eeeeecCCccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEE
Confidence 1 111011110 013455 88888777778999999754321 111111111 122334489999999998
Q ss_pred EEEC----------CCeEEEEECCCCcEEEEccCCCCEEEEEEecCCC-EEEEEe-cCCcEEEcC
Q 002591 851 VIGC----------YQSLELWNMSENKTMTLTAHEGLIAALAVSTETG-YVASAS-HDKFVKLWK 903 (903)
Q Consensus 851 t~s~----------dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~-~LaSgs-~DG~I~IWd 903 (903)
+... .+.|.++|..+++.+....-...+..+++++|++ +|++.+ .++.|.++|
T Consensus 264 V~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD 328 (352)
T TIGR02658 264 LLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFD 328 (352)
T ss_pred EEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEE
Confidence 8531 2489999999999996665667999999999999 887766 577788875
No 246
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.7e-09 Score=114.58 Aligned_cols=263 Identities=16% Similarity=0.158 Sum_probs=185.1
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCC--CceeE--EeccCCCCeEEEEECCCCCEEEEEeC-CCcEEEE
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHD---KKAVLWHTDT--LKSKT--NLEEHSSLITDVRFSPSMPRLATSSF-DKTVRVW 692 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~D---g~V~vWd~~t--~~~~~--~l~~h~~~V~~l~fspdg~~Lasgs~-Dg~I~IW 692 (903)
.+.+.++-|+|+++.++|.++..+ |.|..|.++. |+... .......+-+.|++++++++|+++.. -|.|.++
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~ 116 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY 116 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence 467789999999999999988654 7788887774 43322 22222333488999999999999987 6899999
Q ss_pred eCCCCCceeE--EeccCCCc----------eEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe----e--cCceeE
Q 002591 693 DADNPGYSLR--TFMGHSAS----------VMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF----K--GGTAQM 754 (903)
Q Consensus 693 Dl~~~~~~~~--~~~~h~~~----------V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~----~--~~~~~v 754 (903)
-+.+.+.... ....|.+. +.+..|.|++++++++.-.-..|.+|++..++....- + .+...+
T Consensus 117 p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi 196 (346)
T COG2706 117 PLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHI 196 (346)
T ss_pred EcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceE
Confidence 9977554322 22335554 8889999998877755545568999999987654322 2 356789
Q ss_pred EEecCCCEEEEEEc-CCeEEEEECCCC-eEEEEecC---------CCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCC
Q 002591 755 RFQPHLGRYLAAAA-ENVVSILDAETQ-ACRLSLQG---------HTKPIDSVCWDPSGELLASVSED--SVRVWTVGSG 821 (903)
Q Consensus 755 ~~sp~~~~ll~~s~-dg~I~i~D~~t~-~~~~~l~~---------h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~ 821 (903)
.|+|+++...+.+. +++|.+|+.... ..+..+.. ...+...|.+++||++|+++... .|.+|.+...
T Consensus 197 ~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~ 276 (346)
T COG2706 197 VFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPD 276 (346)
T ss_pred EEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCC
Confidence 99999998777766 899999988763 22222211 23457789999999999999876 8899988754
Q ss_pred CC-cceEEEeecCCCceEEEEEeCCCCEEEEEECCC-eEEEEEC--CCCcEEEEc--cCCCCEEEEEE
Q 002591 822 SE-GECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ-SLELWNM--SENKTMTLT--AHEGLIAALAV 883 (903)
Q Consensus 822 ~~-~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg-~I~vwdl--~~~~~~~~~--~h~~~V~sl~~ 883 (903)
.. ...+.....+......+.|++.+++|+++..++ .|.+|.+ .+|++..+. .......|+.|
T Consensus 277 ~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f 344 (346)
T COG2706 277 GGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKF 344 (346)
T ss_pred CCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEE
Confidence 32 344444455555688999999999999999875 6777755 455554222 33444555555
No 247
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.35 E-value=5.5e-11 Score=121.68 Aligned_cols=108 Identities=23% Similarity=0.477 Sum_probs=86.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEe--CC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC---CeEEEEE
Q 002591 789 HTKPIDSVCWDPSGELLASVS--ED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY---QSLELWN 862 (903)
Q Consensus 789 h~~~V~sl~~spdg~~lasgs--~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwd 862 (903)
..++|.+++|+|+|+.|++.. .+ .|.+||++ ...+..+. ...+..+.|+|+|++|++++.+ |.|.|||
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~----~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd 131 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK----GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWD 131 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc----ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEE
Confidence 345799999999999765543 34 89999996 24444443 5677889999999999998854 5799999
Q ss_pred CCCCcEEEEccCCCCEEEEEEecCCCEEEEEec------CCcEEEcC
Q 002591 863 MSENKTMTLTAHEGLIAALAVSTETGYVASASH------DKFVKLWK 903 (903)
Q Consensus 863 l~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~------DG~I~IWd 903 (903)
+++.+.+....|.. ++.++|+|||++|+++.. |+.++||+
T Consensus 132 ~~~~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~ 177 (194)
T PF08662_consen 132 VRKKKKISTFEHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWS 177 (194)
T ss_pred CCCCEEeeccccCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEE
Confidence 99888886666654 789999999999999874 78888885
No 248
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.34 E-value=1.4e-10 Score=127.39 Aligned_cols=283 Identities=14% Similarity=0.187 Sum_probs=188.4
Q ss_pred cCcceeeeeEeecCCCCeEEEEEcCCCCEEEEEeC-----------CCcEEEEECCCCceeEEeccC--CCCe-EEEEEC
Q 002591 609 QGFSFKEANSVRASTSKVICCHFSSDGKLLATGGH-----------DKKAVLWHTDTLKSKTNLEEH--SSLI-TDVRFS 674 (903)
Q Consensus 609 ~~~~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~-----------Dg~V~vWd~~t~~~~~~l~~h--~~~V-~~l~fs 674 (903)
.|-+|..+..|. |. .|.-+.|||..+||+|-+. ...++|||+.+|...+.|... ...+ .-..||
T Consensus 237 GG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS 314 (698)
T KOG2314|consen 237 GGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWS 314 (698)
T ss_pred cCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEec
Confidence 333555555543 55 4899999999999999652 246999999999999888762 2223 346899
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeC-----CCcEEEEEcCCCeeeEEee-
Q 002591 675 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDG-----DGEIRYWSINNGSCTRVFK- 748 (903)
Q Consensus 675 pdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~-----Dg~I~iwDi~t~~~~~~~~- 748 (903)
.|++++|.-..| .|.||+..+ -..+..-.-.-..|..+.|+|.+. +||--.. -..+.+..+.++..+++-.
T Consensus 315 ~DdKy~Arm~~~-sisIyEtps-f~lld~Kslki~gIr~FswsP~~~-llAYwtpe~~~~parvtL~evPs~~~iRt~nl 391 (698)
T KOG2314|consen 315 HDDKYFARMTGN-SISIYETPS-FMLLDKKSLKISGIRDFSWSPTSN-LLAYWTPETNNIPARVTLMEVPSKREIRTKNL 391 (698)
T ss_pred cCCceeEEeccc-eEEEEecCc-eeeecccccCCccccCcccCCCcc-eEEEEcccccCCcceEEEEecCccceeeeccc
Confidence 999999887765 499998765 222221122335688889999855 4432211 2356677777776665433
Q ss_pred --cCceeEEEecCCCEEEEEEc-------C---CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----e
Q 002591 749 --GGTAQMRFQPHLGRYLAAAA-------E---NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----S 812 (903)
Q Consensus 749 --~~~~~v~~sp~~~~ll~~s~-------d---g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~ 812 (903)
-....+.|...|.+|++-.. . ..+.|+.++........-.-...|...+|.|.|+.+++-+.. +
T Consensus 392 fnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi~FaWEP~gdkF~vi~g~~~k~t 471 (698)
T KOG2314|consen 392 FNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVIAFAWEPHGDKFAVISGNTVKNT 471 (698)
T ss_pred eeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchheeeeeeccCCCeEEEEEccccccc
Confidence 23334567777776665332 1 245667666654433333356788999999999966655433 7
Q ss_pred EEEEECC-CCCCcceEEEeecCCCceEEEEEeCCCCEEEEEE---CCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCC
Q 002591 813 VRVWTVG-SGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIG---CYQSLELWNMSENKTM-TLTAHEGLIAALAVSTET 887 (903)
Q Consensus 813 I~iwdl~-s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s---~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg 887 (903)
+.+|.+. +......+..+. ....+.+.|+|.|++++++. ..|.+.+||+.-..+. +-.......+.+.|+|.|
T Consensus 472 vsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtG 549 (698)
T KOG2314|consen 472 VSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTG 549 (698)
T ss_pred eeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCC
Confidence 9999998 444455555554 35677889999999988875 4579999999853333 222233457789999999
Q ss_pred CEEEEEecCCc
Q 002591 888 GYVASASHDKF 898 (903)
Q Consensus 888 ~~LaSgs~DG~ 898 (903)
+|++|++.-+.
T Consensus 550 RYvvT~ss~wr 560 (698)
T KOG2314|consen 550 RYVVTSSSSWR 560 (698)
T ss_pred CEEEEeeehhh
Confidence 99999986543
No 249
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.31 E-value=1.1e-10 Score=119.49 Aligned_cols=148 Identities=13% Similarity=0.278 Sum_probs=110.1
Q ss_pred EEEEECCCCCEEEEEeC----------CCcEEEEeCCCCCceeEEecc-CCCceEEEEecCCCCeEEEE-EeCCCcEEEE
Q 002591 669 TDVRFSPSMPRLATSSF----------DKTVRVWDADNPGYSLRTFMG-HSASVMSLDFHPNKDDLICS-CDGDGEIRYW 736 (903)
Q Consensus 669 ~~l~fspdg~~Lasgs~----------Dg~I~IWDl~~~~~~~~~~~~-h~~~V~sl~fsp~~~~ll~s-gs~Dg~I~iw 736 (903)
..+.|+++|++|++-.. -+...||.++.....+..+.- ..+.|.+++|+|++..++++ |..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 46789999987655433 234566666543444444432 34579999999999887544 4567899999
Q ss_pred EcCCCeeeEEee-cCceeEEEecCCCEEEEEEcC---CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC--
Q 002591 737 SINNGSCTRVFK-GGTAQMRFQPHLGRYLAAAAE---NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE-- 810 (903)
Q Consensus 737 Di~t~~~~~~~~-~~~~~v~~sp~~~~ll~~s~d---g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~-- 810 (903)
|++ ++.+..+. .....+.|+|+|+++++++.+ |.|.+||.++.+.+..+. | ..++.++|+|+|++|+++..
T Consensus 89 d~~-~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~-~~~t~~~WsPdGr~~~ta~t~~ 165 (194)
T PF08662_consen 89 DVK-GKKIFSFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-H-SDATDVEWSPDGRYLATATTSP 165 (194)
T ss_pred cCc-ccEeEeecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-c-CcEEEEEEcCCCCEEEEEEecc
Confidence 997 55555554 457789999999999998754 679999999998887765 3 34789999999999998763
Q ss_pred ----C-eEEEEECC
Q 002591 811 ----D-SVRVWTVG 819 (903)
Q Consensus 811 ----d-~I~iwdl~ 819 (903)
| .++||++.
T Consensus 166 r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 166 RLRVDNGFKIWSFQ 179 (194)
T ss_pred ceeccccEEEEEec
Confidence 4 78999984
No 250
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.30 E-value=1.4e-09 Score=125.31 Aligned_cols=236 Identities=15% Similarity=0.135 Sum_probs=155.1
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCE--E-EEEeCCC--cEEEEeCCCCCceeEEeccCCCceEEEEecCC
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR--L-ATSSFDK--TVRVWDADNPGYSLRTFMGHSASVMSLDFHPN 719 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~--L-asgs~Dg--~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~ 719 (903)
+.|.+.|.+.+ ..+.+......+..-+|+|||+. + ++...+| .|.+.++.+ +. .+.+....+.....+|+||
T Consensus 165 ~~l~~~d~dG~-~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~-g~-~~~lt~~~g~~~~p~wSPD 241 (428)
T PRK01029 165 GELWSVDYDGQ-NLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLEN-PA-GKKILALQGNQLMPTFSPR 241 (428)
T ss_pred ceEEEEcCCCC-CceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCC-CC-ceEeecCCCCccceEECCC
Confidence 35777776644 34455556667788999999975 3 2444444 477778875 32 2333334455567899999
Q ss_pred CCeEEEEEeCCC----cEEEEEcCCC---eeeEEeec---CceeEEEecCCCEEEEEEc-CCe--EEEEECCC-CeEEEE
Q 002591 720 KDDLICSCDGDG----EIRYWSINNG---SCTRVFKG---GTAQMRFQPHLGRYLAAAA-ENV--VSILDAET-QACRLS 785 (903)
Q Consensus 720 ~~~ll~sgs~Dg----~I~iwDi~t~---~~~~~~~~---~~~~v~~sp~~~~ll~~s~-dg~--I~i~D~~t-~~~~~~ 785 (903)
|+.++++.+.+| .+.+|++..+ +....... .....+|+|++..|+..+. ++. |+++++.. +.....
T Consensus 242 G~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~ 321 (428)
T PRK01029 242 KKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRL 321 (428)
T ss_pred CCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEE
Confidence 998887765444 3444776653 33333322 2356799999998887764 554 55555542 233444
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC---CeE
Q 002591 786 LQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY---QSL 858 (903)
Q Consensus 786 l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d---g~I 858 (903)
+..+...+....|+|||+.|+..+.+ .|.+||+.+++. ..+......+....|+|||++|+....+ ..|
T Consensus 322 lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~----~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L 397 (428)
T PRK01029 322 LTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRD----YQLTTSPENKESPSWAIDSLHLVYSAGNSNESEL 397 (428)
T ss_pred eccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCe----EEccCCCCCccceEECCCCCEEEEEECCCCCceE
Confidence 44455677889999999988766542 699999987632 2222223456778999999998876543 479
Q ss_pred EEEECCCCcEEEEccCCCCEEEEEEecCC
Q 002591 859 ELWNMSENKTMTLTAHEGLIAALAVSTET 887 (903)
Q Consensus 859 ~vwdl~~~~~~~~~~h~~~V~sl~~spdg 887 (903)
++||+.+++...+....+.+...+|+|-.
T Consensus 398 ~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 398 YLISLITKKTRKIVIGSGEKRFPSWGAFP 426 (428)
T ss_pred EEEECCCCCEEEeecCCCcccCceecCCC
Confidence 99999998877666666677788888743
No 251
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.28 E-value=8.3e-10 Score=127.34 Aligned_cols=202 Identities=16% Similarity=0.235 Sum_probs=144.2
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCC--CcEEEEEcCCCeeeEE--eecCceeEEEecCCCEE
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD--GEIRYWSINNGSCTRV--FKGGTAQMRFQPHLGRY 763 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D--g~I~iwDi~t~~~~~~--~~~~~~~v~~sp~~~~l 763 (903)
.|.++|... ...+.+..+...+.+.+|+|+++.++++...+ ..|++||+.+++.... +.+....++|+|+++.+
T Consensus 171 ~l~~~d~~g--~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l 248 (417)
T TIGR02800 171 ELQVADYDG--ANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKL 248 (417)
T ss_pred eEEEEcCCC--CCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEE
Confidence 577888753 33555666777899999999999877665433 5799999998864433 34455678999999888
Q ss_pred EEEEc-C--CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCc
Q 002591 764 LAAAA-E--NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 764 l~~s~-d--g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
++... + ..|++||+.++.... +..+........|+|||+.|+.++.. .|++||+.++. ...+..+...
T Consensus 249 ~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~----~~~l~~~~~~ 323 (417)
T TIGR02800 249 AVSLSKDGNPDIYVMDLDGKQLTR-LTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE----VRRLTFRGGY 323 (417)
T ss_pred EEEECCCCCccEEEEECCCCCEEE-CCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC----EEEeecCCCC
Confidence 76543 3 369999998875443 34455555678999999987766542 58888887542 2233334556
Q ss_pred eEEEEEeCCCCEEEEEECCC---eEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCC
Q 002591 837 FHSCVFHPTYPSLLVIGCYQ---SLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDK 897 (903)
Q Consensus 837 i~si~~sp~g~~l~t~s~dg---~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG 897 (903)
+....|+|++++|+.++.++ .|.+||+.++....+... .......|+||+++|+.++.++
T Consensus 324 ~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~-~~~~~p~~spdg~~l~~~~~~~ 386 (417)
T TIGR02800 324 NASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDT-GLDESPSFAPNGRMILYATTRG 386 (417)
T ss_pred ccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCC-CCCCCceECCCCCEEEEEEeCC
Confidence 67889999999999988876 899999988766544433 2345678999999888877654
No 252
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.28 E-value=6.7e-10 Score=128.81 Aligned_cols=218 Identities=20% Similarity=0.271 Sum_probs=143.4
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCC-C--cEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEE-EeCCCc--EEE
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHD-K--KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT-SSFDKT--VRV 691 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~D-g--~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Las-gs~Dg~--I~I 691 (903)
.+..+...+.+..|+|||+.|+..+.+ + .|++||+.+++... +..........+|+|||+.|+. .+.++. |++
T Consensus 212 ~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~ 290 (448)
T PRK04792 212 MLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYV 290 (448)
T ss_pred EeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEE
Confidence 444567788999999999988876543 2 58889988776432 3333334557899999998765 455665 777
Q ss_pred EeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCc--EEEEEcCCCeeeEE-eecC-ceeEEEecCCCEEEEEE
Q 002591 692 WDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE--IRYWSINNGSCTRV-FKGG-TAQMRFQPHLGRYLAAA 767 (903)
Q Consensus 692 WDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~--I~iwDi~t~~~~~~-~~~~-~~~v~~sp~~~~ll~~s 767 (903)
||+.+ + ..+.+..+...+...+|+|++..++++...++. |+++|+.+++..+. +.+. .....|+|+++.++..+
T Consensus 291 ~dl~t-g-~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~ 368 (448)
T PRK04792 291 VDIAT-K-ALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVN 368 (448)
T ss_pred EECCC-C-CeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEE
Confidence 78875 3 345555566667789999999988877765554 66667877765443 2222 23468999999888876
Q ss_pred cC-C--eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEE
Q 002591 768 AE-N--VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSC 840 (903)
Q Consensus 768 ~d-g--~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si 840 (903)
.+ + .|.++|+.+++... +... .......|+|||++|+..+.+ .+++++.. + .....+......+...
T Consensus 369 ~~~g~~~I~~~dl~~g~~~~-lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G---~~~~~l~~~~g~~~~p 442 (448)
T PRK04792 369 RTNGKFNIARQDLETGAMQV-LTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-G---RFKARLPAGQGEVKSP 442 (448)
T ss_pred ecCCceEEEEEECCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECC-C---CceEECcCCCCCcCCC
Confidence 53 3 56778988876543 2222 122345899999977665433 46777763 2 2333343334455666
Q ss_pred EEeC
Q 002591 841 VFHP 844 (903)
Q Consensus 841 ~~sp 844 (903)
+|+|
T Consensus 443 ~Wsp 446 (448)
T PRK04792 443 AWSP 446 (448)
T ss_pred ccCC
Confidence 7766
No 253
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=8.9e-10 Score=127.68 Aligned_cols=220 Identities=19% Similarity=0.218 Sum_probs=147.5
Q ss_pred eeEeecCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEE-EeCCC--cE
Q 002591 616 ANSVRASTSKVICCHFSSDGKLLATGGHD---KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLAT-SSFDK--TV 689 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~~Latgs~D---g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Las-gs~Dg--~I 689 (903)
...+..+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+...+|+|||+.|+. .+.+| .|
T Consensus 191 ~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~I 269 (430)
T PRK00178 191 AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEI 269 (430)
T ss_pred ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceE
Confidence 34455677889999999999999877644 368999998876543 3334445667999999998874 44455 58
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCC--cEEEEEcCCCeeeEEee-c-CceeEEEecCCCEEEE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG--EIRYWSINNGSCTRVFK-G-GTAQMRFQPHLGRYLA 765 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg--~I~iwDi~t~~~~~~~~-~-~~~~v~~sp~~~~ll~ 765 (903)
++||+.+ +. ...+..+........|+|++..++++...+| .|+++|+.+++..+... + ......|+|+++.++.
T Consensus 270 y~~d~~~-~~-~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~ 347 (430)
T PRK00178 270 YVMDLAS-RQ-LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVM 347 (430)
T ss_pred EEEECCC-CC-eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEE
Confidence 8889886 33 4455556666777899999998887765554 57777888777544332 2 2334689999999888
Q ss_pred EEcCC---eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 766 AAAEN---VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 766 ~s~dg---~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
...++ .|.+||+.+++...... ........|+|||++|+..+.+ .|.++++... ....+....+.+.
T Consensus 348 ~~~~~~~~~l~~~dl~tg~~~~lt~--~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~----~~~~l~~~~g~~~ 421 (430)
T PRK00178 348 VHRQDGNFHVAAQDLQRGSVRILTD--TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGR----VRLPLPTAQGEVR 421 (430)
T ss_pred EEccCCceEEEEEECCCCCEEEccC--CCCCCCceECCCCCEEEEEEecCCceEEEEEECCCC----ceEECcCCCCCcC
Confidence 77542 58889999886543222 2233356899999977765543 4677777432 2222333344455
Q ss_pred EEEEeC
Q 002591 839 SCVFHP 844 (903)
Q Consensus 839 si~~sp 844 (903)
..+|+|
T Consensus 422 ~p~ws~ 427 (430)
T PRK00178 422 EPSWSP 427 (430)
T ss_pred CCccCC
Confidence 566665
No 254
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.26 E-value=4.9e-10 Score=125.65 Aligned_cols=274 Identities=18% Similarity=0.275 Sum_probs=196.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC---------------ceeEEeccCCCCeEEEEECCCCCEEEEEeCC
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL---------------KSKTNLEEHSSLITDVRFSPSMPRLATSSFD 686 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~---------------~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D 686 (903)
......|++|+....+||+|+.||.++|..+.+. ..-.++.+|+..|.-+.|+.+...|-++..+
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~ 92 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS 92 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence 3456889999999999999999999999987532 1123578999999999999999999999999
Q ss_pred CcEEEEeCCCCCceeEEec-cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-EEeec-CceeEEEecCCCEE
Q 002591 687 KTVRVWDADNPGYSLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-RVFKG-GTAQMRFQPHLGRY 763 (903)
Q Consensus 687 g~I~IWDl~~~~~~~~~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-~~~~~-~~~~v~~sp~~~~l 763 (903)
|-|.||-+.++..+-..+. ...+.|.+++|.-+|..+ +....||.|.+=.++..+.. +.+++ ....+.|+++...+
T Consensus 93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kI-cIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~ 171 (1189)
T KOG2041|consen 93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKI-CIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQA 171 (1189)
T ss_pred ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEE-EEEEccCCEEEEeeccceecchhcchheccceeecccHHHH
Confidence 9999999987544332222 345678999999998754 57788999888777654432 22332 34568899999999
Q ss_pred EEEEcCCeEEEEECCCC-------eEEEE----ecCCCCCeEEEEEc--------CCCCEEEEEeCC-eEEEEECCCCCC
Q 002591 764 LAAAAENVVSILDAETQ-------ACRLS----LQGHTKPIDSVCWD--------PSGELLASVSED-SVRVWTVGSGSE 823 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t~-------~~~~~----l~~h~~~V~sl~~s--------pdg~~lasgs~d-~I~iwdl~s~~~ 823 (903)
+.+-..|.+.+||.... .+... +......|..++|. |+...|+.+-.+ .+.|..-.+...
T Consensus 172 Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~ 251 (1189)
T KOG2041|consen 172 LFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPE 251 (1189)
T ss_pred HhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCC
Confidence 99999999999997542 12111 12223346667774 466677777666 666655444333
Q ss_pred cceEEEeecCCCceEEEEEeCCCCEEEEEECCC---------eEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEe
Q 002591 824 GECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---------SLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASAS 894 (903)
Q Consensus 824 ~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---------~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs 894 (903)
+..+.. +-.+..+.|+++|..|++++.+. .|.+|..-..-.-++......|++++|-..|-.++.+
T Consensus 252 Pvv~dt----gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G~i~gtlkvpg~~It~lsWEg~gLriA~A- 326 (1189)
T KOG2041|consen 252 PVVVDT----GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYGHIVGTLKVPGSCITGLSWEGTGLRIAIA- 326 (1189)
T ss_pred CeEEec----ccEeecceecCCCcEEEEccCcccccCccccceEEEeccchhheEEEecCCceeeeeEEcCCceEEEEE-
Confidence 222222 46788899999999999998753 5777766554444778888899999997777666665
Q ss_pred cCCcEEE
Q 002591 895 HDKFVKL 901 (903)
Q Consensus 895 ~DG~I~I 901 (903)
.|+.|++
T Consensus 327 vdsfiyf 333 (1189)
T KOG2041|consen 327 VDSFIYF 333 (1189)
T ss_pred ecceEEE
Confidence 4666654
No 255
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.26 E-value=6.4e-10 Score=123.94 Aligned_cols=184 Identities=18% Similarity=0.287 Sum_probs=147.3
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEecc---CCCCeEEEEE------CC--------------CCCEEEEEeCCCcE
Q 002591 633 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEE---HSSLITDVRF------SP--------------SMPRLATSSFDKTV 689 (903)
Q Consensus 633 pdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~---h~~~V~~l~f------sp--------------dg~~Lasgs~Dg~I 689 (903)
+-..++|....||.++|||+.+++....|.. -++..++..| +| +-..|+-|...|.|
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v 82 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSV 82 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccE
Confidence 4456899999999999999998887776653 2344555555 22 33467888889999
Q ss_pred EEEeCCCCCceeEEec--cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec---CceeEEEecCCCEEE
Q 002591 690 RVWDADNPGYSLRTFM--GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG---GTAQMRFQPHLGRYL 764 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~--~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~---~~~~v~~sp~~~~ll 764 (903)
.+|++.. ++....+. .|.+.|.++.++.+-. .|.+++.|+.|.+|+......++.++. .+..++++|+++.++
T Consensus 83 ~~ys~~~-g~it~~~st~~h~~~v~~~~~~~~~~-ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~ 160 (541)
T KOG4547|consen 83 LLYSVAG-GEITAKLSTDKHYGNVNEILDAQRLG-CIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILL 160 (541)
T ss_pred EEEEecC-CeEEEEEecCCCCCcceeeecccccC-ceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEE
Confidence 9999987 55555554 6999999999987755 667999999999999999998888865 467799999988887
Q ss_pred EEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC-----CCEEEEEeC-C-eEEEEECCC
Q 002591 765 AAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPS-----GELLASVSE-D-SVRVWTVGS 820 (903)
Q Consensus 765 ~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd-----g~~lasgs~-d-~I~iwdl~s 820 (903)
+++ +.|.+||+++++.+.+|.+|.++|.++.|.-+ |.+|.++.. + .+.+|-+..
T Consensus 161 ~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 161 TAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred ecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 765 68999999999999999999999999999876 676666543 3 678887765
No 256
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.24 E-value=1.7e-09 Score=124.48 Aligned_cols=211 Identities=12% Similarity=0.116 Sum_probs=138.2
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCe--EEEEEeCCC--cEEEEEcCCCeee--EEeecCceeEEEecCCC
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD--LICSCDGDG--EIRYWSINNGSCT--RVFKGGTAQMRFQPHLG 761 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~--ll~sgs~Dg--~I~iwDi~t~~~~--~~~~~~~~~v~~sp~~~ 761 (903)
.|.+.|.+. ...+.+......+.+-+|+|||.. ++++...+| .|++.++.+++.. ..+.+......|+|++.
T Consensus 166 ~l~~~d~dG--~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~ 243 (428)
T PRK01029 166 ELWSVDYDG--QNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKK 243 (428)
T ss_pred eEEEEcCCC--CCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCC
Confidence 566666653 344555556666778899999876 333555444 5778888877643 34556666789999999
Q ss_pred EEEEEEc-CC----eEEEEECCCC---eEEEEecCCCCCeEEEEEcCCCCEEEEEeC-C---eEEEEECCCCCCcceEEE
Q 002591 762 RYLAAAA-EN----VVSILDAETQ---ACRLSLQGHTKPIDSVCWDPSGELLASVSE-D---SVRVWTVGSGSEGECVHE 829 (903)
Q Consensus 762 ~ll~~s~-dg----~I~i~D~~t~---~~~~~l~~h~~~V~sl~~spdg~~lasgs~-d---~I~iwdl~s~~~~~~i~~ 829 (903)
.|+.... +| .+.+|++..+ ........+.......+|+|||+.|+..+. + .|+++++.... .....
T Consensus 244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g--~~~~~ 321 (428)
T PRK01029 244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEG--QSPRL 321 (428)
T ss_pred EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccc--cceEE
Confidence 9888764 22 3444676653 333333333344567899999997776653 3 35555554211 12233
Q ss_pred eecCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEec-C--CcEEEc
Q 002591 830 LSCNGNKFHSCVFHPTYPSLLVIGCY---QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASH-D--KFVKLW 902 (903)
Q Consensus 830 ~~~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~-D--G~I~IW 902 (903)
+......+....|+|||++|+..+.+ ..|++||+.+++...+......+....|+|||++|+.... + ..|++|
T Consensus 322 lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~v 400 (428)
T PRK01029 322 LTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLI 400 (428)
T ss_pred eccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEE
Confidence 33334566788999999999887654 3799999999988766655557788999999998775443 3 345554
No 257
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.24 E-value=4.7e-11 Score=134.36 Aligned_cols=278 Identities=15% Similarity=0.284 Sum_probs=196.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeEEecc-CCCCeEEEEECCCC--CEEEEEeCCCcEEEEeCCCC-
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDT-LKSKTNLEE-HSSLITDVRFSPSM--PRLATSSFDKTVRVWDADNP- 697 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t-~~~~~~l~~-h~~~V~~l~fspdg--~~Lasgs~Dg~I~IWDl~~~- 697 (903)
.+.+.++.++|.|+-+|+++.-| +.+.|++. +...+-+.. ..-.|-++.|++.. .+-++......-.||++...
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss 102 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS 102 (1081)
T ss_pred cCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence 45788899999999999998776 55667663 333333321 22347788887753 34555555566778988643
Q ss_pred -CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee-eE---EeecCceeEEEecCCCEEEEEEcCCeE
Q 002591 698 -GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC-TR---VFKGGTAQMRFQPHLGRYLAAAAENVV 772 (903)
Q Consensus 698 -~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~-~~---~~~~~~~~v~~sp~~~~ll~~s~dg~I 772 (903)
..+-..+.+|...|+.+.|+|....++++|+.|-.|..||+++... +. ........+.|+-....+++.+..+.|
T Consensus 103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i 182 (1081)
T KOG0309|consen 103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI 182 (1081)
T ss_pred ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence 2344567799999999999999999999999999999999998652 22 234567789999999999999999999
Q ss_pred EEEECCCC-eEEEEecCCCCCeEEEEEcCCC-CEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEE
Q 002591 773 SILDAETQ-ACRLSLQGHTKPIDSVCWDPSG-ELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSL 849 (903)
Q Consensus 773 ~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg-~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l 849 (903)
.+||++.+ .++..+++|...|..+.|..-- ..+.+++.| +|+.||....... -........+|..-.+.|-|.-.
T Consensus 183 ~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e--~~~~vtt~~piw~~r~~Pfg~g~ 260 (1081)
T KOG0309|consen 183 FVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTE--SKRTVTTNFPIWRGRYLPFGEGY 260 (1081)
T ss_pred EEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccc--cceeccccCcceeccccccCcee
Confidence 99999987 6788899999999999988633 356677777 9999999765321 11122224566666666655433
Q ss_pred EEEE--CCCeEEEE---------ECCCC-cEE-EEccCCCCEEEEEEecCCC----------EEEEEecCCcEEEcC
Q 002591 850 LVIG--CYQSLELW---------NMSEN-KTM-TLTAHEGLIAALAVSTETG----------YVASASHDKFVKLWK 903 (903)
Q Consensus 850 ~t~s--~dg~I~vw---------dl~~~-~~~-~~~~h~~~V~sl~~spdg~----------~LaSgs~DG~I~IWd 903 (903)
++-- .+..|.++ +..++ +.+ ++.+|.+.|..+.|-..+. .|+|.+.|..+++|.
T Consensus 261 ~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWp 337 (1081)
T KOG0309|consen 261 CIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWP 337 (1081)
T ss_pred EeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeee
Confidence 3222 12234443 33332 223 8889999998877743221 599999999999993
No 258
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.24 E-value=2.3e-09 Score=118.66 Aligned_cols=246 Identities=13% Similarity=0.229 Sum_probs=166.7
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC--EEEE-----EeCCCcEEEEeCCCCC-
Q 002591 627 ICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP--RLAT-----SSFDKTVRVWDADNPG- 698 (903)
Q Consensus 627 ~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~--~Las-----gs~Dg~I~IWDl~~~~- 698 (903)
++..|+.|..+.|- -..+.|.+|++...+.+ .-+-|...|+.+.++|... .||+ .+.-..|+||.+...+
T Consensus 129 W~~qfs~dEsl~ar-lv~nev~f~~~~~f~~~-~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~ 206 (566)
T KOG2315|consen 129 WVPQFSIDESLAAR-LVSNEVQFYDLGSFKTI-QHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQ 206 (566)
T ss_pred cccccccchhhhhh-hhcceEEEEecCCccce-eeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccc
Confidence 78999998764432 23567999998763322 2234678899999999743 3332 2445679999886311
Q ss_pred ---ceeEEeccCCCceEEEEecCCCCeEEEEEeC--C---------CcEEEEEcCCCeeeEEe--ecCceeEEEecCCCE
Q 002591 699 ---YSLRTFMGHSASVMSLDFHPNKDDLICSCDG--D---------GEIRYWSINNGSCTRVF--KGGTAQMRFQPHLGR 762 (903)
Q Consensus 699 ---~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~--D---------g~I~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ 762 (903)
...++|.. .+. ..+.|++.+.-+|+.++. | .+++++++...++...+ .+++.+++|++++..
T Consensus 207 ~~~~a~ksFFk-adk-vqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L~k~GPVhdv~W~~s~~E 284 (566)
T KOG2315|consen 207 HQPVANKSFFK-ADK-VQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPLLKEGPVHDVTWSPSGRE 284 (566)
T ss_pred cchhhhccccc-cce-eEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEecCCCCCceEEEECCCCCE
Confidence 11122221 222 347888887776654432 2 46888888855555544 478999999999988
Q ss_pred EEEEEc--CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCc
Q 002591 763 YLAAAA--ENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 763 ll~~s~--dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
|+++.. -..+.|||++. +++..+ .+++-+++-|+|.|++|+.++-+ .|.|||+.+. +++..+.. ..
T Consensus 285 F~VvyGfMPAkvtifnlr~-~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~---K~i~~~~a--~~ 356 (566)
T KOG2315|consen 285 FAVVYGFMPAKVTIFNLRG-KPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR---KLIAKFKA--AN 356 (566)
T ss_pred EEEEEecccceEEEEcCCC-CEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccch---hhcccccc--CC
Confidence 776554 67999999873 444444 45778899999999988887765 7999999874 55555543 33
Q ss_pred eEEEEEeCCCCEEEEEEC------CCeEEEEECCCCcEEEEccCCCCEEEEEEec
Q 002591 837 FHSCVFHPTYPSLLVIGC------YQSLELWNMSENKTMTLTAHEGLIAALAVST 885 (903)
Q Consensus 837 i~si~~sp~g~~l~t~s~------dg~I~vwdl~~~~~~~~~~h~~~V~sl~~sp 885 (903)
.+-+.|+|||.+|++++. |+.++||++....+.. .........++|-|
T Consensus 357 tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~~-~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 357 TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLHE-KMFKSELLQVEWRP 410 (566)
T ss_pred ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCceeeh-hhhhHhHhheeeee
Confidence 566799999999999986 5789999987654431 11111566667765
No 259
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.23 E-value=3.4e-08 Score=108.87 Aligned_cols=246 Identities=11% Similarity=0.114 Sum_probs=156.1
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeC----------CCcEEEEECCCCceeEEeccCC-------CCeEEEEEC
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGH----------DKKAVLWHTDTLKSKTNLEEHS-------SLITDVRFS 674 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~----------Dg~V~vWd~~t~~~~~~l~~h~-------~~V~~l~fs 674 (903)
+.+.+..+.....+-- + ++|||+.|+++.. +..|.|||+.+++.+..+.... ..-..++++
T Consensus 36 ~~~v~g~i~~G~~P~~-~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls 113 (352)
T TIGR02658 36 AGRVLGMTDGGFLPNP-V-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLT 113 (352)
T ss_pred CCEEEEEEEccCCCce-e-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEEC
Confidence 4556666664444333 4 9999998887765 6899999999999999887422 234578999
Q ss_pred CCCCEEEEEeC--CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC-Cee-e---EEe
Q 002591 675 PSMPRLATSSF--DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN-GSC-T---RVF 747 (903)
Q Consensus 675 pdg~~Lasgs~--Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t-~~~-~---~~~ 747 (903)
+||++|++... +..|.++|+.+ ++.+..+.- .++..-+..+.+ .+++ -| .||......+.. ++. . ..|
T Consensus 114 ~dgk~l~V~n~~p~~~V~VvD~~~-~kvv~ei~v-p~~~~vy~t~e~-~~~~-~~-~Dg~~~~v~~d~~g~~~~~~~~vf 188 (352)
T TIGR02658 114 PDNKTLLFYQFSPSPAVGVVDLEG-KAFVRMMDV-PDCYHIFPTAND-TFFM-HC-RDGSLAKVGYGTKGNPKIKPTEVF 188 (352)
T ss_pred CCCCEEEEecCCCCCEEEEEECCC-CcEEEEEeC-CCCcEEEEecCC-ccEE-Ee-ecCceEEEEecCCCceEEeeeeee
Confidence 99999998763 78999999998 666665553 222222222222 1111 22 244444433322 111 1 111
Q ss_pred ecC-----ceeEEEec-CCCEEEEEEcCCeEEEEECCC-----CeEEEEecC-------CCCCeEEEEEcCCCCEEEEEe
Q 002591 748 KGG-----TAQMRFQP-HLGRYLAAAAENVVSILDAET-----QACRLSLQG-------HTKPIDSVCWDPSGELLASVS 809 (903)
Q Consensus 748 ~~~-----~~~v~~sp-~~~~ll~~s~dg~I~i~D~~t-----~~~~~~l~~-------h~~~V~sl~~spdg~~lasgs 809 (903)
... ... .+.+ ++..+++ +.+|.|++.|+.. .+....+.. ..+.+.-++++++++.++...
T Consensus 189 ~~~~~~v~~rP-~~~~~dg~~~~v-s~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~ 266 (352)
T TIGR02658 189 HPEDEYLINHP-AYSNKSGRLVWP-TYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLA 266 (352)
T ss_pred cCCccccccCC-ceEcCCCcEEEE-ecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEe
Confidence 110 111 3455 5544444 4459999999543 333332221 223345599999999777642
Q ss_pred ----------C-CeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCC-EEEEEE-CCCeEEEEECCCCcEEE
Q 002591 810 ----------E-DSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYP-SLLVIG-CYQSLELWNMSENKTMT 870 (903)
Q Consensus 810 ----------~-d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~-~l~t~s-~dg~I~vwdl~~~~~~~ 870 (903)
. +.|.++|..+. +.+..+.. +..+..+++++|++ +|++.. .++.|.++|..+++.+.
T Consensus 267 ~~~~~~thk~~~~~V~ViD~~t~---kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~ 336 (352)
T TIGR02658 267 DQRAKWTHKTASRFLFVVDAKTG---KRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELS 336 (352)
T ss_pred cCCccccccCCCCEEEEEECCCC---eEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEe
Confidence 1 37999999887 55555544 66899999999999 777776 46889999999998873
No 260
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.22 E-value=5.7e-10 Score=114.36 Aligned_cols=241 Identities=19% Similarity=0.225 Sum_probs=167.8
Q ss_pred CCCCeEEEEEcC---CCC-EEEEEeCCCcEEEEECCCCceeEEeccCC------CCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 622 STSKVICCHFSS---DGK-LLATGGHDKKAVLWHTDTLKSKTNLEEHS------SLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 622 H~~~V~~l~fsp---dg~-~Latgs~Dg~V~vWd~~t~~~~~~l~~h~------~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
.+..+..+.|.. +|. .|+-+..+|.|.+|..........+++-. ....++.|++.+..++++..+|.+.+
T Consensus 68 dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~ 147 (339)
T KOG0280|consen 68 DTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISG 147 (339)
T ss_pred cccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEE
Confidence 445667777753 455 56677788999999876544444444321 13567889999999999999999985
Q ss_pred EeCCC-CCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCC
Q 002591 692 WDADN-PGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAEN 770 (903)
Q Consensus 692 WDl~~-~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg 770 (903)
-+... .-+.+..++.|...++...|+....+++++|++|+.+..||++..+ ...+.
T Consensus 148 v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~-~~i~~---------------------- 204 (339)
T KOG0280|consen 148 VYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK-TFIWH---------------------- 204 (339)
T ss_pred EecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCc-ceeee----------------------
Confidence 55443 1223447889999999999998888899999999999999998332 11111
Q ss_pred eEEEEECCCCeEEEEecCCCCCeEEEEEcC-CCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCC-
Q 002591 771 VVSILDAETQACRLSLQGHTKPIDSVCWDP-SGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYP- 847 (903)
Q Consensus 771 ~I~i~D~~t~~~~~~l~~h~~~V~sl~~sp-dg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~- 847 (903)
..+.|...|.+|.-+| .+.+|++|+.| .|++||.++-. +.+..... .+.|..+.++|.-.
T Consensus 205 --------------n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~--kPl~~~~v-~GGVWRi~~~p~~~~ 267 (339)
T KOG0280|consen 205 --------------NSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMG--KPLFKAKV-GGGVWRIKHHPEIFH 267 (339)
T ss_pred --------------cceeeecceEEEecCCCCCceEEEeccccceeeeehhccc--CccccCcc-ccceEEEEecchhhh
Confidence 0123778888888776 46699999999 99999998643 33333222 47899999998543
Q ss_pred EEEEEECCCeEEEEECCCCcEE------EEccCCCCEEEEEEecCCCEEEEEe-cCCcEE-Ec
Q 002591 848 SLLVIGCYQSLELWNMSENKTM------TLTAHEGLIAALAVSTETGYVASAS-HDKFVK-LW 902 (903)
Q Consensus 848 ~l~t~s~dg~I~vwdl~~~~~~------~~~~h~~~V~sl~~spdg~~LaSgs-~DG~I~-IW 902 (903)
.+++++..+-.+|.+++.+... ....|.+.+..-.|.....+|+||+ .|+.|+ +|
T Consensus 268 ~lL~~CMh~G~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~W 330 (339)
T KOG0280|consen 268 RLLAACMHNGAKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLW 330 (339)
T ss_pred HHHHHHHhcCceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeee
Confidence 3445555555667766554321 4557888888888865556788876 577755 76
No 261
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=7.1e-11 Score=128.69 Aligned_cols=278 Identities=18% Similarity=0.228 Sum_probs=190.1
Q ss_pred eeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-------CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCC
Q 002591 615 EANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD-------TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDK 687 (903)
Q Consensus 615 ~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~-------t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg 687 (903)
....+.+|...|..++--.+.+.+++++.|++|++|.++ +..+..++..|+.+|.++.|-.+.++++++ ||
T Consensus 727 rL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~ 804 (1034)
T KOG4190|consen 727 RLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG 804 (1034)
T ss_pred eeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC
Confidence 345688999999999888888899999999999999876 234677888999999999999998888765 88
Q ss_pred cEEEEeCCCCCceeEEec--cCCCceEEEEecCC--CCeEEEEEeCCCcEEEEEcCCCeeeEEee--------cCceeEE
Q 002591 688 TVRVWDADNPGYSLRTFM--GHSASVMSLDFHPN--KDDLICSCDGDGEIRYWSINNGSCTRVFK--------GGTAQMR 755 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~--~h~~~V~sl~fsp~--~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--------~~~~~v~ 755 (903)
-|.+||.-- +..+.... ...+.+..+...++ ...+++.|+...+|+++|.+..+.+..++ .-+.+++
T Consensus 805 giHlWDPFi-gr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~ia 883 (1034)
T KOG4190|consen 805 GIHLWDPFI-GRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIA 883 (1034)
T ss_pred cceeecccc-cchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEE
Confidence 899999764 33322111 11222333333333 34455566889999999999887655443 2356788
Q ss_pred EecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEE-EECCCCCCcceEEEeecC
Q 002591 756 FQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRV-WTVGSGSEGECVHELSCN 833 (903)
Q Consensus 756 ~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~i-wdl~s~~~~~~i~~~~~~ 833 (903)
+.+.|++++++-+.|.|.+.|.++|+.+..+...+.....++ .|....++....| ++.+ |....+ ......+..
T Consensus 884 Va~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldg---imh~q~kpp 959 (1034)
T KOG4190|consen 884 VADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDG---IMHLQDKPP 959 (1034)
T ss_pred eccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCC---eeeeccCCC
Confidence 999999999999999999999999999887765554444443 2445566666666 7777 876544 111111111
Q ss_pred CCceEEEEEeCCCCEEEEEECCCeEEEEECCCC-------cEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 834 GNKFHSCVFHPTYPSLLVIGCYQSLELWNMSEN-------KTMTLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 834 ~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~-------~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
..+.. -.-.-|..++++.....+.||.-... ..+.-....+..++++.-|-+.-++.|.+.|.|.+
T Consensus 960 pepah--flqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 960 PEPAH--FLQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred Ccchh--hhhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence 11110 11123566788777778888843211 11122345677888888887777888999998876
No 262
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.21 E-value=2.5e-09 Score=117.00 Aligned_cols=274 Identities=16% Similarity=0.189 Sum_probs=188.4
Q ss_pred eEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCC---------
Q 002591 617 NSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDK--------- 687 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg--------- 687 (903)
..+..-.-++..++|||.|++|++.... -|.+|+...+..+..+. | ..|..+.|+|+++||++=+...
T Consensus 26 ~~~~~~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~s 102 (561)
T COG5354 26 TRFESENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEIS 102 (561)
T ss_pred ccccccCcchhheeecCcchheehhhcc-ceEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccC
Confidence 3444466789999999999999987655 49999988766555553 3 3599999999999999875433
Q ss_pred ------cEEEEeCCCCCceeEEeccCCCc--eE-EEEecCCCCeEEEEEeCCCcEEEEEcCCCee----eEEee-cCcee
Q 002591 688 ------TVRVWDADNPGYSLRTFMGHSAS--VM-SLDFHPNKDDLICSCDGDGEIRYWSINNGSC----TRVFK-GGTAQ 753 (903)
Q Consensus 688 ------~I~IWDl~~~~~~~~~~~~h~~~--V~-sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~----~~~~~-~~~~~ 753 (903)
.+.+||+.+ +.++..+..-..+ .+ -+.|+-++.+.+-. ....++|+++ +... .+.++ .++..
T Consensus 103 p~~~~n~~~vwd~~s-g~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv--v~~sl~i~e~-t~n~~~~p~~~lr~~gi~d 178 (561)
T COG5354 103 PFTSKNNVFVWDIAS-GMIVFSFNGISQPYLGWPVLKFSIDDKYVARV--VGSSLYIHEI-TDNIEEHPFKNLRPVGILD 178 (561)
T ss_pred CccccCceeEEeccC-ceeEeeccccCCcccccceeeeeecchhhhhh--ccCeEEEEec-CCccccCchhhccccceee
Confidence 499999998 7788888876655 55 67888776544323 2457999997 3321 22233 46677
Q ss_pred EEEecCCC--EEEEE-----EcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEe------------CCeEE
Q 002591 754 MRFQPHLG--RYLAA-----AAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVS------------EDSVR 814 (903)
Q Consensus 754 v~~sp~~~--~ll~~-----s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs------------~d~I~ 814 (903)
..|+|.++ .|++- ...+.++||.+...+.+.+..-....-..+.|.+.|++|++-. +..++
T Consensus 179 FsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLy 258 (561)
T COG5354 179 FSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLY 258 (561)
T ss_pred EEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEE
Confidence 78888743 23332 2357899999887766654433333345678999998665421 12578
Q ss_pred EEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEE--CCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEE
Q 002591 815 VWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIG--CYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVAS 892 (903)
Q Consensus 815 iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s--~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaS 892 (903)
|+++... .+.......++|..++|.|.++.+++++ ..-.+.++|++.+ +.+......=+.+.|+|.+++++.
T Consensus 259 l~~~~e~----~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r~il~ 332 (561)
T COG5354 259 LLRITER----SIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPEQKRNTIFFSPHERYILF 332 (561)
T ss_pred EEeeccc----ccceeccccccceeeeecccCCceeEEecccccceeecccccc--eEEecCCcccccccccCcccEEEE
Confidence 8888632 2222224478999999999998888777 3458999999887 444455555667778888888888
Q ss_pred EecC---CcEEEcC
Q 002591 893 ASHD---KFVKLWK 903 (903)
Q Consensus 893 gs~D---G~I~IWd 903 (903)
++-| |.|.||+
T Consensus 333 agF~nl~gni~i~~ 346 (561)
T COG5354 333 AGFDNLQGNIEIFD 346 (561)
T ss_pred ecCCccccceEEec
Confidence 7755 4566664
No 263
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.20 E-value=9.7e-09 Score=116.87 Aligned_cols=253 Identities=14% Similarity=0.070 Sum_probs=160.9
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCce--
Q 002591 634 DGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASV-- 711 (903)
Q Consensus 634 dg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V-- 711 (903)
++..+++++.++.|+.||.++++.+............... .+..++.++.++.|+.||.++ ++.+..+......+
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~t-G~~~W~~~~~~~~~~~ 180 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPLV--ANGLVVVRTNDGRLTALDAAT-GERLWTYSRVTPALTL 180 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCEE--ECCEEEEECCCCeEEEEEcCC-CceeeEEccCCCceee
Confidence 4567888889999999999999988776543321111112 245777788899999999987 55555444322211
Q ss_pred ---EEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCc----e------eEE--EecCCCEEEEEEcCCeEEEEE
Q 002591 712 ---MSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGT----A------QMR--FQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 712 ---~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~----~------~v~--~sp~~~~ll~~s~dg~I~i~D 776 (903)
.+..+. ++ .++.+..+|.|..+|+++++.+....... . .+. ..-.++.+++++.++.++.||
T Consensus 181 ~~~~sp~~~--~~-~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d 257 (377)
T TIGR03300 181 RGSASPVIA--DG-GVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALD 257 (377)
T ss_pred cCCCCCEEE--CC-EEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEE
Confidence 111122 23 45577888999999999998765432110 0 010 111357888888999999999
Q ss_pred CCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecC-CCceEEEEEeCCCCEEEEEEC
Q 002591 777 AETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCN-GNKFHSCVFHPTYPSLLVIGC 854 (903)
Q Consensus 777 ~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~-~~~i~si~~sp~g~~l~t~s~ 854 (903)
.++++.+...... ....... ++..|++++.+ .|..+|..+++. +...... ......... .+.+|++++.
T Consensus 258 ~~tG~~~W~~~~~--~~~~p~~--~~~~vyv~~~~G~l~~~d~~tG~~---~W~~~~~~~~~~ssp~i--~g~~l~~~~~ 328 (377)
T TIGR03300 258 LRSGRVLWKRDAS--SYQGPAV--DDNRLYVTDADGVVVALDRRSGSE---LWKNDELKYRQLTAPAV--VGGYLVVGDF 328 (377)
T ss_pred CCCCcEEEeeccC--CccCceE--eCCEEEEECCCCeEEEEECCCCcE---EEccccccCCccccCEE--ECCEEEEEeC
Confidence 9999888766521 1122222 35566666666 999999988742 3222111 111222222 4568999999
Q ss_pred CCeEEEEECCCCcEE-EEccCCCCEEE-EEEecCCCEEEEEecCCcEEEcC
Q 002591 855 YQSLELWNMSENKTM-TLTAHEGLIAA-LAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 855 dg~I~vwdl~~~~~~-~~~~h~~~V~s-l~~spdg~~LaSgs~DG~I~IWd 903 (903)
+|.|+++|..+++.+ .+..+...+.. .++ .++ .|+.++.||.|+.|.
T Consensus 329 ~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~-~~~-~l~v~~~dG~l~~~~ 377 (377)
T TIGR03300 329 EGYLHWLSREDGSFVARLKTDGSGIASPPVV-VGD-GLLVQTRDGDLYAFR 377 (377)
T ss_pred CCEEEEEECCCCCEEEEEEcCCCccccCCEE-ECC-EEEEEeCCceEEEeC
Confidence 999999999999988 55545543333 333 333 588889999998874
No 264
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.18 E-value=2.2e-08 Score=108.45 Aligned_cols=285 Identities=14% Similarity=0.144 Sum_probs=188.4
Q ss_pred CCCCcccccccCc-ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCceeEEeccCCCCeEEEEECCC
Q 002591 599 DAGGRGMDVSQGF-SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTD-TLKSKTNLEEHSSLITDVRFSPS 676 (903)
Q Consensus 599 ~~~~~~~d~~~~~-~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~-t~~~~~~l~~h~~~V~~l~fspd 676 (903)
...+..|....+- +|+.+..+.+|-..-.-+ .++..+....||.=.||.++ .|+-++..+..+ .-.+-..+.|
T Consensus 203 GtrGklWis~d~g~tFeK~vdl~~~vS~PmIV----~~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFt-dYY~R~~nsD 277 (668)
T COG4946 203 GTRGKLWISSDGGKTFEKFVDLDGNVSSPMIV----GERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFT-DYYPRNANSD 277 (668)
T ss_pred CccceEEEEecCCcceeeeeecCCCcCCceEE----cceEEEEecccCccceEEeccCCchhhhcCCch-hccccccCCC
Confidence 3445566666544 788888887775432211 12333344567666666654 343333222111 1223334678
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCceeEEec-----cC--C---CceEEEE-ecCCCCeEEEEEeCCCcEEEEEcCCCeeeE
Q 002591 677 MPRLATSSFDKTVRVWDADNPGYSLRTFM-----GH--S---ASVMSLD-FHPNKDDLICSCDGDGEIRYWSINNGSCTR 745 (903)
Q Consensus 677 g~~Lasgs~Dg~I~IWDl~~~~~~~~~~~-----~h--~---~~V~sl~-fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~ 745 (903)
|+.|+... .|.|.+||.++.......+. .. . .++.-+. |++-...+++..+ .|...|.+...+-.+.
T Consensus 278 GkrIvFq~-~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi~~~~~~~~iq 355 (668)
T COG4946 278 GKRIVFQN-AGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFIMRPWDGYSIQ 355 (668)
T ss_pred CcEEEEec-CCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEEECCCCCeeEE
Confidence 88877654 57799999987432111111 00 0 1111111 4444445666666 5888888877666555
Q ss_pred Ee-ecCceeEEEecCCCEEEEEEcCC-eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCC
Q 002591 746 VF-KGGTAQMRFQPHLGRYLAAAAEN-VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGS 822 (903)
Q Consensus 746 ~~-~~~~~~v~~sp~~~~ll~~s~dg-~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~ 822 (903)
.- ++.+.-..+..+...++.+..|| .+-|||.++++... +...-+.|.++..+++|++++.+.+. .|.++|+.++.
T Consensus 356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr-~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKR-IEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEE-eeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 43 34566677777778888899888 89999999887554 44467889999999999999988888 99999999873
Q ss_pred CcceEEEeecCCCceEEEEEeCCCCEEEEEECCC----eEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEe
Q 002591 823 EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ----SLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASAS 894 (903)
Q Consensus 823 ~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg----~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs 894 (903)
....-....+-|+.+.|||++++|+.+--+| .|++||+.+++........+.=.+-+|.||+++|.--+
T Consensus 435 ---v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 435 ---VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYFLS 507 (668)
T ss_pred ---eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEEEe
Confidence 2222334467799999999999999987776 79999999999987666666666778999999876544
No 265
>KOG4594 consensus Sequence-specific single-stranded-DNA-binding protein [Replication, recombination and repair; Transcription; General function prediction only]
Probab=99.17 E-value=1.5e-11 Score=124.06 Aligned_cols=66 Identities=32% Similarity=0.758 Sum_probs=56.5
Q ss_pred chhhHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCCCCCcccCCCCCcchHhHHHHHHHHHhhhccc
Q 002591 4 TNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWDIFIARTNEK 70 (903)
Q Consensus 4 ~~~~~~~~l~~yiydyl~~~~~~~~a~a~~~e~~~~~~~~~~d~~~~fL~eWw~~fwdif~a~~~~~ 70 (903)
+.-.|||.|..||||||++-++.++|+.|+.|-....+ ...-.+.+||.+|||||||+|.|.-.++
T Consensus 12 Sd~qArekLa~YvYEYLlhvgaqksaqtflseirwekn-itlge~p~FLhsWWcvFwDLYcAAPeRR 77 (354)
T KOG4594|consen 12 SDSQAREKLALYVYEYLLHVGAQKSAQTFLSEIRWEKN-ITLGEPPGFLHSWWCVFWDLYCAAPERR 77 (354)
T ss_pred cchhHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHhhh-hhccCCcchhhhhHHHHHHHhhcCcccc
Confidence 34579999999999999999999999999999775544 5567888999999999999998765443
No 266
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.16 E-value=6.7e-08 Score=102.74 Aligned_cols=259 Identities=11% Similarity=0.106 Sum_probs=177.3
Q ss_pred CCcEEEEECCCCc--e-eEEeccCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCceeEEec---cCCCceEEE
Q 002591 644 DKKAVLWHTDTLK--S-KTNLEEHSSLITDVRFSPSMPRLATSSF---DKTVRVWDADNPGYSLRTFM---GHSASVMSL 714 (903)
Q Consensus 644 Dg~V~vWd~~t~~--~-~~~l~~h~~~V~~l~fspdg~~Lasgs~---Dg~I~IWDl~~~~~~~~~~~---~h~~~V~sl 714 (903)
+.-|++|++++.. . ...+-.+...++-|+|+++.++|+++.. +|.|..|.++...-.+..+. ....+-+.+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 4569999987322 1 1223356778999999999999988855 57888888875322222221 122333679
Q ss_pred EecCCCCeEEEEEeCCCcEEEEEcCC-CeeeEE---e------------ecCceeEEEecCCCEEEEEEc-CCeEEEEEC
Q 002591 715 DFHPNKDDLICSCDGDGEIRYWSINN-GSCTRV---F------------KGGTAQMRFQPHLGRYLAAAA-ENVVSILDA 777 (903)
Q Consensus 715 ~fsp~~~~ll~sgs~Dg~I~iwDi~t-~~~~~~---~------------~~~~~~v~~sp~~~~ll~~s~-dg~I~i~D~ 777 (903)
++++++..++++...-|.|.++-+.. |..... + ..+.....+.|++++++++.- ...|.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 99999988887777789999999965 432211 1 123566789999999888876 478999999
Q ss_pred CCCeEEEEec---CCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCC-CCcceEEEeec------CCCceEEEEEeCC
Q 002591 778 ETQACRLSLQ---GHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSG-SEGECVHELSC------NGNKFHSCVFHPT 845 (903)
Q Consensus 778 ~t~~~~~~l~---~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~-~~~~~i~~~~~------~~~~i~si~~sp~ 845 (903)
..++....-. .....-+.|.|+|++++.++.++= +|.+|.+... .+.+.+..+.. .......|..+++
T Consensus 175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~d 254 (346)
T COG2706 175 DDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPD 254 (346)
T ss_pred ccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCC
Confidence 9876543221 233456789999999977776653 9999999874 23333333221 2445778899999
Q ss_pred CCEEEEEECC-CeEEEEECCC--CcEE---EEccCCCCEEEEEEecCCCEEEEEecCC-cEEEc
Q 002591 846 YPSLLVIGCY-QSLELWNMSE--NKTM---TLTAHEGLIAALAVSTETGYVASASHDK-FVKLW 902 (903)
Q Consensus 846 g~~l~t~s~d-g~I~vwdl~~--~~~~---~~~~h~~~V~sl~~spdg~~LaSgs~DG-~I~IW 902 (903)
|++|+++... ..|.+|.+.. +++. ....+....+.+.|++.+++|+++..|+ .|.+|
T Consensus 255 GrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf 318 (346)
T COG2706 255 GRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVF 318 (346)
T ss_pred CCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEE
Confidence 9999887653 4888887754 3333 2334555688999999999999888654 56665
No 267
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.15 E-value=1.1e-08 Score=112.73 Aligned_cols=270 Identities=14% Similarity=0.202 Sum_probs=185.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC-----------CCcEEEEe
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF-----------DKTVRVWD 693 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~-----------Dg~I~IWD 693 (903)
.-+-+.|||.|.||+|--.-| |.+|--++...+..|. |. .|.-+.|||+.+||+|-+. ...|+|||
T Consensus 212 Tetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWD 288 (698)
T KOG2314|consen 212 TETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWD 288 (698)
T ss_pred eeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEE
Confidence 346789999999999986655 8899876666666663 44 4899999999999998753 25699999
Q ss_pred CCCCCceeEEecc--CCCce-EEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE--Eee-cCceeEEEecCCCEEEEEE
Q 002591 694 ADNPGYSLRTFMG--HSASV-MSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR--VFK-GGTAQMRFQPHLGRYLAAA 767 (903)
Q Consensus 694 l~~~~~~~~~~~~--h~~~V-~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~--~~~-~~~~~v~~sp~~~~ll~~s 767 (903)
+.+ +...+.|.. ....+ .-+.|+.|+.++... ....|.||+.....++. .++ .++....|+|.+..|+.-.
T Consensus 289 I~t-G~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm--~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwt 365 (698)
T KOG2314|consen 289 IAT-GLLKRSFPVIKSPYLKWPIFRWSHDDKYFARM--TGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWT 365 (698)
T ss_pred ccc-cchhcceeccCCCccccceEEeccCCceeEEe--ccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEc
Confidence 998 666666654 22222 346899987754432 23779999987654332 222 3677788999977776654
Q ss_pred cC-----CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-----------eEEEEECCCCCCcceEEEee
Q 002591 768 AE-----NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-----------SVRVWTVGSGSEGECVHELS 831 (903)
Q Consensus 768 ~d-----g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-----------~I~iwdl~s~~~~~~i~~~~ 831 (903)
.+ ..+.+..+.++..+++..-+.-.=..+.|-.+|++|+.--+. .+.|+.++...-......+
T Consensus 366 pe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~vel- 444 (698)
T KOG2314|consen 366 PETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVEL- 444 (698)
T ss_pred ccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeec-
Confidence 42 378888888887777665554444556788888888754221 4667777654322222222
Q ss_pred cCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCC-CcEEEE--ccCCCCEEEEEEecCCCEEEEEe---cCCcEEEc
Q 002591 832 CNGNKFHSCVFHPTYPSLLVIGCY---QSLELWNMSE-NKTMTL--TAHEGLIAALAVSTETGYVASAS---HDKFVKLW 902 (903)
Q Consensus 832 ~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwdl~~-~~~~~~--~~h~~~V~sl~~spdg~~LaSgs---~DG~I~IW 902 (903)
...|...+|-|.|+.+++.+.. .+|.+|.+++ .....+ .-.....+.+.|+|.|++++.+. ..|.+.++
T Consensus 445 --ke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~ 522 (698)
T KOG2314|consen 445 --KESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFY 522 (698)
T ss_pred --chheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEE
Confidence 4578899999999998887765 4899998873 222211 12235678899999999988764 45677776
Q ss_pred C
Q 002591 903 K 903 (903)
Q Consensus 903 d 903 (903)
|
T Consensus 523 D 523 (698)
T KOG2314|consen 523 D 523 (698)
T ss_pred e
Confidence 5
No 268
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.14 E-value=1.6e-09 Score=111.21 Aligned_cols=196 Identities=21% Similarity=0.241 Sum_probs=143.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee--EEeccCCCCeEEEEECCCC-CEEEEEeCCCcEEEEeCCCCCcee
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSK--TNLEEHSSLITDVRFSPSM-PRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~--~~l~~h~~~V~~l~fspdg-~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
...++.|++.+.-++++..+|.+.+-+....... .+++.|...++...|+... +++++|+.|+.+..||++.++..+
T Consensus 123 ~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i 202 (339)
T KOG0280|consen 123 EALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFI 202 (339)
T ss_pred eeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCccee
Confidence 4568889999999999999999996665544444 4889999999999997643 588999999999999999655554
Q ss_pred EE-eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC-CeeeEE--eecCceeEEEecCC-CEEEEEEcCCeEEEEE
Q 002591 702 RT-FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN-GSCTRV--FKGGTAQMRFQPHL-GRYLAAAAENVVSILD 776 (903)
Q Consensus 702 ~~-~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t-~~~~~~--~~~~~~~v~~sp~~-~~ll~~s~dg~I~i~D 776 (903)
.. ...|...|.+|.-+|..+.+|+||+.|-.|++||.++ ++.+.. ..+++-.++.+|.. ..+++++.-+..+|.+
T Consensus 203 ~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G~ki~~ 282 (339)
T KOG0280|consen 203 WHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNGAKILD 282 (339)
T ss_pred eecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcCceEEE
Confidence 44 6679999999999998888999999999999999994 454432 34677888888765 3455555555666666
Q ss_pred CCCC--e---EEEEecCCCCCeEEEEEcCCCCEEEEEeC-C-eEE-EEECCC
Q 002591 777 AETQ--A---CRLSLQGHTKPIDSVCWDPSGELLASVSE-D-SVR-VWTVGS 820 (903)
Q Consensus 777 ~~t~--~---~~~~l~~h~~~V~sl~~spdg~~lasgs~-d-~I~-iwdl~s 820 (903)
.... + .....+.|.+-+..-.|.....+|++++. | .++ +|-.-+
T Consensus 283 ~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t 334 (339)
T KOG0280|consen 283 SSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHIT 334 (339)
T ss_pred ecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeecc
Confidence 5544 2 33444567777777777555457887652 3 433 664433
No 269
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.14 E-value=1.4e-09 Score=113.40 Aligned_cols=238 Identities=18% Similarity=0.264 Sum_probs=155.2
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCc----eeEEeccCC------------CceEEEEecCCCCe-EEEE
Q 002591 664 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGY----SLRTFMGHS------------ASVMSLDFHPNKDD-LICS 726 (903)
Q Consensus 664 h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~----~~~~~~~h~------------~~V~sl~fsp~~~~-ll~s 726 (903)
..+-|.+|.|...|.+||+|+.+|.|.+|.-+...+ ....+..|. ..|..|.|.++++. .++.
T Consensus 24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 345689999999999999999999999997654332 223333332 45888999887543 4446
Q ss_pred EeCCCcEEEEEcCCCeee-----------------------------------EEee----cCceeEEEecCCCEEEEEE
Q 002591 727 CDGDGEIRYWSINNGSCT-----------------------------------RVFK----GGTAQMRFQPHLGRYLAAA 767 (903)
Q Consensus 727 gs~Dg~I~iwDi~t~~~~-----------------------------------~~~~----~~~~~v~~sp~~~~ll~~s 767 (903)
...|.+|++|.+...... +++. .++.++.+..+...++ .+
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~l-SA 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFL-SA 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEe-ec
Confidence 778999999998643211 1111 1345566666655554 45
Q ss_pred cCCeEEEEECCCCeE---EEEecCC-----CCCeEEEEEcCCCC--EEEEEeCCeEEEEECCCCCCc----ce-------
Q 002591 768 AENVVSILDAETQAC---RLSLQGH-----TKPIDSVCWDPSGE--LLASVSEDSVRVWTVGSGSEG----EC------- 826 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~---~~~l~~h-----~~~V~sl~~spdg~--~lasgs~d~I~iwdl~s~~~~----~~------- 826 (903)
.|-.|.+|.++--.. +..++.+ ...|++..|+|... ++++.+.++|++.|++..... +.
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp 262 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDP 262 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhhccccCC
Confidence 577899998874322 2222322 24588999999543 444555559999999843110 00
Q ss_pred --EEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC-CCcEE-EEccCC------------CCE---EEEEEecCC
Q 002591 827 --VHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS-ENKTM-TLTAHE------------GLI---AALAVSTET 887 (903)
Q Consensus 827 --i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~-~~~~~-~~~~h~------------~~V---~sl~~spdg 887 (903)
...+..-...|..+.|+.+|+++++-. .-+|+|||++ +.+.+ +..-|. +.| ..++|+-++
T Consensus 263 ~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~ 341 (433)
T KOG1354|consen 263 SSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND 341 (433)
T ss_pred cchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence 111111234578899999999888643 3589999983 34433 444443 223 357888899
Q ss_pred CEEEEEecCCcEEEcC
Q 002591 888 GYVASASHDKFVKLWK 903 (903)
Q Consensus 888 ~~LaSgs~DG~I~IWd 903 (903)
.+++||+....+++|+
T Consensus 342 ~~v~TGsy~n~frvf~ 357 (433)
T KOG1354|consen 342 SYVMTGSYNNVFRVFN 357 (433)
T ss_pred ceEecccccceEEEec
Confidence 9999999999999885
No 270
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.11 E-value=2.6e-08 Score=113.29 Aligned_cols=252 Identities=15% Similarity=0.093 Sum_probs=159.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEE
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSL 714 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl 714 (903)
+..|++++.++.|..+|..+++.+..+.........+.. ++..+++++.++.|..+|..+ ++.+...... ..+.+.
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~t-G~~~W~~~~~-~~~~~~ 140 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAED-GKELWRAKLS-SEVLSP 140 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCC-CcEeeeeccC-ceeecC
Confidence 568888889999999999999988776654432223332 466888888999999999987 5555444322 222221
Q ss_pred EecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEE------EecCCCEEEEEEcCCeEEEEECCCCeEEEEecC
Q 002591 715 DFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMR------FQPHLGRYLAAAAENVVSILDAETQACRLSLQG 788 (903)
Q Consensus 715 ~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~------~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~ 788 (903)
... .++.+ +.++.+|.|+.||.++++.+..++.....+. ..-.++.++++..++.+..+|.++++.+.....
T Consensus 141 p~v-~~~~v-~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~~~W~~~~ 218 (377)
T TIGR03300 141 PLV-ANGLV-VVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQPLWEQRV 218 (377)
T ss_pred CEE-ECCEE-EEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCCEeeeecc
Confidence 111 13434 4677799999999999998776654321110 011235777888889999999999987765432
Q ss_pred CCC----C------e-EEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC
Q 002591 789 HTK----P------I-DSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ 856 (903)
Q Consensus 789 h~~----~------V-~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg 856 (903)
... . + .+..+ .+..+++++.+ .++.||..+++ .+..... ....... ..+..+++++.+|
T Consensus 219 ~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~---~~W~~~~--~~~~~p~--~~~~~vyv~~~~G 289 (377)
T TIGR03300 219 ALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGR---VLWKRDA--SSYQGPA--VDDNRLYVTDADG 289 (377)
T ss_pred ccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCCCc---EEEeecc--CCccCce--EeCCEEEEECCCC
Confidence 100 0 0 11112 24456666656 99999998874 3322221 1111122 2466788889999
Q ss_pred eEEEEECCCCcEEEEc-cC-CCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 857 SLELWNMSENKTMTLT-AH-EGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 857 ~I~vwdl~~~~~~~~~-~h-~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.|+.+|..+++.+... .. ...+.+... .+.+|++++.||.|++||
T Consensus 290 ~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d 336 (377)
T TIGR03300 290 VVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLS 336 (377)
T ss_pred eEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEE
Confidence 9999999999877322 21 122222222 356888899999998875
No 271
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.11 E-value=6.3e-08 Score=120.32 Aligned_cols=280 Identities=16% Similarity=0.231 Sum_probs=184.2
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEE----ECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCC-
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLW----HTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDAD- 695 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vW----d~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~- 695 (903)
...+.|.++.|-++...|+.+..+|.|.++ |..+. .+.....-...|.|++||||+..|+....+++|.+.+.+
T Consensus 73 ~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~-~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f 151 (928)
T PF04762_consen 73 DPNDKIVSFQYLADSESLCIALASGDIILVREDPDPDED-EIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDF 151 (928)
T ss_pred CCCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCc-eeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence 346789999999999999999999999999 44432 233333456789999999999999999989988776431
Q ss_pred -----------CCC----------ceeEEecc------------------------CCCceEEEEecCCCCeEEEEEe--
Q 002591 696 -----------NPG----------YSLRTFMG------------------------HSASVMSLDFHPNKDDLICSCD-- 728 (903)
Q Consensus 696 -----------~~~----------~~~~~~~~------------------------h~~~V~sl~fsp~~~~ll~sgs-- 728 (903)
..+ +.-..|.| +.+.-..|+|-.||.++.++.-
T Consensus 152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~ 231 (928)
T PF04762_consen 152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEP 231 (928)
T ss_pred eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEc
Confidence 000 00000100 2334566999999887665443
Q ss_pred CC---CcEEEEEcCCCeeeEEee---cCceeEEEecCCCEEEEEEc---CCeEEEEECCC---CeEEEEecCCCCCeEEE
Q 002591 729 GD---GEIRYWSINNGSCTRVFK---GGTAQMRFQPHLGRYLAAAA---ENVVSILDAET---QACRLSLQGHTKPIDSV 796 (903)
Q Consensus 729 ~D---g~I~iwDi~t~~~~~~~~---~~~~~v~~sp~~~~ll~~s~---dg~I~i~D~~t---~~~~~~l~~h~~~V~sl 796 (903)
.+ ..||||+-+ |....+-+ +-...++|.|.|+.+++.-. ...|.+|+-+. ++....+......|..+
T Consensus 232 ~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l 310 (928)
T PF04762_consen 232 ETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIEL 310 (928)
T ss_pred CCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEE
Confidence 22 579999976 55444332 23456899999998888765 23566665332 22222222345679999
Q ss_pred EEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeec-CCCceEEEEEeCCCC-EEEEEECCCeEEEEEC----CCC----
Q 002591 797 CWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSC-NGNKFHSCVFHPTYP-SLLVIGCYQSLELWNM----SEN---- 866 (903)
Q Consensus 797 ~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~-~~~~i~si~~sp~g~-~l~t~s~dg~I~vwdl----~~~---- 866 (903)
.|++|+.+||....+.|.+|...+..- ....++.. ....+..+.|+|... .|.+.+.++.+..+++ ..+
T Consensus 311 ~Wn~ds~iLAv~~~~~vqLWt~~NYHW-YLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~ 389 (928)
T PF04762_consen 311 AWNSDSEILAVWLEDRVQLWTRSNYHW-YLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSS 389 (928)
T ss_pred EECCCCCEEEEEecCCceEEEeeCCEE-EEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCC
Confidence 999999999998888999999876521 12222222 223345588998654 4666666565544433 211
Q ss_pred -----cEEEE-----------------------ccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 867 -----KTMTL-----------------------TAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 867 -----~~~~~-----------------------~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
....+ ......|.+++|++++..+++-..||.|.+|+
T Consensus 390 ~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~ 454 (928)
T PF04762_consen 390 PNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYE 454 (928)
T ss_pred ccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEE
Confidence 11111 11457899999999998899999999999874
No 272
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.11 E-value=7.9e-09 Score=121.79 Aligned_cols=194 Identities=13% Similarity=0.206 Sum_probs=149.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCC----eEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSL----ITDVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~----V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
.+.|....+..+.+.++.++.+..+.+||...+.....+...... ..-+-++++.-++++|+.-+.|.+|+.....
T Consensus 87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn 166 (967)
T KOG0974|consen 87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN 166 (967)
T ss_pred cccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccC
Confidence 344555666677889999999999999998876666555433221 2223346666789999999999999998544
Q ss_pred ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE-E---eecCceeEEEecCCCEEEEEEcCCeEEE
Q 002591 699 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR-V---FKGGTAQMRFQPHLGRYLAAAAENVVSI 774 (903)
Q Consensus 699 ~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~-~---~~~~~~~v~~sp~~~~ll~~s~dg~I~i 774 (903)
... .+.+|.+.|.++.|+-+|. +++++++|.++|+|++++.+... + +...+-.+++.|. ++++++.|-+.++
T Consensus 167 ~p~-~l~GHeG~iF~i~~s~dg~-~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrv 242 (967)
T KOG0974|consen 167 KPI-RLKGHEGSIFSIVTSLDGR-YIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRV 242 (967)
T ss_pred Ccc-eecccCCceEEEEEccCCc-EEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEE
Confidence 444 6889999999999999877 55699999999999999988665 2 2234566778887 9999999999999
Q ss_pred EECCCCeEEEEecCCC-CCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 002591 775 LDAETQACRLSLQGHT-KPIDSVCWDPSGELLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 775 ~D~~t~~~~~~l~~h~-~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~ 821 (903)
|+.... .+..+..|. ..|..++..++...+++++.| .+++||+...
T Consensus 243 W~~~~~-~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 243 WGVNGT-QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred Eecccc-eehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 965543 333667765 468999999988899999999 9999998754
No 273
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.09 E-value=1.7e-09 Score=111.22 Aligned_cols=237 Identities=17% Similarity=0.315 Sum_probs=161.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc-----eeEEeccCC------------CCeEEEEECCCCC--EEEE
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK-----SKTNLEEHS------------SLITDVRFSPSMP--RLAT 682 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~-----~~~~l~~h~------------~~V~~l~fspdg~--~Las 682 (903)
..+.|+++.|...|.||++|...|.|.+|.-+... ....|.+|. ..|..|.|..++. .++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 45689999999999999999999999999755322 222344442 4588899976644 5667
Q ss_pred EeCCCcEEEEeCCCCCc-----------------------------------------eeEEe-ccCCCceEEEEecCCC
Q 002591 683 SSFDKTVRVWDADNPGY-----------------------------------------SLRTF-MGHSASVMSLDFHPNK 720 (903)
Q Consensus 683 gs~Dg~I~IWDl~~~~~-----------------------------------------~~~~~-~~h~~~V~sl~fsp~~ 720 (903)
.+.|++|++|.+..... +.+.+ ..|...|.+|.|..+.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 77899999998864210 01112 3577788899999887
Q ss_pred CeEEEEEeCCCcEEEEEcCCCe-eeE--Eeec--------CceeEEEecCC-CEEEEEEcCCeEEEEECCCCeE------
Q 002591 721 DDLICSCDGDGEIRYWSINNGS-CTR--VFKG--------GTAQMRFQPHL-GRYLAAAAENVVSILDAETQAC------ 782 (903)
Q Consensus 721 ~~ll~sgs~Dg~I~iwDi~t~~-~~~--~~~~--------~~~~v~~sp~~-~~ll~~s~dg~I~i~D~~t~~~------ 782 (903)
..+| ++ .|-.|.+|+++-.. +.. .++. -+++..|+|.. ..+...++.|.|++.|++....
T Consensus 185 et~l-Sa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~k 262 (460)
T COG5170 185 ETLL-SA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKK 262 (460)
T ss_pred heee-ec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchh
Confidence 6555 44 48889999987432 111 1111 24556788866 5667778899999999984311
Q ss_pred EE----------EecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCC------------Cc---e
Q 002591 783 RL----------SLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNG------------NK---F 837 (903)
Q Consensus 783 ~~----------~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~------------~~---i 837 (903)
+. -+.+-...|..+.|+++|+||++-+.-+|+|||++..+ .++.++.-|. .. -
T Consensus 263 lfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyltvkiwDvnm~k--~pikTi~~h~~l~~~l~d~YEnDaifdk 340 (460)
T COG5170 263 LFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYLTVKIWDVNMAK--NPIKTIPMHCDLMDELNDVYENDAIFDK 340 (460)
T ss_pred hhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccceEEEEeccccc--CCceeechHHHHHHHHHhhhhccceeee
Confidence 11 11222356788999999999998877799999998764 3444443221 11 2
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEE
Q 002591 838 HSCVFHPTYPSLLVIGCYQSLELWN 862 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~dg~I~vwd 862 (903)
..|.|+.+.+.+++|+..+..-||-
T Consensus 341 FeisfSgd~~~v~sgsy~NNfgiyp 365 (460)
T COG5170 341 FEISFSGDDKHVLSGSYSNNFGIYP 365 (460)
T ss_pred EEEEecCCcccccccccccceeeec
Confidence 3567888888899988877666665
No 274
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.07 E-value=4.3e-09 Score=117.46 Aligned_cols=201 Identities=14% Similarity=0.189 Sum_probs=145.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCceeEEecc---CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEeecC
Q 002591 675 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMG---HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVFKGG 750 (903)
Q Consensus 675 pdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~---h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~~~~ 750 (903)
+...++|....||.+||||..+ +.....|.. -++..++..| .+.-+. +.+... -
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~-~~~~~e~~p~~~~s~t~~~~~w--------------------~L~~~~s~~k~~~-~ 60 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAK-NQLQQEFAPIASLSGTCTYTKW--------------------GLSADYSPMKWLS-L 60 (541)
T ss_pred chhheEeecCCCCeEEEEEccC-ceeeeeeccchhccCcceeEEE--------------------EEEeccchHHHHh-H
Confidence 4456889999999999999987 333333321 1223333333 211110 000000 0
Q ss_pred ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEec--CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceE
Q 002591 751 TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQ--GHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECV 827 (903)
Q Consensus 751 ~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~--~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i 827 (903)
......+.+...++.|...|.|.+|++..++....+. .|.+.|+++.++.+-..|.+++.| .+..|+.... ..+
T Consensus 61 ~~~~~~s~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~---~~~ 137 (541)
T KOG4547|consen 61 EKAKKASLDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEK---VII 137 (541)
T ss_pred HHHhhccCCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccc---eee
Confidence 0001112233457777888999999999999888876 599999999999988899999999 9999999765 677
Q ss_pred EEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecC-----CCEEEEE-ecCCcEE
Q 002591 828 HELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTE-----TGYVASA-SHDKFVK 900 (903)
Q Consensus 828 ~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spd-----g~~LaSg-s~DG~I~ 900 (903)
..+.+....+.+++++||+..+++++ +.|++||+++++++ ++.+|.++|+++.|..+ |.+|.++ ..+..|.
T Consensus 138 ~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~ 215 (541)
T KOG4547|consen 138 RIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGIT 215 (541)
T ss_pred eeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecccccccee
Confidence 77777788899999999999888876 57999999999988 89999999999999877 6666554 4455566
Q ss_pred Ec
Q 002591 901 LW 902 (903)
Q Consensus 901 IW 902 (903)
+|
T Consensus 216 ~w 217 (541)
T KOG4547|consen 216 VW 217 (541)
T ss_pred EE
Confidence 66
No 275
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.06 E-value=9.4e-10 Score=134.35 Aligned_cols=208 Identities=17% Similarity=0.284 Sum_probs=165.4
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----Cce
Q 002591 677 MPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----GTA 752 (903)
Q Consensus 677 g~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----~~~ 752 (903)
+..+..+..++...-|..+..+ ..++.+-..|.++.-||...+++ ||+.||.|++|....+..+..++. .+.
T Consensus 2180 s~~~~~~n~~~~~~tq~~~~~~---~~~k~~v~~v~r~~sHp~~~~Yl-tgs~dgsv~~~~w~~~~~v~~~rt~g~s~vt 2255 (2439)
T KOG1064|consen 2180 SNRFTPSNLPWLGSTQTSRGAS---VMIKHPVENVRRMTSHPSDPYYL-TGSQDGSVRMFEWGHGQQVVCFRTAGNSRVT 2255 (2439)
T ss_pred cccCCcccCCccccceecccce---eEeecccCceeeecCCCCCceEE-ecCCCceEEEEeccCCCeEEEeeccCcchhh
Confidence 3444555556666666655322 33344566788898899888666 999999999999998887777653 456
Q ss_pred eEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC---C-eEEEEECCCCCCcceEE
Q 002591 753 QMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE---D-SVRVWTVGSGSEGECVH 828 (903)
Q Consensus 753 ~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~---d-~I~iwdl~s~~~~~~i~ 828 (903)
.+.|+..|+.+-++..||.+.+|.+. .++......|....+.+.|-- ..+++.+. + .+.+||..-.....+++
T Consensus 2256 r~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~ 2332 (2439)
T KOG1064|consen 2256 RSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH 2332 (2439)
T ss_pred hhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee
Confidence 68899999999999999999999987 677777888999999999884 66666543 3 89999987666556666
Q ss_pred EeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 829 ELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 829 ~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.+|...++++++.|....|++|+.+|.|++||++-.+++ .+.. ++ ...+|++|+..|.|+||+
T Consensus 2333 --~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~ 2396 (2439)
T KOG1064|consen 2333 --TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWR 2396 (2439)
T ss_pred --eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEE
Confidence 789999999999999999999999999999999887766 3332 44 567899999999999996
No 276
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.06 E-value=1.3e-07 Score=119.56 Aligned_cols=239 Identities=13% Similarity=0.144 Sum_probs=159.7
Q ss_pred EEEEEcCC-CCEEEEEeCCCcEEEEECCCCceeEEecc-C-------------CCCeEEEEECCCCCEEEEEeC-CCcEE
Q 002591 627 ICCHFSSD-GKLLATGGHDKKAVLWHTDTLKSKTNLEE-H-------------SSLITDVRFSPSMPRLATSSF-DKTVR 690 (903)
Q Consensus 627 ~~l~fspd-g~~Latgs~Dg~V~vWd~~t~~~~~~l~~-h-------------~~~V~~l~fspdg~~Lasgs~-Dg~I~ 690 (903)
..++++++ +.++++-..++.|++||.. +..+..+.. . -..-..|++.+++..|+++.. .+.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 45788875 5566666778899999976 444444332 1 123578999998887766654 57799
Q ss_pred EEeCCCCCceeEEeccC-----------------CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee-----
Q 002591 691 VWDADNPGYSLRTFMGH-----------------SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK----- 748 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h-----------------~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~----- 748 (903)
++|+.+ + .+.++.+- -..-+.++|+|+++.++++...++.|++||..++.......
T Consensus 650 ~id~~~-~-~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~ 727 (1057)
T PLN02919 650 EIDFVN-E-TVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYER 727 (1057)
T ss_pred EEecCC-C-EEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccc
Confidence 999876 2 34444221 11235799999777788788889999999998775432110
Q ss_pred ------------cCceeEEEecCCCEEEEEEc-CCeEEEEECCCCeEEEEecC-------------C--------CCCeE
Q 002591 749 ------------GGTAQMRFQPHLGRYLAAAA-ENVVSILDAETQACRLSLQG-------------H--------TKPID 794 (903)
Q Consensus 749 ------------~~~~~v~~sp~~~~ll~~s~-dg~I~i~D~~t~~~~~~l~~-------------h--------~~~V~ 794 (903)
.....++++++++.++++.. ++.|++||+.++.......+ + -..-.
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~ 807 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL 807 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence 12335889999986665554 68999999987653221100 0 01235
Q ss_pred EEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEE----------eecCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 002591 795 SVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHE----------LSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 795 sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~----------~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl 863 (903)
.++|+++|.++++...+ .|++||..++........ ....-.....++++++|+.+++-+.++.|++||+
T Consensus 808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~ 887 (1057)
T PLN02919 808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDL 887 (1057)
T ss_pred eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 78999999987777777 999999976522111100 0111235678899999998777788899999999
Q ss_pred CCCcE
Q 002591 864 SENKT 868 (903)
Q Consensus 864 ~~~~~ 868 (903)
.+++.
T Consensus 888 ~~~~~ 892 (1057)
T PLN02919 888 NKGEA 892 (1057)
T ss_pred CCCcc
Confidence 98765
No 277
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.06 E-value=1.1e-07 Score=120.19 Aligned_cols=232 Identities=11% Similarity=0.099 Sum_probs=154.5
Q ss_pred EEEEECCC-CCEEEEEeCCCcEEEEeCCCCCceeEEecc--C------------CCceEEEEecCCCCeEEEEEeCCCcE
Q 002591 669 TDVRFSPS-MPRLATSSFDKTVRVWDADNPGYSLRTFMG--H------------SASVMSLDFHPNKDDLICSCDGDGEI 733 (903)
Q Consensus 669 ~~l~fspd-g~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~--h------------~~~V~sl~fsp~~~~ll~sgs~Dg~I 733 (903)
..++++++ +.++++-+.++.|++||... ..+..+.+ . -.....|++.++++.++++-...+.|
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G--~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~I 648 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDG--NFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHAL 648 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCC--CEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceE
Confidence 46788765 55666667788999999864 33333322 1 12357799998877666555566889
Q ss_pred EEEEcCCCeeeEEee-------------------cCceeEEEecCCCEEEE-EEcCCeEEEEECCCCeEEEEecCC----
Q 002591 734 RYWSINNGSCTRVFK-------------------GGTAQMRFQPHLGRYLA-AAAENVVSILDAETQACRLSLQGH---- 789 (903)
Q Consensus 734 ~iwDi~t~~~~~~~~-------------------~~~~~v~~sp~~~~ll~-~s~dg~I~i~D~~t~~~~~~l~~h---- 789 (903)
+++|+.++....... .....++++++++.+++ ...++.|++||..++.... +.+.
T Consensus 649 r~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~-~~G~G~~~ 727 (1057)
T PLN02919 649 REIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRV-FSGDGYER 727 (1057)
T ss_pred EEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEE-EecCCccc
Confidence 999988765332211 11245889996655544 4567899999998875432 2111
Q ss_pred -----------CCCeEEEEEcCCCCEEEEE-eCC-eEEEEECCCCCCcceE----------EEeec--------CCCceE
Q 002591 790 -----------TKPIDSVCWDPSGELLASV-SED-SVRVWTVGSGSEGECV----------HELSC--------NGNKFH 838 (903)
Q Consensus 790 -----------~~~V~sl~~spdg~~lasg-s~d-~I~iwdl~s~~~~~~i----------~~~~~--------~~~~i~ 838 (903)
-.....|+|+|++..|+++ +.+ .|++||+.++...... ..+.. ......
T Consensus 728 ~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~ 807 (1057)
T PLN02919 728 NLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPL 807 (1057)
T ss_pred cCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCc
Confidence 1234569999999855444 444 9999999865321000 00000 011245
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccC--------------CCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 839 SCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAH--------------EGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 839 si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h--------------~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.++++++|..+++-..++.|++||..++.+..+.+. -.....++++++|+++++-+.+++|++||
T Consensus 808 Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid 886 (1057)
T PLN02919 808 GVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLD 886 (1057)
T ss_pred eeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEE
Confidence 789999999877778889999999998877654432 23578899999999999888999999996
No 278
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.00 E-value=5.4e-08 Score=110.93 Aligned_cols=213 Identities=15% Similarity=0.168 Sum_probs=156.9
Q ss_pred ccccCcceeeeeEeecCCCCeEEEEEcCCC------------CEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEE
Q 002591 606 DVSQGFSFKEANSVRASTSKVICCHFSSDG------------KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF 673 (903)
Q Consensus 606 d~~~~~~~~~~~~l~~H~~~V~~l~fspdg------------~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~f 673 (903)
.+.+..+++.+.+++-|...|+.|.|.|-. -+||++...|.|.|||+..+..+..+..|.++|.+++|
T Consensus 38 ~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W 117 (1062)
T KOG1912|consen 38 SVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCW 117 (1062)
T ss_pred EEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheee
Confidence 344455888999999999999999998621 26788888899999999999999999999999999999
Q ss_pred CC---CC-CEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC-------Ce
Q 002591 674 SP---SM-PRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN-------GS 742 (903)
Q Consensus 674 sp---dg-~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t-------~~ 742 (903)
-+ +. ..|++-....+|.+|+.++ +..+..+........|+.+.|-..+-++.-+..|.|.+-+.-. ++
T Consensus 118 ~~~rd~Srd~LlaIh~ss~lvLwntdt-G~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk 196 (1062)
T KOG1912|consen 118 VPARDDSRDVLLAIHGSSTLVLWNTDT-GEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGK 196 (1062)
T ss_pred eeccCcchheeEEecCCcEEEEEEccC-CceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCce
Confidence 65 33 3566666788999999998 5556666655566778999987666666666678777776532 11
Q ss_pred eeEEeec----------------------------CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeE
Q 002591 743 CTRVFKG----------------------------GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 743 ~~~~~~~----------------------------~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
....-.. -...++|+|.-+.++.......+.|+|++-..++..+.-..+.+.
T Consensus 197 ~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~ak 276 (1062)
T KOG1912|consen 197 EFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAK 276 (1062)
T ss_pred eEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcc
Confidence 1111000 011255788888888888899999999998888887776677777
Q ss_pred EEEEcCCCC--EEEEEeCC-eEEEEECC
Q 002591 795 SVCWDPSGE--LLASVSED-SVRVWTVG 819 (903)
Q Consensus 795 sl~~spdg~--~lasgs~d-~I~iwdl~ 819 (903)
-+.|-|+++ .|++...+ .+.||-.+
T Consensus 277 fv~vlP~~~rd~LfclH~nG~ltirvrk 304 (1062)
T KOG1912|consen 277 FVDVLPDPRRDALFCLHSNGRLTIRVRK 304 (1062)
T ss_pred eeEeccCCCcceEEEEecCCeEEEEEee
Confidence 777877665 66666666 77777544
No 279
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.97 E-value=1.6e-07 Score=107.68 Aligned_cols=190 Identities=11% Similarity=0.093 Sum_probs=130.3
Q ss_pred CeEEEEEcCCCCE-EEEEeCC---CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEE-eCC--CcEEEEeCCCC
Q 002591 625 KVICCHFSSDGKL-LATGGHD---KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS-SFD--KTVRVWDADNP 697 (903)
Q Consensus 625 ~V~~l~fspdg~~-Latgs~D---g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasg-s~D--g~I~IWDl~~~ 697 (903)
.+...+|+|||+. ++..+.+ ..|+++|+.+++..... ...+.+....|+|||+.|+.. +.+ ..|.++|+.+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt-~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~- 266 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA-SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNT- 266 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe-cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCC-
Confidence 7889999999984 6654443 46899999887655444 355667788999999877654 333 4677788875
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEeCCC--cEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcC------
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG--EIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAE------ 769 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg--~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~d------ 769 (903)
+. .+.+..+........|+|||+.++++....+ .|+++|+.+++..+....+.....|+|+++.++.....
T Consensus 267 g~-~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~~~~~SPDG~~Ia~~~~~~~~~~~ 345 (419)
T PRK04043 267 KT-LTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKNNSSVSTYKNYIVYSSRETNNEFG 345 (419)
T ss_pred Cc-EEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCCcCceECCCCCEEEEEEcCCCcccC
Confidence 33 4445544443455789999998887776555 57888888887755443332346899999998887754
Q ss_pred ---CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECC
Q 002591 770 ---NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVG 819 (903)
Q Consensus 770 ---g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~ 819 (903)
..|.++|+.++.... +... .......|+|||+.|+..... .+.++++.
T Consensus 346 ~~~~~I~v~d~~~g~~~~-LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~ 400 (419)
T PRK04043 346 KNTFNLYLISTNSDYIRR-LTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLN 400 (419)
T ss_pred CCCcEEEEEECCCCCeEE-CCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecC
Confidence 368888998886543 3322 233468899999976655432 36666664
No 280
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=98.96 E-value=3.2e-09 Score=129.91 Aligned_cols=189 Identities=14% Similarity=0.288 Sum_probs=157.7
Q ss_pred EeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEecc-CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 618 SVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 618 ~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~-h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
.++.|-..|.++.-+|...+.+||+.||.|++|....+..+..++. ....|+.+.|+..|..+..+..||.+.+|.+.
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~- 2281 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS- 2281 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-
Confidence 3455677899999999999999999999999999998888888763 34889999999999999999999999999997
Q ss_pred CCceeEEeccCCCceEEEEecCCCCeEEEEEe---CCCcEEEEEcCCC---eeeE-EeecCceeEEEecCCCEEEEEEcC
Q 002591 697 PGYSLRTFMGHSASVMSLDFHPNKDDLICSCD---GDGEIRYWSINNG---SCTR-VFKGGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 697 ~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs---~Dg~I~iwDi~t~---~~~~-~~~~~~~~v~~sp~~~~ll~~s~d 769 (903)
.++......|.....++.|.. .++++++ .++.+.+||..-. .++. .+.++.+++.+.|....+++|+.+
T Consensus 2282 -pk~~~s~qchnk~~~Df~Fi~---s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~ 2357 (2439)
T KOG1064|consen 2282 -PKPYTSWQCHNKALSDFRFIG---SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRK 2357 (2439)
T ss_pred -CcceeccccCCccccceeeee---hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCc
Confidence 467888889999999999985 3565654 4789999997532 2333 345678999999999999999999
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~ 821 (903)
|.|++||++..+.++.+.. ++ ...+|++++.. .|+||++...
T Consensus 2358 G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2358 GEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred CcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEcccc
Confidence 9999999999888877763 55 56788888877 9999999765
No 281
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.95 E-value=2.3e-09 Score=121.03 Aligned_cols=218 Identities=20% Similarity=0.290 Sum_probs=157.2
Q ss_pred cccccccCcceeeeeEeecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCC-ceeEEeccCCCCeEEEEECCCCCEE
Q 002591 603 RGMDVSQGFSFKEANSVRASTSKVICCHFSSDG-KLLATGGHDKKAVLWHTDTL-KSKTNLEEHSSLITDVRFSPSMPRL 680 (903)
Q Consensus 603 ~~~d~~~~~~~~~~~~l~~H~~~V~~l~fspdg-~~Latgs~Dg~V~vWd~~t~-~~~~~l~~h~~~V~~l~fspdg~~L 680 (903)
.+|.+.+...-.....+.+|+..|+.+-|.+.. ..||+++.|-.|..||+.+. ..+..+..-...-.-|+|+-....+
T Consensus 94 iiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~v 173 (1081)
T KOG0309|consen 94 IIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNV 173 (1081)
T ss_pred hhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcch
Confidence 345555555555667788999999999999865 48999999999999999854 4455555555667889998877777
Q ss_pred EEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE--Ee--ecCceeEEE
Q 002591 681 ATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR--VF--KGGTAQMRF 756 (903)
Q Consensus 681 asgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~--~~--~~~~~~v~~ 756 (903)
.+.+....|+|||++.++.++..+++|...|..++|.......+.+++.||+|++||........ .. +..+-.-++
T Consensus 174 lasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~ 253 (1081)
T KOG0309|consen 174 LASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRY 253 (1081)
T ss_pred hhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccc
Confidence 77777888999999998899999999999999999987655567799999999999987543221 11 122333344
Q ss_pred ecCCCEEEEE-----------EcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcC--------CCC--EEEEEeCC-eE
Q 002591 757 QPHLGRYLAA-----------AAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDP--------SGE--LLASVSED-SV 813 (903)
Q Consensus 757 sp~~~~ll~~-----------s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~sp--------dg~--~lasgs~d-~I 813 (903)
.|-+.-++.- -.++....|+..++ ..++.|.||.+.|...-|-. +.+ -|++=+.| ++
T Consensus 254 ~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~l 333 (1081)
T KOG0309|consen 254 LPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTL 333 (1081)
T ss_pred cccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCce
Confidence 4444222221 11223333444443 68899999999887666543 222 68899999 99
Q ss_pred EEEECCC
Q 002591 814 RVWTVGS 820 (903)
Q Consensus 814 ~iwdl~s 820 (903)
++|-+.+
T Consensus 334 rlWpI~~ 340 (1081)
T KOG0309|consen 334 RLWPIDS 340 (1081)
T ss_pred EeeeccH
Confidence 9998864
No 282
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.95 E-value=5.4e-07 Score=103.29 Aligned_cols=224 Identities=12% Similarity=0.105 Sum_probs=144.9
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCE-EEEEeCC---CcEEEEeCCCCCceeEEeccCCCceEEEEecCCC
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPR-LATSSFD---KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNK 720 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~-Lasgs~D---g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~ 720 (903)
..|.+-|.+... .+.+.... .+...+|+|||+. ++..+.+ ..|.++|+.+ +.. +.+....+.+....|+||+
T Consensus 169 ~~l~~~d~dg~~-~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~t-g~~-~~lt~~~g~~~~~~~SPDG 244 (419)
T PRK04043 169 SNIVLADYTLTY-QKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYT-GKK-EKIASSQGMLVVSDVSKDG 244 (419)
T ss_pred ceEEEECCCCCc-eeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCC-CcE-EEEecCCCcEEeeEECCCC
Confidence 345555554333 33343333 7889999999984 6654443 4588899976 433 3333355566778899999
Q ss_pred CeEEEEEeCC--CcEEEEEcCCCeeeEEeecC--ceeEEEecCCCEEEEEEcC-C--eEEEEECCCCeEEEEecCCCCCe
Q 002591 721 DDLICSCDGD--GEIRYWSINNGSCTRVFKGG--TAQMRFQPHLGRYLAAAAE-N--VVSILDAETQACRLSLQGHTKPI 793 (903)
Q Consensus 721 ~~ll~sgs~D--g~I~iwDi~t~~~~~~~~~~--~~~v~~sp~~~~ll~~s~d-g--~I~i~D~~t~~~~~~l~~h~~~V 793 (903)
..++++.+.+ ..|.++|+.+++........ .....|+|++..++..+.. + .|+++|+.+++....... ...
T Consensus 245 ~~la~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~-g~~- 322 (419)
T PRK04043 245 SKLLLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFH-GKN- 322 (419)
T ss_pred CEEEEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccC-CCc-
Confidence 9888777655 46888888887755433322 3456799999988887753 2 788889988876443322 111
Q ss_pred EEEEEcCCCCEEEEEeC--------C--eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC---eEEE
Q 002591 794 DSVCWDPSGELLASVSE--------D--SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---SLEL 860 (903)
Q Consensus 794 ~sl~~spdg~~lasgs~--------d--~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---~I~v 860 (903)
...|+|||++|+..+. + .|.+.|+.++.. ..+... .......|+|||+.|+....++ .|.+
T Consensus 323 -~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~----~~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~ 396 (419)
T PRK04043 323 -NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI----RRLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGI 396 (419)
T ss_pred -CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe----EECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEE
Confidence 2489999997766543 2 577788876632 222222 2233578999999988877553 5778
Q ss_pred EECCCCcEEEEccCCCCEEE
Q 002591 861 WNMSENKTMTLTAHEGLIAA 880 (903)
Q Consensus 861 wdl~~~~~~~~~~h~~~V~s 880 (903)
+++.......+....+.|..
T Consensus 397 ~~l~g~~~~~l~~~~g~~~~ 416 (419)
T PRK04043 397 IRLNYNKSFLFPLKVGKIQS 416 (419)
T ss_pred EecCCCeeEEeecCCCccCC
Confidence 88877766666554444443
No 283
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.94 E-value=1e-06 Score=95.78 Aligned_cols=137 Identities=14% Similarity=0.173 Sum_probs=97.0
Q ss_pred CEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEeecCCCceE
Q 002591 761 GRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGECVHELSCNGNKFH 838 (903)
Q Consensus 761 ~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~~~~~~~i~ 838 (903)
+.+++..+-|...|++.-.+-.+. .+|...|.-..+.-+++-++.|..| .+-|||.+++ .++.+...-+.|.
T Consensus 332 Gd~ia~VSRGkaFi~~~~~~~~iq--v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~----e~kr~e~~lg~I~ 405 (668)
T COG4946 332 GDYIALVSRGKAFIMRPWDGYSIQ--VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGG----EVKRIEKDLGNIE 405 (668)
T ss_pred CcEEEEEecCcEEEECCCCCeeEE--cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCc----eEEEeeCCccceE
Confidence 333333344444444443333222 2355567666676666666666655 8899998775 3445555577899
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEc-cCCCCEEEEEEecCCCEEEEEecCCc----EEEcC
Q 002591 839 SCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLT-AHEGLIAALAVSTETGYVASASHDKF----VKLWK 903 (903)
Q Consensus 839 si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~-~h~~~V~sl~~spdg~~LaSgs~DG~----I~IWd 903 (903)
++..+++|++++++.....|.++|+.++....+. ...+.|+.++|+|++++||-+--+|. |+|||
T Consensus 406 av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklyd 475 (668)
T COG4946 406 AVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYD 475 (668)
T ss_pred EEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEe
Confidence 9999999999999988899999999999987544 56788999999999999998876664 55553
No 284
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.92 E-value=1e-09 Score=125.69 Aligned_cols=262 Identities=16% Similarity=0.188 Sum_probs=180.9
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCC--cE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDK--TV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg--~I 689 (903)
.|+..++|+.|+...+|++|+-+.++|++|+..|.|++|++.+|.......+|..+|+.|.=+.+|..+++.+.-. -.
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchH
Confidence 5788889999999999999999999999999999999999999999999999999999999999999877765533 47
Q ss_pred EEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec-------CceeEEEecCCCE
Q 002591 690 RVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG-------GTAQMRFQPHLGR 762 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-------~~~~v~~sp~~~~ 762 (903)
.+|++.+.....++|.+ -.++.|+.....-+ .|.....+.+||+.++..+.++-. ..+...|+|.+..
T Consensus 1170 aLW~~~s~~~~~Hsf~e----d~~vkFsn~~q~r~-~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~L 1244 (1516)
T KOG1832|consen 1170 ALWDASSTGGPRHSFDE----DKAVKFSNSLQFRA-LGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTL 1244 (1516)
T ss_pred HHhccccccCccccccc----cceeehhhhHHHHH-hcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcce
Confidence 89999875555566653 44577875533222 344446788999999876655322 2355778888776
Q ss_pred EEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEE
Q 002591 763 YLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVF 842 (903)
Q Consensus 763 ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~ 842 (903)
++- || .+||++..+.++.|......+ .-.|+|.|.-++.-+ .|||+++......+..+ .-..+.|
T Consensus 1245 Iln---dG--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~g~eVIINS----EIwD~RTF~lLh~VP~L-----dqc~VtF 1309 (1516)
T KOG1832|consen 1245 ILN---DG--VLWDVRIPEAIHRFDQFTDYG-GGGFHPSGNEVIINS----EIWDMRTFKLLHSVPSL-----DQCAVTF 1309 (1516)
T ss_pred Eee---Cc--eeeeeccHHHHhhhhhheecc-cccccCCCceEEeec----hhhhhHHHHHHhcCccc-----cceEEEe
Confidence 653 33 579999988887776544222 346999999777765 58999987332222221 2245567
Q ss_pred eCCCCEEEEEEC--C---------------CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEE
Q 002591 843 HPTYPSLLVIGC--Y---------------QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 843 sp~g~~l~t~s~--d---------------g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSg 893 (903)
+..|..++..-. | ...+-||...-..+........|..+|-.+...+++..
T Consensus 1310 NstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~Dlct~~~D~~l~vI 1377 (1516)
T KOG1832|consen 1310 NSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPVDRCLLDLCTEPTDSFLGVI 1377 (1516)
T ss_pred ccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeecccchhhhhcCCccceEEEE
Confidence 777765544320 0 02333443333334333445566666766666666553
No 285
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.88 E-value=2.9e-07 Score=93.56 Aligned_cols=221 Identities=8% Similarity=-0.010 Sum_probs=149.3
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee---cCce
Q 002591 676 SMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK---GGTA 752 (903)
Q Consensus 676 dg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~---~~~~ 752 (903)
...+||.|+..|...+|...+....+.....|...|+-+.=..+...-+..++.|.++++.+++-+....... ....
T Consensus 83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~n 162 (344)
T KOG4532|consen 83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQN 162 (344)
T ss_pred cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecccccee
Confidence 3458999999999999999875544555554544443222212222233468889999998887654333222 2367
Q ss_pred eEEEecCCCEEEEEEcCCeEEEEECCCC-eE-EE-EecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcc--e
Q 002591 753 QMRFQPHLGRYLAAAAENVVSILDAETQ-AC-RL-SLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGE--C 826 (903)
Q Consensus 753 ~v~~sp~~~~ll~~s~dg~I~i~D~~t~-~~-~~-~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~--~ 826 (903)
.+.+++++.+.++.+....|..|.+... +. +. .....++.-.+..|+.....+|++..| ++.|||++...... .
T Consensus 163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~ 242 (344)
T KOG4532|consen 163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI 242 (344)
T ss_pred eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhh
Confidence 8899999999999999999999987654 22 22 223344556788999999999999999 99999998763321 1
Q ss_pred EEEeecCCCceEEEEEeCCCC--EEEEEECCCeEEEEECCCCcEEE--------EccCCC-CEEEEEEecCCCEEEEEec
Q 002591 827 VHELSCNGNKFHSCVFHPTYP--SLLVIGCYQSLELWNMSENKTMT--------LTAHEG-LIAALAVSTETGYVASASH 895 (903)
Q Consensus 827 i~~~~~~~~~i~si~~sp~g~--~l~t~s~dg~I~vwdl~~~~~~~--------~~~h~~-~V~sl~~spdg~~LaSgs~ 895 (903)
...-..|.+.+..|.|++.|. .|+..-.-+.+.|.|+++++-.. ...|.. .|..-.|+.++.-+.+.++
T Consensus 243 sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e 322 (344)
T KOG4532|consen 243 SSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNE 322 (344)
T ss_pred cccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCcccccccc
Confidence 223345788999999998664 34554455789999999887541 122333 3777888877766555544
Q ss_pred C
Q 002591 896 D 896 (903)
Q Consensus 896 D 896 (903)
+
T Consensus 323 ~ 323 (344)
T KOG4532|consen 323 L 323 (344)
T ss_pred h
Confidence 3
No 286
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.86 E-value=1.1e-07 Score=108.37 Aligned_cols=237 Identities=16% Similarity=0.210 Sum_probs=166.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCC------------CCEEEEEeCCCcEE
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPS------------MPRLATSSFDKTVR 690 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspd------------g~~Lasgs~Dg~I~ 690 (903)
...-.++.|++.| +||.|+. ..|.|.|..+.+.+..++.|...|+.|+|.|. .-+||++...|.|.
T Consensus 15 ~sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi 92 (1062)
T KOG1912|consen 15 RSNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII 92 (1062)
T ss_pred cccccccccCccc-eEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence 3346788999988 7888875 47999999999999999999999999999873 12577778899999
Q ss_pred EEeCCCCCceeEEeccCCCceEEEEecCC---CCeEEEEEeCCCcEEEEEcCCCeeeEEeecC---ceeEEEecCC-CEE
Q 002591 691 VWDADNPGYSLRTFMGHSASVMSLDFHPN---KDDLICSCDGDGEIRYWSINNGSCTRVFKGG---TAQMRFQPHL-GRY 763 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h~~~V~sl~fsp~---~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~---~~~v~~sp~~-~~l 763 (903)
|||... ...+..+..|.++|..++|-+. .++++++-....+|.+|+..+|+....+... ..++.+.|-+ ..+
T Consensus 93 l~d~~~-~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~ 171 (1062)
T KOG1912|consen 93 LVDFVL-ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHF 171 (1062)
T ss_pred EEEehh-hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceE
Confidence 999987 6667778889999999999763 4456767777899999999999887766532 3446677765 456
Q ss_pred EEEEcCCeEEEEECCC-------CeEEEEecCCCC----------------C---------eEEEEEcCCCC-EEEEEeC
Q 002591 764 LAAAAENVVSILDAET-------QACRLSLQGHTK----------------P---------IDSVCWDPSGE-LLASVSE 810 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t-------~~~~~~l~~h~~----------------~---------V~sl~~spdg~-~lasgs~ 810 (903)
.+.+..|.|.+.+.-- ++....-..|.+ . ...++|+|.-+ .++..-.
T Consensus 172 ~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~p 251 (1062)
T KOG1912|consen 172 CVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFP 251 (1062)
T ss_pred EEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEec
Confidence 6666677766665321 222222222222 0 11256777655 3333434
Q ss_pred CeEEEEECCCCCCcceEEEeecCCCceEEEEEeC--CCCEEEEEECCCeEEEEECCC
Q 002591 811 DSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP--TYPSLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 811 d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp--~g~~l~t~s~dg~I~vwdl~~ 865 (903)
..+.|+|++-. .++.......+.+.-+.+-| ....|++...||.+.||-.+.
T Consensus 252 rellv~dle~~---~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 252 RELLVFDLEYE---CCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred cceEEEcchhh---ceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 48999999654 45555544444444445555 456799999999999997654
No 287
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.84 E-value=1.8e-06 Score=107.58 Aligned_cols=274 Identities=12% Similarity=0.201 Sum_probs=174.8
Q ss_pred CCeEEEEEcCCCCEEEE--EeCCC--cEEEEECCCC---ceeEEec-----cCCCCeEEEEECCCCCEEEEEeCCCcEEE
Q 002591 624 SKVICCHFSSDGKLLAT--GGHDK--KAVLWHTDTL---KSKTNLE-----EHSSLITDVRFSPSMPRLATSSFDKTVRV 691 (903)
Q Consensus 624 ~~V~~l~fspdg~~Lat--gs~Dg--~V~vWd~~t~---~~~~~l~-----~h~~~V~~l~fspdg~~Lasgs~Dg~I~I 691 (903)
..+...+|......+.. +..+. .|.+...... +.+..+. ...+.|.++.|.++...|+.+..+|.|.+
T Consensus 22 ~~~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~ 101 (928)
T PF04762_consen 22 LPITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASGDIIL 101 (928)
T ss_pred cccceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCceEEE
Confidence 35667777765543333 32222 2333333222 2333333 34578999999999999999999999999
Q ss_pred E----eCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC---------------CCeee--------
Q 002591 692 W----DADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN---------------NGSCT-------- 744 (903)
Q Consensus 692 W----Dl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~---------------t~~~~-------- 744 (903)
+ +..+ ..+.....-...|.+++|+||.. +++....+++|.+.+.. ..+.+
T Consensus 102 ~~~~~~~~~--~~~E~VG~vd~GI~a~~WSPD~E-lla~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKe 178 (928)
T PF04762_consen 102 VREDPDPDE--DEIEIVGSVDSGILAASWSPDEE-LLALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKE 178 (928)
T ss_pred EEccCCCCC--ceeEEEEEEcCcEEEEEECCCcC-EEEEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCccc
Confidence 9 5543 33444444567899999999977 44556667777665421 00000
Q ss_pred EE---------------------------eecCceeEEEecCCCEEEEEEc---C---CeEEEEECCCCeEEEEecCCCC
Q 002591 745 RV---------------------------FKGGTAQMRFQPHLGRYLAAAA---E---NVVSILDAETQACRLSLQGHTK 791 (903)
Q Consensus 745 ~~---------------------------~~~~~~~v~~sp~~~~ll~~s~---d---g~I~i~D~~t~~~~~~l~~h~~ 791 (903)
.. .......++|-.||.+|++.+. . ..|+||+-+ |....+-+.-.+
T Consensus 179 TQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~g 257 (928)
T PF04762_consen 179 TQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDG 257 (928)
T ss_pred CccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCC
Confidence 00 1113345778899999888775 2 478999876 665555444444
Q ss_pred CeEEEEEcCCCCEEEEEeC---C-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc
Q 002591 792 PIDSVCWDPSGELLASVSE---D-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK 867 (903)
Q Consensus 792 ~V~sl~~spdg~~lasgs~---d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~ 867 (903)
--.+++|.|.|++||+.-. . .|.+|.-+..........+......|..+.|++++..|++...|. |.+|-..+..
T Consensus 258 Le~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYH 336 (928)
T PF04762_consen 258 LEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYH 336 (928)
T ss_pred ccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCE
Confidence 4567899999999998865 2 677777544333333333334567899999999999999877555 9999998876
Q ss_pred EE---EEc-cCCCCEEEEEEecCCC-EEEEEecCCcEEEc
Q 002591 868 TM---TLT-AHEGLIAALAVSTETG-YVASASHDKFVKLW 902 (903)
Q Consensus 868 ~~---~~~-~h~~~V~sl~~spdg~-~LaSgs~DG~I~IW 902 (903)
.. .+. .....+..+.|+|... .|...+.+|.+.++
T Consensus 337 WYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~ 376 (928)
T PF04762_consen 337 WYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIY 376 (928)
T ss_pred EEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEE
Confidence 44 222 2334455699998654 46666665666543
No 288
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.84 E-value=1.6e-06 Score=91.70 Aligned_cols=213 Identities=15% Similarity=0.052 Sum_probs=137.8
Q ss_pred CCcEEEEECCCCceeEEeccC--CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCC
Q 002591 644 DKKAVLWHTDTLKSKTNLEEH--SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 644 Dg~V~vWd~~t~~~~~~l~~h--~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~ 721 (903)
+|.|..||..+++.+.....- .....+. ...++.++++++.++.|+.||..+ ++.+..+.. ...+...... .++
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~t-G~~~W~~~~-~~~~~~~~~~-~~~ 77 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKT-GKVLWRFDL-PGPISGAPVV-DGG 77 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTT-SEEEEEEEC-SSCGGSGEEE-ETT
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCC-CCEEEEeec-cccccceeee-ccc
Confidence 689999999999998887541 1222211 223566788888999999999988 666655553 2221111111 234
Q ss_pred eEEEEEeCCCcEEEEEcCCCeeeEEe-ecC------ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCC--
Q 002591 722 DLICSCDGDGEIRYWSINNGSCTRVF-KGG------TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKP-- 792 (903)
Q Consensus 722 ~ll~sgs~Dg~I~iwDi~t~~~~~~~-~~~------~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~-- 792 (903)
.++ ++..|+.|+.+|.++++.+..+ ... .........++.++++..++.|..+|+++|+.+.........
T Consensus 78 ~v~-v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~ 156 (238)
T PF13360_consen 78 RVY-VGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGS 156 (238)
T ss_dssp EEE-EEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS
T ss_pred ccc-cccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCC
Confidence 344 5667889999999999988774 321 122334444788999999999999999999998888764422
Q ss_pred --------eEEEEEcCCCCEEEEEeCC-e-EEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 002591 793 --------IDSVCWDPSGELLASVSED-S-VRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWN 862 (903)
Q Consensus 793 --------V~sl~~spdg~~lasgs~d-~-I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwd 862 (903)
+..-....++ .++.++.+ . +.+ |+.+++ .+.... ...+.. .....+..|++++.++.|.+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~-d~~tg~---~~w~~~--~~~~~~-~~~~~~~~l~~~~~~~~l~~~d 228 (238)
T PF13360_consen 157 SPISSFSDINGSPVISDG-RVYVSSGDGRVVAV-DLATGE---KLWSKP--ISGIYS-LPSVDGGTLYVTSSDGRLYALD 228 (238)
T ss_dssp --EEEETTEEEEEECCTT-EEEEECCTSSEEEE-ETTTTE---EEEEEC--SS-ECE-CEECCCTEEEEEETTTEEEEEE
T ss_pred cceeeecccccceEEECC-EEEEEcCCCeEEEE-ECCCCC---EEEEec--CCCccC-CceeeCCEEEEEeCCCEEEEEE
Confidence 1222223344 55555544 4 555 998874 222222 222222 2456778888888999999999
Q ss_pred CCCCcEE
Q 002591 863 MSENKTM 869 (903)
Q Consensus 863 l~~~~~~ 869 (903)
+++++.+
T Consensus 229 ~~tG~~~ 235 (238)
T PF13360_consen 229 LKTGKVV 235 (238)
T ss_dssp TTTTEEE
T ss_pred CCCCCEE
Confidence 9999876
No 289
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.82 E-value=1.4e-06 Score=99.90 Aligned_cols=252 Identities=11% Similarity=0.027 Sum_probs=155.0
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCce---
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASV--- 711 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V--- 711 (903)
+..++.++.++.|+.+|.++++.+............... .+..+++++.++.|..+|.++ ++.+..+......+
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~t-G~~~W~~~~~~~~~~~~ 196 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESD-GAVKWTVNLDVPSLTLR 196 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE--ECCEEEEECCCCEEEEEEccC-CCEeeeecCCCCccccc
Confidence 456777888999999999999988877654322211122 234677788899999999988 55555544221100
Q ss_pred --EEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCc----------eeEEEec--CCCEEEEEEcCCeEEEEEC
Q 002591 712 --MSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGT----------AQMRFQP--HLGRYLAAAAENVVSILDA 777 (903)
Q Consensus 712 --~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~----------~~v~~sp--~~~~ll~~s~dg~I~i~D~ 777 (903)
.+-... ++. ++.++.+|.+..+|..+++.+..+.... ..+...| .++.+++++.++.+..+|.
T Consensus 197 ~~~sP~v~--~~~-v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~ 273 (394)
T PRK11138 197 GESAPATA--FGG-AIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDL 273 (394)
T ss_pred CCCCCEEE--CCE-EEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEEC
Confidence 011111 233 4467778999999999988665543110 0011111 3577888888999999999
Q ss_pred CCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeec-CCCceEEEEEeCCCCEEEEEECC
Q 002591 778 ETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSC-NGNKFHSCVFHPTYPSLLVIGCY 855 (903)
Q Consensus 778 ~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~-~~~~i~si~~sp~g~~l~t~s~d 855 (903)
.+++.+...... ....+.. .+..|+.++.+ .+..+|..+++. +-.... ......+..+ .+.+|++++.+
T Consensus 274 ~tG~~~W~~~~~--~~~~~~~--~~~~vy~~~~~g~l~ald~~tG~~---~W~~~~~~~~~~~sp~v--~~g~l~v~~~~ 344 (394)
T PRK11138 274 RSGQIVWKREYG--SVNDFAV--DGGRIYLVDQNDRVYALDTRGGVE---LWSQSDLLHRLLTAPVL--YNGYLVVGDSE 344 (394)
T ss_pred CCCCEEEeecCC--CccCcEE--ECCEEEEEcCCCeEEEEECCCCcE---EEcccccCCCcccCCEE--ECCEEEEEeCC
Confidence 999887765421 1112222 34555555555 999999987742 221111 0111222222 25678899999
Q ss_pred CeEEEEECCCCcEE-EEccCCCCEE-EEEEecCCCEEEEEecCCcEEEcC
Q 002591 856 QSLELWNMSENKTM-TLTAHEGLIA-ALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 856 g~I~vwdl~~~~~~-~~~~h~~~V~-sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|.|+++|..+++.+ ........+. ...+ .+..|+.++.||.|+.++
T Consensus 345 G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~ 392 (394)
T PRK11138 345 GYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAIT 392 (394)
T ss_pred CEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEe
Confidence 99999999999987 3332323233 2233 245788889999998764
No 290
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.79 E-value=8.2e-06 Score=87.01 Aligned_cols=216 Identities=9% Similarity=0.056 Sum_probs=138.2
Q ss_pred EEEEECC-CCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe
Q 002591 669 TDVRFSP-SMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 747 (903)
Q Consensus 669 ~~l~fsp-dg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~ 747 (903)
.+++|.+ ++.++++-...+.|+.|+..+ +. ...+.... ...+++...++.++ .+.. +.+.++|+.+++....+
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~-~~-~~~~~~~~--~~G~~~~~~~g~l~-v~~~-~~~~~~d~~~g~~~~~~ 76 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDT-GE-VEVIDLPG--PNGMAFDRPDGRLY-VADS-GGIAVVDPDTGKVTVLA 76 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTT-TE-EEEEESSS--EEEEEEECTTSEEE-EEET-TCEEEEETTTTEEEEEE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCC-Ce-EEEEecCC--CceEEEEccCCEEE-EEEc-CceEEEecCCCcEEEEe
Confidence 3678887 565666666789999999987 32 33333222 66777773335455 4554 45566699998755443
Q ss_pred ec--------CceeEEEecCCCEEEEEEcC--------CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEe-C
Q 002591 748 KG--------GTAQMRFQPHLGRYLAAAAE--------NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVS-E 810 (903)
Q Consensus 748 ~~--------~~~~v~~sp~~~~ll~~s~d--------g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs-~ 810 (903)
.. ..+.+++.++++.+++.... +.|+.++.. ++...... .-...+.|+|+|+++.|+.+. .
T Consensus 77 ~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~ 154 (246)
T PF08450_consen 77 DLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSF 154 (246)
T ss_dssp EEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETT
T ss_pred eccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeecccc
Confidence 32 24568899998866665543 568888888 55444333 345578999999999776554 4
Q ss_pred C-eEEEEECCCCCC-cc---eEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEe
Q 002591 811 D-SVRVWTVGSGSE-GE---CVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVS 884 (903)
Q Consensus 811 d-~I~iwdl~s~~~-~~---~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~s 884 (903)
. .|..|++..... .. .+..+.......-.+++..+|+.+++....+.|.++|.. ++.+ .+......+++++|.
T Consensus 155 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fg 233 (246)
T PF08450_consen 155 NGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFG 233 (246)
T ss_dssp TTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEE
T ss_pred cceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEE
Confidence 4 888998864322 11 222223323347889999999988877788999999998 6665 444444689999994
Q ss_pred -cCCCEEEEE
Q 002591 885 -TETGYVASA 893 (903)
Q Consensus 885 -pdg~~LaSg 893 (903)
++.+.|+..
T Consensus 234 g~~~~~L~vT 243 (246)
T PF08450_consen 234 GPDGKTLYVT 243 (246)
T ss_dssp STTSSEEEEE
T ss_pred CCCCCEEEEE
Confidence 565554443
No 291
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.78 E-value=7.8e-09 Score=113.10 Aligned_cols=174 Identities=17% Similarity=0.235 Sum_probs=121.9
Q ss_pred eEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC------ceeEEeccCCCceEEEEecCCCCeEEEEEeCCC
Q 002591 658 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG------YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG 731 (903)
Q Consensus 658 ~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~------~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg 731 (903)
+..+.+|...|..+.--.+.+-+++++.|++|++|.++..+ .|..++..|+.+|.++.|..+.+ .+++| ||
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr-~i~Sc--D~ 804 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLR-SIASC--DG 804 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccc-eeeec--cC
Confidence 45677999999999888888899999999999999997543 35678889999999999998754 34344 89
Q ss_pred cEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEE-eC
Q 002591 732 EIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASV-SE 810 (903)
Q Consensus 732 ~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasg-s~ 810 (903)
.|.+||.--++.+.... +.|. .+..+.|.|+. +-+..+++.+ +.
T Consensus 805 giHlWDPFigr~Laq~~-------dapk---------------------------~~a~~~ikcl~-nv~~~iliAgcsa 849 (1034)
T KOG4190|consen 805 GIHLWDPFIGRLLAQME-------DAPK---------------------------EGAGGNIKCLE-NVDRHILIAGCSA 849 (1034)
T ss_pred cceeecccccchhHhhh-------cCcc---------------------------cCCCceeEecc-cCcchheeeeccc
Confidence 99999976655433211 1111 01112222221 1123344444 44
Q ss_pred C-eEEEEECCCCCCcceEEEe--ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 811 D-SVRVWTVGSGSEGECVHEL--SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 811 d-~I~iwdl~s~~~~~~i~~~--~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
. +|+++|.+..+-...++.. .+....+.+++..+.|++++++-.+|.|.+.|.++|+++
T Consensus 850 eSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vI 911 (1034)
T KOG4190|consen 850 ESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVI 911 (1034)
T ss_pred hhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCcee
Confidence 5 8999999887433333322 223456889999999999999999999999999999977
No 292
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.77 E-value=1.9e-05 Score=84.15 Aligned_cols=214 Identities=18% Similarity=0.203 Sum_probs=138.3
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEEC-CCCCEEEEEeCCCcEEEEeCCCCCceeEEec
Q 002591 628 CCHFSS-DGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS-PSMPRLATSSFDKTVRVWDADNPGYSLRTFM 705 (903)
Q Consensus 628 ~l~fsp-dg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fs-pdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~ 705 (903)
+++|.+ ++.++++....+.|+.|+..++.... +.... ...+++. +++ .|+.+..++ +.++|+.+ +.....+.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~g-~l~v~~~~~-~~~~d~~~-g~~~~~~~ 77 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPDG-RLYVADSGG-IAVVDPDT-GKVTVLAD 77 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTTS-EEEEEETTC-EEEEETTT-TEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccCC-EEEEEEcCc-eEEEecCC-CcEEEEee
Confidence 678888 67777777778999999988765543 32222 6667776 564 555555544 66669887 33322222
Q ss_pred c-----CCCceEEEEecCCCCeEEEEEeCC--------CcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEE-cC
Q 002591 706 G-----HSASVMSLDFHPNKDDLICSCDGD--------GEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAA-AE 769 (903)
Q Consensus 706 ~-----h~~~V~sl~fsp~~~~ll~sgs~D--------g~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s-~d 769 (903)
. .....+++++.++|+ ++++.... |.|..++.. ++...... ...+.++|+++++.++++. ..
T Consensus 78 ~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~ 155 (246)
T PF08450_consen 78 LPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSFN 155 (246)
T ss_dssp EETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETTT
T ss_pred ccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeeccccc
Confidence 1 345688999999987 55455433 567788877 55444443 3456799999999877654 57
Q ss_pred CeEEEEECCCCe-------EEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEE
Q 002591 770 NVVSILDAETQA-------CRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCV 841 (903)
Q Consensus 770 g~I~i~D~~t~~-------~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~ 841 (903)
+.|..||+.... ....+....+....++++.+|++.++.... .|.++|.. + +.+..+......+++|+
T Consensus 156 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G---~~~~~i~~p~~~~t~~~ 231 (246)
T PF08450_consen 156 GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-G---KLLREIELPVPRPTNCA 231 (246)
T ss_dssp TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-S---CEEEEEE-SSSSEEEEE
T ss_pred ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-c---cEEEEEcCCCCCEEEEE
Confidence 889999885321 122222222347889999999977766555 99999976 4 45555555556899999
Q ss_pred Ee-CCCCEEEEEE
Q 002591 842 FH-PTYPSLLVIG 853 (903)
Q Consensus 842 ~s-p~g~~l~t~s 853 (903)
|. ++.+.|++.+
T Consensus 232 fgg~~~~~L~vTt 244 (246)
T PF08450_consen 232 FGGPDGKTLYVTT 244 (246)
T ss_dssp EESTTSSEEEEEE
T ss_pred EECCCCCEEEEEe
Confidence 94 6767776654
No 293
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=3.4e-07 Score=97.92 Aligned_cols=249 Identities=15% Similarity=0.193 Sum_probs=150.6
Q ss_pred EEEEECCCCceeEEeccCCCCeEEEEECCCCC-EEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEE
Q 002591 647 AVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP-RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLIC 725 (903)
Q Consensus 647 V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~ 725 (903)
|++.+..+.+....+..|...|.+++|+|..+ ++..++.+.+|.|.|+++ ..++..+..+ ..+++++|.-+..++|+
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet-~~~vssy~a~-~~~wSC~wDlde~h~IY 252 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLET-SCVVSSYIAY-NQIWSCCWDLDERHVIY 252 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEeccc-ceeeeheecc-CCceeeeeccCCcceeE
Confidence 66666666666777788999999999999887 788999999999999998 6667777777 88999999999999999
Q ss_pred EEeCCCcEEEEEcCCCeeeE-Eee-----cCceeE------EEecCCCEEEEEEcCCeEEEEEC----CCCeEEEEecCC
Q 002591 726 SCDGDGEIRYWSINNGSCTR-VFK-----GGTAQM------RFQPHLGRYLAAAAENVVSILDA----ETQACRLSLQGH 789 (903)
Q Consensus 726 sgs~Dg~I~iwDi~t~~~~~-~~~-----~~~~~v------~~sp~~~~ll~~s~dg~I~i~D~----~t~~~~~~l~~h 789 (903)
.|...|.|.|||++..+-.. .+. .++..+ ...+.++.++++..+- ..|+. ....++..+. .
T Consensus 253 aGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l--~f~ei~~s~~~~p~vlele-~ 329 (463)
T KOG1645|consen 253 AGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTVL--QFYEIVFSAECLPCVLELE-P 329 (463)
T ss_pred EeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehhh--hhhhhhccccCCCcccccC-C
Confidence 99999999999998654211 111 111112 2334445555544432 23322 2222322222 3
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCC----eEEE----EECCCCCCcceEEEeecC-CCce------EEEEEeCCCCEEEEEE
Q 002591 790 TKPIDSVCWDPSGE-LLASVSED----SVRV----WTVGSGSEGECVHELSCN-GNKF------HSCVFHPTYPSLLVIG 853 (903)
Q Consensus 790 ~~~V~sl~~spdg~-~lasgs~d----~I~i----wdl~s~~~~~~i~~~~~~-~~~i------~si~~sp~g~~l~t~s 853 (903)
.+.+.++.+++..+ +|++.-.+ .++. -|.+.+.. ....-..+ +.+- ..+.-.++.++|+..+
T Consensus 330 pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~p--Vc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~g 407 (463)
T KOG1645|consen 330 PGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFP--VCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVG 407 (463)
T ss_pred CcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCce--eeeecccccCCcccccccccceeccccccEEEEec
Confidence 45555666666444 44444332 1111 11111110 00000011 1110 1122234445555444
Q ss_pred -CCCeEEEEECCCCcEEEEccCCCCEEEEEEec-CC-CEEEEEecCCcEEEcC
Q 002591 854 -CYQSLELWNMSENKTMTLTAHEGLIAALAVST-ET-GYVASASHDKFVKLWK 903 (903)
Q Consensus 854 -~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~sp-dg-~~LaSgs~DG~I~IWd 903 (903)
..+.+.+||..+.+++....-..+|.+++... ++ .||++- .|..++||+
T Consensus 408 d~tn~lil~D~~s~evvQ~l~~~epv~Dicp~~~n~~syLa~L-Td~~v~Iyk 459 (463)
T KOG1645|consen 408 DSTNELILQDPHSFEVVQTLALSEPVLDICPNDTNGSSYLALL-TDDRVHIYK 459 (463)
T ss_pred CCcceeEEeccchhheeeecccCcceeecceeecCCcchhhhe-ecceEEEEe
Confidence 34699999999999986556668888887754 33 356555 466788874
No 294
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=1.9e-07 Score=100.97 Aligned_cols=250 Identities=14% Similarity=0.153 Sum_probs=173.0
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC---CceeEEeccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCC
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDT---LKSKTNLEEHSSLITDVRFSPSMPRLATSSF-DKTVRVWDADN 696 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t---~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~-Dg~I~IWDl~~ 696 (903)
-|.+.|+.|.... .+++.+++.||.++.|.-.. -+.+..+..|...|.+++.+-++.++.+.+. |..++++|+++
T Consensus 7 mhrd~i~hv~~tk-a~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn 85 (558)
T KOG0882|consen 7 MHRDVITHVFPTK-AKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVEN 85 (558)
T ss_pred cccceeeeEeeeh-hheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeec
Confidence 3777787776543 45999999999999997442 2445667789999999999999999999888 99999999987
Q ss_pred CCce-eEEeccCCCceEEEEecCCCC--eEEEEEeCCCcEEEEEcCCCeeeEE-----eecCceeEEEecCCCEEEEEEc
Q 002591 697 PGYS-LRTFMGHSASVMSLDFHPNKD--DLICSCDGDGEIRYWSINNGSCTRV-----FKGGTAQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 697 ~~~~-~~~~~~h~~~V~sl~fsp~~~--~ll~sgs~Dg~I~iwDi~t~~~~~~-----~~~~~~~v~~sp~~~~ll~~s~ 768 (903)
-... ...+....+.+.++ .++... .+.++.-.+|.|.++|-....|... +..++..+.+.+.+..+++...
T Consensus 86 ~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~ 164 (558)
T KOG0882|consen 86 FDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDI 164 (558)
T ss_pred cchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccc
Confidence 3221 12222223333222 222211 2334445679999999876654332 2346778889999999999999
Q ss_pred CCeEEEEECCC------CeEEEE---------ecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEE---
Q 002591 769 ENVVSILDAET------QACRLS---------LQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHE--- 829 (903)
Q Consensus 769 dg~I~i~D~~t------~~~~~~---------l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~--- 829 (903)
.|.|..|..+. .+.... +........+++|+|++..+.+-+.| .|+++++++++....+.+
T Consensus 165 ~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t 244 (558)
T KOG0882|consen 165 SGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLT 244 (558)
T ss_pred cceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccch
Confidence 99999998873 112111 22234567899999999999999999 999999998743222111
Q ss_pred --------------------------eecC-CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEcc
Q 002591 830 --------------------------LSCN-GNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTA 873 (903)
Q Consensus 830 --------------------------~~~~-~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~ 873 (903)
+..+ ......++|...+++|+.++--| |+|+++.+++++.+.+
T Consensus 245 ~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~g 314 (558)
T KOG0882|consen 245 DAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILG 314 (558)
T ss_pred hhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEec
Confidence 1111 12345678999999988877654 8899999888775544
No 295
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=98.76 E-value=9.4e-08 Score=100.23 Aligned_cols=204 Identities=16% Similarity=0.275 Sum_probs=157.7
Q ss_pred ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC-CeeeE----EeecCceeEEEecCCCEEEEEEcCCeEE
Q 002591 699 YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN-GSCTR----VFKGGTAQMRFQPHLGRYLAAAAENVVS 773 (903)
Q Consensus 699 ~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t-~~~~~----~~~~~~~~v~~sp~~~~ll~~s~dg~I~ 773 (903)
..++.++||.+.|++...-|..+.++ +.+.|.++|||--+. ++.-. ....+...+.+.++...|+++-..|++.
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~-~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvt 93 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVI-SVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVT 93 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeE-EccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEE
Confidence 34677889999999888888767666 999999999996543 33222 2245677888999989999999999999
Q ss_pred EEECC----CCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCC-C---------------------------
Q 002591 774 ILDAE----TQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGS-G--------------------------- 821 (903)
Q Consensus 774 i~D~~----t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s-~--------------------------- 821 (903)
-+.+. ....++....|...|..+.|+-....+++.+.|+-..|.... +
T Consensus 94 efs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~ 173 (404)
T KOG1409|consen 94 EFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDH 173 (404)
T ss_pred EEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEeccc
Confidence 88554 334555566788888888888777777777766433443211 1
Q ss_pred -----------CCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCC
Q 002591 822 -----------SEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETG 888 (903)
Q Consensus 822 -----------~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~ 888 (903)
.....+..+.+|...+.++.|.+....|+++..|..|.+||+-.++-+ .+.+|.+.|..+...+.-+
T Consensus 174 ~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~ 253 (404)
T KOG1409|consen 174 SGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTR 253 (404)
T ss_pred ccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhhe
Confidence 112345567788889999999999999999999999999999766544 7889999999999988889
Q ss_pred EEEEEecCCcEEEcC
Q 002591 889 YVASASHDKFVKLWK 903 (903)
Q Consensus 889 ~LaSgs~DG~I~IWd 903 (903)
.+++++.||.|.+|+
T Consensus 254 ~l~S~~edg~i~~w~ 268 (404)
T KOG1409|consen 254 QLISCGEDGGIVVWN 268 (404)
T ss_pred eeeeccCCCeEEEEe
Confidence 999999999999996
No 296
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.74 E-value=4.7e-06 Score=86.47 Aligned_cols=224 Identities=16% Similarity=0.129 Sum_probs=121.2
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCC--ceeEEec---cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE
Q 002591 629 CHFSSDGKLLATGGHDKKAVLWHTDTL--KSKTNLE---EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 703 (903)
Q Consensus 629 l~fspdg~~Latgs~Dg~V~vWd~~t~--~~~~~l~---~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~ 703 (903)
++.+.+|++||+- .|..|.|=..++. ..+.+.. ...-.=..++|+||+..||.+...|+|++||+.. ..+..
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g--~~lf~ 79 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMG--SELFV 79 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEeccc--ceeEE
Confidence 5677899888876 4666776654421 1222222 2233467899999999999999999999999974 33444
Q ss_pred eccCC-------CceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEE
Q 002591 704 FMGHS-------ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILD 776 (903)
Q Consensus 704 ~~~h~-------~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D 776 (903)
+.... ..|..+.|.+. +.. ......+++...+|.++-|-
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~-------------------~~s---------------~~ws~ELlvi~Y~G~L~Sy~ 125 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEY-------------------KKS---------------AQWSYELLVINYRGQLRSYL 125 (282)
T ss_pred cCcccccCCccccceeeeEeecc-------------------ccc---------------cccceeEEEEeccceeeeEE
Confidence 43211 12222222211 100 01112344444444444333
Q ss_pred CC-----CCeEEEE--ecC-CCCCeEEEEEcCCCCEEEEEeCC-e-EEEEECCCCCCcceEEEeecCCCceEEEEEeCCC
Q 002591 777 AE-----TQACRLS--LQG-HTKPIDSVCWDPSGELLASVSED-S-VRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 777 ~~-----t~~~~~~--l~~-h~~~V~sl~~spdg~~lasgs~d-~-I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g 846 (903)
+. .....+. +.. +...|.+++|+|..++|++|+.. . -..+.. ....+++-..-.+.
T Consensus 126 vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a--------------~~~GLtaWRiL~~~ 191 (282)
T PF15492_consen 126 VSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKA--------------SSCGLTAWRILSDS 191 (282)
T ss_pred EEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccc--------------cccCceEEEEcCCC
Confidence 21 1122222 222 46789999999988877766544 2 001100 01111111111111
Q ss_pred CEE--EEEECCC------eEEEEECCCCcEEE-EccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 847 PSL--LVIGCYQ------SLELWNMSENKTMT-LTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 847 ~~l--~t~s~dg------~I~vwdl~~~~~~~-~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.+. ++...|+ +..+|.+-+.+... .....+.|..|..+|||..||+...+|.|.||+
T Consensus 192 Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~ 257 (282)
T PF15492_consen 192 PYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWE 257 (282)
T ss_pred CcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEe
Confidence 111 1111121 22344444433332 234577899999999999999999999999995
No 297
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.74 E-value=6.7e-08 Score=99.70 Aligned_cols=234 Identities=17% Similarity=0.296 Sum_probs=145.8
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce----eEEeccCC------------CceEEEEecCCC-CeEEEE
Q 002591 664 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS----LRTFMGHS------------ASVMSLDFHPNK-DDLICS 726 (903)
Q Consensus 664 h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~----~~~~~~h~------------~~V~sl~fsp~~-~~ll~s 726 (903)
..+.|++|.|...|.||++|...|.|.+|.-+....| +..|.+|. ..|..|.|..++ ..-++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 4467999999999999999999999999987653212 22344443 357778886553 334446
Q ss_pred EeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEE--------c-CCeEEEEECCCCeEEEEecCCCCCeEEEE
Q 002591 727 CDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAA--------A-ENVVSILDAETQACRLSLQGHTKPIDSVC 797 (903)
Q Consensus 727 gs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s--------~-dg~I~i~D~~t~~~~~~l~~h~~~V~sl~ 797 (903)
.+.|.+|++|.+.......+.......-.-+|.++-+.+.. . |..|... .+...-..|...|.++.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~-----p~rvyaNaH~yhiNSiS 179 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAK-----PCRVYANAHPYHINSIS 179 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEec-----cceeccccceeEeeeee
Confidence 77899999999986543222221111111122221111100 0 1111111 01111245888899999
Q ss_pred EcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCC-----CceEEEEEeCCC-CEEEEEECCCeEEEEECCCCcEE--
Q 002591 798 WDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNG-----NKFHSCVFHPTY-PSLLVIGCYQSLELWNMSENKTM-- 869 (903)
Q Consensus 798 ~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~-----~~i~si~~sp~g-~~l~t~s~dg~I~vwdl~~~~~~-- 869 (903)
|..|...++++.+=.|.+|++.-....-.+..++.|. ..|++..|+|.. ..+...+..|.|++-|++...+.
T Consensus 180 ~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn 259 (460)
T COG5170 180 FNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDN 259 (460)
T ss_pred ecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccC
Confidence 9998888776644499999987653333334444443 247788899954 55667778899999999833211
Q ss_pred -------EE--------ccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 870 -------TL--------TAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 870 -------~~--------~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.+ ..-...|..+.|+++|+||++-+. -+|+|||
T Consensus 260 ~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwD 307 (460)
T COG5170 260 SKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWD 307 (460)
T ss_pred chhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEe
Confidence 11 112357889999999999987653 4799997
No 298
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=98.72 E-value=1.9e-07 Score=105.43 Aligned_cols=230 Identities=15% Similarity=0.180 Sum_probs=161.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC--------------ceeEEeccCCCceEEEEecCCCCeEEEEEeC
Q 002591 664 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG--------------YSLRTFMGHSASVMSLDFHPNKDDLICSCDG 729 (903)
Q Consensus 664 h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~--------------~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~ 729 (903)
......|+.|+.+..+|++|+.||.++|..+.+.. ..-.++.||...|.-+.|+..... +.+.+.
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QK-LTtSDt 91 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQK-LTTSDT 91 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEecccccc-ccccCC
Confidence 34568899999999999999999999999876421 112467799999999999987554 458888
Q ss_pred CCcEEEEEcCCCeeeEE-----eecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEE-EecCCCCCeEEEEEcCCCC
Q 002591 730 DGEIRYWSINNGSCTRV-----FKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRL-SLQGHTKPIDSVCWDPSGE 803 (903)
Q Consensus 730 Dg~I~iwDi~t~~~~~~-----~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~-~l~~h~~~V~sl~~spdg~ 803 (903)
+|.|.+|-+-.+..... -+.-+.+++|..+|..+.....||.|.+=.++..+.-. .++ ......+.|++|.+
T Consensus 92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLk--g~~l~hv~ws~D~~ 169 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELK--GQLLAHVLWSEDLE 169 (1189)
T ss_pred CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcc--hheccceeecccHH
Confidence 99999999877753322 12346778999999999999999988776655432211 111 12344678999988
Q ss_pred EEEEEeCC-eEEEEECCCCCC----cceEE----EeecCCCceEEEEE--------eCCCCEEEEEECCCeEEEEECCCC
Q 002591 804 LLASVSED-SVRVWTVGSGSE----GECVH----ELSCNGNKFHSCVF--------HPTYPSLLVIGCYQSLELWNMSEN 866 (903)
Q Consensus 804 ~lasgs~d-~I~iwdl~s~~~----~~~i~----~~~~~~~~i~si~~--------sp~g~~l~t~s~dg~I~vwdl~~~ 866 (903)
.+..+-.. .+.+||....-. ..|.. .+......|..+.| -|+.+.|+++-.+|.+.|..-.+.
T Consensus 170 ~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND 249 (1189)
T KOG2041|consen 170 QALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEND 249 (1189)
T ss_pred HHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCC
Confidence 66655555 889998754311 11211 11222334555555 357888999999999988865554
Q ss_pred cEEEEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 867 KTMTLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 867 ~~~~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
..-.+....-.|....|+++|..|+.++.|
T Consensus 250 ~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~ 279 (1189)
T KOG2041|consen 250 PEPVVVDTGMKIVGAKWNHNGAVLAVCGND 279 (1189)
T ss_pred CCCeEEecccEeecceecCCCcEEEEccCc
Confidence 433344444778899999999999999865
No 299
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.71 E-value=1.4e-06 Score=88.83 Aligned_cols=196 Identities=11% Similarity=0.062 Sum_probs=129.7
Q ss_pred CCcEEEEeCCCCCc-eeEEeccCCCceEEEEecCC----CCeEEEEEeCCCcEEEEEcCCCeeeE-EeecCceeEE----
Q 002591 686 DKTVRVWDADNPGY-SLRTFMGHSASVMSLDFHPN----KDDLICSCDGDGEIRYWSINNGSCTR-VFKGGTAQMR---- 755 (903)
Q Consensus 686 Dg~I~IWDl~~~~~-~~~~~~~h~~~V~sl~fsp~----~~~ll~sgs~Dg~I~iwDi~t~~~~~-~~~~~~~~v~---- 755 (903)
...|.+|++.+..+ .+..+.+ +.|.|. ...+|+.|+..|...+|...+..... ........+.
T Consensus 51 t~sv~i~~~y~N~~~iv~~y~g-------~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r 123 (344)
T KOG4532|consen 51 TISVPINSHYSNPKGIVEFYTG-------MTFTPGSFINKCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKR 123 (344)
T ss_pred eeeeEeccccCCchhhEEeeec-------ccccchHhhccccEEEeccccceeeeecccCcccceeeecccccchhhhhh
Confidence 34588888876443 2333332 444442 23367788889999999998665322 2222222222
Q ss_pred EecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCC
Q 002591 756 FQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNG 834 (903)
Q Consensus 756 ~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~ 834 (903)
+....-.+..++.|.++++++++-+.....+....-.+.++.+++|++++++.++. .|..|.+....+...........
T Consensus 124 ~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~ 203 (344)
T KOG4532|consen 124 YCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTS 203 (344)
T ss_pred hcccccceeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccC
Confidence 12222456777888888888776654433332222338899999999999999888 89999997654422222333334
Q ss_pred CceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE------EEccCCCCEEEEEEecCCC
Q 002591 835 NKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM------TLTAHEGLIAALAVSTETG 888 (903)
Q Consensus 835 ~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~------~~~~h~~~V~sl~~spdg~ 888 (903)
..-.+..|+.....++++..||++.|||++..... ....|.+.|+.+.|++-|.
T Consensus 204 D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~ 263 (344)
T KOG4532|consen 204 DHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGL 263 (344)
T ss_pred CCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCc
Confidence 45567789999999999999999999999875533 3446899999999998654
No 300
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.71 E-value=2.9e-06 Score=97.18 Aligned_cols=253 Identities=11% Similarity=0.094 Sum_probs=151.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCCC----------CeE-EEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSS----------LIT-DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 703 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~----------~V~-~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~ 703 (903)
+..+++++.++.|.-+|.++++.+-....... .+. .+.. ++..++.++.+|.|+.+|.++ ++.+..
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~t-G~~~W~ 145 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAED-GEVAWQ 145 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCC-CCCccc
Confidence 55777788889999999999988776643221 000 0111 345778888899999999988 555554
Q ss_pred eccCCCceEE-EEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEE----Eec--CCCEEEEEEcCCeEEEEE
Q 002591 704 FMGHSASVMS-LDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMR----FQP--HLGRYLAAAAENVVSILD 776 (903)
Q Consensus 704 ~~~h~~~V~s-l~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~----~sp--~~~~ll~~s~dg~I~i~D 776 (903)
..... .+.+ .... ++ .++.+..++.|..+|.++++.+..+......+. .+| .++.++++..++.+..+|
T Consensus 146 ~~~~~-~~~ssP~v~--~~-~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~d 221 (394)
T PRK11138 146 TKVAG-EALSRPVVS--DG-LVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAVL 221 (394)
T ss_pred ccCCC-ceecCCEEE--CC-EEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEEE
Confidence 44322 2221 1222 23 344677789999999999998877654321110 011 245678888899999999
Q ss_pred CCCCeEEEEecCCCC-------CeEEEEEcC--CCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC
Q 002591 777 AETQACRLSLQGHTK-------PIDSVCWDP--SGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY 846 (903)
Q Consensus 777 ~~t~~~~~~l~~h~~-------~V~sl~~sp--dg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g 846 (903)
..+++.+........ ....+..+| .+..++.++.+ .+..+|..+++. +..... .....+. ..+
T Consensus 222 ~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~---~W~~~~--~~~~~~~--~~~ 294 (394)
T PRK11138 222 MEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQI---VWKREY--GSVNDFA--VDG 294 (394)
T ss_pred ccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCE---EEeecC--CCccCcE--EEC
Confidence 999987765432110 011111122 23445555555 899999988743 222111 1111122 246
Q ss_pred CEEEEEECCCeEEEEECCCCcEEEEc-cCC-CCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 847 PSLLVIGCYQSLELWNMSENKTMTLT-AHE-GLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 847 ~~l~t~s~dg~I~vwdl~~~~~~~~~-~h~-~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
..|++++.++.|..+|..+++.+... ... ....+..+ .+.+|+.++.||.|++.|
T Consensus 295 ~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld 351 (394)
T PRK11138 295 GRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWIN 351 (394)
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEE
Confidence 67888999999999999999876322 111 11222222 245677778888877653
No 301
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.69 E-value=1.5e-05 Score=85.20 Aligned_cols=246 Identities=14% Similarity=0.122 Sum_probs=161.2
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCc-EEEEECCCCceeEEeccCCCCe--EEEEECCCCCEEEEEeC-----CCcEEEEeCC
Q 002591 625 KVICCHFSS-DGKLLATGGHDKK-AVLWHTDTLKSKTNLEEHSSLI--TDVRFSPSMPRLATSSF-----DKTVRVWDAD 695 (903)
Q Consensus 625 ~V~~l~fsp-dg~~Latgs~Dg~-V~vWd~~t~~~~~~l~~h~~~V--~~l~fspdg~~Lasgs~-----Dg~I~IWDl~ 695 (903)
....++.+| +...+|.+-.-|+ ..+||..+++....+....+.- -.-+|++||++|++.-. .|.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 344677888 5567777777665 6789999998887776433322 24679999999998743 5889999999
Q ss_pred CCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEE
Q 002591 696 NPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSIL 775 (903)
Q Consensus 696 ~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~ 775 (903)
.....+..|..|.-.-..|.+.|+++.|++.- |-|.-- .++++. ++=....+-.+.+.
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVAN---GGI~Th-pd~GR~------------------kLNl~tM~psL~~l 143 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVAN---GGIETH-PDSGRA------------------KLNLDTMQPSLVYL 143 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEEc---CCCccC-cccCce------------------ecChhhcCCceEEE
Confidence 65677888888887778899999997776432 323211 111111 11122334556777
Q ss_pred ECCCCeEEEEec----CCCCCeEEEEEcCCCCEEEEEeCC--------eEEEEECCCCCCcceEEE----eecCCCceEE
Q 002591 776 DAETQACRLSLQ----GHTKPIDSVCWDPSGELLASVSED--------SVRVWTVGSGSEGECVHE----LSCNGNKFHS 839 (903)
Q Consensus 776 D~~t~~~~~~l~----~h~~~V~sl~~spdg~~lasgs~d--------~I~iwdl~s~~~~~~i~~----~~~~~~~i~s 839 (903)
|.++++.+.... -|.-.|..+++..+|..++..-.. -|.+++.... ...+.. ...-.+.+-+
T Consensus 144 d~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~--~~~~~~p~~~~~~l~~Y~gS 221 (305)
T PF07433_consen 144 DARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGA--LRLLPAPEEQWRRLNGYIGS 221 (305)
T ss_pred ecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCc--ceeccCChHHHHhhCCceEE
Confidence 888888776633 377789999999998876655321 2444544321 111110 1223567899
Q ss_pred EEEeCCCCEEEEEECC-CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 840 CVFHPTYPSLLVIGCY-QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 840 i~~sp~g~~l~t~s~d-g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
|+++.++..+++.+-- +.+.+||..+++.+....- ..++.++..+++ +++|.+.-
T Consensus 222 Ia~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l-~D~cGva~~~~~-f~~ssG~G 277 (305)
T PF07433_consen 222 IAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL-PDACGVAPTDDG-FLVSSGQG 277 (305)
T ss_pred EEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc-CceeeeeecCCc-eEEeCCCc
Confidence 9999999988777655 6999999999998844332 235666666665 56655543
No 302
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.65 E-value=1.5e-07 Score=100.92 Aligned_cols=122 Identities=20% Similarity=0.235 Sum_probs=89.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE
Q 002591 624 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 703 (903)
Q Consensus 624 ~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~ 703 (903)
..|+.+..+........++....+.+|....+. ...+-+|-..+++|+|+||+++|+++..|..|||-........-..
T Consensus 111 ~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~-~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Iesf 189 (390)
T KOG3914|consen 111 TAISFIREDTSVLVADKAGDVYSFDILSADSGR-CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESF 189 (390)
T ss_pred ceeeeeeccceEEEEeecCCceeeeeecccccC-cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhh
Confidence 334444443333223334444556666655533 3344589999999999999999999999999999888763333334
Q ss_pred eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee
Q 002591 704 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 748 (903)
Q Consensus 704 ~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~ 748 (903)
..||+..|..++..++ +.|++++.|++|++||+++++++.++.
T Consensus 190 clGH~eFVS~isl~~~--~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 190 CLGHKEFVSTISLTDN--YLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred ccccHhheeeeeeccC--ceeeecCCCCcEEEEecccCCcccccc
Confidence 5589999999999865 356799999999999999999887764
No 303
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.64 E-value=2e-08 Score=115.34 Aligned_cols=201 Identities=15% Similarity=0.285 Sum_probs=148.7
Q ss_pred CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCC-c
Q 002591 654 TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG-E 732 (903)
Q Consensus 654 t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg-~ 732 (903)
..+..++|+.|+...+|++|+-+.+.|+.|+..|.|++|++.+ +.....+.+|..+|+-+.-+.+|..+|.+++... .
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~s-G~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pl 1168 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSS-GSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPL 1168 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccC-ccccccccccccccccccccCCcceeeeeccccCch
Confidence 4566778889999999999999999999999999999999998 7777888999999999999999887775555544 5
Q ss_pred EEEEEcCC-CeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEec-C---CCCCeEEEEEcCCCCEEEE
Q 002591 733 IRYWSINN-GSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQ-G---HTKPIDSVCWDPSGELLAS 807 (903)
Q Consensus 733 I~iwDi~t-~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~-~---h~~~V~sl~~spdg~~las 807 (903)
..+|++.. +...+.|. ...++.|+.....-++++......+||+.++.++.++. + ....-+++.|+|+.++|+-
T Consensus 1169 saLW~~~s~~~~~Hsf~-ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln 1247 (1516)
T KOG1832|consen 1169 SALWDASSTGGPRHSFD-EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN 1247 (1516)
T ss_pred HHHhccccccCcccccc-ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee
Confidence 77999875 33444444 34567777766566667777889999999987766532 1 2223467889998887764
Q ss_pred EeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 808 VSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 808 gs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
-+ .+||++... .++.+.... ....-.|||.|..+++-+ .|||+++.+.+
T Consensus 1248 dG----vLWDvR~~~---aIh~FD~ft-~~~~G~FHP~g~eVIINS-----EIwD~RTF~lL 1296 (1516)
T KOG1832|consen 1248 DG----VLWDVRIPE---AIHRFDQFT-DYGGGGFHPSGNEVIINS-----EIWDMRTFKLL 1296 (1516)
T ss_pred Cc----eeeeeccHH---HHhhhhhhe-ecccccccCCCceEEeec-----hhhhhHHHHHH
Confidence 32 689998763 333332211 112236999999888865 58999987765
No 304
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.63 E-value=1.2e-06 Score=93.99 Aligned_cols=245 Identities=12% Similarity=0.084 Sum_probs=151.7
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCC-EEEEEeCCCcE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMP-RLATSSFDKTV 689 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~-~Lasgs~Dg~I 689 (903)
+|+....+.+|...|.+++|||..+ +|..++.+.+|+|.|+++...+..+..+ ..+++++|.-|.. +|++|...|.|
T Consensus 182 ~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~V 260 (463)
T KOG1645|consen 182 DFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMV 260 (463)
T ss_pred CcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceE
Confidence 5666667889999999999999877 7888999999999999999999999888 7899999988765 67777789999
Q ss_pred EEEeCCCCCceeEEecc--CCCceEEEEecC------CCCeEEEEEeCCCcEEEEEcCCC----eeeEEeec--CceeEE
Q 002591 690 RVWDADNPGYSLRTFMG--HSASVMSLDFHP------NKDDLICSCDGDGEIRYWSINNG----SCTRVFKG--GTAQMR 755 (903)
Q Consensus 690 ~IWDl~~~~~~~~~~~~--h~~~V~sl~fsp------~~~~ll~sgs~Dg~I~iwDi~t~----~~~~~~~~--~~~~v~ 755 (903)
.|||++.+...+..+.+ ...+|..|+.-+ .+. +++.... .+..|++... .++..++. ....+.
T Consensus 261 lvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gg-lLv~~lt--~l~f~ei~~s~~~~p~vlele~pG~cismq 337 (463)
T KOG1645|consen 261 LVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGG-LLVFALT--VLQFYEIVFSAECLPCVLELEPPGICISMQ 337 (463)
T ss_pred EEEEccCCCchHhhhhhhhccCcceeecccCccccccccc-eEEeeeh--hhhhhhhhccccCCCcccccCCCcceeeee
Confidence 99999976555444443 223444444322 222 4433332 3556665432 22222222 233344
Q ss_pred EecCCCEEEEEEcCC--------eEEEEECCCCeEEEEec-CC-CCC------eEEEEEcCCCCEEEEEeCC--eEEEEE
Q 002591 756 FQPHLGRYLAAAAEN--------VVSILDAETQACRLSLQ-GH-TKP------IDSVCWDPSGELLASVSED--SVRVWT 817 (903)
Q Consensus 756 ~sp~~~~ll~~s~dg--------~I~i~D~~t~~~~~~l~-~h-~~~------V~sl~~spdg~~lasgs~d--~I~iwd 817 (903)
+.+..+.+++....+ .+--.|.++|..+...+ ++ ... -..+.-.++.++|+..+++ .+.+||
T Consensus 338 y~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D 417 (463)
T KOG1645|consen 338 YHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQD 417 (463)
T ss_pred ecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEec
Confidence 455456666655431 11112444444333221 12 111 0112223455677766666 899999
Q ss_pred CCCCCCcceEEEeecCCCceEEEEE-eCCCCEEEEEECCCeEEEEECC
Q 002591 818 VGSGSEGECVHELSCNGNKFHSCVF-HPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 818 l~s~~~~~~i~~~~~~~~~i~si~~-sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
..+. ..+..+.. ..+|.+++. +-++..++..-.|..++||..+
T Consensus 418 ~~s~---evvQ~l~~-~epv~Dicp~~~n~~syLa~LTd~~v~Iyk~e 461 (463)
T KOG1645|consen 418 PHSF---EVVQTLAL-SEPVLDICPNDTNGSSYLALLTDDRVHIYKNE 461 (463)
T ss_pred cchh---heeeeccc-CcceeecceeecCCcchhhheecceEEEEecC
Confidence 9887 44555444 356666664 3455556666667788888754
No 305
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.63 E-value=1.1e-07 Score=99.62 Aligned_cols=147 Identities=14% Similarity=0.218 Sum_probs=117.9
Q ss_pred EEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC----CceeEEeccCCCceEEE
Q 002591 639 ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP----GYSLRTFMGHSASVMSL 714 (903)
Q Consensus 639 atgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~----~~~~~~~~~h~~~V~sl 714 (903)
++.+.+-.|-|-|++++..- .|. ....|.++.|.-.+.+++.|+.+|.|.++|++.. +.+...+. |...|+++
T Consensus 228 fs~G~sqqv~L~nvetg~~q-sf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtsl 304 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQ-SFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSL 304 (425)
T ss_pred ecccccceeEEEEeeccccc-ccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhh
Confidence 44455667889998876432 232 5677999999998999999999999999999874 45555555 88999999
Q ss_pred EecCCCCeEEEEEeCCCcEEEEEcCCCee---eEEeecCceeEE-----EecCCCEEEEEEcCCeEEEEECCCCeEEEEe
Q 002591 715 DFHPNKDDLICSCDGDGEIRYWSINNGSC---TRVFKGGTAQMR-----FQPHLGRYLAAAAENVVSILDAETQACRLSL 786 (903)
Q Consensus 715 ~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~---~~~~~~~~~~v~-----~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l 786 (903)
.........|++.+.+|+|++||.+.-+| +..++++++..+ +.+..+.+++++.|-..+||.++.+..+.++
T Consensus 305 q~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ti 384 (425)
T KOG2695|consen 305 QILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTI 384 (425)
T ss_pred hhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeecc
Confidence 87763444566888899999999998887 888999887644 5566789999999999999999999988877
Q ss_pred cC
Q 002591 787 QG 788 (903)
Q Consensus 787 ~~ 788 (903)
..
T Consensus 385 pf 386 (425)
T KOG2695|consen 385 PF 386 (425)
T ss_pred CC
Confidence 64
No 306
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.60 E-value=6.3e-07 Score=90.93 Aligned_cols=165 Identities=13% Similarity=0.150 Sum_probs=109.2
Q ss_pred eeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-ceeEEeccCCCCeEEEEECCCCCEEEEEeC-----CC
Q 002591 614 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTL-KSKTNLEEHSSLITDVRFSPSMPRLATSSF-----DK 687 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~-~~~~~l~~h~~~V~~l~fspdg~~Lasgs~-----Dg 687 (903)
....++..|.++-.+-+.+-.++.++++..||.+.+++.+.. .....+..-...-.+.++...++.|.++.. -+
T Consensus 80 ~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d 159 (319)
T KOG4714|consen 80 DPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQD 159 (319)
T ss_pred CceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeecc
Confidence 344455566666666666667788999999999999997742 122222221222223333334444444421 23
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee----EEeecCceeEEEecCC-CE
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT----RVFKGGTAQMRFQPHL-GR 762 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~----~~~~~~~~~v~~sp~~-~~ 762 (903)
..++|+++-.+..+.... ....|.+++-+|.-.+++++|+.||.|-+||.+..... +..+..+..+.|+|.+ ..
T Consensus 160 ~~~a~~~~p~~t~~~~~~-~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~ 238 (319)
T KOG4714|consen 160 NFYANTLDPIKTLIPSKK-ALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEH 238 (319)
T ss_pred ceeeeccccccccccccc-ccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchh
Confidence 466777765222222222 23449999999998899999999999999999987533 2335567788999877 67
Q ss_pred EEEEEcCCeEEEEECCC
Q 002591 763 YLAAAAENVVSILDAET 779 (903)
Q Consensus 763 ll~~s~dg~I~i~D~~t 779 (903)
|++++.||.+.-||..+
T Consensus 239 Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 239 LFTCSEDGSLWHWDAST 255 (319)
T ss_pred eeEecCCCcEEEEcCCC
Confidence 89999999999999765
No 307
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.54 E-value=1.7e-05 Score=83.84 Aligned_cols=208 Identities=14% Similarity=0.114 Sum_probs=129.8
Q ss_pred CCcEEEEeCCCCCceeEEeccC--CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec--CceeEEEecCCC
Q 002591 686 DKTVRVWDADNPGYSLRTFMGH--SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG--GTAQMRFQPHLG 761 (903)
Q Consensus 686 Dg~I~IWDl~~~~~~~~~~~~h--~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~ 761 (903)
+|+|..||..+ ++.+....-- .....+..+ ++++.++ +++.++.|+.||+.+++.+..+.. ..... ....++
T Consensus 2 ~g~l~~~d~~t-G~~~W~~~~~~~~~~~~~~~~-~~~~~v~-~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~-~~~~~~ 77 (238)
T PF13360_consen 2 DGTLSALDPRT-GKELWSYDLGPGIGGPVATAV-PDGGRVY-VASGDGNLYALDAKTGKVLWRFDLPGPISGA-PVVDGG 77 (238)
T ss_dssp TSEEEEEETTT-TEEEEEEECSSSCSSEEETEE-EETTEEE-EEETTSEEEEEETTTSEEEEEEECSSCGGSG-EEEETT
T ss_pred CCEEEEEECCC-CCEEEEEECCCCCCCccceEE-EeCCEEE-EEcCCCEEEEEECCCCCEEEEeeccccccce-eeeccc
Confidence 68899999987 5555555421 122221122 2345454 667899999999999998877653 21122 245567
Q ss_pred EEEEEEcCCeEEEEECCCCeEEEEe-cCCC---CCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCc
Q 002591 762 RYLAAAAENVVSILDAETQACRLSL-QGHT---KPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 762 ~ll~~s~dg~I~i~D~~t~~~~~~l-~~h~---~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
.+++++.++.|+.+|.++++.+..+ .... ..........++..++++..+ .|..+|++++ +.+.........
T Consensus 78 ~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG---~~~w~~~~~~~~ 154 (238)
T PF13360_consen 78 RVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTG---KLLWKYPVGEPR 154 (238)
T ss_dssp EEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTT---EEEEEEESSTT-
T ss_pred ccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCC---cEEEEeecCCCC
Confidence 8888888899999999999999884 3221 112222233337777777755 9999999988 444444332211
Q ss_pred ----------eEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 837 ----------FHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 837 ----------i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+..-....++ .++++..++.+..+|+.+++.+. ......+..+ ...++..|+.++.++.|.+||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w-~~~~~~~~~~-~~~~~~~l~~~~~~~~l~~~d 228 (238)
T PF13360_consen 155 GSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLW-SKPISGIYSL-PSVDGGTLYVTSSDGRLYALD 228 (238)
T ss_dssp SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEE-EECSS-ECEC-EECCCTEEEEEETTTEEEEEE
T ss_pred CCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEE-EecCCCccCC-ceeeCCEEEEEeCCCEEEEEE
Confidence 1122222244 78888888854444999999763 2223333332 346777888888999999886
No 308
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.52 E-value=1.1e-06 Score=95.12 Aligned_cols=207 Identities=16% Similarity=0.138 Sum_probs=149.2
Q ss_pred eeeeeEeecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCceeEEecc--CCCCeEEEEECCCC-C-EEEEE-eCC
Q 002591 613 FKEANSVRASTSKVICCHFSSDGKLLATGGH-DKKAVLWHTDTLKSKTNLEE--HSSLITDVRFSPSM-P-RLATS-SFD 686 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspdg~~Latgs~-Dg~V~vWd~~t~~~~~~l~~--h~~~V~~l~fspdg-~-~Lasg-s~D 686 (903)
.+.+..++.|...|.+++.+-+|.+++|.+. |..++++|+++...+.-++. -.+.+.++ .++.. . .|+++ -.+
T Consensus 43 vEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~s 121 (558)
T KOG0882|consen 43 VEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKS 121 (558)
T ss_pred eeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccC
Confidence 4556778899999999999999999999777 99999999987655533332 22222222 22221 1 33333 348
Q ss_pred CcEEEEeCCCCCcee-EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC------CeeeEEe------------
Q 002591 687 KTVRVWDADNPGYSL-RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN------GSCTRVF------------ 747 (903)
Q Consensus 687 g~I~IWDl~~~~~~~-~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t------~~~~~~~------------ 747 (903)
+.|.|+|-....... ..-.-|..+|.++.+.+.++..+ +....|.|..|..+. .+....+
T Consensus 122 g~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~v-SiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~ 200 (558)
T KOG0882|consen 122 GKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAV-SIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKA 200 (558)
T ss_pred CCcEEECCcCCcCccceecccccCceEEEEeecccccee-eccccceeEeecCCCcccCccccccccccccchhhccccc
Confidence 999999987644333 34445999999999999987554 888889999999873 1111111
Q ss_pred ecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecC--------------------------------CC-CCeE
Q 002591 748 KGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQG--------------------------------HT-KPID 794 (903)
Q Consensus 748 ~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~--------------------------------h~-~~V~ 794 (903)
+....+++|+|++..+...+.|..|++++.++++.+..+.. |. ..-+
T Consensus 201 Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~ 280 (558)
T KOG0882|consen 201 KTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGT 280 (558)
T ss_pred ccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccc
Confidence 23456799999999999999999999999999876654321 11 1235
Q ss_pred EEEEcCCCCEEEEEeCCeEEEEECCCC
Q 002591 795 SVCWDPSGELLASVSEDSVRVWTVGSG 821 (903)
Q Consensus 795 sl~~spdg~~lasgs~d~I~iwdl~s~ 821 (903)
.++|+..|++|+.++.=.|+|.++.++
T Consensus 281 ~~~fdes~~flly~t~~gikvin~~tn 307 (558)
T KOG0882|consen 281 NAVFDESGNFLLYGTILGIKVINLDTN 307 (558)
T ss_pred eeEEcCCCCEEEeecceeEEEEEeecC
Confidence 678999999999888778999998876
No 309
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.52 E-value=2.1e-05 Score=90.15 Aligned_cols=222 Identities=13% Similarity=0.135 Sum_probs=124.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe
Q 002591 663 EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS 742 (903)
Q Consensus 663 ~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~ 742 (903)
...-....+.++|+|++++++ .||...||.... .. -.. .+....++|...+. +|+-...+.|.|+.--..+
T Consensus 30 ~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~-~r-~k~----~G~g~~~vw~~~n~--yAv~~~~~~I~I~kn~~~~ 100 (443)
T PF04053_consen 30 SCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALA-WR-NKA----FGSGLSFVWSSRNR--YAVLESSSTIKIYKNFKNE 100 (443)
T ss_dssp E-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTT-TE-EEE----EEE-SEEEE-TSSE--EEEE-TTS-EEEEETTEE-
T ss_pred CCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccC-Cc-ccc----cCceeEEEEecCcc--EEEEECCCeEEEEEcCccc
Confidence 344557899999999999884 478888887432 11 111 23345588888443 4466668889997433333
Q ss_pred eeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCC-
Q 002591 743 CTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSG- 821 (903)
Q Consensus 743 ~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~- 821 (903)
..+.+..+...-.+.. +.++....++.|.+||+.+++.+..+... +|..|.|++++.+++..+.+.+.|++....
T Consensus 101 ~~k~i~~~~~~~~If~--G~LL~~~~~~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~~i~il~~~~~~ 176 (443)
T PF04053_consen 101 VVKSIKLPFSVEKIFG--GNLLGVKSSDFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKDSIYILKYNLEA 176 (443)
T ss_dssp TT-----SS-EEEEE---SSSEEEEETTEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHH
T ss_pred cceEEcCCcccceEEc--CcEEEEECCCCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCCeEEEEEecchh
Confidence 3334444432222222 44555556669999999999999998743 489999999999999999998888776432
Q ss_pred -----CC--cceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEe
Q 002591 822 -----SE--GECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASAS 894 (903)
Q Consensus 822 -----~~--~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs 894 (903)
++ ...+..+..-...|.+.+|..+ .|+-.+.. +|+. +-.|+...+..-+.++.=+.+.+....|+...
T Consensus 177 ~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~~~i~~ld~~~yllgy~~~~~~ly~~D 251 (443)
T PF04053_consen 177 VAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGETGIIAHLDKPLYLLGYLPKENRLYLID 251 (443)
T ss_dssp HHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEEEEEEE-SS--EEEEEETTTTEEEEE-
T ss_pred cccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCcceEEEcCCceEEEEEEccCCEEEEEE
Confidence 00 0122333222567888899877 44444444 7776 55666666666677888888888778888888
Q ss_pred cCCcEEEc
Q 002591 895 HDKFVKLW 902 (903)
Q Consensus 895 ~DG~I~IW 902 (903)
.|+.|..+
T Consensus 252 r~~~v~~~ 259 (443)
T PF04053_consen 252 RDGNVISY 259 (443)
T ss_dssp TT--EEEE
T ss_pred CCCCEEEE
Confidence 88887654
No 310
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.52 E-value=3.7e-06 Score=98.12 Aligned_cols=175 Identities=15% Similarity=0.175 Sum_probs=129.6
Q ss_pred EEEEEeCCCcEEEEEcCCCeeeEEeecCceeEE-EecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCC
Q 002591 723 LICSCDGDGEIRYWSINNGSCTRVFKGGTAQMR-FQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPS 801 (903)
Q Consensus 723 ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~-~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spd 801 (903)
.++-|+--..+..+|+++.+..+...-....+. ...++..+++|...|+|.+-|.++.+.++++..|.+.|..+...
T Consensus 149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~-- 226 (1118)
T KOG1275|consen 149 TLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDVQ-- 226 (1118)
T ss_pred ceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeecc--
Confidence 344677777888999999988777654442333 33445677888889999999999999999999999999866554
Q ss_pred CCEEEEEeC---------C-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC-CEEEEEECCCeEEEEE---CCCCc
Q 002591 802 GELLASVSE---------D-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY-PSLLVIGCYQSLELWN---MSENK 867 (903)
Q Consensus 802 g~~lasgs~---------d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g-~~l~t~s~dg~I~vwd---l~~~~ 867 (903)
|++|++|+. | .|+|||+++......+... .. ..-+.|+|.. ..+++++..|...+.| +.+..
T Consensus 227 GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~---~~-P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~ 302 (1118)
T KOG1275|consen 227 GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFP---YG-PQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPP 302 (1118)
T ss_pred CCeEEEeecccccccccccchhhhhhhhhhhccCCcccc---cC-chhhhhcccccceEEEEecccceeeccccccCCCc
Confidence 898988874 3 5899999886443333221 11 1345678864 4588888999999998 44332
Q ss_pred EE--EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 868 TM--TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 868 ~~--~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.- .+......+.++++++++..++.|..+|.|.+|.
T Consensus 303 ~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 303 AGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 22 3334455699999999999999999999999994
No 311
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.52 E-value=1.6e-06 Score=88.02 Aligned_cols=160 Identities=16% Similarity=0.157 Sum_probs=96.5
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEe-----CCCcEE
Q 002591 660 NLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD-----GDGEIR 734 (903)
Q Consensus 660 ~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs-----~Dg~I~ 734 (903)
.+..|.++-.+-+.+--+..++++..||.+.+++.+......+.+..-...-.+.++...++ ++.++. .-+..+
T Consensus 84 ~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~-~i~s~~~g~~n~~d~~~ 162 (319)
T KOG4714|consen 84 VLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGN-SILSGGCGNWNAQDNFY 162 (319)
T ss_pred eeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeeccc-EEecCCcceEeecccee
Confidence 33344444334444445678999999999999998752221122211111112233333333 332221 123455
Q ss_pred EEEcCCCeeeEEe---ecCceeEEEecCCCEEEE-EEcCCeEEEEECCCCe-EEEEecCCCCCeEEEEEcCC-CCEEEEE
Q 002591 735 YWSINNGSCTRVF---KGGTAQMRFQPHLGRYLA-AAAENVVSILDAETQA-CRLSLQGHTKPIDSVCWDPS-GELLASV 808 (903)
Q Consensus 735 iwDi~t~~~~~~~---~~~~~~v~~sp~~~~ll~-~s~dg~I~i~D~~t~~-~~~~l~~h~~~V~sl~~spd-g~~lasg 808 (903)
+|+++-.+....- ...+..++.+|.-..+++ |+.||.+.+||.+... ++..+..|+.+|..+-|+|. +..|+++
T Consensus 163 a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~ 242 (319)
T KOG4714|consen 163 ANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTC 242 (319)
T ss_pred eecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEe
Confidence 6665543322111 123667778887765554 5568999999999874 34456789999999999994 5588899
Q ss_pred eCC-eEEEEECCC
Q 002591 809 SED-SVRVWTVGS 820 (903)
Q Consensus 809 s~d-~I~iwdl~s 820 (903)
++| .+..||..+
T Consensus 243 sedGslw~wdas~ 255 (319)
T KOG4714|consen 243 SEDGSLWHWDAST 255 (319)
T ss_pred cCCCcEEEEcCCC
Confidence 988 999999764
No 312
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.52 E-value=2.7e-06 Score=91.49 Aligned_cols=158 Identities=13% Similarity=0.122 Sum_probs=106.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc----eeEEeccCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCC
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLK----SKTNLEEHSSLITDVRFSPSMPRLATSSF---DKTVRVWDADNP 697 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~----~~~~l~~h~~~V~~l~fspdg~~Lasgs~---Dg~I~IWDl~~~ 697 (903)
.+..+.+++++++||++..++...++++.... ..... .-...-+++.|..+...+..+.. ...+.+|....
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~-~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~- 141 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVS-CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS- 141 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEe-ecccCcceeeeeeccceEEEEeecCCceeeeeecccc-
Confidence 45556678888999998888887777765322 22222 22233345555555555544444 44455555543
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----CceeEEEecCCCEEEEEEcCCeEE
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----GTAQMRFQPHLGRYLAAAAENVVS 773 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----~~~~v~~sp~~~~ll~~s~dg~I~ 773 (903)
.+.+.+.||-..++.++|+||+. +|++++.|..||+-....--.+..|-- -+..++..++ ..|++++.|++|+
T Consensus 142 -~~~~~~lGhvSml~dVavS~D~~-~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr 218 (390)
T KOG3914|consen 142 -GRCEPILGHVSMLLDVAVSPDDQ-FIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLR 218 (390)
T ss_pred -cCcchhhhhhhhhheeeecCCCC-EEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEE
Confidence 45667778999999999999976 555999999999987766555544432 2444555444 4488999999999
Q ss_pred EEECCCCeEEEEec
Q 002591 774 ILDAETQACRLSLQ 787 (903)
Q Consensus 774 i~D~~t~~~~~~l~ 787 (903)
+||+++++++.++.
T Consensus 219 ~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 219 LWDITSGKLLDTCD 232 (390)
T ss_pred EEecccCCcccccc
Confidence 99999999886654
No 313
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.51 E-value=8.3e-05 Score=83.82 Aligned_cols=258 Identities=15% Similarity=0.156 Sum_probs=151.0
Q ss_pred cCCCCEEEEEe---------CCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 632 SSDGKLLATGG---------HDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 632 spdg~~Latgs---------~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
|||+++++... ..+.+.|||+++++....... ...+....|+|+|+.|+... ++.|.++++.+......
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~l 78 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQL 78 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEES
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEe
Confidence 57888777642 346789999998655444433 67899999999999999887 67899999876322112
Q ss_pred Eecc-------C---------CCceEEEEecCCCCeEEEEEeCCCcEEEEE-----------------------------
Q 002591 703 TFMG-------H---------SASVMSLDFHPNKDDLICSCDGDGEIRYWS----------------------------- 737 (903)
Q Consensus 703 ~~~~-------h---------~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwD----------------------------- 737 (903)
+..+ - -+.-..+.|+|++.++++.--++..|+.+.
T Consensus 79 T~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v 158 (353)
T PF00930_consen 79 TTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRV 158 (353)
T ss_dssp ES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EE
T ss_pred ccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCce
Confidence 2222 0 112345889999998876655555444433
Q ss_pred ------cCCCeeeEEe-e-------cCceeEEEecCCCEEEEEEcC-----CeEEEEECCCCeEEEEecC-CCCCe---E
Q 002591 738 ------INNGSCTRVF-K-------GGTAQMRFQPHLGRYLAAAAE-----NVVSILDAETQACRLSLQG-HTKPI---D 794 (903)
Q Consensus 738 ------i~t~~~~~~~-~-------~~~~~v~~sp~~~~ll~~s~d-----g~I~i~D~~t~~~~~~l~~-h~~~V---~ 794 (903)
+.+++....- . .-+..+.|.+++..+++.-.+ -.+.++|..++.+...+.. ....| .
T Consensus 159 ~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~ 238 (353)
T PF00930_consen 159 SLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYD 238 (353)
T ss_dssp EEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSS
T ss_pred EEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeec
Confidence 3333221100 0 012346788887745554432 2677778887754433322 23333 3
Q ss_pred EEEEc-CCCC-EEEEEeCC---eEEEEECCCCCCcceEEEeecCCCceEE-EEEeCCCCEEEEEECC-----CeEEEEEC
Q 002591 795 SVCWD-PSGE-LLASVSED---SVRVWTVGSGSEGECVHELSCNGNKFHS-CVFHPTYPSLLVIGCY-----QSLELWNM 863 (903)
Q Consensus 795 sl~~s-pdg~-~lasgs~d---~I~iwdl~s~~~~~~i~~~~~~~~~i~s-i~~sp~g~~l~t~s~d-----g~I~vwdl 863 (903)
.+.|. +++. +|.....+ .|.+++...+. ...+......|.. +.++++++.|+..+.. ..|+..++
T Consensus 239 ~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~----~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~ 314 (353)
T PF00930_consen 239 PPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK----PRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSL 314 (353)
T ss_dssp EEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE----EEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEET
T ss_pred ccccccCCCCEEEEEEEcCCCcEEEEEcccccc----eeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEe
Confidence 55655 6666 44444444 68888876642 3345444556644 6688888777655543 36777788
Q ss_pred C-CCcEEEEccCCCCEEEEEEecCCCEEEEEec
Q 002591 864 S-ENKTMTLTAHEGLIAALAVSTETGYVASASH 895 (903)
Q Consensus 864 ~-~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~ 895 (903)
. .+....+.........+.|+|++++++-.+.
T Consensus 315 ~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 315 DSGGEPKCLTCEDGDHYSASFSPDGKYYVDTYS 347 (353)
T ss_dssp TETTEEEESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred CCCCCeEeccCCCCCceEEEECCCCCEEEEEEc
Confidence 8 6666666554444479999999998776543
No 314
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.50 E-value=2.5e-05 Score=94.25 Aligned_cols=241 Identities=12% Similarity=0.161 Sum_probs=151.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
..+.|.++.|.-+..-|+.+..+|.|.+-|.++.. ......-...|.+++|+||...++..+.+++|.+-+-. -.++
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~-~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~--f~~i 143 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLE-LEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTKD--FEPI 143 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEcccccc-eeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEecc--ccch
Confidence 34689999999999999999999999999877643 23333456779999999999999999888877665432 1111
Q ss_pred EE--e---ccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee-E--EeecCceeEEEecCCCEEEEEEc----C
Q 002591 702 RT--F---MGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT-R--VFKGGTAQMRFQPHLGRYLAAAA----E 769 (903)
Q Consensus 702 ~~--~---~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~-~--~~~~~~~~v~~sp~~~~ll~~s~----d 769 (903)
.. + ....+....+-|-..... | -|+ .|.....+....... . ....+...++|--+|.++++... +
T Consensus 144 ~E~~L~~d~~~~sk~v~VGwGrkeTq-f-rgs-~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~ 220 (1265)
T KOG1920|consen 144 AEKPLDADDERKSKFVNVGWGRKETQ-F-RGS-EGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETG 220 (1265)
T ss_pred hccccccccccccccceeccccccee-e-ecc-hhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCC
Confidence 11 1 011122233444332211 1 222 222222221111110 0 12345667899999888887432 3
Q ss_pred -CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeC
Q 002591 770 -NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP 844 (903)
Q Consensus 770 -g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp 844 (903)
..|++||.+ +..-..-......-.+++|-|.|.++++.-.+ .|.+|.-+..........+......+..++|+.
T Consensus 221 ~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns 299 (1265)
T KOG1920|consen 221 TRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNS 299 (1265)
T ss_pred ceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecC
Confidence 789999987 44333323334455789999999998876432 688888654444444444444455589999999
Q ss_pred CCCEEEEE---ECCCeEEEEECCCCcEE
Q 002591 845 TYPSLLVI---GCYQSLELWNMSENKTM 869 (903)
Q Consensus 845 ~g~~l~t~---s~dg~I~vwdl~~~~~~ 869 (903)
++..|++. .....|++|-+.+....
T Consensus 300 ~sdiLAv~~~~~e~~~v~lwt~~NyhWY 327 (1265)
T KOG1920|consen 300 NSDILAVVTSNLENSLVQLWTTGNYHWY 327 (1265)
T ss_pred CCCceeeeecccccceEEEEEecCeEEE
Confidence 99998883 44446999998876543
No 315
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.49 E-value=8.9e-05 Score=75.65 Aligned_cols=256 Identities=14% Similarity=0.114 Sum_probs=134.6
Q ss_pred CCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEE
Q 002591 634 DGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS 713 (903)
Q Consensus 634 dg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~s 713 (903)
-|++++.|++.|.+++.++++|.....+.....--......+++..|.+|+.|++.+..|.++ ..++...+.......+
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~-~~cVykskcgG~~f~s 140 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKT-YGCVYKSKCGGGTFVS 140 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccc-cceEEecccCCceecc
Confidence 466899999999999999999987777654433223344567889999999999999999998 5566665544333334
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe----ecCc--eeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEec
Q 002591 714 LDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF----KGGT--AQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQ 787 (903)
Q Consensus 714 l~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~----~~~~--~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~ 787 (903)
-+..+....++ .+...|.|.--..+........ .+++ ..++. +..+..+.-||.+.-+| ..|+.+..+.
T Consensus 141 P~i~~g~~sly-~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~splcv---~~sv~i~~VdG~l~~f~-~sG~qvwr~~ 215 (354)
T KOG4649|consen 141 PVIAPGDGSLY-AAITAGAVLAVTKNPYSSTEFWAATRFGPIFASPLCV---GSSVIITTVDGVLTSFD-ESGRQVWRPA 215 (354)
T ss_pred ceecCCCceEE-EEeccceEEEEccCCCCcceehhhhcCCccccCceec---cceEEEEEeccEEEEEc-CCCcEEEeec
Confidence 44555333344 4444566655555544211111 1111 11111 23344555566666666 4555555333
Q ss_pred CCCCCeEE-EEEc-CCCCEEEEEeCC---------eEEEEECCCCCCcceEEEeecCCCceEEEEEeC----CCCEEEEE
Q 002591 788 GHTKPIDS-VCWD-PSGELLASVSED---------SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHP----TYPSLLVI 852 (903)
Q Consensus 788 ~h~~~V~s-l~~s-pdg~~lasgs~d---------~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp----~g~~l~t~ 852 (903)
..++|.. -+-+ |....|+.+.++ .-.+|...++. ..+.... +-..+.++. ..+++..+
T Consensus 216 -t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~---t~~vy~~---p~l~F~~h~~~~S~~~ll~~~ 288 (354)
T KOG4649|consen 216 -TKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQSGT---TLHVYLS---PKLRFDLHSPGISYPKLLRRS 288 (354)
T ss_pred -CCCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecCCc---EEEEEeC---cccceeccCCCCcchhhhhhh
Confidence 2222221 1111 222333333333 34556655541 1111110 001122221 13456778
Q ss_pred ECCCeEEEEECCCCcEEEEccCCCCEEEE---E-----E-ec--CCCEEEEEecCCcEEEcC
Q 002591 853 GCYQSLELWNMSENKTMTLTAHEGLIAAL---A-----V-ST--ETGYVASASHDKFVKLWK 903 (903)
Q Consensus 853 s~dg~I~vwdl~~~~~~~~~~h~~~V~sl---~-----~-sp--dg~~LaSgs~DG~I~IWd 903 (903)
+.||++.|.-.+.. +.....|.+.+-.+ . | +| -+.+|+.|+.|..|+-||
T Consensus 289 s~dgkv~il~~~~s-l~~~~s~~g~lq~~~~~el~~eIFsSPvii~grl~igcRDdYv~cld 349 (354)
T KOG4649|consen 289 SGDGKVMILMTSKS-LAEISSNGGELQNLEAIELSNEIFSSPVIIDGRLLIGCRDDYVRCLD 349 (354)
T ss_pred cCCCcEEEEEeccc-ccccccCCCccceEEEeecCcccccCCeEEccEEEEEEccCeEEEEe
Confidence 88998888744322 12223333322222 1 1 22 124577888999999986
No 316
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.46 E-value=6.9e-05 Score=88.17 Aligned_cols=256 Identities=13% Similarity=0.111 Sum_probs=149.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCCC------CeE--EEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEecc
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSS------LIT--DVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMG 706 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~------~V~--~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~ 706 (903)
+..+++++.++.|+-+|..+++.+-.+..... .+. .+... ++..++.++.++.|+.+|.++ ++.+..+..
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~T-G~~~W~~~~ 138 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAET-GKQVWKFGN 138 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCC-CCEeeeecC
Confidence 34677777889999999999988877654332 010 11111 226788888999999999998 555555443
Q ss_pred CCCc-----eE-EEEecCCCCeEEEEEe---------CCCcEEEEEcCCCeeeEEeecCc--------------------
Q 002591 707 HSAS-----VM-SLDFHPNKDDLICSCD---------GDGEIRYWSINNGSCTRVFKGGT-------------------- 751 (903)
Q Consensus 707 h~~~-----V~-sl~fsp~~~~ll~sgs---------~Dg~I~iwDi~t~~~~~~~~~~~-------------------- 751 (903)
.... |. +..+. +. +++.++ .+|.|..+|..+++.+..++...
T Consensus 139 ~~~~~~~~~i~ssP~v~--~~-~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g 215 (488)
T cd00216 139 NDQVPPGYTMTGAPTIV--KK-LVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGG 215 (488)
T ss_pred CCCcCcceEecCCCEEE--CC-EEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCC
Confidence 2210 11 12222 13 333443 46889999999999877664321
Q ss_pred ----eeEEEecCCCEEEEEEcCC------------------eEEEEECCCCeEEEEecCCCCCeE------EEEEc----
Q 002591 752 ----AQMRFQPHLGRYLAAAAEN------------------VVSILDAETQACRLSLQGHTKPID------SVCWD---- 799 (903)
Q Consensus 752 ----~~v~~sp~~~~ll~~s~dg------------------~I~i~D~~t~~~~~~l~~h~~~V~------sl~~s---- 799 (903)
....+.+.++.+++++.++ .|.-+|.++++.+..+..-...+. ...+.
T Consensus 216 ~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~ 295 (488)
T cd00216 216 GTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKP 295 (488)
T ss_pred CCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccc
Confidence 0233445567888887665 799999999999988653111110 01111
Q ss_pred CCCC---EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEE------------------ECCCe
Q 002591 800 PSGE---LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVI------------------GCYQS 857 (903)
Q Consensus 800 pdg~---~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~------------------s~dg~ 857 (903)
-++. +++.++.+ .+..+|.++++..-..... ...++..| ..++++ ..++.
T Consensus 296 ~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~------~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~ 367 (488)
T cd00216 296 KDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV------EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGG 367 (488)
T ss_pred cCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee------ccccccCC--ceEEEccccccccCcccccCCCCCCCceE
Confidence 1333 56667666 8999999998543222211 01122333 223332 23578
Q ss_pred EEEEECCCCcEEEEccCC---------CCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 858 LELWNMSENKTMTLTAHE---------GLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 858 I~vwdl~~~~~~~~~~h~---------~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
|.-+|+.+++.+...... .+...-.....+.+|+.++.||.|+.+|
T Consensus 368 l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald 422 (488)
T cd00216 368 LAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFD 422 (488)
T ss_pred EEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEE
Confidence 999999999987322211 1111111112456788888899888764
No 317
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.42 E-value=4.9e-05 Score=79.08 Aligned_cols=188 Identities=15% Similarity=0.122 Sum_probs=110.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEecc-------CCCCeEEEEECCCC------CEEEEEeCCCcEEE
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEE-------HSSLITDVRFSPSM------PRLATSSFDKTVRV 691 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~-------h~~~V~~l~fspdg------~~Lasgs~Dg~I~I 691 (903)
.=+-++||||+.+||.+...|+|+|||+.. ..+..+.. -...|..+.|.+.. ..|++-..+|.++-
T Consensus 45 QWRkl~WSpD~tlLa~a~S~G~i~vfdl~g-~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~S 123 (282)
T PF15492_consen 45 QWRKLAWSPDCTLLAYAESTGTIRVFDLMG-SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRS 123 (282)
T ss_pred hheEEEECCCCcEEEEEcCCCeEEEEeccc-ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeee
Confidence 346789999999999999999999999864 33444432 24567778785532 25677778888887
Q ss_pred EeCCC----CCceeEEec---cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEE-
Q 002591 692 WDADN----PGYSLRTFM---GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRY- 763 (903)
Q Consensus 692 WDl~~----~~~~~~~~~---~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~l- 763 (903)
|-+.. +.....+|. .+...|.++.|+|..+-+++.|.....-..+.. ...+..+-++..+..++
T Consensus 124 y~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a--------~~~GLtaWRiL~~~Pyyk 195 (282)
T PF15492_consen 124 YLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKA--------SSCGLTAWRILSDSPYYK 195 (282)
T ss_pred EEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccc--------cccCceEEEEcCCCCcEE
Confidence 77532 122223322 346789999999987766655544332111100 01111111111111111
Q ss_pred -EEEEcCC------eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 002591 764 -LAAAAEN------VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 764 -l~~s~dg------~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~ 821 (903)
+....|+ +..+|.+-+.+...........|..+..+|||.+||+...+ .|.+|++-+.
T Consensus 196 ~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL 261 (282)
T PF15492_consen 196 QVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSL 261 (282)
T ss_pred EccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcc
Confidence 1111111 11233333222222223356789999999999999999888 9999999764
No 318
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.41 E-value=5.5e-06 Score=96.75 Aligned_cols=183 Identities=13% Similarity=0.131 Sum_probs=135.7
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeE-
Q 002591 676 SMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQM- 754 (903)
Q Consensus 676 dg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v- 754 (903)
++..++.|+.-..+..+|+++ .+..+...-....|+-++.. ++++++|...|+|.+-|.++.+.++++..+...+
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~-~~e~r~~~v~a~~v~imR~N---nr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siS 221 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNT-EKETRTTNVSASGVTIMRYN---NRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSIS 221 (1118)
T ss_pred CCcceeecchhhheeeeeccc-ceeeeeeeccCCceEEEEec---CcEEEeecccceEEeecCCcCceeeeeecccccee
Confidence 455788888888899999987 45555554444457767664 3467799999999999999999999999887665
Q ss_pred EEecCCCEEEEEEc---------CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCC--EEEEEeCCeEEEEECCCCCC
Q 002591 755 RFQPHLGRYLAAAA---------ENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGE--LLASVSEDSVRVWTVGSGSE 823 (903)
Q Consensus 755 ~~sp~~~~ll~~s~---------dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~--~lasgs~d~I~iwdl~s~~~ 823 (903)
.|+-.|+.+++++. |.-|+|||++..+.+..+.-+.++ .-+.|+|.-. ++++.+.+...+.|..+...
T Consensus 222 DfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsN 300 (1118)
T KOG1275|consen 222 DFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSN 300 (1118)
T ss_pred eeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeeccccccCC
Confidence 48888999999876 557899999998877666655554 4567888543 44444455778888433322
Q ss_pred -cceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEEC
Q 002591 824 -GECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNM 863 (903)
Q Consensus 824 -~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl 863 (903)
...+.-+......+..+.+++++..++.+..+|.|.+|.-
T Consensus 301 P~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 301 PPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred CccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 2344444555667999999999999999999999999973
No 319
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.41 E-value=0.0002 Score=78.97 Aligned_cols=268 Identities=14% Similarity=0.106 Sum_probs=135.8
Q ss_pred EEEcCCCCEEEEEe-CCC--cEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEec
Q 002591 629 CHFSSDGKLLATGG-HDK--KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFM 705 (903)
Q Consensus 629 l~fspdg~~Latgs-~Dg--~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~ 705 (903)
=+|..||+.|+.++ .|| .+.+.|+++++...-..+.........++++.+.|+.......|+-.|+++ .+....+.
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T-~e~~~vy~ 119 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDT-LEERVVYE 119 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT---EEEEEE
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCc-CcEEEEEE
Confidence 46778997665554 455 466678888765554443323333566778888887766667899999998 44445555
Q ss_pred cCCCceEEEEecCC-CCeEEEEEe----------------------CCCcEEEEEcCCCeeeEEeecC--ceeEEEecCC
Q 002591 706 GHSASVMSLDFHPN-KDDLICSCD----------------------GDGEIRYWSINNGSCTRVFKGG--TAQMRFQPHL 760 (903)
Q Consensus 706 ~h~~~V~sl~fsp~-~~~ll~sgs----------------------~Dg~I~iwDi~t~~~~~~~~~~--~~~v~~sp~~ 760 (903)
.....+-...|..+ +...++.+- -...|...|+.+++....+... ...+.++|..
T Consensus 120 ~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 120 VPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTD 199 (386)
T ss_dssp --TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTE
T ss_pred CCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCC
Confidence 55555555666422 222332211 1234667788888877776654 4778999999
Q ss_pred CEEEEEEcCC-----eEEEEECCC-CeEEEEecCCCC--CeEEEEEcCCCCEEEEEe-----CC-eEEEEECCCCCCcce
Q 002591 761 GRYLAAAAEN-----VVSILDAET-QACRLSLQGHTK--PIDSVCWDPSGELLASVS-----ED-SVRVWTVGSGSEGEC 826 (903)
Q Consensus 761 ~~ll~~s~dg-----~I~i~D~~t-~~~~~~l~~h~~--~V~sl~~spdg~~lasgs-----~d-~I~iwdl~s~~~~~~ 826 (903)
..+++-|.+| .-+||-+++ +.....+..+.. .+..=-|.+||..|.--+ .+ .|.-+|+.+++.. .
T Consensus 200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~-~ 278 (386)
T PF14583_consen 200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERR-R 278 (386)
T ss_dssp EEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EE-E
T ss_pred CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCce-E
Confidence 8888877654 225554332 233333333322 233446899998554422 23 5777888776432 2
Q ss_pred EEEeecCCCceEEEEEeCCCCEEEEEECCC----------------eEEEEECCCCcEEEEccCCC-----------CEE
Q 002591 827 VHELSCNGNKFHSCVFHPTYPSLLVIGCYQ----------------SLELWNMSENKTMTLTAHEG-----------LIA 879 (903)
Q Consensus 827 i~~~~~~~~~i~si~~sp~g~~l~t~s~dg----------------~I~vwdl~~~~~~~~~~h~~-----------~V~ 879 (903)
+... .....+-.+++++.++-=+.|. -|+++++..++...+..|.. .=.
T Consensus 279 ~~~~----p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hP 354 (386)
T PF14583_consen 279 LMEM----PWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHP 354 (386)
T ss_dssp EEEE-----SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSSTT--
T ss_pred EEeC----CceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCC
Confidence 2221 1344555677887655444431 57788998877664444432 124
Q ss_pred EEEEecCCCEEEEEe-cCCcEEEc
Q 002591 880 ALAVSTETGYVASAS-HDKFVKLW 902 (903)
Q Consensus 880 sl~~spdg~~LaSgs-~DG~I~IW 902 (903)
...|+||+++|+..| ..|...||
T Consensus 355 hp~FSPDgk~VlF~Sd~~G~~~vY 378 (386)
T PF14583_consen 355 HPSFSPDGKWVLFRSDMEGPPAVY 378 (386)
T ss_dssp --EE-TTSSEEEEEE-TTSS-EEE
T ss_pred CCccCCCCCEEEEECCCCCCccEE
Confidence 579999999866544 57776665
No 320
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.38 E-value=5.7e-05 Score=87.75 Aligned_cols=255 Identities=14% Similarity=0.092 Sum_probs=147.6
Q ss_pred CCCCEEEEEeC-CCcEEEEECCCCceeEEecc-CCCCeEEEEEC--CCCCEEEEEe------------------CCCcEE
Q 002591 633 SDGKLLATGGH-DKKAVLWHTDTLKSKTNLEE-HSSLITDVRFS--PSMPRLATSS------------------FDKTVR 690 (903)
Q Consensus 633 pdg~~Latgs~-Dg~V~vWd~~t~~~~~~l~~-h~~~V~~l~fs--pdg~~Lasgs------------------~Dg~I~ 690 (903)
.||++|+.-.. +..|...+++..++.+.++. ....+..++|- |+..|+++++ ..+.+.
T Consensus 139 ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~l~~~~ey~~~vS 218 (635)
T PRK02888 139 YDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKDLDDPKKYRSLFT 218 (635)
T ss_pred cceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCEeecccceeEEEE
Confidence 47888888664 55677777776655544432 22233333332 3333333332 244556
Q ss_pred EEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEe---CCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEE
Q 002591 691 VWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD---GDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAA 767 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs---~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s 767 (903)
+.|.++ .+....+.- ......+.+++++.++++++. ...++...+......+..|.-.. ...+.+++++..+
T Consensus 219 vID~et-meV~~qV~V-dgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~-iea~vkdGK~~~V-- 293 (635)
T PRK02888 219 AVDAET-MEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIAR-IEEAVKAGKFKTI-- 293 (635)
T ss_pred EEECcc-ceEEEEEEe-CCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHH-HHHhhhCCCEEEE--
Confidence 666665 233333321 223455788888887776652 22344444444333333332111 1134456665554
Q ss_pred cCCeEEEEECCC-----CeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCC---------cceEEEee
Q 002591 768 AENVVSILDAET-----QACRLSLQGHTKPIDSVCWDPSGELLASVSED--SVRVWTVGSGSE---------GECVHELS 831 (903)
Q Consensus 768 ~dg~I~i~D~~t-----~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~---------~~~i~~~~ 831 (903)
.++.|.++|.++ .+.+..+. -....+.|.++|||+++++++.- +|.|+|+.+... ...+.+..
T Consensus 294 ~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaeve 372 (635)
T PRK02888 294 GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPE 372 (635)
T ss_pred CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeec
Confidence 467899999998 34555444 44567889999999988877764 999999987532 11223333
Q ss_pred cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC----------CcEE-EEccCCCCE-----EEEEEecCCCEEEEEe
Q 002591 832 CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSE----------NKTM-TLTAHEGLI-----AALAVSTETGYVASAS 894 (903)
Q Consensus 832 ~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~----------~~~~-~~~~h~~~V-----~sl~~spdg~~LaSgs 894 (903)
. +......+|.++|..+.+..-|..|..||+.. ..++ .+.-|-.+. .+=.-.+||+||++..
T Consensus 373 v-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 373 L-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSLN 450 (635)
T ss_pred c-CCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEcc
Confidence 3 33445668999998888888899999999876 2233 233332221 1122357888888764
No 321
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.38 E-value=1.1e-06 Score=64.58 Aligned_cols=39 Identities=28% Similarity=0.485 Sum_probs=36.9
Q ss_pred eeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 002591 613 FKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWH 651 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd 651 (903)
++++.++++|.+.|++|+|+|++.+|++|+.|++|+|||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367889999999999999999999999999999999997
No 322
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.36 E-value=6.9e-05 Score=87.62 Aligned_cols=203 Identities=14% Similarity=0.249 Sum_probs=138.9
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCC-----cEEEEEcCCC-----
Q 002591 672 RFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDG-----EIRYWSINNG----- 741 (903)
Q Consensus 672 ~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg-----~I~iwDi~t~----- 741 (903)
+|++.+..+|.|+.+|.|.+++-. -..++.|..+...|...-|.-++..+|++.+.|+ .|+|||++..
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s--~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSS--FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred EEcCCCceEEEeeccccEEEeccc--ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 356788899999999988887643 3445777777777444555666656776766664 4899998643
Q ss_pred -eee---EEee-------cCceeEEEecCCCEEEEEEcCCeEEEEECC--C--CeEEEEecCCCCCeEEEEEcCCCCE-E
Q 002591 742 -SCT---RVFK-------GGTAQMRFQPHLGRYLAAAAENVVSILDAE--T--QACRLSLQGHTKPIDSVCWDPSGEL-L 805 (903)
Q Consensus 742 -~~~---~~~~-------~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~--t--~~~~~~l~~h~~~V~sl~~spdg~~-l 805 (903)
.|+ +.+. .+...++++.+-..+++|-.+|.|..+.-+ . +...........+|+.+++..++.. +
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~l 187 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVL 187 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeE
Confidence 344 2222 135668888888999999999999998432 1 2222222235678999999999985 5
Q ss_pred EEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEc-cCCCCEE
Q 002591 806 ASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLT-AHEGLIA 879 (903)
Q Consensus 806 asgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~-~h~~~V~ 879 (903)
++++...|.+|.+... . .....+..++..+.|..+++....|++++ +..|++||....... .+. +|.....
T Consensus 188 Fv~Tt~~V~~y~l~gr-~-p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l~fY~sd~~~~cfaf~~g~kk~~~ 260 (933)
T KOG2114|consen 188 FVATTEQVMLYSLSGR-T-PSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFLYFYDSDGRGPCFAFEVGEKKEML 260 (933)
T ss_pred EEEecceeEEEEecCC-C-cceeeeccCCccceeeecCCCCccEEEec-CceEEEEcCCCcceeeeecCCCeEEEE
Confidence 6666668999999833 2 34555777888888888887666455544 457999998765543 555 5554443
No 323
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.32 E-value=1.5e-05 Score=92.47 Aligned_cols=180 Identities=18% Similarity=0.238 Sum_probs=127.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
.+.|+|++++ +++|+.|+.+|.|++++... .. .+...|+.. ..+|.++++|+.||+|.|..+.++. ...
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~-~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~-~~~ 107 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQG-NP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDD-EIT 107 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCC-cc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCc-cce
Confidence 5678888887 55999999999999999763 33 444445443 5679999999999999999998743 333
Q ss_pred EeccCCCceEEEEecCC----CCeEEEEEeCCCcEEEEEcCCC---e--eeEEeecCceeEEEecCCCEEEEEEcCCeEE
Q 002591 703 TFMGHSASVMSLDFHPN----KDDLICSCDGDGEIRYWSINNG---S--CTRVFKGGTAQMRFQPHLGRYLAAAAENVVS 773 (903)
Q Consensus 703 ~~~~h~~~V~sl~fsp~----~~~ll~sgs~Dg~I~iwDi~t~---~--~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~ 773 (903)
.+. ...++.+|+++|+ ....+++|+..| +.++.-+-. . ....-++.+.+++|. +.+++-..|-.|+
T Consensus 108 ~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~---g~lIAWand~Gv~ 182 (846)
T KOG2066|consen 108 QYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR---GNLIAWANDDGVK 182 (846)
T ss_pred eEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec---CcEEEEecCCCcE
Confidence 333 4567999999998 222455888888 777654311 1 123334566667665 5577888888899
Q ss_pred EEECCCCeEEEEecCCCCCe------EEEEEcCCCCEEEEEeCCeEEEEECC
Q 002591 774 ILDAETQACRLSLQGHTKPI------DSVCWDPSGELLASVSEDSVRVWTVG 819 (903)
Q Consensus 774 i~D~~t~~~~~~l~~h~~~V------~sl~~spdg~~lasgs~d~I~iwdl~ 819 (903)
+||+.+...+..+......+ ..+.|.+ ...|+.|-.|+|+|..++
T Consensus 183 vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~-~~~LVIGW~d~v~i~~I~ 233 (846)
T KOG2066|consen 183 VYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQD-EDRLVIGWGDSVKICSIK 233 (846)
T ss_pred EEeccccceeeccCCCCCCCCcccCCCceEecC-CCeEEEecCCeEEEEEEe
Confidence 99999988877665433332 3467776 455667777789998887
No 324
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.28 E-value=0.00022 Score=83.53 Aligned_cols=192 Identities=12% Similarity=0.158 Sum_probs=130.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCC-CEEEEEeCCCc-----EEEEeCCCC-
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSM-PRLATSSFDKT-----VRVWDADNP- 697 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg-~~Lasgs~Dg~-----I~IWDl~~~- 697 (903)
.|.| |++.+..+|.|+.+|.|.+++ ...+.++.+..+...|...-|.-++ .+|++.+.|+. |+|||++.-
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 4554 567788999999999998887 3445567788877773333344444 67888777654 899999742
Q ss_pred ----Ccee---EEec----cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC--CCe-----eeEEeecCceeEEEecC
Q 002591 698 ----GYSL---RTFM----GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN--NGS-----CTRVFKGGTAQMRFQPH 759 (903)
Q Consensus 698 ----~~~~---~~~~----~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~--t~~-----~~~~~~~~~~~v~~sp~ 759 (903)
..++ +.+. ....++.+++.+.+ -..+|+|-.+|.|.++.-. ..+ ....-+.+++.+.+..+
T Consensus 104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~-l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d 182 (933)
T KOG2114|consen 104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSED-LKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD 182 (933)
T ss_pred CCCCcceeeeeeeeccCCCCCCCcceEEEEEcc-ccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence 1233 2222 13567888888887 4466788889999988422 111 11122457888889888
Q ss_pred CCEEEEEEcCCeEEEEECCCCeE-EEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCC
Q 002591 760 LGRYLAAAAENVVSILDAETQAC-RLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGS 820 (903)
Q Consensus 760 ~~~ll~~s~dg~I~i~D~~t~~~-~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s 820 (903)
+..++.+.....|.+|.+....+ ...+..|...+.|..|++...-|++++...|.+||...
T Consensus 183 ~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~e~l~fY~sd~ 244 (933)
T KOG2114|consen 183 GKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGSEFLYFYDSDG 244 (933)
T ss_pred CceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecCceEEEEcCCC
Confidence 87756666667788888874442 44467788899999999865557777777899999863
No 325
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.27 E-value=0.0011 Score=76.45 Aligned_cols=239 Identities=15% Similarity=0.130 Sum_probs=135.7
Q ss_pred eEEEEEcCCCCEEEEE-eCCC----cEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCC-----------cE
Q 002591 626 VICCHFSSDGKLLATG-GHDK----KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDK-----------TV 689 (903)
Q Consensus 626 V~~l~fspdg~~Latg-s~Dg----~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg-----------~I 689 (903)
+..++++|||++||.+ +..| .|+|+|+++++.+...-... ....+.|.++++.|+....+. .|
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 4467899999988865 3333 59999999997765432211 122399999998877665433 37
Q ss_pred EEEeCCCCCce-eEEeccCCCc--eEEEEecCCCCeEEEEEeCC---CcEEEEEcCCC-----eeeEEeec--CceeEEE
Q 002591 690 RVWDADNPGYS-LRTFMGHSAS--VMSLDFHPNKDDLICSCDGD---GEIRYWSINNG-----SCTRVFKG--GTAQMRF 756 (903)
Q Consensus 690 ~IWDl~~~~~~-~~~~~~h~~~--V~sl~fsp~~~~ll~sgs~D---g~I~iwDi~t~-----~~~~~~~~--~~~~v~~ 756 (903)
++|.+.+.... ...+...... ...+..++++.++++..... ..|++.|+..+ ........ ......-
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~ 284 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVD 284 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEE
Confidence 88888774333 3344433322 56788999999887766544 35888888875 23333322 2222222
Q ss_pred ecCCCEEEEEEc----CCeEEEEECCCCe---EEEEecCCCCC--eEEEEEcCCCC-EEEEEeCC---eEEEEECCCCCC
Q 002591 757 QPHLGRYLAAAA----ENVVSILDAETQA---CRLSLQGHTKP--IDSVCWDPSGE-LLASVSED---SVRVWTVGSGSE 823 (903)
Q Consensus 757 sp~~~~ll~~s~----dg~I~i~D~~t~~---~~~~l~~h~~~--V~sl~~spdg~-~lasgs~d---~I~iwdl~s~~~ 823 (903)
.. ++.++..+. .+.|...++.... ....+..+... +..+.. .+. +++....+ .|++|++..+
T Consensus 285 ~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~~~-- 359 (414)
T PF02897_consen 285 HH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLDDG-- 359 (414)
T ss_dssp EE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT-T--
T ss_pred cc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEEECCCC--
Confidence 22 554444433 3578888888765 23344555553 444444 344 44444444 7999999822
Q ss_pred cceEEEeec-CCCceEEEEEeCCCCEEEEEECC----CeEEEEECCCCcEEEE
Q 002591 824 GECVHELSC-NGNKFHSCVFHPTYPSLLVIGCY----QSLELWNMSENKTMTL 871 (903)
Q Consensus 824 ~~~i~~~~~-~~~~i~si~~sp~g~~l~t~s~d----g~I~vwdl~~~~~~~~ 871 (903)
.....+.. ..+.|..+...++.+.+...-.. .+|+.||+.+++...+
T Consensus 360 -~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~~~ 411 (414)
T PF02897_consen 360 -KESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELTLL 411 (414)
T ss_dssp -EEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEEEE
T ss_pred -cEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEEEE
Confidence 22222222 23345555555666554443322 4899999999887643
No 326
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.24 E-value=0.00013 Score=83.80 Aligned_cols=118 Identities=16% Similarity=0.144 Sum_probs=88.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEE-eccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTN-LEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS 700 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~-l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~ 700 (903)
|...|.--+++..+++|+.|+.-|.|++|+-..+..... ..+....+..+..+++..++|.|+..|.|.|+-+......
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 444566666777888999999999999999665543332 3335555667777888888999999999999988763221
Q ss_pred e----EE-eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC
Q 002591 701 L----RT-FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN 740 (903)
Q Consensus 701 ~----~~-~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t 740 (903)
. .. -..|...|++++|++++..++ +|+..|.|.+-.+.+
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~y-sGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLY-SGDSQGKVVLTELDS 155 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEe-ecCCCceEEEEEech
Confidence 1 11 123788999999999988765 999999999988876
No 327
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.24 E-value=0.00025 Score=75.97 Aligned_cols=192 Identities=14% Similarity=0.164 Sum_probs=136.5
Q ss_pred CceEEEEecCCCCeEEEEEeCCCc-EEEEEcCCCeeeEEeecCc-----eeEEEecCCCEEEEEEc-----CCeEEEEEC
Q 002591 709 ASVMSLDFHPNKDDLICSCDGDGE-IRYWSINNGSCTRVFKGGT-----AQMRFQPHLGRYLAAAA-----ENVVSILDA 777 (903)
Q Consensus 709 ~~V~sl~fsp~~~~ll~sgs~Dg~-I~iwDi~t~~~~~~~~~~~-----~~v~~sp~~~~ll~~s~-----dg~I~i~D~ 777 (903)
.....++.+|.....++.+-.-|+ ..+||..+++....+.... ..-+|++++.+|++.-. .|.|-|||.
T Consensus 5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~ 84 (305)
T PF07433_consen 5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDA 84 (305)
T ss_pred ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEEC
Confidence 345568889977778878877665 6789999999887665432 24679999999998755 479999999
Q ss_pred C-CCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-------------------eEEEEECCCCCCcceEEE--e--ecC
Q 002591 778 E-TQACRLSLQGHTKPIDSVCWDPSGELLASVSED-------------------SVRVWTVGSGSEGECVHE--L--SCN 833 (903)
Q Consensus 778 ~-t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-------------------~I~iwdl~s~~~~~~i~~--~--~~~ 833 (903)
. +.+.+.++..|.-.-..+.+.|||+.|+++..+ ++.+.|..++ ..+.. + ..|
T Consensus 85 ~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG---~ll~q~~Lp~~~~ 161 (305)
T PF07433_consen 85 ARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSG---ALLEQVELPPDLH 161 (305)
T ss_pred cCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCC---ceeeeeecCcccc
Confidence 9 668888898887777889999999877766422 3555556655 33333 3 336
Q ss_pred CCceEEEEEeCCCCEEEEEECCC-------eEEEEECCCCc-EEE-----EccCCCCEEEEEEecCCCEEEEEe-cCCcE
Q 002591 834 GNKFHSCVFHPTYPSLLVIGCYQ-------SLELWNMSENK-TMT-----LTAHEGLIAALAVSTETGYVASAS-HDKFV 899 (903)
Q Consensus 834 ~~~i~si~~sp~g~~l~t~s~dg-------~I~vwdl~~~~-~~~-----~~~h~~~V~sl~~spdg~~LaSgs-~DG~I 899 (903)
...|..+++.++|..++..-..+ -|.+++....- .+. ...-.+.|-+|+++.++.+|++.| .-+++
T Consensus 162 ~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~ 241 (305)
T PF07433_consen 162 QLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRV 241 (305)
T ss_pred ccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEE
Confidence 67899999999998766665544 34555544321 111 123457899999999998775554 57788
Q ss_pred EEcC
Q 002591 900 KLWK 903 (903)
Q Consensus 900 ~IWd 903 (903)
.+||
T Consensus 242 ~~~d 245 (305)
T PF07433_consen 242 AVWD 245 (305)
T ss_pred EEEE
Confidence 8985
No 328
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=98.23 E-value=7.9e-07 Score=100.12 Aligned_cols=198 Identities=15% Similarity=0.204 Sum_probs=132.9
Q ss_pred CCCCeEEEEEcCCC--CEEEEEeCCCcEEEEECCCC--ceeEEeccCCCCeEEEEECCC-CCEEEEEe----CCCcEEEE
Q 002591 622 STSKVICCHFSSDG--KLLATGGHDKKAVLWHTDTL--KSKTNLEEHSSLITDVRFSPS-MPRLATSS----FDKTVRVW 692 (903)
Q Consensus 622 H~~~V~~l~fspdg--~~Latgs~Dg~V~vWd~~t~--~~~~~l~~h~~~V~~l~fspd-g~~Lasgs----~Dg~I~IW 692 (903)
....+.|+++..+. ..+++|..+|.|.+-.+... .......+|...+++++|++- ...||+|- .|..+.||
T Consensus 55 dtqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 55 DTQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred cCCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 45568888876644 47889999999999887632 224556678899999999885 44566662 36679999
Q ss_pred eCCCCC-ce--eEEec-cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC-eeeEEeec-CceeEEEecCCCEEEEE
Q 002591 693 DADNPG-YS--LRTFM-GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG-SCTRVFKG-GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 693 Dl~~~~-~~--~~~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~-~~~~~~~~-~~~~v~~sp~~~~ll~~ 766 (903)
|+.+.- .+ ...|. +......++||..+. .++.+|.....|.++|++.. .....+.. -+..+.+.|.....++.
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~-klvlaGm~sr~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs 213 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDT-KLVLAGMTSRSVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCS 213 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCc-chhhcccccchhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceec
Confidence 998631 11 11122 234456689998664 46668888889999999833 22222222 34557788876667777
Q ss_pred EcCCeEEEEE-CCCCeE-EEEecCC----CCCeEEEEEcCCCC-EEEEEeCC--eEEEEECCC
Q 002591 767 AAENVVSILD-AETQAC-RLSLQGH----TKPIDSVCWDPSGE-LLASVSED--SVRVWTVGS 820 (903)
Q Consensus 767 s~dg~I~i~D-~~t~~~-~~~l~~h----~~~V~sl~~spdg~-~lasgs~d--~I~iwdl~s 820 (903)
..|+.|.+|| .++-+. +..+... ...+..++|+|... ++++...| +|++||+..
T Consensus 214 ~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 214 NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 7799999999 333322 2222211 22489999999766 77777777 899999864
No 329
>PF08513 LisH: LisH; InterPro: IPR013720 The LisH motif is found in a large number of eukaryotic proteins, from metazoa, fungi and plants that have a wide range of functions. The recently solved structure of the LisH domain in the N-terminal region of LIS1 depicted it as a novel dimerization motif, and that other structural elements are likely to play an important role in dimerisation [, , ]. The LisH (lis homology) domain mediates protein dimerisation and tetramerisation. The LisH domain is found in Sif2, a component of the Set3 complex which is responsible for repressing meiotic genes. It has been shown that the LisH domain helps mediate interaction with components of the Set3 complex []. ; PDB: 2XTE_L 2XTC_B 2XTD_A 1UUJ_B.
Probab=98.22 E-value=1.4e-06 Score=58.14 Aligned_cols=27 Identities=41% Similarity=0.602 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcC
Q 002591 10 KMLDVYIHDYLVKRDLKASAQAFQAEG 36 (903)
Q Consensus 10 ~~l~~yiydyl~~~~~~~~a~a~~~e~ 36 (903)
+.||.+|||||+++|+.++|++|.+|+
T Consensus 1 ~~Ln~lI~~YL~~~Gy~~tA~~f~~Ea 27 (27)
T PF08513_consen 1 EELNQLIYDYLVENGYKETAKAFAKEA 27 (27)
T ss_dssp HHHHHHHHHHHHHCT-HHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCcHHHHHHHHhcC
Confidence 579999999999999999999999885
No 330
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.21 E-value=0.0014 Score=74.65 Aligned_cols=90 Identities=11% Similarity=0.082 Sum_probs=70.9
Q ss_pred eEEEEECCCCCCcceEEEe-ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEE
Q 002591 812 SVRVWTVGSGSEGECVHEL-SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYV 890 (903)
Q Consensus 812 ~I~iwdl~s~~~~~~i~~~-~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~L 890 (903)
..++|++...+ ..++... ......+.+++++|+...++.|+.||+|.+||...+.... ....-.++.++|+|+|.+|
T Consensus 237 d~ciYE~~r~k-lqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~-~ka~~~P~~iaWHp~gai~ 314 (545)
T PF11768_consen 237 DSCIYECSRNK-LQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL-AKAEFIPTLIAWHPDGAIF 314 (545)
T ss_pred EEEEEEeecCc-eeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee-eeecccceEEEEcCCCcEE
Confidence 35677776443 2333222 2346789999999999999999999999999998775443 3455678999999999999
Q ss_pred EEEecCCcEEEcC
Q 002591 891 ASASHDKFVKLWK 903 (903)
Q Consensus 891 aSgs~DG~I~IWd 903 (903)
++|+.-|.|.+||
T Consensus 315 ~V~s~qGelQ~FD 327 (545)
T PF11768_consen 315 VVGSEQGELQCFD 327 (545)
T ss_pred EEEcCCceEEEEE
Confidence 9999999999997
No 331
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.21 E-value=2.9e-06 Score=62.34 Aligned_cols=39 Identities=41% Similarity=0.557 Sum_probs=36.9
Q ss_pred CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 002591 655 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 655 ~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWD 693 (903)
++++.++.+|...|++|+|+|++.+|++++.|+.|+|||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367889999999999999999999999999999999997
No 332
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.20 E-value=3.6e-06 Score=88.64 Aligned_cols=159 Identities=12% Similarity=0.139 Sum_probs=118.8
Q ss_pred EEEeCCCcEEEEEcCCCeeeE-EeecCceeEEEecCCCEEEEEEcCCeEEEEECCCC-----eEEEEecCCCCCeEEEEE
Q 002591 725 CSCDGDGEIRYWSINNGSCTR-VFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQ-----ACRLSLQGHTKPIDSVCW 798 (903)
Q Consensus 725 ~sgs~Dg~I~iwDi~t~~~~~-~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~-----~~~~~l~~h~~~V~sl~~ 798 (903)
++.+.+-.|-+-|++++.--. .-+..+....|.-.++.++.|+..|.|..+|++.. .+...+. |.+.|+++..
T Consensus 228 fs~G~sqqv~L~nvetg~~qsf~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvtslq~ 306 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQSFQSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVTSLQI 306 (425)
T ss_pred ecccccceeEEEEeecccccccccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchhhhhh
Confidence 456667889999999875322 13456667778888899999999999999999975 3444444 8999999887
Q ss_pred cC-CCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEE--EEEeCCCCEEEEEECCCeEEEEECCCCcEEEEcc-
Q 002591 799 DP-SGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHS--CVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTA- 873 (903)
Q Consensus 799 sp-dg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~s--i~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~- 873 (903)
-. ++.+|++.+.+ +|++||++.-+..+.+....+|-+.-.- +..++....|++++.|...+||.++.+.++....
T Consensus 307 Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 307 LQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPF 386 (425)
T ss_pred hccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCC
Confidence 76 67777777777 9999999987555558888887655433 3456677889999999999999999999883322
Q ss_pred ----CCCCEEEEEEe
Q 002591 874 ----HEGLIAALAVS 884 (903)
Q Consensus 874 ----h~~~V~sl~~s 884 (903)
.+..+.+++|.
T Consensus 387 ~~s~~e~d~~sv~~~ 401 (425)
T KOG2695|consen 387 PYSASEVDIPSVAFD 401 (425)
T ss_pred CCccccccccceehh
Confidence 33355566664
No 333
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.19 E-value=8.3e-05 Score=86.46 Aligned_cols=183 Identities=16% Similarity=0.222 Sum_probs=125.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeee
Q 002591 665 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCT 744 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~ 744 (903)
.+.++|++++ ++.|+.|..+|.|++++... .. ++...|... ..+|. ++++|+.||+|.|..+-+.+..
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~--~~-~~~~~~s~~------~~~Ge-y~asCS~DGkv~I~sl~~~~~~ 106 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQG--NP-KTNFDHSSS------ILEGE-YVASCSDDGKVVIGSLFTDDEI 106 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecCC--cc-ccccccccc------ccCCc-eEEEecCCCcEEEeeccCCccc
Confidence 3456677765 56899999999999999874 33 444445544 33444 6679999999999988877644
Q ss_pred --EEeecCceeEEEecC-----CCEEEEEEcCCeEEEEECCCC--eEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEE
Q 002591 745 --RVFKGGTAQMRFQPH-----LGRYLAAAAENVVSILDAETQ--ACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRV 815 (903)
Q Consensus 745 --~~~~~~~~~v~~sp~-----~~~ll~~s~dg~I~i~D~~t~--~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~i 815 (903)
..|+.....++++|+ .+.+++|+.-| +.++.-+-. +.-..+....++|.+|+|. |++||-+++..|+|
T Consensus 107 ~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~Gv~v 183 (846)
T KOG2066|consen 107 TQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDGVKV 183 (846)
T ss_pred eeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCCcEE
Confidence 466778999999998 36788888888 777654322 1112345567899999998 89999999889999
Q ss_pred EECCCCCCcceEEEeec---CCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 816 WTVGSGSEGECVHELSC---NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 816 wdl~s~~~~~~i~~~~~---~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
||+.+......+..-.. .+.....+.|.++.+ |+. |...+|+|..++
T Consensus 184 yd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVI-GW~d~v~i~~I~ 233 (846)
T KOG2066|consen 184 YDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVI-GWGDSVKICSIK 233 (846)
T ss_pred EeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEE-ecCCeEEEEEEe
Confidence 99987633222211110 112234556766543 444 555578888777
No 334
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.17 E-value=0.0021 Score=73.10 Aligned_cols=252 Identities=15% Similarity=0.132 Sum_probs=166.3
Q ss_pred EEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEE
Q 002591 647 AVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF-DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLIC 725 (903)
Q Consensus 647 V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~-Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~ 725 (903)
+.+++..+......+..+. ....+.+.+++..++.... ...+.+.+... .............-..+++++.+..+++
T Consensus 13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~-n~~~~~~~~g~~~p~~i~v~~~~~~vyv 90 (381)
T COG3391 13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATS-NTVTQSLSVGGVYPAGVAVNPAGNKVYV 90 (381)
T ss_pred eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeeccccc-ceeeeeccCCCccccceeeCCCCCeEEE
Confidence 6666655555544444333 5667788888865544432 22444444441 2111111111133456888888888887
Q ss_pred EEeCCCcEEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEc---CCeEEEEECCCCeEEEEecCCCCCeEEEEEcC
Q 002591 726 SCDGDGEIRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAA---ENVVSILDAETQACRLSLQGHTKPIDSVCWDP 800 (903)
Q Consensus 726 sgs~Dg~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~---dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~sp 800 (903)
+...++.|.+.|..+.++...... ....+.++++++.++++.. ++.+.++|..+.+.+.+...-..+ ..++++|
T Consensus 91 ~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p 169 (381)
T COG3391 91 TTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDP 169 (381)
T ss_pred ecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECC
Confidence 888789999999888877766543 4567899999988888776 689999999999888886554445 8899999
Q ss_pred CCCEEEEEeC-C-eEEEEECCCCCCcc-eEEEeecCCCceEEEEEeCCCCEEEEEECC---CeEEEEECCCCcEEEEc-c
Q 002591 801 SGELLASVSE-D-SVRVWTVGSGSEGE-CVHELSCNGNKFHSCVFHPTYPSLLVIGCY---QSLELWNMSENKTMTLT-A 873 (903)
Q Consensus 801 dg~~lasgs~-d-~I~iwdl~s~~~~~-~i~~~~~~~~~i~si~~sp~g~~l~t~s~d---g~I~vwdl~~~~~~~~~-~ 873 (903)
+|..++.... + .|.++|........ .......-......+.+.+++.++++.... +.+.+.|..++...... .
T Consensus 170 ~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~ 249 (381)
T COG3391 170 DGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLP 249 (381)
T ss_pred CCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccc
Confidence 9996666663 3 89999976542211 000011223445677899999987776655 49999999998887442 1
Q ss_pred CCC-CEEEEEEecCCCEEEEEecC-CcEEE
Q 002591 874 HEG-LIAALAVSTETGYVASASHD-KFVKL 901 (903)
Q Consensus 874 h~~-~V~sl~~spdg~~LaSgs~D-G~I~I 901 (903)
-.. ....+.++|+|+++.+.... +.|.+
T Consensus 250 ~~~~~~~~v~~~p~g~~~yv~~~~~~~V~v 279 (381)
T COG3391 250 VGSGAPRGVAVDPAGKAAYVANSQGGTVSV 279 (381)
T ss_pred cccCCCCceeECCCCCEEEEEecCCCeEEE
Confidence 112 56778889999988777433 44443
No 335
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.15 E-value=0.00023 Score=81.46 Aligned_cols=191 Identities=13% Similarity=0.233 Sum_probs=124.7
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEeCC---CcEEEEEcCCCeeeE--EeecCceeEEEecCCCEEEEEEc-CC-
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD---GEIRYWSINNGSCTR--VFKGGTAQMRFQPHLGRYLAAAA-EN- 770 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D---g~I~iwDi~t~~~~~--~~~~~~~~v~~sp~~~~ll~~s~-dg- 770 (903)
+.....+..-...+..-+|+|++..+.+..-.. ..++++|+++++... .+.+......|+|++.+++.+.. |+
T Consensus 182 g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~ 261 (425)
T COG0823 182 GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGS 261 (425)
T ss_pred CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCC
Confidence 444555555666777889999988766553333 359999999887544 45567777899999988877765 44
Q ss_pred -eEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 771 -VVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 771 -~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
.|+++|+....... +....+.-+.-.|+|||++|+..++. .|.++++..... ..+......-..-.|+|+
T Consensus 262 ~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~----~riT~~~~~~~~p~~Spd 336 (425)
T COG0823 262 PDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV----TRLTFSGGGNSNPVWSPD 336 (425)
T ss_pred ccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce----eEeeccCCCCcCccCCCC
Confidence 67788988877443 44333444467899999987776654 577777765432 222222222336689999
Q ss_pred CCEEEEEECC-C--eEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEE
Q 002591 846 YPSLLVIGCY-Q--SLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 846 g~~l~t~s~d-g--~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSg 893 (903)
|++|+..+.. | .|.++|+.++..+....+......-+|.++++.|+..
T Consensus 337 G~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~ 387 (425)
T COG0823 337 GDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFS 387 (425)
T ss_pred CCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEe
Confidence 9999988854 3 4778888776644333444444444555666554443
No 336
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.14 E-value=0.0025 Score=69.26 Aligned_cols=255 Identities=11% Similarity=0.115 Sum_probs=153.4
Q ss_pred CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEeCCCCCceeEEeccC---C---
Q 002591 645 KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSS----------FDKTVRVWDADNPGYSLRTFMGH---S--- 708 (903)
Q Consensus 645 g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs----------~Dg~I~IWDl~~~~~~~~~~~~h---~--- 708 (903)
+.|+|+|.++++.+-.+..-- .-.+..+|+++.+++++ ..-.|.+||..+ -.....+.-. .
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~--~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~T-L~~~~EI~iP~k~R~~~ 93 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGF--LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQT-LSPTGEIEIPPKPRAQV 93 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEES--SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTT-TEEEEEEEETTS-B--B
T ss_pred ceEEEEECCCCcEEEEeeccc--CCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCc-CcccceEecCCcchhee
Confidence 479999999998887776432 33466799999888753 234589999987 3333322211 1
Q ss_pred -CceEEEEecCCCCeEEEE-EeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECC-CCeEEEE
Q 002591 709 -ASVMSLDFHPNKDDLICS-CDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAE-TQACRLS 785 (903)
Q Consensus 709 -~~V~sl~fsp~~~~ll~s-gs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~-t~~~~~~ 785 (903)
.....+.++.+++++++. .+---.|.|.|+..++.+..+..+-....+-.....|.+.|.||.+..+.+. .|+...+
T Consensus 94 ~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~ 173 (342)
T PF06433_consen 94 VPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQK 173 (342)
T ss_dssp S--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEE
T ss_pred cccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEe
Confidence 112235677777765532 2334568889999999888887665554443334678899999999888887 4444322
Q ss_pred ----ecCCCCCe-EEEEEcCCCC-EEEEEeCCeEEEEECCCCCCcceEEEeecC----------CCceEEEEEeCCCCEE
Q 002591 786 ----LQGHTKPI-DSVCWDPSGE-LLASVSEDSVRVWTVGSGSEGECVHELSCN----------GNKFHSCVFHPTYPSL 849 (903)
Q Consensus 786 ----l~~h~~~V-~sl~~spdg~-~lasgs~d~I~iwdl~s~~~~~~i~~~~~~----------~~~i~si~~sp~g~~l 849 (903)
|.....++ ..-++...+. +++..-.+.|+-.|+.... ......+..- .+...-+++++....|
T Consensus 174 ~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~-~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rl 252 (342)
T PF06433_consen 174 STKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDS-AKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRL 252 (342)
T ss_dssp EEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSS-EEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEE
T ss_pred eccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCc-ccccCcccccCccccccCcCCcceeeeeeccccCeE
Confidence 11222222 2334444444 4444434477777776542 2222222110 1123346788766666
Q ss_pred EEEECCC----------eEEEEECCCCcEEEEccCCCCEEEEEEecCCC-EEEEEe-cCCcEEEcC
Q 002591 850 LVIGCYQ----------SLELWNMSENKTMTLTAHEGLIAALAVSTETG-YVASAS-HDKFVKLWK 903 (903)
Q Consensus 850 ~t~s~dg----------~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~-~LaSgs-~DG~I~IWd 903 (903)
++.-..+ .|.+||+.+++.+....-+..+.+|.++.+.+ +|++.+ .++.|.|||
T Consensus 253 yvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D 318 (342)
T PF06433_consen 253 YVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYD 318 (342)
T ss_dssp EEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEE
T ss_pred EEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEe
Confidence 6643221 68889999999985554455688999998776 665544 578999986
No 337
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.11 E-value=3.9e-05 Score=88.73 Aligned_cols=109 Identities=16% Similarity=0.230 Sum_probs=84.6
Q ss_pred EEEEEcCCCCEEEEEe----CCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 627 ICCHFSSDGKLLATGG----HDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 627 ~~l~fspdg~~Latgs----~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
+-+.|+|...++|+++ ..|.|.||- ++|++-+.... .-.+++++|+|..-.|+.|=.-|.+.+|...+ .+...
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~-~e~ht 95 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNT-TETHT 95 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc-ceehhhhccChHHHHHhhccccceeEEEecCC-ceeee
Confidence 3457899989998886 357898884 56665443321 12356799999988889998899999999886 44455
Q ss_pred EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC
Q 002591 703 TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 739 (903)
Q Consensus 703 ~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~ 739 (903)
....|..+|..+.|+++|..++ ++..-|.|.+|...
T Consensus 96 v~~th~a~i~~l~wS~~G~~l~-t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 96 VVETHPAPIQGLDWSHDGTVLM-TLDNPGSVHLWRYD 131 (1416)
T ss_pred eccCCCCCceeEEecCCCCeEE-EcCCCceeEEEEee
Confidence 5567999999999999988655 99999999999876
No 338
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.11 E-value=0.00084 Score=78.29 Aligned_cols=182 Identities=8% Similarity=-0.043 Sum_probs=113.4
Q ss_pred ecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeEEEecCCCEEEEEEcC----CeEEEEECCCCeEEEEecCC
Q 002591 716 FHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQMRFQPHLGRYLAAAAE----NVVSILDAETQACRLSLQGH 789 (903)
Q Consensus 716 fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v~~sp~~~~ll~~s~d----g~I~i~D~~t~~~~~~l~~h 789 (903)
+.+++..+..+.-..+.+.++|.++.+....+. +....+.++++++++++++.+ .++...+..+...+..+.-.
T Consensus 200 lpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~ 279 (635)
T PRK02888 200 LPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIA 279 (635)
T ss_pred cCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchH
Confidence 344554444344445677777888776655543 334557889999998888632 34555544433322222211
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCC--CcceEEEeecCCCceEEEEEeCCCCEEEEEEC-CCeEEEEECCCC
Q 002591 790 TKPIDSVCWDPSGELLASVSEDSVRVWTVGSGS--EGECVHELSCNGNKFHSCVFHPTYPSLLVIGC-YQSLELWNMSEN 866 (903)
Q Consensus 790 ~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~--~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~-dg~I~vwdl~~~ 866 (903)
.+ -.+.++|++... ..+.|.++|.++.. ....+..+. -......+.++|||+++++++. +.+|.|+|+.+.
T Consensus 280 --~i--ea~vkdGK~~~V-~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~ 353 (635)
T PRK02888 280 --RI--EEAVKAGKFKTI-GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKL 353 (635)
T ss_pred --HH--HHhhhCCCEEEE-CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhh
Confidence 01 134457886665 33489999998710 113333333 3667888999999999888776 679999999886
Q ss_pred cE------------EEEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 867 KT------------MTLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 867 ~~------------~~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+. +.-..-.-.....+|+.+|..+.|---|..|..||
T Consensus 354 k~~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn 402 (635)
T PRK02888 354 DDLFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWN 402 (635)
T ss_pred hhhhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEe
Confidence 53 21111233345678889988888888899999996
No 339
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.09 E-value=0.0014 Score=77.06 Aligned_cols=242 Identities=14% Similarity=0.152 Sum_probs=136.5
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeccCCCC-----eE-EEEECCCCCEEEEEe---------CCCcEEEEeCCCCCce
Q 002591 636 KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSL-----IT-DVRFSPSMPRLATSS---------FDKTVRVWDADNPGYS 700 (903)
Q Consensus 636 ~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~-----V~-~l~fspdg~~Lasgs---------~Dg~I~IWDl~~~~~~ 700 (903)
..++.++.++.|+.+|.++++.+-.+...... |. ...+. +..++.++ .++.|..+|..+ ++.
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~T-G~~ 187 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVET-GKL 187 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCC-Cce
Confidence 57788888999999999999998887644321 11 11121 23455553 367889999988 555
Q ss_pred eEEeccCCC--------------------ceE-EEEecCCCCeEEEEEeCCC------------------cEEEEEcCCC
Q 002591 701 LRTFMGHSA--------------------SVM-SLDFHPNKDDLICSCDGDG------------------EIRYWSINNG 741 (903)
Q Consensus 701 ~~~~~~h~~--------------------~V~-sl~fsp~~~~ll~sgs~Dg------------------~I~iwDi~t~ 741 (903)
+..+..... .|+ ...+.+.++ +++.++.++ .|.-+|++++
T Consensus 188 ~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g-~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG 266 (488)
T cd00216 188 LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTN-LVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTG 266 (488)
T ss_pred eeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCC-EEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCC
Confidence 444432111 011 123333344 344565454 7999999999
Q ss_pred eeeEEeecCce---------eEEEe----cCCC---EEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEE
Q 002591 742 SCTRVFKGGTA---------QMRFQ----PHLG---RYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELL 805 (903)
Q Consensus 742 ~~~~~~~~~~~---------~v~~s----p~~~---~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~l 805 (903)
+.+..+..... ...+. -++. .+++++.+|.+..+|.++++.+...... ...++.+| +.++
T Consensus 267 ~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~-~~vy 342 (488)
T cd00216 267 KVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP-GLVY 342 (488)
T ss_pred CEEEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC-ceEE
Confidence 98877653211 01111 1222 4677778999999999999988875421 11223333 2222
Q ss_pred EEE-----------------eCC-eEEEEECCCCCCcceEEEeecCC--------CceEEEEEeCCCCEEEEEECCCeEE
Q 002591 806 ASV-----------------SED-SVRVWTVGSGSEGECVHELSCNG--------NKFHSCVFHPTYPSLLVIGCYQSLE 859 (903)
Q Consensus 806 asg-----------------s~d-~I~iwdl~s~~~~~~i~~~~~~~--------~~i~si~~sp~g~~l~t~s~dg~I~ 859 (903)
+.. ..+ .|.-+|+.+++. +-...... .........-.+..|++++.||.|+
T Consensus 343 v~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~---~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ 419 (488)
T cd00216 343 LGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKV---VWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFR 419 (488)
T ss_pred EccccccccCcccccCCCCCCCceEEEEEeCCCCcE---eeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEE
Confidence 211 112 677777777642 22221110 1111111122556789999999999
Q ss_pred EEECCCCcEEEEccCCCCEEE--EEEecCCC
Q 002591 860 LWNMSENKTMTLTAHEGLIAA--LAVSTETG 888 (903)
Q Consensus 860 vwdl~~~~~~~~~~h~~~V~s--l~~spdg~ 888 (903)
.+|..+|+.+........+.+ +.+..+++
T Consensus 420 ald~~tG~~lW~~~~~~~~~a~P~~~~~~g~ 450 (488)
T cd00216 420 AFDATTGKELWKFRTPSGIQATPMTYEVNGK 450 (488)
T ss_pred EEECCCCceeeEEECCCCceEcCEEEEeCCE
Confidence 999999998833333333332 23344554
No 340
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.08 E-value=0.00044 Score=83.97 Aligned_cols=227 Identities=13% Similarity=0.188 Sum_probs=133.2
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee
Q 002591 664 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 743 (903)
Q Consensus 664 h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~ 743 (903)
..+.|.++.|.-+..-|+.+..+|.|.+-|..+. .+.....-...|.+++|+||.. +++..+.+++|.+-+ .+...
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~--~~eivg~vd~GI~aaswS~Dee-~l~liT~~~tll~mT-~~f~~ 142 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETL--ELEIVGNVDNGISAASWSPDEE-LLALITGRQTLLFMT-KDFEP 142 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEccccc--ceeeeeeccCceEEEeecCCCc-EEEEEeCCcEEEEEe-ccccc
Confidence 3468999999999999999999999999988763 2333334567899999999977 444555566665533 22221
Q ss_pred eEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCC----------eEEEEecCCCCCeEEEEEcCCCCEEEEE-----
Q 002591 744 TRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQ----------ACRLSLQGHTKPIDSVCWDPSGELLASV----- 808 (903)
Q Consensus 744 ~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~----------~~~~~l~~h~~~V~sl~~spdg~~lasg----- 808 (903)
+....... .-.+ .+.++.++....=.-|....+ +.......-.+.=++|+|--||.++|+.
T Consensus 143 i~E~~L~~---d~~~-~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~ 218 (1265)
T KOG1920|consen 143 IAEKPLDA---DDER-KSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESE 218 (1265)
T ss_pred hhcccccc---cccc-ccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEecc
Confidence 11110000 0000 012222222221111111111 1000000011223468999999999883
Q ss_pred eC-CeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEEC---CCeEEEEECCCCcEE----EEccCCCCEEE
Q 002591 809 SE-DSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGC---YQSLELWNMSENKTM----TLTAHEGLIAA 880 (903)
Q Consensus 809 s~-d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~---dg~I~vwdl~~~~~~----~~~~h~~~V~s 880 (903)
.. ..|+|||-. + ..-..-....+.-.+++|-|.|..+++... |+.|.+|.-+.-+.- .+......|..
T Consensus 219 ~~~RkirV~drE-g---~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~ 294 (1265)
T KOG1920|consen 219 TGTRKIRVYDRE-G---ALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEE 294 (1265)
T ss_pred CCceeEEEeccc-c---hhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchhe
Confidence 33 279999976 2 111111122444567899999998888754 457999987654432 23344455999
Q ss_pred EEEecCCCEEEE---EecCCcEEEc
Q 002591 881 LAVSTETGYVAS---ASHDKFVKLW 902 (903)
Q Consensus 881 l~~spdg~~LaS---gs~DG~I~IW 902 (903)
++|+.++..|++ ......|++|
T Consensus 295 L~Wns~sdiLAv~~~~~e~~~v~lw 319 (1265)
T KOG1920|consen 295 LAWNSNSDILAVVTSNLENSLVQLW 319 (1265)
T ss_pred eeecCCCCceeeeecccccceEEEE
Confidence 999999999887 4444458888
No 341
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=98.03 E-value=0.007 Score=65.87 Aligned_cols=236 Identities=14% Similarity=0.173 Sum_probs=142.7
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEECCCCceeEEeccCCC-------CeEEEEECCCCCEEEEEeC--CCc
Q 002591 628 CCHFSSDGKLLATGG----------HDKKAVLWHTDTLKSKTNLEEHSS-------LITDVRFSPSMPRLATSSF--DKT 688 (903)
Q Consensus 628 ~l~fspdg~~Latgs----------~Dg~V~vWd~~t~~~~~~l~~h~~-------~V~~l~fspdg~~Lasgs~--Dg~ 688 (903)
.+..+||++.+++++ ....|.+||..+......+.-... ....+.++.|++++++... --.
T Consensus 40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~S 119 (342)
T PF06433_consen 40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATS 119 (342)
T ss_dssp EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEE
T ss_pred ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCe
Confidence 366789999888754 344699999999888776543222 2334678888888877644 456
Q ss_pred EEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC-CCeeeEEe----ecCc----eeEEEecC
Q 002591 689 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN-NGSCTRVF----KGGT----AQMRFQPH 759 (903)
Q Consensus 689 I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~-t~~~~~~~----~~~~----~~v~~sp~ 759 (903)
|.|-|+.. ++.+..+.- .+++. + .|.++.-|.+-+.||.+....+. .|+..... .... ..-.+...
T Consensus 120 VtVVDl~~-~kvv~ei~~-PGC~~-i--yP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~ 194 (342)
T PF06433_consen 120 VTVVDLAA-KKVVGEIDT-PGCWL-I--YPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRD 194 (342)
T ss_dssp EEEEETTT-TEEEEEEEG-TSEEE-E--EEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETT
T ss_pred EEEEECCC-CceeeeecC-CCEEE-E--EecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECC
Confidence 88899987 555555542 22222 2 23332234466679999998887 45543222 1111 12334556
Q ss_pred CCEEEEEEcCCeEEEEECCCCeEEE--EecCC----------CCCeEEEEEcCCCCEEEEEe--------CC---eEEEE
Q 002591 760 LGRYLAAAAENVVSILDAETQACRL--SLQGH----------TKPIDSVCWDPSGELLASVS--------ED---SVRVW 816 (903)
Q Consensus 760 ~~~ll~~s~dg~I~i~D~~t~~~~~--~l~~h----------~~~V~sl~~spdg~~lasgs--------~d---~I~iw 816 (903)
++.++..+.+|.|+-.|+....... .+..- .+...-+++++....|++.- .+ .|.+|
T Consensus 195 ~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~ 274 (342)
T PF06433_consen 195 GGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVY 274 (342)
T ss_dssp TTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEE
T ss_pred CCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEE
Confidence 6788888999999999887664322 22111 12233477877555444321 11 48888
Q ss_pred ECCCCCCcceEEEeecCCCceEEEEEeCCCC-EEEEEE-CCCeEEEEECCCCcEEEEc
Q 002591 817 TVGSGSEGECVHELSCNGNKFHSCVFHPTYP-SLLVIG-CYQSLELWNMSENKTMTLT 872 (903)
Q Consensus 817 dl~s~~~~~~i~~~~~~~~~i~si~~sp~g~-~l~t~s-~dg~I~vwdl~~~~~~~~~ 872 (903)
|+.++ +.+..+.. +..+.++..+.+.+ .|++.+ .++.|.+||..+++.+...
T Consensus 275 D~~t~---krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~ 328 (342)
T PF06433_consen 275 DLKTH---KRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSI 328 (342)
T ss_dssp ETTTT---EEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE
T ss_pred ECCCC---eEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeeh
Confidence 88877 55555543 34577888888765 565554 4689999999999988433
No 342
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.01 E-value=0.0014 Score=75.29 Aligned_cols=221 Identities=11% Similarity=0.116 Sum_probs=117.5
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEE-eCCCCCc
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVW-DADNPGY 699 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IW-Dl~~~~~ 699 (903)
...-....+.++|+|++++++ .||...||.....+.... +.-...+|...+ .+|+-....+|.|+ ++++ .
T Consensus 30 ~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~~-----G~g~~~vw~~~n-~yAv~~~~~~I~I~kn~~~--~ 100 (443)
T PF04053_consen 30 SCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKAF-----GSGLSFVWSSRN-RYAVLESSSTIKIYKNFKN--E 100 (443)
T ss_dssp E-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEEE-----EE-SEEEE-TSS-EEEEE-TTS-EEEEETTEE---
T ss_pred CCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCccccc-----CceeEEEEecCc-cEEEEECCCeEEEEEcCcc--c
Confidence 344558899999999999985 588888888544444332 234568898854 56666668889996 4432 2
Q ss_pred eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecC-ceeEEEecCCCEEEEEEcCCeEEEEECC
Q 002591 700 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGG-TAQMRFQPHLGRYLAAAAENVVSILDAE 778 (903)
Q Consensus 700 ~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~-~~~v~~sp~~~~ll~~s~dg~I~i~D~~ 778 (903)
....+.. ...+..|-. |. +|+..+ ++.|.+||+.+++.++.+... +..+.|++++..++..+.+ .++|++.+
T Consensus 101 ~~k~i~~-~~~~~~If~---G~-LL~~~~-~~~i~~yDw~~~~~i~~i~v~~vk~V~Ws~~g~~val~t~~-~i~il~~~ 173 (443)
T PF04053_consen 101 VVKSIKL-PFSVEKIFG---GN-LLGVKS-SDFICFYDWETGKLIRRIDVSAVKYVIWSDDGELVALVTKD-SIYILKYN 173 (443)
T ss_dssp TT------SS-EEEEE----SS-SEEEEE-TTEEEEE-TTT--EEEEESS-E-EEEEE-TTSSEEEEE-S--SEEEEEE-
T ss_pred cceEEcC-CcccceEEc---Cc-EEEEEC-CCCEEEEEhhHcceeeEEecCCCcEEEEECCCCEEEEEeCC-eEEEEEec
Confidence 2222221 123444433 44 454444 458999999999999999876 5899999998887777654 56665543
Q ss_pred CC-----------eEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCC
Q 002591 779 TQ-----------ACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYP 847 (903)
Q Consensus 779 t~-----------~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~ 847 (903)
.. .....+..-...|.+.+|..+ .|+-.+...|+. +..+. ...+.. -+.++.-+.+.+..+
T Consensus 174 ~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~~lkY--l~~Ge-~~~i~~---ld~~~yllgy~~~~~ 245 (443)
T PF04053_consen 174 LEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSNHLKY--LVNGE-TGIIAH---LDKPLYLLGYLPKEN 245 (443)
T ss_dssp HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TTEEEE--EETTE-EEEEEE----SS--EEEEEETTTT
T ss_pred chhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCCeEEE--EEcCC-cceEEE---cCCceEEEEEEccCC
Confidence 32 022222222478899999966 444444446666 33331 122222 245666677777777
Q ss_pred EEEEEECCCeEEEEECCC
Q 002591 848 SLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 848 ~l~t~s~dg~I~vwdl~~ 865 (903)
.++....++.|..+.+..
T Consensus 246 ~ly~~Dr~~~v~~~~ld~ 263 (443)
T PF04053_consen 246 RLYLIDRDGNVISYELDL 263 (443)
T ss_dssp EEEEE-TT--EEEEE--H
T ss_pred EEEEEECCCCEEEEEECH
Confidence 788888887777776643
No 343
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.01 E-value=0.0018 Score=73.78 Aligned_cols=219 Identities=15% Similarity=0.097 Sum_probs=150.2
Q ss_pred CCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC---CCcEEEEeCCCCCc
Q 002591 624 SKVICCHFSSDGKLL-ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF---DKTVRVWDADNPGY 699 (903)
Q Consensus 624 ~~V~~l~fspdg~~L-atgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~---Dg~I~IWDl~~~~~ 699 (903)
..-.+++++++++.+ ++...++.|.+.|..+.+....+..-. .-..++|+++++.++.+.. +++|.+.|..+ .+
T Consensus 74 ~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t-~~ 151 (381)
T COG3391 74 VYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAAT-NK 151 (381)
T ss_pred ccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCC-Ce
Confidence 344578888888844 444456899999988776666654333 6778999999988777765 68888888887 44
Q ss_pred eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE-E----e--ecCceeEEEecCCCEEEEEEcC---
Q 002591 700 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR-V----F--KGGTAQMRFQPHLGRYLAAAAE--- 769 (903)
Q Consensus 700 ~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~-~----~--~~~~~~v~~sp~~~~ll~~s~d--- 769 (903)
.+.+......+ ..+++.|++..++++-..++.|.+.|.......+ . . ......+.+.+++.++.+....
T Consensus 152 ~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~ 230 (381)
T COG3391 152 VTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGS 230 (381)
T ss_pred EEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCC
Confidence 44444433334 7899999999888777789999999988776663 1 1 1234568899999977776654
Q ss_pred CeEEEEECCCCeEEEEecCCCC-CeEEEEEcCCCCEEEEEeCC--eEEEEECCCCCCcceEEEeecCCCceEEEEEeCC
Q 002591 770 NVVSILDAETQACRLSLQGHTK-PIDSVCWDPSGELLASVSED--SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPT 845 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~-~V~sl~~spdg~~lasgs~d--~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~ 845 (903)
+.+.+.|..++........-.. ....+.++|+|.++.+.... .+.+.|..+......+.........+..+++.+.
T Consensus 231 ~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
T COG3391 231 NNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPL 309 (381)
T ss_pred ceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceeccceee
Confidence 5999999999877765222222 45678999999977776443 8899998776333333332222333555555544
No 344
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.01 E-value=0.0049 Score=63.31 Aligned_cols=141 Identities=13% Similarity=0.073 Sum_probs=91.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEE-
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMS- 713 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~s- 713 (903)
.++++.|+..+.+.--|..+|+.+.+-.- ...|.+-+.- -|++++.|+..|.+++.+.++ +..+..+.... .|.+
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~il-g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~t-Gs~~w~f~~~~-~vk~~ 98 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL-GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKT-GSQIWNFVILE-TVKVR 98 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhh-CceeeeeeEE-ECCEEEEEEccCcEEEEEecc-hhheeeeeehh-hhccc
Confidence 34777888888888888888877655321 1222222222 467899999999999999998 43344333221 2221
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCc---eeEEEecCCCEEEEEEcCCeEEEEECCCC
Q 002591 714 LDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGT---AQMRFQPHLGRYLAAAAENVVSILDAETQ 780 (903)
Q Consensus 714 l~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~---~~v~~sp~~~~ll~~s~dg~I~i~D~~t~ 780 (903)
....+++. +++.++.|++.+..|.++..|+...+.+- ..-++.+-.+.++++...|.|.-...++.
T Consensus 99 a~~d~~~g-lIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~ 167 (354)
T KOG4649|consen 99 AQCDFDGG-LIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPY 167 (354)
T ss_pred eEEcCCCc-eEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCC
Confidence 22334444 77899999999999999999988766432 22345665566777777666655554443
No 345
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.00 E-value=0.00067 Score=77.66 Aligned_cols=201 Identities=17% Similarity=0.220 Sum_probs=127.5
Q ss_pred EEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeC---C-CcEEEEeCCCCCc-eeEEeccCCCceEEEEecCCCC
Q 002591 647 AVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSF---D-KTVRVWDADNPGY-SLRTFMGHSASVMSLDFHPNKD 721 (903)
Q Consensus 647 V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~---D-g~I~IWDl~~~~~-~~~~~~~h~~~V~sl~fsp~~~ 721 (903)
+.+-|.+ +.....+......+..-+|++++..++..+. . ..|.++|++++.. .+..+.++.. ...|+|+|.
T Consensus 175 l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~---~P~fspDG~ 250 (425)
T COG0823 175 LALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNG---APAFSPDGS 250 (425)
T ss_pred EEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccC---CccCCCCCC
Confidence 3344433 5556666666677888899999987655532 2 3589999987432 2333444443 488999999
Q ss_pred eEEEEEeCCCcE--EEEEcCCCeeeEEe--ecCceeEEEecCCCEEEEEEcC-C--eEEEEECCCCeEEEEecCCCCCeE
Q 002591 722 DLICSCDGDGEI--RYWSINNGSCTRVF--KGGTAQMRFQPHLGRYLAAAAE-N--VVSILDAETQACRLSLQGHTKPID 794 (903)
Q Consensus 722 ~ll~sgs~Dg~I--~iwDi~t~~~~~~~--~~~~~~v~~sp~~~~ll~~s~d-g--~I~i~D~~t~~~~~~l~~h~~~V~ 794 (903)
.++++...||.. +++|+..+...+.. .+....-.|+|+|..++.++.. | .|.++|.+......... ....-.
T Consensus 251 ~l~f~~~rdg~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~-~~~~~~ 329 (425)
T COG0823 251 KLAFSSSRDGSPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTF-SGGGNS 329 (425)
T ss_pred EEEEEECCCCCccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeec-cCCCCc
Confidence 999888888864 55577666543311 2233456799999998888764 3 67778888775533322 222222
Q ss_pred EEEEcCCCCEEEEEeC--C--eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC
Q 002591 795 SVCWDPSGELLASVSE--D--SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ 856 (903)
Q Consensus 795 sl~~spdg~~lasgs~--d--~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg 856 (903)
.-.|+|||++|+..+. + .|.+.|+.++.. +..+. .......-.|.++++.++..+..+
T Consensus 330 ~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~---~~~lt-~~~~~e~ps~~~ng~~i~~~s~~~ 391 (425)
T COG0823 330 NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK---IRILT-STYLNESPSWAPNGRMIMFSSGQG 391 (425)
T ss_pred CccCCCCCCEEEEEeccCCceeeEEeccCCCCc---EEEcc-ccccCCCCCcCCCCceEEEeccCC
Confidence 7789999998887773 2 477888776643 22211 122333446778888777665543
No 346
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.99 E-value=0.0036 Score=66.21 Aligned_cols=198 Identities=14% Similarity=0.185 Sum_probs=115.8
Q ss_pred eeEeecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeEEeccC-CCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 002591 616 ANSVRASTSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTNLEEH-SSLITDVRFSPSMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 616 ~~~l~~H~~~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t~~~~~~l~~h-~~~V~~l~fspdg~~Lasgs~Dg~I~IWD 693 (903)
...+.+-...|..|+|+|+.+ ++|+....+.|..++. +++.++++.-. .+..-.|++..++.++++.-.++.+.+++
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 345666666799999999755 6666777788888886 47888877643 35688999988887777666689999999
Q ss_pred CCCCCce-----eEEec-----cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCC---CeeeEE-----------eec
Q 002591 694 ADNPGYS-----LRTFM-----GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINN---GSCTRV-----------FKG 749 (903)
Q Consensus 694 l~~~~~~-----~~~~~-----~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t---~~~~~~-----------~~~ 749 (903)
+...... +..+. .+...+-.|+|.+.++.++++. +..-..||.+.. ...+.. +..
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~k-E~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAK-ERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVR 171 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEE-ESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEe-CCCChhhEEEccccCccceeeccccccccccceec
Confidence 8542211 11121 2445689999999988888554 455566666653 211111 112
Q ss_pred CceeEEEecCCCEEEEEEc-CCeEEEEECCCCeEEEEecCCC---------CCeEEEEEcCCCCEEEEEeCCeEEEE
Q 002591 750 GTAQMRFQPHLGRYLAAAA-ENVVSILDAETQACRLSLQGHT---------KPIDSVCWDPSGELLASVSEDSVRVW 816 (903)
Q Consensus 750 ~~~~v~~sp~~~~ll~~s~-dg~I~i~D~~t~~~~~~l~~h~---------~~V~sl~~spdg~~lasgs~d~I~iw 816 (903)
....+.++|..+.+++-+. ...|.++| .+|+.+..+.-.. ..-..|+|+++|++.++.-.+..++|
T Consensus 172 d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIvsEpNlfy~f 247 (248)
T PF06977_consen 172 DLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIVSEPNLFYRF 247 (248)
T ss_dssp ---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEEETTTEEEEE
T ss_pred cccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEEcCCceEEEe
Confidence 4567889999887777665 56788888 6676655443222 24678999999987766654455444
No 347
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.98 E-value=0.0018 Score=68.42 Aligned_cols=197 Identities=16% Similarity=0.230 Sum_probs=110.9
Q ss_pred EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee----cCceeEEEecCCCEEEEEEcCCeEEEEECC
Q 002591 703 TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK----GGTAQMRFQPHLGRYLAAAAENVVSILDAE 778 (903)
Q Consensus 703 ~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~----~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~ 778 (903)
.+.+-...+..|+|.|+.+.++|+....+.|..++.. ++.++.+. +....+++..++.++++.-.++.+.++++.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 4555666799999999999999999999999999974 77777664 345678887665444444448899998873
Q ss_pred CC------eEEEEec-----CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCC--CCCcceEEE------eecCCCceE
Q 002591 779 TQ------ACRLSLQ-----GHTKPIDSVCWDPSGELLASVSED-SVRVWTVGS--GSEGECVHE------LSCNGNKFH 838 (903)
Q Consensus 779 t~------~~~~~l~-----~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s--~~~~~~i~~------~~~~~~~i~ 838 (903)
.. ..+..+. .+...+..++|++.++.|+.+.+. -..||.+.. ......+.. .......+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 32 1111121 245568999999987766666555 556666553 111111111 111234578
Q ss_pred EEEEeCCCCEEEEEEC-CCeEEEEECCCCcEE---EEcc--C-----CCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 839 SCVFHPTYPSLLVIGC-YQSLELWNMSENKTM---TLTA--H-----EGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 839 si~~sp~g~~l~t~s~-dg~I~vwdl~~~~~~---~~~~--h-----~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
++.++|....|++-+. +..|.++| ..|+.+ .+.. | -.....|+|.++|++.++ ++-+..++|
T Consensus 175 ~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv-sEpNlfy~f 247 (248)
T PF06977_consen 175 GLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV-SEPNLFYRF 247 (248)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE-ETTTEEEEE
T ss_pred ceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE-cCCceEEEe
Confidence 8999998766666554 56888999 556655 2222 1 125789999999975555 466666655
No 348
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.97 E-value=5.5e-05 Score=87.59 Aligned_cols=259 Identities=15% Similarity=0.128 Sum_probs=153.7
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce-eEEe
Q 002591 626 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS-LRTF 704 (903)
Q Consensus 626 V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~-~~~~ 704 (903)
++++||+|..-.||.|-.-|.+.+|...+.+.......|..+|..+.|+++|..|+++..-|.|.+|.++-.+.. ...+
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~ 141 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNI 141 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchh
Confidence 566999999889999999999999998887777778899999999999999999999999999999988732221 1111
Q ss_pred ccCC--C--ceEEEEecCCCCeE-----EEEEeCCCcEE-EEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEE
Q 002591 705 MGHS--A--SVMSLDFHPNKDDL-----ICSCDGDGEIR-YWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSI 774 (903)
Q Consensus 705 ~~h~--~--~V~sl~fsp~~~~l-----l~sgs~Dg~I~-iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i 774 (903)
..|. . ..+|...++++..+ +++.+++..+- .++.+.....+.. .-.-.+++..|++++.+|+|+.
T Consensus 142 ~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~rs~-----~ksgv~~g~~F~~~~~~GtVyy 216 (1416)
T KOG3617|consen 142 MQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLAERSD-----EKSGVPKGTEFLFAGKSGTVYY 216 (1416)
T ss_pred hhhHhhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchhhccc-----cccCCCCCcEEEEEcCCceEEE
Confidence 1221 2 23445556654332 12333333332 3333321111111 1122467788899999999998
Q ss_pred EECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCC-C---------------CC-c--ce------E-
Q 002591 775 LDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGS-G---------------SE-G--EC------V- 827 (903)
Q Consensus 775 ~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s-~---------------~~-~--~~------i- 827 (903)
.|-.. ++....+.. +. ..+-|.+...-|++.-.+ ++.+|-+.. | .. + .| +
T Consensus 217 vdq~g-~~~~V~k~d-S~-vQmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEssGvLr 293 (1416)
T KOG3617|consen 217 VDQNG-RQRTVHKLD-SE-VQMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESSGVLR 293 (1416)
T ss_pred EcCCC-cEEEEEEcc-ch-HHHHHhcccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCcccccccccccc
Confidence 88443 332222211 11 123344433334433333 333332211 1 00 0 00 0
Q ss_pred ---EEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc--------EEEEc---cCCCCEEEEEEecCCCEEEE
Q 002591 828 ---HELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK--------TMTLT---AHEGLIAALAVSTETGYVAS 892 (903)
Q Consensus 828 ---~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~--------~~~~~---~h~~~V~sl~~spdg~~LaS 892 (903)
+.-...+..+.+++++..+..+..|...|.+.+|--.... ...+. ...+.|+.+.|.|-...++.
T Consensus 294 ~~eKyg~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k~~~av 372 (1416)
T KOG3617|consen 294 KSEKYGLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIKSTAAV 372 (1416)
T ss_pred CCcchhhhcCCceEEEEEeccceEEEecccCCcEEEeeecCccccCCCCcceEEecCchhhccceEEEEeccccchhhh
Confidence 0001124568899999999999999999999999533221 12222 34567899999885544443
No 349
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.96 E-value=0.0018 Score=73.37 Aligned_cols=259 Identities=13% Similarity=0.104 Sum_probs=135.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC---CC---
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN---PG--- 698 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~---~~--- 698 (903)
.|+++.|+++..-|++|...|.|.||.+...+... ......-....|.+- ...++.-.|-|+.. +.
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~~------~~~~~~~~l~di~~r~~~~~~~ 74 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRRF------SLNNSPGKLTDISDRAPPSLKE 74 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE--------------------S--------GGGSS-SEEE-GGG--TT-SE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCcccccc------cccCCCcceEEehhhCCccccc
Confidence 58999999999999999999999999876432221 000011111111110 00111222333322 11
Q ss_pred --ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--c---------CceeEEEe-----cCC
Q 002591 699 --YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--G---------GTAQMRFQ-----PHL 760 (903)
Q Consensus 699 --~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~---------~~~~v~~s-----p~~ 760 (903)
.+...+....+.|++++.+.-| ++|.|..+|.+.|.|+|....+..-. . .+.++.|. .++
T Consensus 75 gf~P~~l~~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ 152 (395)
T PF08596_consen 75 GFLPLTLLDAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDG 152 (395)
T ss_dssp EEEEEEEE---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSS
T ss_pred ccCchhheeccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCc
Confidence 2334445567899999998554 88899999999999999877665421 1 23345444 222
Q ss_pred ---CEEEEEEcCCeEEEEECC--C-Ce----EEEEecCCCCCeEEEE-EcCC---------------------CCEEEEE
Q 002591 761 ---GRYLAAAAENVVSILDAE--T-QA----CRLSLQGHTKPIDSVC-WDPS---------------------GELLASV 808 (903)
Q Consensus 761 ---~~ll~~s~dg~I~i~D~~--t-~~----~~~~l~~h~~~V~sl~-~spd---------------------g~~lasg 808 (903)
-.+++|...|.+.+|.+. . +. .......+.++|..|+ |+.+ .-+++++
T Consensus 153 ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvv 232 (395)
T PF08596_consen 153 YSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVV 232 (395)
T ss_dssp SEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE
T ss_pred ccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEE
Confidence 367888889999999764 1 21 1222224566666665 3221 1267777
Q ss_pred eCCeEEEEECCCCCCcceEEEeecCCCceEEEEE-----eCCCCEEEEEECCCeEEEEECCCCcEE-EEcc----CCCCE
Q 002591 809 SEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVF-----HPTYPSLLVIGCYQSLELWNMSENKTM-TLTA----HEGLI 878 (903)
Q Consensus 809 s~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~-----sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~----h~~~V 878 (903)
+...++|+...+. +..+...........+.+ ...+..|++...+|.|++|.+-.-+.+ .+.- +...+
T Consensus 233 Se~~irv~~~~~~---k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~ 309 (395)
T PF08596_consen 233 SESDIRVFKPPKS---KGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRL 309 (395)
T ss_dssp -SSEEEEE-TT------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHH
T ss_pred cccceEEEeCCCC---cccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccc
Confidence 7779999998765 333333322223334444 235667888899999999999988777 2222 12245
Q ss_pred EEEEEecCCCEEEEEecC
Q 002591 879 AALAVSTETGYVASASHD 896 (903)
Q Consensus 879 ~sl~~spdg~~LaSgs~D 896 (903)
...+++++|..++-.+..
T Consensus 310 ~~ssis~~Gdi~~~~gps 327 (395)
T PF08596_consen 310 SSSSISRNGDIFYWTGPS 327 (395)
T ss_dssp TT-EE-TTS-EEEE-SSS
T ss_pred cccEECCCCCEEEEeCcc
Confidence 566778888877666543
No 350
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.93 E-value=0.0026 Score=71.74 Aligned_cols=227 Identities=18% Similarity=0.193 Sum_probs=130.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cC----------------CCCeEEEEECCCCCEEEEEeC
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EH----------------SSLITDVRFSPSMPRLATSSF 685 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h----------------~~~V~~l~fspdg~~Lasgs~ 685 (903)
...+....|||+|+.||... ++.|.+++..++....... +. -+.-..+.||||+++||....
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence 66789999999999999885 6789999987664332211 10 122357889999999887754
Q ss_pred C-Cc-----------------------------------EEEEeCCCCCce-eEEe---ccCCCceEEEEecCCCCeEEE
Q 002591 686 D-KT-----------------------------------VRVWDADNPGYS-LRTF---MGHSASVMSLDFHPNKDDLIC 725 (903)
Q Consensus 686 D-g~-----------------------------------I~IWDl~~~~~~-~~~~---~~h~~~V~sl~fsp~~~~ll~ 725 (903)
| .. +.|+|+.++... +... ..-...+..+.|.+++..+++
T Consensus 121 d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~ 200 (353)
T PF00930_consen 121 DEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWV 200 (353)
T ss_dssp E-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEE
T ss_pred CCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEE
Confidence 3 22 233444432211 1111 123445778889888774443
Q ss_pred -EEeCC---CcEEEEEcCCCeeeEEeec-------CceeEEEe-cCCCEEEEE-EcCC--eEEEEECCCCeEEEEecCCC
Q 002591 726 -SCDGD---GEIRYWSINNGSCTRVFKG-------GTAQMRFQ-PHLGRYLAA-AAEN--VVSILDAETQACRLSLQGHT 790 (903)
Q Consensus 726 -sgs~D---g~I~iwDi~t~~~~~~~~~-------~~~~v~~s-p~~~~ll~~-s~dg--~I~i~D~~t~~~~~~l~~h~ 790 (903)
....+ ..+.++|..++.+...+.. ......+. +++..++.. ..+| .|++++...+... .+....
T Consensus 201 ~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~-~lT~G~ 279 (353)
T PF00930_consen 201 QWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPR-QLTSGD 279 (353)
T ss_dssp EEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEE-ESS-SS
T ss_pred EEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEccccccee-ccccCc
Confidence 33333 3466778877765444321 12345554 666655554 4455 6777788777644 455455
Q ss_pred CCeEE-EEEcCCCCEEE-EEeCC-----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEEC
Q 002591 791 KPIDS-VCWDPSGELLA-SVSED-----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGC 854 (903)
Q Consensus 791 ~~V~s-l~~spdg~~la-sgs~d-----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~ 854 (903)
-.|.. +.|+++++.|+ ++..+ .|+..++..+ ..+..+.+....-..+.|+|++++++..+.
T Consensus 280 ~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~---~~~~~LT~~~~~~~~~~~Spdg~y~v~~~s 347 (353)
T PF00930_consen 280 WEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSG---GEPKCLTCEDGDHYSASFSPDGKYYVDTYS 347 (353)
T ss_dssp S-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTET---TEEEESSTTSSTTEEEEE-TTSSEEEEEEE
T ss_pred eeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCC---CCeEeccCCCCCceEEEECCCCCEEEEEEc
Confidence 56644 67888877443 44432 4555666512 334444443333368999999999887654
No 351
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.87 E-value=0.011 Score=70.06 Aligned_cols=184 Identities=11% Similarity=0.059 Sum_probs=112.8
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCC-CCeE---E-------EEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLIT---D-------VRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 703 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~-~~V~---~-------l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~ 703 (903)
+..|++++.++.|+-+|..+++.+-.+.... ..+. + +++ .+..|+.++.|+.|...|.++ ++.+..
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~T-Gk~~W~ 145 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKT-GKVVWS 145 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCC-CCEEee
Confidence 4477777788899999999999887765321 1111 1 112 234677888899999999988 555544
Q ss_pred ecc--CC--CceEE-EEecCCCCeEEEEEe-----CCCcEEEEEcCCCeeeEEeecCc----------------------
Q 002591 704 FMG--HS--ASVMS-LDFHPNKDDLICSCD-----GDGEIRYWSINNGSCTRVFKGGT---------------------- 751 (903)
Q Consensus 704 ~~~--h~--~~V~s-l~fsp~~~~ll~sgs-----~Dg~I~iwDi~t~~~~~~~~~~~---------------------- 751 (903)
+.. +. ..+.+ -.+. ++.+++..+ .+|.|..+|.++++.+-.+....
T Consensus 146 ~~~~~~~~~~~~tssP~v~--~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw 223 (527)
T TIGR03075 146 KKNGDYKAGYTITAAPLVV--KGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTW 223 (527)
T ss_pred cccccccccccccCCcEEE--CCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCC
Confidence 331 11 11111 1111 233443222 26899999999998776543210
Q ss_pred -------------eeEEEecCCCEEEEEEcC-----C-----------eEEEEECCCCeEEEEecCCCCCe---------
Q 002591 752 -------------AQMRFQPHLGRYLAAAAE-----N-----------VVSILDAETQACRLSLQGHTKPI--------- 793 (903)
Q Consensus 752 -------------~~v~~sp~~~~ll~~s~d-----g-----------~I~i~D~~t~~~~~~l~~h~~~V--------- 793 (903)
..+.+.+..+.++.+... + .|.-.|++|++.+..+......+
T Consensus 224 ~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p 303 (527)
T TIGR03075 224 PGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEM 303 (527)
T ss_pred CCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCc
Confidence 023566666777776522 1 67788999999988776522221
Q ss_pred EEEEEcCCCC---EEEEEeCC-eEEEEECCCCCC
Q 002591 794 DSVCWDPSGE---LLASVSED-SVRVWTVGSGSE 823 (903)
Q Consensus 794 ~sl~~spdg~---~lasgs~d-~I~iwdl~s~~~ 823 (903)
.-+.+..+|+ .++.+..+ .+++.|-++++.
T Consensus 304 ~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~ 337 (527)
T TIGR03075 304 ILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKL 337 (527)
T ss_pred EEEEeccCCcEEEEEEEeCCCceEEEEECCCCce
Confidence 1122334665 66677777 899999988853
No 352
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.86 E-value=0.01 Score=64.20 Aligned_cols=221 Identities=16% Similarity=0.187 Sum_probs=124.1
Q ss_pred CCCCEEEEEeCCCcEEEEECC-CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE--------
Q 002591 633 SDGKLLATGGHDKKAVLWHTD-TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT-------- 703 (903)
Q Consensus 633 pdg~~Latgs~Dg~V~vWd~~-t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~-------- 703 (903)
..++.|+.|+.+| |.+++.. ..+...... ...|..+...++-+.|++-+ |+.|+++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 4577999999998 9999983 333333332 22399999999887777766 599999998752211100
Q ss_pred -----eccCCCceEEEE--ecCCCCeEEEEEeCCCcEEEEEcCCC-----eeeEEee--cCceeEEEecCCCEEEEEEcC
Q 002591 704 -----FMGHSASVMSLD--FHPNKDDLICSCDGDGEIRYWSINNG-----SCTRVFK--GGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 704 -----~~~h~~~V~sl~--fsp~~~~ll~sgs~Dg~I~iwDi~t~-----~~~~~~~--~~~~~v~~sp~~~~ll~~s~d 769 (903)
.......+..++ -...+...++++. ...|.+|.+... +..+.+. .....++|. ++.++++. .
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~-~ 156 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGT-S 156 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEE-CCEEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEe-C
Confidence 111223344444 1223344443443 558888887653 3344443 455667777 45565555 5
Q ss_pred CeEEEEECCCCeEEEEecCC------------CCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCce
Q 002591 770 NVVSILDAETQACRLSLQGH------------TKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKF 837 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h------------~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i 837 (903)
+...++|+.++.....+... ..++..+... ++.+|++. ++.-.+.|. .|.... ...+.- ....
T Consensus 157 ~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~-~~~g~fv~~-~G~~~r-~~~i~W-~~~p 231 (275)
T PF00780_consen 157 KGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY-DNIGVFVNK-NGEPSR-KSTIQW-SSAP 231 (275)
T ss_pred CceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe-cceEEEEcC-CCCcCc-ccEEEc-CCch
Confidence 55888899877554433211 1233333333 45566543 332333333 332222 122222 2344
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 838 HSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
..+++ ...+|++.+. +.|.||++.+++++
T Consensus 232 ~~~~~--~~pyli~~~~-~~iEV~~~~~~~lv 260 (275)
T PF00780_consen 232 QSVAY--SSPYLIAFSS-NSIEVRSLETGELV 260 (275)
T ss_pred hEEEE--ECCEEEEECC-CEEEEEECcCCcEE
Confidence 55555 3456776655 56999999999887
No 353
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.81 E-value=0.0058 Score=66.15 Aligned_cols=215 Identities=15% Similarity=0.153 Sum_probs=122.8
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE---------
Q 002591 675 PSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR--------- 745 (903)
Q Consensus 675 pdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~--------- 745 (903)
..++.|+.|+.+| |.+|++.......+... ...|..+...++-+.+++.+ |+.|+++++..-....
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs--d~~l~~~~L~~l~~~~~~~~~~~~~ 79 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS--DGQLYVYDLDSLEPVSTSAPLAFPK 79 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc--CCccEEEEchhhccccccccccccc
Confidence 3577899999888 99999943333333332 23399999998877666443 5999999987644332
Q ss_pred ------Eeec--CceeEE--EecCCCEEEEEEcCCeEEEEECCCC-----eEEEEecCCCCCeEEEEEcCCCCEEEEEeC
Q 002591 746 ------VFKG--GTAQMR--FQPHLGRYLAAAAENVVSILDAETQ-----ACRLSLQGHTKPIDSVCWDPSGELLASVSE 810 (903)
Q Consensus 746 ------~~~~--~~~~v~--~sp~~~~ll~~s~dg~I~i~D~~t~-----~~~~~l~~h~~~V~sl~~spdg~~lasgs~ 810 (903)
.+.. ++..++ -...+...+++....+|.+|..... +...++. -...+.+++|. ++.|+.+..
T Consensus 80 ~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~-lp~~~~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 80 SRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEIS-LPDPPSSIAFL--GNKICVGTS 156 (275)
T ss_pred cccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEE-cCCCcEEEEEe--CCEEEEEeC
Confidence 1111 222222 1234456667777778888876653 3444444 45788899999 677888877
Q ss_pred CeEEEEECCCCCCcceEEEeecCC---------CceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEE
Q 002591 811 DSVRVWTVGSGSEGECVHELSCNG---------NKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAA 880 (903)
Q Consensus 811 d~I~iwdl~s~~~~~~i~~~~~~~---------~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~s 880 (903)
+...+.|+.++...... ...... .....+.--+++.+|++ .+..-.+.|....... ....-...+.+
T Consensus 157 ~~f~~idl~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~--~~~~g~fv~~~G~~~r~~~i~W~~~p~~ 233 (275)
T PF00780_consen 157 KGFYLIDLNTGSPSELL-DPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC--YDNIGVFVNKNGEPSRKSTIQWSSAPQS 233 (275)
T ss_pred CceEEEecCCCCceEEe-CccCCcchhhhcccCCCceEEEEeCCceEEEE--ecceEEEEcCCCCcCcccEEEcCCchhE
Confidence 78999999866432222 111111 11222222234444443 2334444454433222 11122335556
Q ss_pred EEEecCCCEEEEEecCCcEEEcC
Q 002591 881 LAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 881 l~~spdg~~LaSgs~DG~I~IWd 903 (903)
+++. ..||+..+. +.|.||+
T Consensus 234 ~~~~--~pyli~~~~-~~iEV~~ 253 (275)
T PF00780_consen 234 VAYS--SPYLIAFSS-NSIEVRS 253 (275)
T ss_pred EEEE--CCEEEEECC-CEEEEEE
Confidence 6663 347777655 4488774
No 354
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=97.80 E-value=0.051 Score=57.14 Aligned_cols=271 Identities=11% Similarity=0.033 Sum_probs=149.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccC--CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCce
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH--SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYS 700 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h--~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~ 700 (903)
.+-+.++.|+.+ +...+..+.-++|+|+.+...-..+..- .+.-.++. -.|++..++..|.-+.+.|+.++..+
T Consensus 86 ~~l~~Dv~vse~--yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~--vsGn~aYVadlddgfLivdvsdpssP 161 (370)
T COG5276 86 RDLFADVRVSEE--YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVY--VSGNYAYVADLDDGFLIVDVSDPSSP 161 (370)
T ss_pred hhhhheeEeccc--EEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEE--ecCCEEEEeeccCcEEEEECCCCCCc
Confidence 456777888755 7777777788999999865443333221 12233333 35789988887777889999886654
Q ss_pred e--EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe---eeEEeecCceeEEEecCCCEEEEEEcCCeEEEE
Q 002591 701 L--RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS---CTRVFKGGTAQMRFQPHLGRYLAAAAENVVSIL 775 (903)
Q Consensus 701 ~--~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~---~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~ 775 (903)
. ..+.......+.++.+ |+ ..+.+..|+-+.|.|+.... .+..+..+...-..++.+++.++...+..+.+.
T Consensus 162 ~lagrya~~~~d~~~v~IS--Gn-~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~egvliv 238 (370)
T COG5276 162 QLAGRYALPGGDTHDVAIS--GN-YAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYDEGVLIV 238 (370)
T ss_pred eeeeeeccCCCCceeEEEe--cC-eEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcccceEEE
Confidence 3 2333344444667776 34 34466678999999997654 344444332333444555566666666677788
Q ss_pred ECCCCeEEEEecC-CCCCeEEE-EEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEE
Q 002591 776 DAETQACRLSLQG-HTKPIDSV-CWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVI 852 (903)
Q Consensus 776 D~~t~~~~~~l~~-h~~~V~sl-~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~ 852 (903)
|..+.+....+.. .+..+.++ .+.-.+++......+ .+-+.|+.+.........+......-..+.. .+.++..+
T Consensus 239 d~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~a--y~~y~yia 316 (370)
T COG5276 239 DVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRA--YGNYNYIA 316 (370)
T ss_pred ecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccCCCCCchhccccCCCccccceEE--ecCeeEec
Confidence 8777663333321 11222222 233336666666555 6777777665332222222222212222222 22233333
Q ss_pred ECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 853 GCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 853 s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
..+ ...+.|....+.. ...+....+.+++.+-+.+++.+...++.+.||+
T Consensus 317 dkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~ 367 (370)
T COG5276 317 DKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIE 367 (370)
T ss_pred cCC-ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEE
Confidence 332 3334444333322 2222233344555555666888888999999985
No 355
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.78 E-value=0.023 Score=65.26 Aligned_cols=189 Identities=14% Similarity=0.131 Sum_probs=99.9
Q ss_pred cEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC-----ceeEEeccCCCceEEEEecCCC
Q 002591 646 KAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG-----YSLRTFMGHSASVMSLDFHPNK 720 (903)
Q Consensus 646 ~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~-----~~~~~~~~h~~~V~sl~fsp~~ 720 (903)
.|.||+. .|+.+.++.-..+.|.++.|+.+. .|++-..||.+++||+.... ..+....-....|....+..+|
T Consensus 62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~G 139 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNG 139 (410)
T ss_pred EEEEECC-CCCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCC
Confidence 4888885 466777766555899999998864 55566689999999996311 0011111111222222333233
Q ss_pred CeEEEEEeCCCcEEEEEcCCCe-eeEEe---ecCce----------eEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEe
Q 002591 721 DDLICSCDGDGEIRYWSINNGS-CTRVF---KGGTA----------QMRFQPHLGRYLAAAAENVVSILDAETQACRLSL 786 (903)
Q Consensus 721 ~~ll~sgs~Dg~I~iwDi~t~~-~~~~~---~~~~~----------~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l 786 (903)
+++. ..++.|.+.+-.... ..+.+ ..... ...+..+....+....++.+.+.+....+. +
T Consensus 140 --ivvL-t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i 213 (410)
T PF04841_consen 140 --IVVL-TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I 213 (410)
T ss_pred --EEEE-CCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c
Confidence 3322 234444443322211 11111 11000 012333444444444555555444332211 1
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecC-CCceEEEEEeCCC
Q 002591 787 QGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCN-GNKFHSCVFHPTY 846 (903)
Q Consensus 787 ~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~-~~~i~si~~sp~g 846 (903)
. ..+++..+++||+|++||....+ .+.|....-. +.+.++... ......+.|+-+.
T Consensus 214 ~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~---~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 214 D-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFS---EKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred c-CCCCeEEEEECCCCCEEEEEECCCCEEEEECccc---ceeEEeecCcCCCCcEEEEECCC
Confidence 1 24689999999999999988887 7777765332 333343332 3456677776654
No 356
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.78 E-value=8.3e-06 Score=92.16 Aligned_cols=196 Identities=17% Similarity=0.210 Sum_probs=133.7
Q ss_pred CCeEEEEECCCC--CEEEEEeCCCcEEEEeCCCCCce-eEEeccCCCceEEEEecCCCCeEEEEEe----CCCcEEEEEc
Q 002591 666 SLITDVRFSPSM--PRLATSSFDKTVRVWDADNPGYS-LRTFMGHSASVMSLDFHPNKDDLICSCD----GDGEIRYWSI 738 (903)
Q Consensus 666 ~~V~~l~fspdg--~~Lasgs~Dg~I~IWDl~~~~~~-~~~~~~h~~~V~sl~fsp~~~~ll~sgs----~Dg~I~iwDi 738 (903)
..+.|+++..+. ..+++|..+|.|.+-.++.+... .....++...+++++|.+-...+||+|- .|..+.|||+
T Consensus 57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi 136 (783)
T KOG1008|consen 57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDI 136 (783)
T ss_pred CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceec
Confidence 346677665543 36788899999999988764333 4556678899999999987666776653 3678999999
Q ss_pred CCCe--ee--EE----eecCceeEEEecCCCEEEEEEcCCeEEEEECCCC-eEEEEecCCCCCeEEEEEcC-CCCEEEEE
Q 002591 739 NNGS--CT--RV----FKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDP-SGELLASV 808 (903)
Q Consensus 739 ~t~~--~~--~~----~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~sp-dg~~lasg 808 (903)
.++- .. .. ...+...+||..+.+.+++|.....+.++|++-. ..... -.+..|..+..+| .+.|+++.
T Consensus 137 ~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~s--vnTk~vqG~tVdp~~~nY~cs~ 214 (783)
T KOG1008|consen 137 NSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSS--VNTKYVQGITVDPFSPNYFCSN 214 (783)
T ss_pred ccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhh--hhhhhcccceecCCCCCceecc
Confidence 8761 11 11 1234567889977788888888899999999833 21111 1345677788888 78899988
Q ss_pred eCCeEEEEE-CCCCCCcceEEEeecC----CCceEEEEEeCCCC-EEEEEECC-CeEEEEECCC
Q 002591 809 SEDSVRVWT-VGSGSEGECVHELSCN----GNKFHSCVFHPTYP-SLLVIGCY-QSLELWNMSE 865 (903)
Q Consensus 809 s~d~I~iwd-l~s~~~~~~i~~~~~~----~~~i~si~~sp~g~-~l~t~s~d-g~I~vwdl~~ 865 (903)
.++.|.+|| .++.+. .+..+... ...+..++|+|... .+++...| ++|++||+..
T Consensus 215 ~dg~iAiwD~~rnien--pl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 215 SDGDIAIWDTYRNIEN--PLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred ccCceeeccchhhhcc--HHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 877999999 433221 11111111 23488999999654 34455544 6899999853
No 357
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.77 E-value=0.00015 Score=82.52 Aligned_cols=74 Identities=23% Similarity=0.290 Sum_probs=64.5
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
.....|.|++++|+.+.|+.|+.||.|.+||...+. ..+....-..+.++|+|+|..|++|+..|.|.+||+.-
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~--t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGV--TLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCe--eeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 577899999999999999999999999999987653 33334556689999999999999999999999999975
No 358
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.73 E-value=0.004 Score=69.23 Aligned_cols=206 Identities=14% Similarity=0.094 Sum_probs=115.5
Q ss_pred cEEEEeCCCCCceeEEecc-CCCceEEEE---ecCC---CCeEEEEEeC----------CCcEEEEEcCCC-----eeeE
Q 002591 688 TVRVWDADNPGYSLRTFMG-HSASVMSLD---FHPN---KDDLICSCDG----------DGEIRYWSINNG-----SCTR 745 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~-h~~~V~sl~---fsp~---~~~ll~sgs~----------Dg~I~iwDi~t~-----~~~~ 745 (903)
.|+|.|..+ ...+..+.- ....|++++ |..+ ...+|+.|.. .|.|.++++... ++..
T Consensus 3 ~i~l~d~~~-~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 3 SIRLVDPTT-FEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp EEEEEETTT-SSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred EEEEEeCCC-CeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 477888776 334443331 233344443 3322 1456655543 288999999984 3222
Q ss_pred ----EeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCe-EEEEec-CCCCCeEEEEEcCCCCEEEEEeCC-eEEEEEC
Q 002591 746 ----VFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQA-CRLSLQ-GHTKPIDSVCWDPSGELLASVSED-SVRVWTV 818 (903)
Q Consensus 746 ----~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~-~~~~l~-~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl 818 (903)
.+++.+.+++.. +++ ++++.++.|.+|++...+ ....-. .....+.++... +++|+.|..- .|.++.+
T Consensus 82 i~~~~~~g~V~ai~~~--~~~-lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSF--NGR-LVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp EEEEEESS-EEEEEEE--TTE-EEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred EEEEeecCcceEhhhh--CCE-EEEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence 234555555544 566 555556899999988877 433222 123356666655 6688888765 6766655
Q ss_pred CCCCCcceEEEe--ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC-------C--cEE--EEccCCCCEEEE---E
Q 002591 819 GSGSEGECVHEL--SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSE-------N--KTM--TLTAHEGLIAAL---A 882 (903)
Q Consensus 819 ~s~~~~~~i~~~--~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~-------~--~~~--~~~~h~~~V~sl---~ 882 (903)
.... ..+..+ ......++++.|-.+++.++++..+|.|.++.... + +.. ........|+++ +
T Consensus 157 ~~~~--~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~ 234 (321)
T PF03178_consen 157 DEEN--NKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGS 234 (321)
T ss_dssp ETTT--E-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--
T ss_pred EccC--CEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEE
Confidence 4321 212222 22345688888886667999999999999998763 2 222 222345667777 4
Q ss_pred Eec--CCC------EEEEEecCCcEEE
Q 002591 883 VST--ETG------YVASASHDKFVKL 901 (903)
Q Consensus 883 ~sp--dg~------~LaSgs~DG~I~I 901 (903)
+.+ .+. .++.++.+|.|.+
T Consensus 235 l~~~~~~~~~~~~~~i~~~T~~G~Ig~ 261 (321)
T PF03178_consen 235 LIPRSGSSESPNRPQILYGTVDGSIGV 261 (321)
T ss_dssp SS--SSSS-TTEEEEEEEEETTS-EEE
T ss_pred eeecCCCCcccccceEEEEecCCEEEE
Confidence 444 122 4778888998863
No 359
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.013 Score=64.15 Aligned_cols=215 Identities=10% Similarity=0.102 Sum_probs=127.6
Q ss_pred EEECCCCCEEEEE-eCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee-
Q 002591 671 VRFSPSMPRLATS-SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK- 748 (903)
Q Consensus 671 l~fspdg~~Lasg-s~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~- 748 (903)
..|.++...|+-+ -..+.|.-|+..+... +.+. +...+.++.....+..++ ++. ..+++++++++..+..+.
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~--~~~~-~p~~~~~~~~~d~~g~Lv-~~~--~g~~~~~~~~~~~~t~~~~ 103 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKK--RVFP-SPGGFSSGALIDAGGRLI-ACE--HGVRLLDPDTGGKITLLAE 103 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCce--EEEE-CCCCcccceeecCCCeEE-EEc--cccEEEeccCCceeEEecc
Confidence 3466666644444 4477888888875332 3333 233344555444444343 553 457777776665533321
Q ss_pred -------cCceeEEEecCCCEEEEEEc-----------CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC
Q 002591 749 -------GGTAQMRFQPHLGRYLAAAA-----------ENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE 810 (903)
Q Consensus 749 -------~~~~~v~~sp~~~~ll~~s~-----------dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~ 810 (903)
...+...+.|++...+.... -|.|+.+|. .+..+..+..+-..-+.|+|+||++.|+.+..
T Consensus 104 ~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT 182 (307)
T COG3386 104 PEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADT 182 (307)
T ss_pred ccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeC
Confidence 12356778888776665544 134555565 45566656655566678999999987776665
Q ss_pred C--eEEEEECCC--CCCc--ceEEEeecCCCceEEEEEeCCCCEEEEEECCC-eEEEEECCCCcEE-EEccCCCCEEEEE
Q 002591 811 D--SVRVWTVGS--GSEG--ECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ-SLELWNMSENKTM-TLTAHEGLIAALA 882 (903)
Q Consensus 811 d--~I~iwdl~s--~~~~--~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg-~I~vwdl~~~~~~-~~~~h~~~V~sl~ 882 (903)
. .|..|++.. +... .....+....+..-.++...+|.+.+++...| .|.+|+.. ++++ .+.-....+++++
T Consensus 183 ~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~~~ 261 (307)
T COG3386 183 PANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTNPA 261 (307)
T ss_pred CCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCccce
Confidence 4 777777652 2111 11222222345566778888888776555554 99999999 6666 5555558888898
Q ss_pred Ee-cCCCEEEEE
Q 002591 883 VS-TETGYVASA 893 (903)
Q Consensus 883 ~s-pdg~~LaSg 893 (903)
|- ++.+.|+..
T Consensus 262 FgG~~~~~L~iT 273 (307)
T COG3386 262 FGGPDLNTLYIT 273 (307)
T ss_pred EeCCCcCEEEEE
Confidence 84 444544433
No 360
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.67 E-value=0.024 Score=65.43 Aligned_cols=217 Identities=14% Similarity=0.133 Sum_probs=120.9
Q ss_pred eEEEEECCCCCEEEEE-eCCC----cEEEEeCCCCCceeE-EeccCCCceEEEEecCCCCeEEEEEeCC----------C
Q 002591 668 ITDVRFSPSMPRLATS-SFDK----TVRVWDADNPGYSLR-TFMGHSASVMSLDFHPNKDDLICSCDGD----------G 731 (903)
Q Consensus 668 V~~l~fspdg~~Lasg-s~Dg----~I~IWDl~~~~~~~~-~~~~h~~~V~sl~fsp~~~~ll~sgs~D----------g 731 (903)
+..++++|++++||.+ +..| .|+|+|+++ ++.+. .+... ....+.|.+++..++++...+ .
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~t-g~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLET-GKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTT-TEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCC-CcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 4468899999988766 3344 499999998 44433 22221 122399999988888776443 2
Q ss_pred cEEEEEcCCCee--eEEeec--C---ceeEEEecCCCEEEEEEc---C-CeEEEEECCCC----eEEEEecCCCCCeE-E
Q 002591 732 EIRYWSINNGSC--TRVFKG--G---TAQMRFQPHLGRYLAAAA---E-NVVSILDAETQ----ACRLSLQGHTKPID-S 795 (903)
Q Consensus 732 ~I~iwDi~t~~~--~~~~~~--~---~~~v~~sp~~~~ll~~s~---d-g~I~i~D~~t~----~~~~~l~~h~~~V~-s 795 (903)
.|++|++.+... ..+|.. . ...+..+.++.++++... + ..|++.|+..+ .....+......+. .
T Consensus 203 ~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~ 282 (414)
T PF02897_consen 203 QVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYY 282 (414)
T ss_dssp EEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEE
T ss_pred EEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEE
Confidence 378888877643 244433 2 335778889888777554 2 46888898874 22223333333443 3
Q ss_pred EEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC---eEEEEECC-CCc
Q 002591 796 VCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---SLELWNMS-ENK 867 (903)
Q Consensus 796 l~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---~I~vwdl~-~~~ 867 (903)
+... .+.+++....+ .|...++...........+..+...+.-..+...+.+|++...++ .|++|++. +..
T Consensus 283 v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~~ 361 (414)
T PF02897_consen 283 VDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGKE 361 (414)
T ss_dssp EEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TEE
T ss_pred EEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCcE
Confidence 4333 44444444443 566677776543222334444444333333444555666655443 79999999 555
Q ss_pred EEEEcc-CCCCEEEEEEecCCC
Q 002591 868 TMTLTA-HEGLIAALAVSTETG 888 (903)
Q Consensus 868 ~~~~~~-h~~~V~sl~~spdg~ 888 (903)
...+.. -.+.|..+...+++.
T Consensus 362 ~~~~~~p~~g~v~~~~~~~~~~ 383 (414)
T PF02897_consen 362 SREIPLPEAGSVSGVSGDFDSD 383 (414)
T ss_dssp EEEEESSSSSEEEEEES-TT-S
T ss_pred EeeecCCcceEEeccCCCCCCC
Confidence 444333 334456655555544
No 361
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.66 E-value=0.015 Score=64.68 Aligned_cols=211 Identities=12% Similarity=0.146 Sum_probs=123.6
Q ss_pred cEEEEECCCCceeEEeccC-CCCeEE---EEECCC----CCEEEEEeC----------CCcEEEEeCCCC---CceeEE-
Q 002591 646 KAVLWHTDTLKSKTNLEEH-SSLITD---VRFSPS----MPRLATSSF----------DKTVRVWDADNP---GYSLRT- 703 (903)
Q Consensus 646 ~V~vWd~~t~~~~~~l~~h-~~~V~~---l~fspd----g~~Lasgs~----------Dg~I~IWDl~~~---~~~~~~- 703 (903)
.|+|.|..+.+.+.++.-. ...|++ +.|..+ ..+|++|.. .|.|.++++.+. ...++.
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 5888888887777665522 223443 444433 457777743 288999999873 112222
Q ss_pred -eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEE--eecCceeEEEecCCCEEEEEEcCCeEEEE--EC
Q 002591 704 -FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRV--FKGGTAQMRFQPHLGRYLAAAAENVVSIL--DA 777 (903)
Q Consensus 704 -~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~--~~~~~~~v~~sp~~~~ll~~s~dg~I~i~--D~ 777 (903)
-....++|++|+-. +++++++. ++.|++|++...+ .... +......++....+++++++.....|.++ +.
T Consensus 83 ~~~~~~g~V~ai~~~--~~~lv~~~--g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~ 158 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF--NGRLVVAV--GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDE 158 (321)
T ss_dssp EEEEESS-EEEEEEE--TTEEEEEE--TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEET
T ss_pred EEEeecCcceEhhhh--CCEEEEee--cCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEc
Confidence 23457889999877 34455333 5899999998887 4443 33455566666667899999988877776 44
Q ss_pred CCCeEEEE-ecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC-----C---CcceEEEeecCCCceEEE---EEeC
Q 002591 778 ETQACRLS-LQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG-----S---EGECVHELSCNGNKFHSC---VFHP 844 (903)
Q Consensus 778 ~t~~~~~~-l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~-----~---~~~~i~~~~~~~~~i~si---~~sp 844 (903)
...+.... -......+++++|-.+++.++++..+ .|.++..... . ....+..+.. +..|+++ .+.+
T Consensus 159 ~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~l-g~~v~~~~~~~l~~ 237 (321)
T PF03178_consen 159 ENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHL-GDIVNSFRRGSLIP 237 (321)
T ss_dssp TTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE--SS-EEEEEE--SS-
T ss_pred cCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEEC-CCccceEEEEEeee
Confidence 32222221 12245678899998666777777777 8888887631 1 1122233332 4556666 4444
Q ss_pred --CCC------EEEEEECCCeEEEE
Q 002591 845 --TYP------SLLVIGCYQSLELW 861 (903)
Q Consensus 845 --~g~------~l~t~s~dg~I~vw 861 (903)
.+. .++.++.+|.|.+.
T Consensus 238 ~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 238 RSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp -SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred cCCCCcccccceEEEEecCCEEEEE
Confidence 222 38888888888743
No 362
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.65 E-value=0.0087 Score=66.32 Aligned_cols=240 Identities=13% Similarity=0.111 Sum_probs=118.0
Q ss_pred ECCCCceeEEeccCCCCeE-----EEEECCCCCEEEEEeC-CCc--EEEEeCCCCCceeEEeccCC-CceEEEEecCCCC
Q 002591 651 HTDTLKSKTNLEEHSSLIT-----DVRFSPSMPRLATSSF-DKT--VRVWDADNPGYSLRTFMGHS-ASVMSLDFHPNKD 721 (903)
Q Consensus 651 d~~t~~~~~~l~~h~~~V~-----~l~fspdg~~Lasgs~-Dg~--I~IWDl~~~~~~~~~~~~h~-~~V~sl~fsp~~~ 721 (903)
|..||..+..+..+..... .=+|..||+.|+.++. ||. +.+.|+.+ ..+..++... .......++++++
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t--~~i~QLTdg~g~~~~g~~~s~~~~ 93 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLAT--GEITQLTDGPGDNTFGGFLSPDDR 93 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT---EEEE---SS-B-TTT-EE-TTSS
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEccc--CEEEECccCCCCCccceEEecCCC
Confidence 5667777777765443333 3356788987666654 554 55667765 3455555433 2233566778877
Q ss_pred eEEEEEeCCCcEEEEEcCCCeeeEEeecC--ce-eEEEe-cCCCEEEEEEc-----------------------CCeEEE
Q 002591 722 DLICSCDGDGEIRYWSINNGSCTRVFKGG--TA-QMRFQ-PHLGRYLAAAA-----------------------ENVVSI 774 (903)
Q Consensus 722 ~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~--~~-~v~~s-p~~~~ll~~s~-----------------------dg~I~i 774 (903)
.+++.. .+..|+..|+++.+....+..+ .. ...|. ..+...+++.. ...|..
T Consensus 94 ~~~Yv~-~~~~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~ 172 (386)
T PF14583_consen 94 ALYYVK-NGRSLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFT 172 (386)
T ss_dssp EEEEEE-TTTEEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEE
T ss_pred eEEEEE-CCCeEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEE
Confidence 666543 4568899999998765555432 22 23443 22333343322 235667
Q ss_pred EECCCCeEEEEecCCCCCeEEEEEcCCCC-EEEEEeCC---e--EEEEECCCCCC-cceEEEeecCCCceEEEEEeCCCC
Q 002591 775 LDAETQACRLSLQGHTKPIDSVCWDPSGE-LLASVSED---S--VRVWTVGSGSE-GECVHELSCNGNKFHSCVFHPTYP 847 (903)
Q Consensus 775 ~D~~t~~~~~~l~~h~~~V~sl~~spdg~-~lasgs~d---~--I~iwdl~s~~~-~~~i~~~~~~~~~i~si~~sp~g~ 847 (903)
.|+.+++....+. ...++..+-|+|... +|+-|-++ . -|||-+++... .+.++... ....+..=-|.++|.
T Consensus 173 idl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~-~~e~~gHEfw~~DG~ 250 (386)
T PF14583_consen 173 IDLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRM-EGESVGHEFWVPDGS 250 (386)
T ss_dssp EETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS----TTEEEEEEEE-TTSS
T ss_pred EECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCC-CCcccccccccCCCC
Confidence 7888887665555 567788999999655 55555554 3 38888875422 22222211 122344445899998
Q ss_pred EEEEEEC-----CCeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 848 SLLVIGC-----YQSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 848 ~l~t~s~-----dg~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
.|..-+. +..|.-+|+.+++...+..- .....+-.++||++++-=+.|
T Consensus 251 ~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~~-p~~~H~~ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 251 TIWYDSYTPGGQDFWIAGYDPDTGERRRLMEM-PWCSHFMSSPDGKLFVGDGGD 303 (386)
T ss_dssp -EEEEEEETTT--EEEEEE-TTT--EEEEEEE--SEEEEEE-TTSSEEEEEE--
T ss_pred EEEEEeecCCCCceEEEeeCCCCCCceEEEeC-CceeeeEEcCCCCEEEecCCC
Confidence 8766443 33677788888765533222 234456667899887764444
No 363
>PRK10115 protease 2; Provisional
Probab=97.63 E-value=0.099 Score=64.11 Aligned_cols=237 Identities=8% Similarity=0.002 Sum_probs=122.7
Q ss_pred CeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCC------CcEEEEe
Q 002591 625 KVICCHFSSDGKLLATGGHD-----KKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFD------KTVRVWD 693 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~D-----g~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~D------g~I~IWD 693 (903)
.+..+.|+|||++||.+... ..|++.|+.+++.+........ ..++|.+|++.|+.+..+ ..|++|+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 46678899999988876432 3588999988764333222222 459999999876665442 3688888
Q ss_pred CCCCC-ceeEEeccCCCceE-EEEecCCCCeEEEEEeC--CCcEEEEEcC--CCeeeEEeec-CceeEEEecCCCEEEEE
Q 002591 694 ADNPG-YSLRTFMGHSASVM-SLDFHPNKDDLICSCDG--DGEIRYWSIN--NGSCTRVFKG-GTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 694 l~~~~-~~~~~~~~h~~~V~-sl~fsp~~~~ll~sgs~--Dg~I~iwDi~--t~~~~~~~~~-~~~~v~~sp~~~~ll~~ 766 (903)
+.++. .....+........ .+..+.++..+++.+.. ++.+.+|+.. .+.....+.. ......+...++.++..
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~ 285 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLR 285 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEE
Confidence 88742 22333433333333 33334466766644433 4678999853 3332222221 11112222333444444
Q ss_pred EcC----CeEEEEECCC-CeEEEEecCC-C-CCeEEEEEcCCCCEEEEEeCC---eEEEEECCCCCCcceEEEee-cCCC
Q 002591 767 AAE----NVVSILDAET-QACRLSLQGH-T-KPIDSVCWDPSGELLASVSED---SVRVWTVGSGSEGECVHELS-CNGN 835 (903)
Q Consensus 767 s~d----g~I~i~D~~t-~~~~~~l~~h-~-~~V~sl~~spdg~~lasgs~d---~I~iwdl~s~~~~~~i~~~~-~~~~ 835 (903)
+.. ..|...++.. ++.. .+..+ . ..|..+.+.. +.++++...+ .+++++.... .+..+. ....
T Consensus 286 tn~~~~~~~l~~~~~~~~~~~~-~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~~~~~~~~----~~~~l~~~~~~ 359 (686)
T PRK10115 286 SNRHGKNFGLYRTRVRDEQQWE-ELIPPRENIMLEGFTLFT-DWLVVEERQRGLTSLRQINRKTR----EVIGIAFDDPA 359 (686)
T ss_pred EcCCCCCceEEEecCCCcccCe-EEECCCCCCEEEEEEEEC-CEEEEEEEeCCEEEEEEEcCCCC----ceEEecCCCCc
Confidence 432 2444455552 2222 23333 3 3677888872 3455555544 4666665432 222222 1122
Q ss_pred ceEEEEEe--CCCC-EEEEEECC---CeEEEEECCCCcEE
Q 002591 836 KFHSCVFH--PTYP-SLLVIGCY---QSLELWNMSENKTM 869 (903)
Q Consensus 836 ~i~si~~s--p~g~-~l~t~s~d---g~I~vwdl~~~~~~ 869 (903)
.+..+.++ +++. .+++.++. +.|+.||+.+++..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~~~ 399 (686)
T PRK10115 360 YVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGERR 399 (686)
T ss_pred eEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCcEE
Confidence 23333344 3444 33333332 58999999877644
No 364
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.57 E-value=0.019 Score=65.93 Aligned_cols=188 Identities=9% Similarity=0.122 Sum_probs=98.4
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee-----cCceeEE----Eec
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK-----GGTAQMR----FQP 758 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~-----~~~~~v~----~sp 758 (903)
.|+||+.. +..+..+.-..+.|.++.|..+ ..++ +-..||.+++||+.... ...+. ..+.... +..
T Consensus 62 ~I~iys~s--G~ll~~i~w~~~~iv~~~wt~~-e~Lv-vV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~ 136 (410)
T PF04841_consen 62 SIQIYSSS--GKLLSSIPWDSGRIVGMGWTDD-EELV-VVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFY 136 (410)
T ss_pred EEEEECCC--CCEeEEEEECCCCEEEEEECCC-CeEE-EEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccC
Confidence 47788776 3445444433378999999875 4455 55679999999987333 11111 1111111 122
Q ss_pred CCCEEEEEEcCCeEEEEECCCCe-EEEEe---cCCCC------CeE-EEEEcCCCCEEEEEeCC-eEEEEECCCCCCcce
Q 002591 759 HLGRYLAAAAENVVSILDAETQA-CRLSL---QGHTK------PID-SVCWDPSGELLASVSED-SVRVWTVGSGSEGEC 826 (903)
Q Consensus 759 ~~~~ll~~s~dg~I~i~D~~t~~-~~~~l---~~h~~------~V~-sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~ 826 (903)
..+ +++-..++.|++..--... ....+ ..... .+. ...++.+....+....+ .+.+.+-...
T Consensus 137 ~~G-ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~----- 210 (410)
T PF04841_consen 137 KNG-IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSF----- 210 (410)
T ss_pred CCC-EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccc-----
Confidence 234 3333445555554332221 11111 11000 000 02234444444444443 5553433211
Q ss_pred EEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEcc-CCCCEEEEEEecCCC
Q 002591 827 VHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTA-HEGLIAALAVSTETG 888 (903)
Q Consensus 827 i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~-h~~~V~sl~~spdg~ 888 (903)
..+. ..+++..++++|++++|+.-..+|.+.|....-.+.. .+.. -......+.|.-+..
T Consensus 211 -~~i~-~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~da 272 (410)
T PF04841_consen 211 -KQID-SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDA 272 (410)
T ss_pred -cccc-CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCc
Confidence 0011 2468999999999999999999999999877655554 2222 234566677765443
No 365
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.57 E-value=0.00085 Score=76.07 Aligned_cols=221 Identities=15% Similarity=0.122 Sum_probs=114.0
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEe--cc------CCCCeEEEEECC-----CC-
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNL--EE------HSSLITDVRFSP-----SM- 677 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l--~~------h~~~V~~l~fsp-----dg- 677 (903)
.|.+...++...++|++++.|.-| ++|.|..+|.+.|.|++....+..- .. ....|+++.|.- |+
T Consensus 75 gf~P~~l~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~y 153 (395)
T PF08596_consen 75 GFLPLTLLDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGY 153 (395)
T ss_dssp EEEEEEEE---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSS
T ss_pred ccCchhheeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcc
Confidence 478888888889999999998655 9999999999999999876666552 22 345688898852 32
Q ss_pred --CEEEEEeCCCcEEEEeCCC-C-CceeEEec----cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec
Q 002591 678 --PRLATSSFDKTVRVWDADN-P-GYSLRTFM----GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG 749 (903)
Q Consensus 678 --~~Lasgs~Dg~I~IWDl~~-~-~~~~~~~~----~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~ 749 (903)
-+|++|...|.+.+|.+.- . +.-...+. .+.+.|.. |..+|..+++.......
T Consensus 154 SSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~-------------------I~~i~~~~G~~a~At~~ 214 (395)
T PF08596_consen 154 SSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILS-------------------IIPINADTGESALATIS 214 (395)
T ss_dssp EEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----E-------------------EEEEETTT--B-B-BHH
T ss_pred cceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEE-------------------EEEEECCCCCcccCchh
Confidence 3688888889999997741 1 11000010 11122221 22334444432111100
Q ss_pred CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEc-----CCCCEEEEEeCC-eEEEEECCCCCC
Q 002591 750 GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWD-----PSGELLASVSED-SVRVWTVGSGSE 823 (903)
Q Consensus 750 ~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~s-----pdg~~lasgs~d-~I~iwdl~s~~~ 823 (903)
....+.-...-..+++.+.+..|+++...+.+..++.......+..+++- ..+..|++-..+ .|++|.+-..
T Consensus 215 ~~~~l~~g~~i~g~vVvvSe~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~L-- 292 (395)
T PF08596_consen 215 AMQGLSKGISIPGYVVVVSESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSL-- 292 (395)
T ss_dssp HHHGGGGT----EEEEEE-SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT---
T ss_pred HhhccccCCCcCcEEEEEcccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCc--
Confidence 00000000011346677778999999999888777665332334445553 245567777777 9999999765
Q ss_pred cceEEEeecC----CCceEEEEEeCCCCEEEEEECC
Q 002591 824 GECVHELSCN----GNKFHSCVFHPTYPSLLVIGCY 855 (903)
Q Consensus 824 ~~~i~~~~~~----~~~i~si~~sp~g~~l~t~s~d 855 (903)
+.+..+... ...+..+.++++|..++..+..
T Consensus 293 -kei~~~~l~~~~d~~~~~~ssis~~Gdi~~~~gps 327 (395)
T PF08596_consen 293 -KEIKSVSLPPPLDSRRLSSSSISRNGDIFYWTGPS 327 (395)
T ss_dssp --EEEEEE-SS---HHHHTT-EE-TTS-EEEE-SSS
T ss_pred -hHhhcccCCCccccccccccEECCCCCEEEEeCcc
Confidence 334333331 1234556778888876666544
No 366
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.54 E-value=0.013 Score=71.20 Aligned_cols=207 Identities=9% Similarity=0.112 Sum_probs=125.5
Q ss_pred eCCCcEEEEeCCCCCceeEEeccCCCc-eEEEEecC-----CCCeEEEEEeCCCcEEEEEcCCCe--eeE----EeecC-
Q 002591 684 SFDKTVRVWDADNPGYSLRTFMGHSAS-VMSLDFHP-----NKDDLICSCDGDGEIRYWSINNGS--CTR----VFKGG- 750 (903)
Q Consensus 684 s~Dg~I~IWDl~~~~~~~~~~~~h~~~-V~sl~fsp-----~~~~ll~sgs~Dg~I~iwDi~t~~--~~~----~~~~~- 750 (903)
.....|+-.|++. ++++..+..|... |..++-.. .....+ .|-.+..|+.||.|-.. ++. .+...
T Consensus 501 ~~~~~ly~mDLe~-GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tf-lGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~ 578 (794)
T PF08553_consen 501 NNPNKLYKMDLER-GKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTF-LGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKN 578 (794)
T ss_pred CCCCceEEEecCC-CcEEEEeecCCCcceeEecccccccccCCCceE-EEECCCceEEeccCCCCCceeeccccccccCC
Confidence 3467899999998 8889998877654 55543221 122233 67778999999998643 331 12111
Q ss_pred ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECC--CCC------
Q 002591 751 TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVG--SGS------ 822 (903)
Q Consensus 751 ~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~--s~~------ 822 (903)
...+......++|++|+.+|.|++||-...+....+.+-..+|..|+.+.||++|++.|...|.+++.. .+.
T Consensus 579 ~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~tyLlLi~t~~~~g~~~g~~G 658 (794)
T PF08553_consen 579 NFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKTYLLLIDTLIKDGKNSGKLG 658 (794)
T ss_pred CceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecceEEEEEEeeecCCccCccc
Confidence 122223445589999999999999995433444445667899999999999999998888888888753 110
Q ss_pred ---------C--cceEEEee----------cCCCceEEEEEeC---CCCEEEEEECCCeEEEEECCC---C--cEEEEcc
Q 002591 823 ---------E--GECVHELS----------CNGNKFHSCVFHP---TYPSLLVIGCYQSLELWNMSE---N--KTMTLTA 873 (903)
Q Consensus 823 ---------~--~~~i~~~~----------~~~~~i~si~~sp---~g~~l~t~s~dg~I~vwdl~~---~--~~~~~~~ 873 (903)
. ...+..-. .....++...|+. .....++++....+.+|++.. + .+..+..
T Consensus 659 F~~~~~~~~kp~Pr~L~L~pe~~~~~~~~~~~~~~Ft~a~Fnt~~~~~E~~IvtstG~f~v~Wnf~kV~~g~~~~Y~ikr 738 (794)
T PF08553_consen 659 FEKSFGKDKKPQPRRLQLKPEHVAYMQHETGKPISFTPAKFNTGIGKQETSIVTSTGPFVVTWNFKKVKRGKKDPYQIKR 738 (794)
T ss_pred cccccCccCCCCCeEEecCHHHHHHHHhccCCCceeeceEEecCCCCccceEEEeccCEEEEEEHHHHhCCCCCceEEEE
Confidence 0 01111100 1112234445542 124466667778999999853 2 2334444
Q ss_pred CCCCEEEE--EEecCCCEEEE
Q 002591 874 HEGLIAAL--AVSTETGYVAS 892 (903)
Q Consensus 874 h~~~V~sl--~~spdg~~LaS 892 (903)
....|.+- .|..+.+.|++
T Consensus 739 y~~~V~~dnF~fg~d~~viva 759 (794)
T PF08553_consen 739 YDENVVADNFKFGSDKNVIVA 759 (794)
T ss_pred cCCceEEccceeCCCCcEEEE
Confidence 44555554 44445444443
No 367
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.50 E-value=0.00037 Score=79.34 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=80.9
Q ss_pred ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeE-EEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 620 RASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLIT-DVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 620 ~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~-~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
+.-.-.|.-+.|+|.-.+||++..+|.|.+..+. ...+.++..|...|+ +++|.|||+.||+|-.||+|++.|++++.
T Consensus 17 ~~l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 17 MSLPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred hccccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 3345578899999999999999999999999988 788889988888888 99999999999999999999999999854
Q ss_pred ceeEEeccCCCceEEEEecC
Q 002591 699 YSLRTFMGHSASVMSLDFHP 718 (903)
Q Consensus 699 ~~~~~~~~h~~~V~sl~fsp 718 (903)
............|.++.|.+
T Consensus 96 ~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 96 RLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred ceeccccccccchheeeccc
Confidence 43333333456677777763
No 368
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.43 E-value=0.095 Score=62.20 Aligned_cols=146 Identities=12% Similarity=0.082 Sum_probs=85.6
Q ss_pred CEEEEEeCCCcEEEEECCCCceeEEeccC--C--CCeEEEEECCCCCEEEEEe------CCCcEEEEeCCCCCceeEEec
Q 002591 636 KLLATGGHDKKAVLWHTDTLKSKTNLEEH--S--SLITDVRFSPSMPRLATSS------FDKTVRVWDADNPGYSLRTFM 705 (903)
Q Consensus 636 ~~Latgs~Dg~V~vWd~~t~~~~~~l~~h--~--~~V~~l~fspdg~~Lasgs------~Dg~I~IWDl~~~~~~~~~~~ 705 (903)
..|+.++.|+.|.-+|.++++.+-..... . ..+++--.--++ .|+++. .+|.|+.+|.++ ++.+-.+.
T Consensus 121 ~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~T-G~~lW~~~ 198 (527)
T TIGR03075 121 GKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKT-GKLVWRRY 198 (527)
T ss_pred CEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCC-CceeEecc
Confidence 46777888999999999999988776532 1 111110000133 444443 268899999987 44443322
Q ss_pred cC-------------------------------CCceE-EEEecCCCCeEEEEEeC----CC-----------cEEEEEc
Q 002591 706 GH-------------------------------SASVM-SLDFHPNKDDLICSCDG----DG-----------EIRYWSI 738 (903)
Q Consensus 706 ~h-------------------------------~~~V~-sl~fsp~~~~ll~sgs~----Dg-----------~I~iwDi 738 (903)
.- ...|+ .+.+.+..+.+++-.+. ++ .|.-.|+
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~ 278 (527)
T TIGR03075 199 TVPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDP 278 (527)
T ss_pred CcCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEcc
Confidence 11 01121 23566654434332222 12 6778899
Q ss_pred CCCeeeEEeecC----------cee--EEEecCCC---EEEEEEcCCeEEEEECCCCeEE
Q 002591 739 NNGSCTRVFKGG----------TAQ--MRFQPHLG---RYLAAAAENVVSILDAETQACR 783 (903)
Q Consensus 739 ~t~~~~~~~~~~----------~~~--v~~sp~~~---~ll~~s~dg~I~i~D~~t~~~~ 783 (903)
++++.+-.|..- ... +.+..+++ .++.+..+|.++++|.++++.+
T Consensus 279 ~TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 279 DTGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred ccCCEEEeeeCCCCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 999988776531 111 22224554 4567778999999999999886
No 369
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=97.35 E-value=0.25 Score=56.29 Aligned_cols=260 Identities=14% Similarity=0.146 Sum_probs=144.7
Q ss_pred CCEEEEEeCCCcEEEEECCCCce----eEEeccCCCCeEEEEECC----CCCEEEEEeCCCcEEEEeCCCCC--------
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKS----KTNLEEHSSLITDVRFSP----SMPRLATSSFDKTVRVWDADNPG-------- 698 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~----~~~l~~h~~~V~~l~fsp----dg~~Lasgs~Dg~I~IWDl~~~~-------- 698 (903)
...|++|+..|.++||+...... +..-..-..+|..|..-. .....++.=.-..+.||.+....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~ 116 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQ 116 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcE
Confidence 35899999999999999753221 111123456777777532 22233333557778888873211
Q ss_pred ceeEEeccCC--CceEEEEecCC----CCeEEEEEeCCCcEEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEcCC
Q 002591 699 YSLRTFMGHS--ASVMSLDFHPN----KDDLICSCDGDGEIRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAAEN 770 (903)
Q Consensus 699 ~~~~~~~~h~--~~V~sl~fsp~----~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~dg 770 (903)
..+.....|. .....+++-|- ++.+||+-+.||.+.+|+-+.....+.+.. -...++|.+..+.|++++++.
T Consensus 117 ~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~~llPgPl~Y~~~tDsfvt~sss~ 196 (418)
T PF14727_consen 117 YQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPDFLLPGPLCYCPRTDSFVTASSSW 196 (418)
T ss_pred EEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCCCCCCcCeEEeecCCEEEEecCce
Confidence 1233333343 23334444332 357889999999999999877665555544 245688999999999999998
Q ss_pred eEEEEECCC--------------------Ce---EEEEecCCCCCeEE---EEEcCCCCEEEEEeCCeEEEEECCCCCCc
Q 002591 771 VVSILDAET--------------------QA---CRLSLQGHTKPIDS---VCWDPSGELLASVSEDSVRVWTVGSGSEG 824 (903)
Q Consensus 771 ~I~i~D~~t--------------------~~---~~~~l~~h~~~V~s---l~~spdg~~lasgs~d~I~iwdl~s~~~~ 824 (903)
.|..|.... ++ +-.++. -...+.. +.++.....|++-++.++.+.+-. | ..
T Consensus 197 ~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~n-lGE~~l~i~v~~~~~~~~~IvvLger~Lf~l~~~-G-~l 273 (418)
T PF14727_consen 197 TLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFN-LGEQALDIQVVRFSSSESDIVVLGERSLFCLKDN-G-SL 273 (418)
T ss_pred eEEEecHHHhhhccccccccccccccccccccccceeEEE-CCceeEEEEEEEcCCCCceEEEEecceEEEEcCC-C-eE
Confidence 888885321 00 011111 1122223 333333445666666666666653 2 23
Q ss_pred ceEEEeecCCCceEEEEEeC----CC---CEEEEEECCCeEEEEECCCCcEEEEccCCCCEEEEEE---ecCCCEEEEEe
Q 002591 825 ECVHELSCNGNKFHSCVFHP----TY---PSLLVIGCYQSLELWNMSENKTMTLTAHEGLIAALAV---STETGYVASAS 894 (903)
Q Consensus 825 ~~i~~~~~~~~~i~si~~sp----~g---~~l~t~s~dg~I~vwdl~~~~~~~~~~h~~~V~sl~~---spdg~~LaSgs 894 (903)
+..+.+.. .+...+.|.- ++ ..+++++.++.+.||.=.+ ++.-........++.. ..-...|++-+
T Consensus 274 ~~~krLd~--~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~d~~--L~WsA~l~~~PVal~v~~~~~~~G~IV~Ls 349 (418)
T PF14727_consen 274 RFQKRLDY--NPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYEDTT--LVWSAQLPHVPVALSVANFNGLKGLIVSLS 349 (418)
T ss_pred EEEEecCC--ceeeEEEEEeecccCCCCceEEEEEecCCeEEEEeCCe--EEEecCCCCCCEEEEecccCCCCceEEEEc
Confidence 33333322 2222222221 22 2488999999999986332 2211111222223332 23345788888
Q ss_pred cCCcEEE
Q 002591 895 HDKFVKL 901 (903)
Q Consensus 895 ~DG~I~I 901 (903)
.+|.|.+
T Consensus 350 ~~G~L~v 356 (418)
T PF14727_consen 350 DEGQLSV 356 (418)
T ss_pred CCCcEEE
Confidence 8888865
No 370
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.30 E-value=0.07 Score=59.77 Aligned_cols=219 Identities=11% Similarity=0.110 Sum_probs=106.5
Q ss_pred CCCEEEEEe-CCCcEEEEECCC----CceeEEecc---CC----CCeEEEEECCCCCEEEEEeC------CCcEEEEeCC
Q 002591 634 DGKLLATGG-HDKKAVLWHTDT----LKSKTNLEE---HS----SLITDVRFSPSMPRLATSSF------DKTVRVWDAD 695 (903)
Q Consensus 634 dg~~Latgs-~Dg~V~vWd~~t----~~~~~~l~~---h~----~~V~~l~fspdg~~Lasgs~------Dg~I~IWDl~ 695 (903)
+.++|+..+ ..+.|+|+|+.+ .+..++++. +. ..-..+..-|+|..++++-. -|.+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 456777766 678999999873 344555542 11 12233444578988887622 2457788877
Q ss_pred CCCceeEEeccC---CCceEEEEecCCCCeEEEEEe--------------------CCCcEEEEEcCCCeeeEEeecC--
Q 002591 696 NPGYSLRTFMGH---SASVMSLDFHPNKDDLICSCD--------------------GDGEIRYWSINNGSCTRVFKGG-- 750 (903)
Q Consensus 696 ~~~~~~~~~~~h---~~~V~sl~fsp~~~~ll~sgs--------------------~Dg~I~iwDi~t~~~~~~~~~~-- 750 (903)
+ ......+... ...-+.+-|.|..+.+| |.. ...++.+||+.+.+.+.++.-+
T Consensus 166 t-f~v~g~We~~~~~~~~gYDfw~qpr~nvMi-SSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~ 243 (461)
T PF05694_consen 166 T-FEVKGRWEKDRGPQPFGYDFWYQPRHNVMI-SSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEE 243 (461)
T ss_dssp T---EEEE--SB-TT------EEEETTTTEEE-E-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TT
T ss_pred c-ccccceeccCCCCCCCCCCeEEcCCCCEEE-EeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCC
Confidence 5 3444444432 33456788888766444 542 2467999999999999988754
Q ss_pred ---ceeEEEe--cCCCEEEEEE-cCCeEEEE-ECCCC----eEEEEecCC-----------------CCCeEEEEEcCCC
Q 002591 751 ---TAQMRFQ--PHLGRYLAAA-AENVVSIL-DAETQ----ACRLSLQGH-----------------TKPIDSVCWDPSG 802 (903)
Q Consensus 751 ---~~~v~~s--p~~~~ll~~s-~dg~I~i~-D~~t~----~~~~~l~~h-----------------~~~V~sl~~spdg 802 (903)
...++|. |+..+-++++ -...|..| ..+.+ +.+..+... ..-|+.|.++.|.
T Consensus 244 g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDD 323 (461)
T PF05694_consen 244 GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDD 323 (461)
T ss_dssp EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS
T ss_pred CCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCC
Confidence 2345654 4444444433 34555554 33444 223333211 2447899999999
Q ss_pred CEEEEEeCC--eEEEEECCCCCCcceEEEeecCC----------------CceEEEEEeCCCCEEEEEEC
Q 002591 803 ELLASVSED--SVRVWTVGSGSEGECVHELSCNG----------------NKFHSCVFHPTYPSLLVIGC 854 (903)
Q Consensus 803 ~~lasgs~d--~I~iwdl~s~~~~~~i~~~~~~~----------------~~i~si~~sp~g~~l~t~s~ 854 (903)
++|+.++-- .|+.||+......+.+..+...+ +....+..|.||+.|++..+
T Consensus 324 rfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTnS 393 (461)
T PF05694_consen 324 RFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTNS 393 (461)
T ss_dssp -EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE--
T ss_pred CEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEee
Confidence 988888765 89999999877766665443211 12356778899999888753
No 371
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.28 E-value=0.0053 Score=68.87 Aligned_cols=127 Identities=13% Similarity=0.132 Sum_probs=90.5
Q ss_pred EEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCC--------EEEEEeCCeEEEEECCCCCCcceEEEeecC----
Q 002591 766 AAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGE--------LLASVSEDSVRVWTVGSGSEGECVHELSCN---- 833 (903)
Q Consensus 766 ~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~--------~lasgs~d~I~iwdl~s~~~~~~i~~~~~~---- 833 (903)
+.....++-.|++.|+.+.++.-+.. |+-+.+.|+.+ .|+..+...|.-||.+-.... .+.....|
T Consensus 352 ~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~-kl~~~q~kqy~~ 429 (644)
T KOG2395|consen 352 GGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKN-KLAVVQSKQYST 429 (644)
T ss_pred CCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcc-eeeeeecccccc
Confidence 34457899999999999999987766 77778888654 344444448999999854321 22222221
Q ss_pred CCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 834 GNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 834 ~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
...+.|++-..+| +|++|+.+|.|++||- .++.. .+++...+|..|..+.+|++|+..|..
T Consensus 430 k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t 492 (644)
T KOG2395|consen 430 KNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCKT 492 (644)
T ss_pred ccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEeccc
Confidence 3345555555554 7999999999999997 44333 678889999999999999998876644
No 372
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.28 E-value=0.02 Score=68.39 Aligned_cols=210 Identities=16% Similarity=0.173 Sum_probs=113.1
Q ss_pred CCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEe------CCC--cEEEEeCCCCCceeEEeccCCCceEEEE
Q 002591 644 DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSS------FDK--TVRVWDADNPGYSLRTFMGHSASVMSLD 715 (903)
Q Consensus 644 Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs------~Dg--~I~IWDl~~~~~~~~~~~~h~~~V~sl~ 715 (903)
+|.+.-.+-.....+.-..+....+...+++|+|+.++... .|. .|.+++.. +.......+. ..+.-.
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g--g~~~~lt~g~--~~t~Ps 403 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG--GVAVQVLEGH--SLTRPS 403 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC--CcceeeecCC--CCCCce
Confidence 55554443222222222223334688999999999887765 244 44444543 3332223332 377889
Q ss_pred ecCCCCeEEEEEe-----------CCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEE---EECCCCe
Q 002591 716 FHPNKDDLICSCD-----------GDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSI---LDAETQA 781 (903)
Q Consensus 716 fsp~~~~ll~sgs-----------~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i---~D~~t~~ 781 (903)
|+|++..+.+... ..+.+.+.+++.+.....+.+.+..+.|+|++.+++... ++.|++ .....+.
T Consensus 404 WspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 404 WSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVASRVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ 482 (591)
T ss_pred ECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhhccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc
Confidence 9999775543322 223455556655544335566799999999999988876 477777 4544454
Q ss_pred EEE----Eec-CCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC
Q 002591 782 CRL----SLQ-GHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ 856 (903)
Q Consensus 782 ~~~----~l~-~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg 856 (903)
... .+. +-...+.++.|..++.+++........+|.+.-.........-......+..++-.+. .|++...++
T Consensus 483 ~~l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g 560 (591)
T PRK13616 483 YALTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARA 560 (591)
T ss_pred eeecccEEeecccCCccccceEecCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCc
Confidence 111 122 2333468899999998664433223334443322111111011111344556665542 466666666
Q ss_pred eEEE
Q 002591 857 SLEL 860 (903)
Q Consensus 857 ~I~v 860 (903)
.+.+
T Consensus 561 ~~~l 564 (591)
T PRK13616 561 VLQL 564 (591)
T ss_pred eEEe
Confidence 4433
No 373
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.19 E-value=0.33 Score=58.82 Aligned_cols=271 Identities=15% Similarity=0.129 Sum_probs=155.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCceeEEe--ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCC
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHT--DTLKSKTNL--EEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPG 698 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~--~t~~~~~~l--~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~ 698 (903)
...|.-.+|-.|..+|.++..||.+.-|-+ .++..-..- .-...++.--.|+..++.-+.++.|.-..+|.-+. .
T Consensus 583 PRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~-k 661 (1096)
T KOG1897|consen 583 PRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNG-K 661 (1096)
T ss_pred chheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCC-c
Confidence 345666777777889999999999876654 444332222 23455677777877766655666677777776653 2
Q ss_pred ceeEEeccCCCceEEEE-ecC-CCCeEEEEEeCCCcEEEEEcCCCe--eeEEe--ecCceeEEEecCCCEEEEEEc----
Q 002591 699 YSLRTFMGHSASVMSLD-FHP-NKDDLICSCDGDGEIRYWSINNGS--CTRVF--KGGTAQMRFQPHLGRYLAAAA---- 768 (903)
Q Consensus 699 ~~~~~~~~h~~~V~sl~-fsp-~~~~ll~sgs~Dg~I~iwDi~t~~--~~~~~--~~~~~~v~~sp~~~~ll~~s~---- 768 (903)
.+...+. . ..+..+| |+. .....++++. .+.+++.-+..-. .+++. ......+++.+..-.+.+.+.
T Consensus 662 Lv~spls-~-kev~~~c~f~s~a~~d~l~~~~-~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~ 738 (1096)
T KOG1897|consen 662 LVYSPLS-L-KEVNHMCPFNSDAYPDSLASAN-GGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIES 738 (1096)
T ss_pred EEEeccc-h-HHhhhhcccccccCCceEEEec-CCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEeccccc
Confidence 2222111 1 1111111 221 1223444444 5667777665432 12222 234455666663333333322
Q ss_pred -------C---CeEEEEECCCCeEEEEecCC-CC---CeEEEEEcCC-CCEEEEEeC-----------CeEEEEECCCCC
Q 002591 769 -------E---NVVSILDAETQACRLSLQGH-TK---PIDSVCWDPS-GELLASVSE-----------DSVRVWTVGSGS 822 (903)
Q Consensus 769 -------d---g~I~i~D~~t~~~~~~l~~h-~~---~V~sl~~spd-g~~lasgs~-----------d~I~iwdl~s~~ 822 (903)
+ ..++++|-.+.+.+...+-. .. .|.++.|..| +.++++|+. +.|.||.+....
T Consensus 739 ~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~ 818 (1096)
T KOG1897|consen 739 SAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELN 818 (1096)
T ss_pred chhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCC
Confidence 1 24677777777665543321 12 3455568887 557777652 257777776655
Q ss_pred CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 823 EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 823 ~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
..+.+.+....+ .+.++..- +|+++ ++-...|++|++.+++.+ ....|...+..+...-.+..|+.|.-=++|.+
T Consensus 819 ~L~~v~e~~v~G-av~aL~~f-ngkll--A~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitl 894 (1096)
T KOG1897|consen 819 SLELVAETVVKG-AVYALVEF-NGKLL--AGINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITL 894 (1096)
T ss_pred ceeeeeeeeecc-ceeehhhh-CCeEE--EecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEE
Confidence 555555555433 33333321 34433 445568999999998666 55578888999999888999998876666543
No 374
>PRK10115 protease 2; Provisional
Probab=97.17 E-value=0.19 Score=61.60 Aligned_cols=198 Identities=11% Similarity=0.012 Sum_probs=103.8
Q ss_pred CCeEEEEECCCCCEEEEEeC-C----CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCC-----CcEEE
Q 002591 666 SLITDVRFSPSMPRLATSSF-D----KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD-----GEIRY 735 (903)
Q Consensus 666 ~~V~~l~fspdg~~Lasgs~-D----g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D-----g~I~i 735 (903)
-.+..+.|+||+++|+.+.. + -.|++.|+.++......+.+ .. ..++|.++++.++++...+ ..|++
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~-~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN-VE--PSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC-cc--eEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 45778899999998887643 2 34888899863222222322 11 4599999988888765533 36888
Q ss_pred EEcCCC--eeeEEeecC---ce-eEEEecCCCEEEEEEc---CCeEEEEECC--CCeEEEEecCCCCCeEEEEEcCCCCE
Q 002591 736 WSINNG--SCTRVFKGG---TA-QMRFQPHLGRYLAAAA---ENVVSILDAE--TQACRLSLQGHTKPIDSVCWDPSGEL 804 (903)
Q Consensus 736 wDi~t~--~~~~~~~~~---~~-~v~~sp~~~~ll~~s~---dg~I~i~D~~--t~~~~~~l~~h~~~V~sl~~spdg~~ 804 (903)
+++.++ +....+... .. .+..+.++..+++.+. ++.+.+++.. ++.....+.........+. +..+.+
T Consensus 204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 282 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRF 282 (686)
T ss_pred EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEE
Confidence 899887 444444431 22 1223336666665544 4578888843 3332222222222222222 333333
Q ss_pred EEEEeCC--e--EEEEECCCCCCcceEEEeecC--CCceEEEEEeCCCCEEEEE-ECCC--eEEEEECCCCcEEEEc
Q 002591 805 LASVSED--S--VRVWTVGSGSEGECVHELSCN--GNKFHSCVFHPTYPSLLVI-GCYQ--SLELWNMSENKTMTLT 872 (903)
Q Consensus 805 lasgs~d--~--I~iwdl~s~~~~~~i~~~~~~--~~~i~si~~sp~g~~l~t~-s~dg--~I~vwdl~~~~~~~~~ 872 (903)
++....+ . |...++.... . ...+..+ ...+..+.+. +++|+.. ..++ .|++++..+++...+.
T Consensus 283 y~~tn~~~~~~~l~~~~~~~~~--~-~~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~ 354 (686)
T PRK10115 283 YLRSNRHGKNFGLYRTRVRDEQ--Q-WEELIPPRENIMLEGFTLF--TDWLVVEERQRGLTSLRQINRKTREVIGIA 354 (686)
T ss_pred EEEEcCCCCCceEEEecCCCcc--c-CeEEECCCCCCEEEEEEEE--CCEEEEEEEeCCEEEEEEEcCCCCceEEec
Confidence 3333322 3 4444443211 1 1222222 3367777776 3345444 4455 4566666555444433
No 375
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.15 E-value=0.0011 Score=46.50 Aligned_cols=38 Identities=32% Similarity=0.543 Sum_probs=34.2
Q ss_pred eeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q 002591 614 KEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWH 651 (903)
Q Consensus 614 ~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd 651 (903)
+....+..|...|++++|.+++.++++++.|+.|++||
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 45667778999999999999999999999999999996
No 376
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.13 E-value=0.096 Score=53.42 Aligned_cols=203 Identities=11% Similarity=0.085 Sum_probs=109.0
Q ss_pred EEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecC-CCC-eEEEEEeCCCcEEEEEcCC--CeeeEEee------
Q 002591 679 RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHP-NKD-DLICSCDGDGEIRYWSINN--GSCTRVFK------ 748 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp-~~~-~ll~sgs~Dg~I~iwDi~t--~~~~~~~~------ 748 (903)
++.+--..|.|.-||+........++.+.. +.++.+-- ++. .+.+.|+..-.|.-||... .+..+++.
T Consensus 29 Ll~VDi~ag~v~r~D~~qn~v~ra~ie~p~--~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~~ev~~d~ 106 (310)
T KOG4499|consen 29 LLYVDIEAGEVHRYDIEQNKVYRAKIEGPP--SAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTLFEVQPDR 106 (310)
T ss_pred EEEEEeccCceehhhhhhhheEEEEEecCc--ceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeeccccCchH
Confidence 444444466777788886333333333322 22232221 222 3444555555566677432 22333321
Q ss_pred --cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCC--------CCeEEEEEcCCCCEEE-EEeCC-eEEEE
Q 002591 749 --GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHT--------KPIDSVCWDPSGELLA-SVSED-SVRVW 816 (903)
Q Consensus 749 --~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~--------~~V~sl~~spdg~~la-sgs~d-~I~iw 816 (903)
...+.-..+|++.++.-.-.|-. .++....+....-+.+|. .--+.++|+.+.+.+. +-+.+ +|.-|
T Consensus 107 kknR~NDgkvdP~Gryy~GtMad~~-~~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~ 185 (310)
T KOG4499|consen 107 KKNRLNDGKVDPDGRYYGGTMADFG-DDLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAY 185 (310)
T ss_pred HhcccccCccCCCCceeeeeecccc-ccccccccEEEEeccCCCceeeehhccCCccccccccCcEEEEEccCceEEeee
Confidence 12334557788777443333311 122333333333333332 2235688998877444 45555 78778
Q ss_pred E--CCCCCC--cceEEEeecC---C-CceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEe
Q 002591 817 T--VGSGSE--GECVHELSCN---G-NKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVS 884 (903)
Q Consensus 817 d--l~s~~~--~~~i~~~~~~---~-~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~s 884 (903)
| ..++.. .+.+..++.. + -..-.++...+|..++++-..++|..+|..+|+++ ++.-....|+++||-
T Consensus 186 dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFg 262 (310)
T KOG4499|consen 186 DYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFG 262 (310)
T ss_pred ecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEec
Confidence 8 444422 2333333221 1 11223445667887788888889999999999988 666678899999995
No 377
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.13 E-value=0.0069 Score=73.37 Aligned_cols=127 Identities=12% Similarity=0.115 Sum_probs=89.4
Q ss_pred cCCeEEEEECCCCeEEEEecCCCCC-eEEEEEcC------CCCEEEEEeCCeEEEEECCCCCCcceEEE-e--ecCCCce
Q 002591 768 AENVVSILDAETQACRLSLQGHTKP-IDSVCWDP------SGELLASVSEDSVRVWTVGSGSEGECVHE-L--SCNGNKF 837 (903)
Q Consensus 768 ~dg~I~i~D~~t~~~~~~l~~h~~~-V~sl~~sp------dg~~lasgs~d~I~iwdl~s~~~~~~i~~-~--~~~~~~i 837 (903)
..+.|+-.|+++|+.+..+..|... |..++-.. ....|+..+.+.+..||.|-.. .+++.. . -.....+
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~-~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSG-NKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCC-CceeeccccccccCCCc
Confidence 3578999999999999999987654 55554321 2234555555599999998653 223211 1 1234557
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 838 HSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
.|++-+.+| +||+|+.+|.|++||--..+.. .+.+-..+|.+|+++.||+||+..|..
T Consensus 581 s~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t 639 (794)
T PF08553_consen 581 SCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT 639 (794)
T ss_pred eEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc
Confidence 777776666 6999999999999995432222 566778999999999999998877644
No 378
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.13 E-value=0.016 Score=52.60 Aligned_cols=101 Identities=20% Similarity=0.230 Sum_probs=67.3
Q ss_pred eEEEEEcC---CC-CEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 626 VICCHFSS---DG-KLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 626 V~~l~fsp---dg-~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
|+++++.. || +.|++|+.|..|+||+-+ +.+..+..+ +.|++++-... ..|+.+-.+|+|-+|+-.. .+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~---Rl 74 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRSQ---RL 74 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCcc---ee
Confidence 56666654 44 489999999999999843 566666554 45777777665 5799999999999998643 22
Q ss_pred EEeccCCCceEEEEecC---CCCeEEEEEeCCCcEE
Q 002591 702 RTFMGHSASVMSLDFHP---NKDDLICSCDGDGEIR 734 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp---~~~~ll~sgs~Dg~I~ 734 (903)
...+. ...++++++.. +|..-|++|-.+|.|-
T Consensus 75 WRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 75 WRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 22222 22366665543 3444455888788774
No 379
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.11 E-value=0.29 Score=55.70 Aligned_cols=88 Identities=20% Similarity=0.325 Sum_probs=58.2
Q ss_pred EEEEcCCCCEEEEEeCCCcEEE---EECC-CC----ceeEEecc---CC--CCeEEEEEC-----------CCCCEEEEE
Q 002591 628 CCHFSSDGKLLATGGHDKKAVL---WHTD-TL----KSKTNLEE---HS--SLITDVRFS-----------PSMPRLATS 683 (903)
Q Consensus 628 ~l~fspdg~~Latgs~Dg~V~v---Wd~~-t~----~~~~~l~~---h~--~~V~~l~fs-----------pdg~~Lasg 683 (903)
+++.+|++++||.+..+..|.+ |+.. .+ .......+ +. ..|+++.|- +|...|++|
T Consensus 6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG 85 (415)
T PF14655_consen 6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG 85 (415)
T ss_pred eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence 5678899999999988877665 6442 11 12222211 21 567777763 345689999
Q ss_pred eCCCcEEEEeCCCCCceeEEeccCCCceEEEEec
Q 002591 684 SFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 717 (903)
Q Consensus 684 s~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fs 717 (903)
..+|.|++|... +..+..-.-|.++|..|.+.
T Consensus 86 ~ssG~vrfyte~--G~LL~~Q~~h~~pV~~ik~~ 117 (415)
T PF14655_consen 86 TSSGYVRFYTEN--GVLLLSQLLHEEPVLKIKCR 117 (415)
T ss_pred ecccEEEEEecc--chHHHHHhcCccceEEEEec
Confidence 999999999875 44444444577777777764
No 380
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.10 E-value=0.11 Score=59.70 Aligned_cols=119 Identities=9% Similarity=0.058 Sum_probs=81.1
Q ss_pred CCCeEEEEEcCC----CCEEEEEeCCCcEEEEECC-----CCceeEEeccC---CCC--eEEEEECCCCCEEEEEeCCCc
Q 002591 623 TSKVICCHFSSD----GKLLATGGHDKKAVLWHTD-----TLKSKTNLEEH---SSL--ITDVRFSPSMPRLATSSFDKT 688 (903)
Q Consensus 623 ~~~V~~l~fspd----g~~Latgs~Dg~V~vWd~~-----t~~~~~~l~~h---~~~--V~~l~fspdg~~Lasgs~Dg~ 688 (903)
-..|..++|.|- ...|++.-..+.|.||-+. +.+.+..-..+ .-+ -..+.|+|....|++-.....
T Consensus 56 FEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dv 135 (671)
T PF15390_consen 56 FEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDV 135 (671)
T ss_pred cceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCce
Confidence 346899999984 3345555678899999865 22222221111 111 235779999998877776665
Q ss_pred EEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC
Q 002591 689 VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 741 (903)
Q Consensus 689 I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~ 741 (903)
-.++++..+...++.-....+.|.|.||.+||.+++++.+..=.-+|||-...
T Consensus 136 SV~~sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 136 SVLPSVHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred eEeeeeeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 56777776555555444567889999999999999988777777889986543
No 381
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.09 E-value=0.24 Score=52.46 Aligned_cols=192 Identities=13% Similarity=0.112 Sum_probs=119.6
Q ss_pred eeEEecc-CCCCeEEEEECCCCCEEEEEeCCC--cEEEEeCCCCCceeEEec-cCCCceEEEEecCCCCeEEEEEeCCCc
Q 002591 657 SKTNLEE-HSSLITDVRFSPSMPRLATSSFDK--TVRVWDADNPGYSLRTFM-GHSASVMSLDFHPNKDDLICSCDGDGE 732 (903)
Q Consensus 657 ~~~~l~~-h~~~V~~l~fspdg~~Lasgs~Dg--~I~IWDl~~~~~~~~~~~-~h~~~V~sl~fsp~~~~ll~sgs~Dg~ 732 (903)
.+.++.. .....-.+.|..++.++-+.+.-| .|+.+|+.+ ++...... ...-.--.|+.. ++.++.-.-.++.
T Consensus 35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~t-g~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~ 111 (264)
T PF05096_consen 35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLET-GKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGT 111 (264)
T ss_dssp EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTT-SSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSE
T ss_pred EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCC-CcEEEEEECCccccceeEEEE--CCEEEEEEecCCe
Confidence 3444432 233455777877787777777755 699999998 44443332 222333345555 3456666778999
Q ss_pred EEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCC--C---CCeEEEEEcCCCCEEEE
Q 002591 733 IRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGH--T---KPIDSVCWDPSGELLAS 807 (903)
Q Consensus 733 I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h--~---~~V~sl~~spdg~~las 807 (903)
..+||..+.+.+..+.-....--...++..++.+.....|+++|.++.+.+..+... . ..++.+.|. +|.+.|-
T Consensus 112 ~f~yd~~tl~~~~~~~y~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyAN 190 (264)
T PF05096_consen 112 GFVYDPNTLKKIGTFPYPGEGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYAN 190 (264)
T ss_dssp EEEEETTTTEEEEEEE-SSS--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEE
T ss_pred EEEEccccceEEEEEecCCcceEEEcCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEE
Confidence 999999999988887654433333477888999888999999999998777665532 2 235566776 4665555
Q ss_pred EeCC-eEEEEECCCCCCcceEEEee---------------cCCCceEEEEEeCCCCEEEEEECC
Q 002591 808 VSED-SVRVWTVGSGSEGECVHELS---------------CNGNKFHSCVFHPTYPSLLVIGCY 855 (903)
Q Consensus 808 gs~d-~I~iwdl~s~~~~~~i~~~~---------------~~~~~i~si~~sp~g~~l~t~s~d 855 (903)
.-.. .|...|..++. ++..+. ....-.+.|++.|....|++.+..
T Consensus 191 VW~td~I~~Idp~tG~---V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~ 251 (264)
T PF05096_consen 191 VWQTDRIVRIDPETGK---VVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKL 251 (264)
T ss_dssp ETTSSEEEEEETTT-B---EEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT
T ss_pred eCCCCeEEEEeCCCCe---EEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCC
Confidence 5444 88888888873 332221 113457899999988887777654
No 382
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.07 E-value=0.018 Score=66.85 Aligned_cols=135 Identities=8% Similarity=0.093 Sum_probs=93.5
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee
Q 002591 664 HSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 743 (903)
Q Consensus 664 h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~ 743 (903)
|...|.--++...+++|+.|+.-|.|++|+-..+........+-.+.+..++.+++ .+++|.|+..|.|.++-+..+..
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~-e~lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSV-EYLVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecch-hHhhhhhcCCceEEeehhhccCC
Confidence 44455556667788999999999999999987633333333334455555666665 66888899899999998776321
Q ss_pred -----e----EEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCC----eEEEEecCCCCCeEEEEEc
Q 002591 744 -----T----RVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQ----ACRLSLQGHTKPIDSVCWD 799 (903)
Q Consensus 744 -----~----~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~----~~~~~l~~h~~~V~sl~~s 799 (903)
+ ...+..+++++|++++..+++|...|.|.+..+.+. .....+....+.|.-+.+.
T Consensus 111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence 1 112345788999999999999999999999887772 1122233345667666655
No 383
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.06 E-value=0.41 Score=50.68 Aligned_cols=192 Identities=14% Similarity=0.114 Sum_probs=115.0
Q ss_pred ceeeeeEeecCCC-CeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCceeEEeccCC-CCeEEEEECCCCCEEEEEeCCC
Q 002591 612 SFKEANSVRASTS-KVICCHFSSDGKLLATGGHDK--KAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLATSSFDK 687 (903)
Q Consensus 612 ~~~~~~~l~~H~~-~V~~l~fspdg~~Latgs~Dg--~V~vWd~~t~~~~~~l~~h~-~~V~~l~fspdg~~Lasgs~Dg 687 (903)
.++.+.++..... -.-.+.|..+|.++-+.+.-| .|+.+|+++++......-.. .--..|+... ++.+...=.++
T Consensus 32 ~~~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~ 110 (264)
T PF05096_consen 32 SYEVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEG 110 (264)
T ss_dssp EEEEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSS
T ss_pred eeEEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCC
Confidence 3445555543233 334677878888888877666 69999999998776654221 1222233322 22333334488
Q ss_pred cEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec--------CceeEEEecC
Q 002591 688 TVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG--------GTAQMRFQPH 759 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~--------~~~~v~~sp~ 759 (903)
...+||.++ -+.+.++. ....=+.|+. ++..++ ..+....|+++|..+.+..+.+.. ..+.+.|.
T Consensus 111 ~~f~yd~~t-l~~~~~~~-y~~EGWGLt~--dg~~Li-~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-- 183 (264)
T PF05096_consen 111 TGFVYDPNT-LKKIGTFP-YPGEGWGLTS--DGKRLI-MSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-- 183 (264)
T ss_dssp EEEEEETTT-TEEEEEEE--SSS--EEEE--CSSCEE-EE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE--
T ss_pred eEEEEcccc-ceEEEEEe-cCCcceEEEc--CCCEEE-EECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE--
Confidence 899999987 56666665 3456677774 456666 445577899999988876665532 23334454
Q ss_pred CCEEEEEEc-CCeEEEEECCCCeEEEEecC------------C---CCCeEEEEEcCCCCEEEEEeCC
Q 002591 760 LGRYLAAAA-ENVVSILDAETQACRLSLQG------------H---TKPIDSVCWDPSGELLASVSED 811 (903)
Q Consensus 760 ~~~ll~~s~-dg~I~i~D~~t~~~~~~l~~------------h---~~~V~sl~~spdg~~lasgs~d 811 (903)
++.+++-.. ...|...|..+|+++..+.. + ....+.|+|+|....|...+..
T Consensus 184 ~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~ 251 (264)
T PF05096_consen 184 NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKL 251 (264)
T ss_dssp TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT
T ss_pred cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCC
Confidence 455665544 67899999999998876521 1 3468899999987755555544
No 384
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.05 E-value=0.093 Score=55.04 Aligned_cols=229 Identities=12% Similarity=0.104 Sum_probs=127.8
Q ss_pred EEEEEcCCCC-EEEEEeCCCc-EEEEECCCCceeEEeccCCC--CeEEEEECCCCCEEEEEeC-----CCcEEEEeCCCC
Q 002591 627 ICCHFSSDGK-LLATGGHDKK-AVLWHTDTLKSKTNLEEHSS--LITDVRFSPSMPRLATSSF-----DKTVRVWDADNP 697 (903)
Q Consensus 627 ~~l~fspdg~-~Latgs~Dg~-V~vWd~~t~~~~~~l~~h~~--~V~~l~fspdg~~Lasgs~-----Dg~I~IWDl~~~ 697 (903)
..|+|+|... -++.+-.-|+ ..++|........++...++ .--.=.|++||.+|+..-. -|.|-|||.+..
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~ 150 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG 150 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc
Confidence 3567777543 4555555555 56788877666555432111 1222369999999988744 377999999976
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEeC-----------------CCcEEEEEcCCCeeeEEeec-------Ccee
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCDG-----------------DGEIRYWSINNGSCTRVFKG-------GTAQ 753 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~-----------------Dg~I~iwDi~t~~~~~~~~~-------~~~~ 753 (903)
-..+-.+..|.-.-..+.|.+||+.+++..+. .-.+.+.|..++..+....- .+..
T Consensus 151 fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRH 230 (366)
T COG3490 151 FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRH 230 (366)
T ss_pred cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceee
Confidence 66677888888888889999998876654330 01233334344444333221 2334
Q ss_pred EEEecCCCEEEEEEcCCe-----EEEEECCCCeEEEEecC-------CCCCeEEEEEcCCCCEEEEEeCC--eEEEEECC
Q 002591 754 MRFQPHLGRYLAAAAENV-----VSILDAETQACRLSLQG-------HTKPIDSVCWDPSGELLASVSED--SVRVWTVG 819 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~-----I~i~D~~t~~~~~~l~~-------h~~~V~sl~~spdg~~lasgs~d--~I~iwdl~ 819 (903)
+...+++..++.+-..|- -.+=-...++.+.-+.. ....|-+|+.+.+..+++..+.. ...+||..
T Consensus 231 ld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~ 310 (366)
T COG3490 231 LDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAA 310 (366)
T ss_pred eeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcC
Confidence 445555444333322220 00001112222222211 12346778888766666655544 88999999
Q ss_pred CCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEE
Q 002591 820 SGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWN 862 (903)
Q Consensus 820 s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwd 862 (903)
++. .+.... -..++-.-+...-|++.+.+|.|.++.
T Consensus 311 tG~---vv~~a~----l~daaGva~~~~gf~vssg~G~~~~~s 346 (366)
T COG3490 311 TGA---VVSEAA----LPDAAGVAAAKGGFAVSSGQGRIIFYS 346 (366)
T ss_pred CCc---EEeccc----ccccccceeccCceEEecCCceEEecc
Confidence 873 222211 111122334445588888889888884
No 385
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.03 E-value=0.064 Score=64.20 Aligned_cols=206 Identities=12% Similarity=0.080 Sum_probs=112.6
Q ss_pred CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEe-----CCC--cEEEEEcCCCeeeEEee-cCceeEEEe
Q 002591 686 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCD-----GDG--EIRYWSINNGSCTRVFK-GGTAQMRFQ 757 (903)
Q Consensus 686 Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs-----~Dg--~I~iwDi~t~~~~~~~~-~~~~~v~~s 757 (903)
+|.+.-.+-.. ...+.-..+....+.+.+++|++..++++.. .|. .|.+++.... ...... .....-.|+
T Consensus 328 ~G~l~~~~~~~-~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~-~~~lt~g~~~t~PsWs 405 (591)
T PRK13616 328 DGSLVSVDGQG-VTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV-AVQVLEGHSLTRPSWS 405 (591)
T ss_pred CCeEEEecCCC-eeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc-ceeeecCCCCCCceEC
Confidence 66665443221 1122222233346788999999998877662 233 4555564322 222222 235667899
Q ss_pred cCCCEEEEEEcC------------CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEE---EECCCCC
Q 002591 758 PHLGRYLAAAAE------------NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRV---WTVGSGS 822 (903)
Q Consensus 758 p~~~~ll~~s~d------------g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~i---wdl~s~~ 822 (903)
|+++.+++.... +.+.+.+++.+.... .....|..+.|+|||..|+....+.|++ -....+.
T Consensus 406 pDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~~g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 406 LDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMIIGGKVYLAVVEQTEDGQ 482 (591)
T ss_pred CCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEECCEEEEEEEEeCCCCc
Confidence 998877766533 233333444333322 2346799999999999888776666666 3322332
Q ss_pred Ccce--EEEeec-CCCceEEEEEeCCCCEEEEEECCCe--EEEEECCCCcEEEEcc--CCCCEEEEEEecCCCEEEEEec
Q 002591 823 EGEC--VHELSC-NGNKFHSCVFHPTYPSLLVIGCYQS--LELWNMSENKTMTLTA--HEGLIAALAVSTETGYVASASH 895 (903)
Q Consensus 823 ~~~~--i~~~~~-~~~~i~si~~sp~g~~l~t~s~dg~--I~vwdl~~~~~~~~~~--h~~~V~sl~~spdg~~LaSgs~ 895 (903)
... ...+.. -...+..+.|..++. |+++..++. |+..++.......+.. ....|.+|+-++. .|+....
T Consensus 483 -~~l~~~~~l~~~l~~~~~~l~W~~~~~-L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~ 558 (591)
T PRK13616 483 -YALTNPREVGPGLGDTAVSLDWRTGDS-LVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDA 558 (591)
T ss_pred -eeecccEEeecccCCccccceEecCCE-EEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcC
Confidence 111 111222 233357889999988 455555543 4444555333222222 3566777777653 3555556
Q ss_pred CCcEE
Q 002591 896 DKFVK 900 (903)
Q Consensus 896 DG~I~ 900 (903)
+|.+.
T Consensus 559 ~g~~~ 563 (591)
T PRK13616 559 RAVLQ 563 (591)
T ss_pred CceEE
Confidence 66544
No 386
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.96 E-value=0.37 Score=53.80 Aligned_cols=66 Identities=9% Similarity=0.015 Sum_probs=41.6
Q ss_pred CceEEEEEeC-------CCCEEEEEECCCeEEEEECCCCcEE----EEc-cCCCCEEEEEEecCCCEEEEEecCCcEE
Q 002591 835 NKFHSCVFHP-------TYPSLLVIGCYQSLELWNMSENKTM----TLT-AHEGLIAALAVSTETGYVASASHDKFVK 900 (903)
Q Consensus 835 ~~i~si~~sp-------~g~~l~t~s~dg~I~vwdl~~~~~~----~~~-~h~~~V~sl~~spdg~~LaSgs~DG~I~ 900 (903)
..+..+.|.. .+.+|++.-..+.|...++.++..+ .+. .....+..+++.|||.++++.+.+|.|+
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 4455666653 3344555555568888888755433 222 3445899999999999998888888874
No 387
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=96.94 E-value=0.0022 Score=44.81 Aligned_cols=39 Identities=36% Similarity=0.537 Sum_probs=34.6
Q ss_pred CceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEe
Q 002591 655 LKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 655 ~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWD 693 (903)
++.+..+..|...|.++.|.+++.++++++.|+.|++||
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345667778999999999999999999999999999996
No 388
>PHA02713 hypothetical protein; Provisional
Probab=96.94 E-value=0.054 Score=64.82 Aligned_cols=214 Identities=9% Similarity=0.072 Sum_probs=105.9
Q ss_pred cEEEEECCCCcee--EEeccCCCCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCceeEEecc---CCCceEEE
Q 002591 646 KAVLWHTDTLKSK--TNLEEHSSLITDVRFSPSMPRLATSSFD------KTVRVWDADNPGYSLRTFMG---HSASVMSL 714 (903)
Q Consensus 646 ~V~vWd~~t~~~~--~~l~~h~~~V~~l~fspdg~~Lasgs~D------g~I~IWDl~~~~~~~~~~~~---h~~~V~sl 714 (903)
.+..||..+.+-. ..+...... .+++. -++..++.|+.+ ..+..||..+... ..+.. ..... ++
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~-~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W--~~~~~m~~~R~~~-~~ 347 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIIN-YASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIH--VELPPMIKNRCRF-SL 347 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccc-eEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeE--eeCCCCcchhhce-eE
Confidence 5677887654322 222211111 12222 256677777753 3477888876322 11111 11111 22
Q ss_pred EecCCCCeEEEEEeCCC-----cEEEEEcCCCeeeEE--eecCceeE-EEecCCCEEEEEEcC-----------------
Q 002591 715 DFHPNKDDLICSCDGDG-----EIRYWSINNGSCTRV--FKGGTAQM-RFQPHLGRYLAAAAE----------------- 769 (903)
Q Consensus 715 ~fsp~~~~ll~sgs~Dg-----~I~iwDi~t~~~~~~--~~~~~~~v-~~sp~~~~ll~~s~d----------------- 769 (903)
+.. ++.+++.|+.++ .|..||..+.+.... +....... ....++..+++|+.+
T Consensus 348 ~~~--~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~ 425 (557)
T PHA02713 348 AVI--DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDME 425 (557)
T ss_pred EEE--CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCccccccccccccccccc
Confidence 222 345767777654 488899887754332 11111111 122344555555543
Q ss_pred ------CeEEEEECCCCeEEEEecCCCCCeE-EEEEcCCCCEEEEEeCC-------eEEEEECCCCCCcceEEEeecCCC
Q 002591 770 ------NVVSILDAETQACRLSLQGHTKPID-SVCWDPSGELLASVSED-------SVRVWTVGSGSEGECVHELSCNGN 835 (903)
Q Consensus 770 ------g~I~i~D~~t~~~~~~l~~h~~~V~-sl~~spdg~~lasgs~d-------~I~iwdl~s~~~~~~i~~~~~~~~ 835 (903)
..|..||.++.+-...-.-...... +++ .-++++.+.|+.+ .+..||..+......+..+.....
T Consensus 426 ~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~ 504 (557)
T PHA02713 426 EDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLS 504 (557)
T ss_pred ccccccceEEEECCCCCeEeecCCCCcccccCcEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccc
Confidence 2477888877643321111111111 222 2246655656532 367888876212333333333222
Q ss_pred ceEEEEEeCCCCEEEEEECCC--eEEEEECCCCcEE
Q 002591 836 KFHSCVFHPTYPSLLVIGCYQ--SLELWNMSENKTM 869 (903)
Q Consensus 836 ~i~si~~sp~g~~l~t~s~dg--~I~vwdl~~~~~~ 869 (903)
....+++ +++..++|+.++ .+..||..+.+..
T Consensus 505 ~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~ 538 (557)
T PHA02713 505 ALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWN 538 (557)
T ss_pred cceeEEE--CCEEEEEeeecceeehhhcCccccccc
Confidence 2222233 677788888887 7889998888765
No 389
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.94 E-value=0.05 Score=49.50 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=66.6
Q ss_pred eEEEEEcC---CCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCc
Q 002591 793 IDSVCWDP---SGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENK 867 (903)
Q Consensus 793 V~sl~~sp---dg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~ 867 (903)
|+++++.. +|. .|++|++| .||+|+-. ..+.++.. ...+..++-... ..|+.+..+|+|-+|+-....
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~-----e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~Rl 74 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD-----EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRL 74 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC-----cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCccee
Confidence 55666554 443 88899999 99999854 45566554 456666666555 569999999999999864333
Q ss_pred EEEEccCCCCEEEEEEec-CC---CEEEEEecCCcEEE
Q 002591 868 TMTLTAHEGLIAALAVST-ET---GYVASASHDKFVKL 901 (903)
Q Consensus 868 ~~~~~~h~~~V~sl~~sp-dg---~~LaSgs~DG~I~I 901 (903)
... .....+.++++.. ++ .-|++|-.+|.|-+
T Consensus 75 WRi--KSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 75 WRI--KSKNQVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eee--ccCCCeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 222 2333366665543 32 26889989998854
No 390
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.92 E-value=0.081 Score=58.01 Aligned_cols=185 Identities=17% Similarity=0.185 Sum_probs=113.4
Q ss_pred EEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecC----
Q 002591 714 LDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQG---- 788 (903)
Q Consensus 714 l~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~---- 788 (903)
..|.++...++.+--..+.|.-||..+++ ...........+.....++.|+++.. .+.+++.+++..+..+..
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g~Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~ 107 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKRVFPSPGGFSSGALIDAGGRLIACEH--GVRLLDPDTGGKITLLAEPEDG 107 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceEEEECCCCcccceeecCCCeEEEEcc--ccEEEeccCCceeEEeccccCC
Confidence 45777777777777778899999988664 33344445555555555566665543 345555555544222211
Q ss_pred -CCCCeEEEEEcCCCCEEEEEeC---------C-eEEEEECC-CCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC-
Q 002591 789 -HTKPIDSVCWDPSGELLASVSE---------D-SVRVWTVG-SGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY- 855 (903)
Q Consensus 789 -h~~~V~sl~~spdg~~lasgs~---------d-~I~iwdl~-s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d- 855 (903)
.....+.+...|+|.+.++... . .-.||.+. .+ ..+..+..+-..-+.++|+||++.++++...
T Consensus 108 ~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g---~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~ 184 (307)
T COG3386 108 LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDG---GVVRLLDDDLTIPNGLAFSPDGKTLYVADTPA 184 (307)
T ss_pred CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCC---CEEEeecCcEEecCceEECCCCCEEEEEeCCC
Confidence 1234567889999997776544 1 22455554 22 3334444334556788999999988888775
Q ss_pred CeEEEEECCC--C----c--EEEEccCCCCEEEEEEecCCCEEEEEecCC-cEEEcC
Q 002591 856 QSLELWNMSE--N----K--TMTLTAHEGLIAALAVSTETGYVASASHDK-FVKLWK 903 (903)
Q Consensus 856 g~I~vwdl~~--~----~--~~~~~~h~~~V~sl~~spdg~~LaSgs~DG-~I~IWd 903 (903)
+.|+-|++.. + + .+....+.+..-.++...+|.+.+++..+| .|.+|+
T Consensus 185 ~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~ 241 (307)
T COG3386 185 NRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFN 241 (307)
T ss_pred CeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEEC
Confidence 6888887762 1 1 112223456677788888888776555554 677664
No 391
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.82 E-value=0.31 Score=51.71 Aligned_cols=191 Identities=12% Similarity=0.125 Sum_probs=121.2
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccC-CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 619 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH-SSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 619 l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h-~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
+.+-+..|.++.|+|+.+.|++......-.||=...|..++++.-. -..-..|.|..++.+.++--.+..+.++.++..
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 4455566999999999998888888888888877789999887621 233456778778877777777888988877753
Q ss_pred CceeE---------EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-ee------------EEeecCceeEE
Q 002591 698 GYSLR---------TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CT------------RVFKGGTAQMR 755 (903)
Q Consensus 698 ~~~~~---------~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~------------~~~~~~~~~v~ 755 (903)
...+. .........-.++|.|....++ .+-+..-+.||.+.... .+ ..+-..+..+.
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~-~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~ 239 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLF-VAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLE 239 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEE-EEEccCCcEEEEEecCCcccccccccCcccccceEeeccccce
Confidence 32211 1112245677899999988777 55566677777765432 11 11223456677
Q ss_pred EecCCCEEEEEEc-CCeEEEEECCCCeEEEEecCCC---------CCeEEEEEcCCCCEEEEEeCC
Q 002591 756 FQPHLGRYLAAAA-ENVVSILDAETQACRLSLQGHT---------KPIDSVCWDPSGELLASVSED 811 (903)
Q Consensus 756 ~sp~~~~ll~~s~-dg~I~i~D~~t~~~~~~l~~h~---------~~V~sl~~spdg~~lasgs~d 811 (903)
|.+..+.+++-+. ++.+.-.|.... .+..+.-+. .....|+.+++|.+.+++-.+
T Consensus 240 ~~~~~~~LLVLS~ESr~l~Evd~~G~-~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIvSEPn 304 (316)
T COG3204 240 FNAITNSLLVLSDESRRLLEVDLSGE-VIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIVSEPN 304 (316)
T ss_pred ecCCCCcEEEEecCCceEEEEecCCC-eeeeEEeccCCCCCcccCCCcceeEECCCCCEEEEecCC
Confidence 8877766666555 455555665433 233222111 124567777777754444333
No 392
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.75 E-value=0.058 Score=64.50 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=113.4
Q ss_pred CCEEEEEeCC------CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCC------CcEEEEEcCCCeee
Q 002591 677 MPRLATSSFD------KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGD------GEIRYWSINNGSCT 744 (903)
Q Consensus 677 g~~Lasgs~D------g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D------g~I~iwDi~t~~~~ 744 (903)
+.+++.|+.+ ..|..||..+.......-......-.++++.. +.++++|+.| ..+..||.++.+..
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~--~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLN--GKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEEC--CEEEEEccccCCCcccceEEEecCCCCcee
Confidence 4455566555 35778888764222111111233344455553 4577788888 35778888887744
Q ss_pred EEee--cCceeEE-EecCCCEEEEEEcCC-----eEEEEECCCCeEEEE--ecCCCCCeEEEEEcCCCCEEEEEeCC---
Q 002591 745 RVFK--GGTAQMR-FQPHLGRYLAAAAEN-----VVSILDAETQACRLS--LQGHTKPIDSVCWDPSGELLASVSED--- 811 (903)
Q Consensus 745 ~~~~--~~~~~v~-~sp~~~~ll~~s~dg-----~I~i~D~~t~~~~~~--l~~h~~~V~sl~~spdg~~lasgs~d--- 811 (903)
..-. ....... ..-++..+++|+.|| .|..||.++.+.... +......+..+. -+|.+.++|+.+
T Consensus 363 ~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~--~~g~iYi~GG~~~~~ 440 (571)
T KOG4441|consen 363 PVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAV--LGGKLYIIGGGDGSS 440 (571)
T ss_pred ccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEE--ECCEEEEEcCcCCCc
Confidence 3221 1112222 233455666777775 688888887643322 211111122222 247766666633
Q ss_pred ----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC-----eEEEEECCCCcEEEEccCCCCEEEEE
Q 002591 812 ----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ-----SLELWNMSENKTMTLTAHEGLIAALA 882 (903)
Q Consensus 812 ----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg-----~I~vwdl~~~~~~~~~~h~~~V~sl~ 882 (903)
++..||..+..- ..+..+........ +..-++..+++||.|+ +|..||..+.+...+..-......+.
T Consensus 441 ~~l~sve~YDP~t~~W-~~~~~M~~~R~~~g--~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g 517 (571)
T KOG4441|consen 441 NCLNSVECYDPETNTW-TLIAPMNTRRSGFG--VAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVG 517 (571)
T ss_pred cccceEEEEcCCCCce-eecCCcccccccce--EEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCcccccccc
Confidence 578888876521 12222211111122 2223566677777665 58999999988775543222222221
Q ss_pred E-ecCCCEEEEEecCCc
Q 002591 883 V-STETGYVASASHDKF 898 (903)
Q Consensus 883 ~-spdg~~LaSgs~DG~ 898 (903)
+ .-+++..++|+.||.
T Consensus 518 ~~~~~~~ly~vGG~~~~ 534 (571)
T KOG4441|consen 518 VVVLGGKLYAVGGFDGN 534 (571)
T ss_pred EEEECCEEEEEecccCc
Confidence 1 235677888888875
No 393
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.71 E-value=0.036 Score=62.44 Aligned_cols=137 Identities=10% Similarity=0.085 Sum_probs=95.9
Q ss_pred EEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCe-------EEEEEeCCCcEEEEEcCCCee--eEE----
Q 002591 680 LATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDD-------LICSCDGDGEIRYWSINNGSC--TRV---- 746 (903)
Q Consensus 680 Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~-------ll~sgs~Dg~I~iwDi~t~~~--~~~---- 746 (903)
|.++..-..|+-.|++. ++++..+.-+.. |.-+.+.|+... -| .|-.|..|+-||.+-... +..
T Consensus 349 l~~~~~~~~l~klDIE~-GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~Tl-vGLs~n~vfriDpRv~~~~kl~~~q~k 425 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIER-GKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTL-VGLSDNSVFRIDPRVQGKNKLAVVQSK 425 (644)
T ss_pred eeCCCCcCcceeeeccc-ceeeeEeeccCC-cceeeccCCcchhcccccccE-EeecCCceEEecccccCcceeeeeecc
Confidence 34445556688889987 888888887766 777778776432 23 466789999999984322 111
Q ss_pred -eecCce-eEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECC
Q 002591 747 -FKGGTA-QMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVG 819 (903)
Q Consensus 747 -~~~~~~-~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~ 819 (903)
|..... .+...-..+++++|+.+|.|++||--.......+.+-..+|..|..+.+|++|++.+...+.+.++.
T Consensus 426 qy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~tyLlLi~t~ 500 (644)
T KOG2395|consen 426 QYSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKTYLLLIDTL 500 (644)
T ss_pred ccccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEecccEEEEEEEe
Confidence 112221 1222334589999999999999998444445556778899999999999999998888877776654
No 394
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=96.68 E-value=0.18 Score=51.50 Aligned_cols=133 Identities=14% Similarity=0.169 Sum_probs=89.2
Q ss_pred CCCeEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEE
Q 002591 665 SSLITDVRFSPSMPRLATSSFD---------KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRY 735 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~D---------g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~i 735 (903)
....++-..+|+|++++-.-.| |.++.|-... .+..+...-.--..|+|..+.+.+.++-+.+-+|.-
T Consensus 108 knR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h---~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a 184 (310)
T KOG4499|consen 108 KNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH---QVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDA 184 (310)
T ss_pred hcccccCccCCCCceeeeeeccccccccccccEEEEeccCC---CceeeehhccCCccccccccCcEEEEEccCceEEee
Confidence 4456677788999984433222 4455554432 122222222333458898887777778888889988
Q ss_pred EE--cCCCee-----eEEeec-------CceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcC
Q 002591 736 WS--INNGSC-----TRVFKG-------GTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDP 800 (903)
Q Consensus 736 wD--i~t~~~-----~~~~~~-------~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~sp 800 (903)
|| ..+|.. +..++. ....+++...++.++++-..++|..+|..+++.+.+++-....|+|+||--
T Consensus 185 ~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 185 YDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred eecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 88 555532 222211 122356667778888888899999999999999999998899999999974
No 395
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.66 E-value=0.3 Score=51.82 Aligned_cols=188 Identities=15% Similarity=0.208 Sum_probs=109.0
Q ss_pred eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec----CceeEEEecCCCEEEEEEcCCeEEEEECCC
Q 002591 704 FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG----GTAQMRFQPHLGRYLAAAAENVVSILDAET 779 (903)
Q Consensus 704 ~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~----~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t 779 (903)
+.+....|.++.|+|+.+.++++.. ...-.+|=...|..++++.- ....+.+.-.+.+.++--.+..++++.+..
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n-~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~ 159 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTN-KPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDA 159 (316)
T ss_pred cccccccccceeeCCCcceEEEecC-CCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcC
Confidence 3455566999999999888875554 55555666667888887653 345577777666666555677888776554
Q ss_pred CeEEE-------Eec--CC-CCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecC-------CCceEEEE
Q 002591 780 QACRL-------SLQ--GH-TKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCN-------GNKFHSCV 841 (903)
Q Consensus 780 ~~~~~-------~l~--~h-~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~-------~~~i~si~ 841 (903)
...+. .+. .+ ......++|+|....|+.+-+. -+.||.+........++....+ -..+..+.
T Consensus 160 ~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~ 239 (316)
T COG3204 160 DTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLE 239 (316)
T ss_pred CccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccce
Confidence 42211 111 12 5678899999988866666655 4555544432211111111111 12366778
Q ss_pred EeCCCCEEEE-EECCCeEEEEECCCCcEE--EEccCC-------CCEEEEEEecCCCEEEE
Q 002591 842 FHPTYPSLLV-IGCYQSLELWNMSENKTM--TLTAHE-------GLIAALAVSTETGYVAS 892 (903)
Q Consensus 842 ~sp~g~~l~t-~s~dg~I~vwdl~~~~~~--~~~~h~-------~~V~sl~~spdg~~LaS 892 (903)
|++....+++ +..++.|.-.|....-.- .+.+.. .....++...+|.+.++
T Consensus 240 ~~~~~~~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~lYIv 300 (316)
T COG3204 240 FNAITNSLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNLYIV 300 (316)
T ss_pred ecCCCCcEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCCCEEEE
Confidence 8875555554 445567777777655322 222111 12346777777664443
No 396
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.63 E-value=0.093 Score=62.78 Aligned_cols=229 Identities=14% Similarity=0.114 Sum_probs=118.0
Q ss_pred CCCCEEEEEeCC------CcEEEEECCCCceeEEecc-CCCCeEEEEECCCCCEEEEEeCC------CcEEEEeCCCCCc
Q 002591 633 SDGKLLATGGHD------KKAVLWHTDTLKSKTNLEE-HSSLITDVRFSPSMPRLATSSFD------KTVRVWDADNPGY 699 (903)
Q Consensus 633 pdg~~Latgs~D------g~V~vWd~~t~~~~~~l~~-h~~~V~~l~fspdg~~Lasgs~D------g~I~IWDl~~~~~ 699 (903)
..+.+++.|+.+ ..|..||..+..-.....- +...-.++++. ++.+.++|+.| .++..||..+...
T Consensus 283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W 361 (571)
T KOG4441|consen 283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQW 361 (571)
T ss_pred CCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCce
Confidence 345566777766 3678888776532222211 22223334443 44678888888 3577888876432
Q ss_pred eeEEeccCCCceEEEEecCCCCeEEEEEeCCCc-----EEEEEcCCCeeeEEe--ecCceeEEEe-cCCCEEEEEEcC--
Q 002591 700 SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE-----IRYWSINNGSCTRVF--KGGTAQMRFQ-PHLGRYLAAAAE-- 769 (903)
Q Consensus 700 ~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~-----I~iwDi~t~~~~~~~--~~~~~~v~~s-p~~~~ll~~s~d-- 769 (903)
..+..-...-..+....-++.+.++|+.||. |..||.++.+....- .......... -++..+++|+.+
T Consensus 362 --~~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~ 439 (571)
T KOG4441|consen 362 --TPVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGS 439 (571)
T ss_pred --eccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCC
Confidence 1111111111111111224567788888864 777888776543322 1222223333 344455555544
Q ss_pred ----CeEEEEECCCCeEEEE--ecCCCCCeEEEEEcCCCCEEEEEeCC------eEEEEECCCCCCcceEEEeecCCCce
Q 002591 770 ----NVVSILDAETQACRLS--LQGHTKPIDSVCWDPSGELLASVSED------SVRVWTVGSGSEGECVHELSCNGNKF 837 (903)
Q Consensus 770 ----g~I~i~D~~t~~~~~~--l~~h~~~V~sl~~spdg~~lasgs~d------~I~iwdl~s~~~~~~i~~~~~~~~~i 837 (903)
..|..||..+.+.... +..-..... ++.. ++.+.+.|+.+ +|..||..+..- ..+.........+
T Consensus 440 ~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~~-~~~iYvvGG~~~~~~~~~VE~ydp~~~~W-~~v~~m~~~rs~~ 516 (571)
T KOG4441|consen 440 SNCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAVL-NGKIYVVGGFDGTSALSSVERYDPETNQW-TMVAPMTSPRSAV 516 (571)
T ss_pred ccccceEEEEcCCCCceeecCCcccccccce-EEEE-CCEEEEECCccCCCccceEEEEcCCCCce-eEcccCccccccc
Confidence 3678899888754332 222122222 3322 36666666644 478888876421 2222222212222
Q ss_pred EEEEEeCCCCEEEEEECCC-----eEEEEECCCCcEE
Q 002591 838 HSCVFHPTYPSLLVIGCYQ-----SLELWNMSENKTM 869 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~dg-----~I~vwdl~~~~~~ 869 (903)
.. ..-++...++|+.|+ +|..||..+++..
T Consensus 517 g~--~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~ 551 (571)
T KOG4441|consen 517 GV--VVLGGKLYAVGGFDGNNNLNTVECYDPETDTWT 551 (571)
T ss_pred cE--EEECCEEEEEecccCccccceeEEcCCCCCcee
Confidence 11 222566677777775 7888888777655
No 397
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.53 E-value=0.7 Score=49.44 Aligned_cols=184 Identities=14% Similarity=0.122 Sum_probs=100.2
Q ss_pred ceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe-e-cCceeEEEecCCCEEEEEEcCCeEEEE-ECCCCeEE-EE
Q 002591 710 SVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF-K-GGTAQMRFQPHLGRYLAAAAENVVSIL-DAETQACR-LS 785 (903)
Q Consensus 710 ~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~-~-~~~~~v~~sp~~~~ll~~s~dg~I~i~-D~~t~~~~-~~ 785 (903)
.+.+.++++++..+.+....++.-.+|-...+...... . .....-.|++++...++...+...+++ +..++... ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~ 104 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE 104 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE
Confidence 68889999999877766633444444444433322222 2 355667789996555555555665665 33333222 11
Q ss_pred ecC--CCCCeEEEEEcCCCCEEEEEe----CCeEEEEECCCCCCc------ceEEEeecCCCceEEEEEeCCCCEEEEEE
Q 002591 786 LQG--HTKPIDSVCWDPSGELLASVS----EDSVRVWTVGSGSEG------ECVHELSCNGNKFHSCVFHPTYPSLLVIG 853 (903)
Q Consensus 786 l~~--h~~~V~sl~~spdg~~lasgs----~d~I~iwdl~s~~~~------~~i~~~~~~~~~i~si~~sp~g~~l~t~s 853 (903)
+.. ....|..+.++|||..++... ...|.|--+...... ..+.........+..+.|.+++..++.+.
T Consensus 105 v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~ 184 (253)
T PF10647_consen 105 VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGR 184 (253)
T ss_pred ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeC
Confidence 221 122899999999999776655 236766665433222 11122223356788999999998777665
Q ss_pred CCCe-EEE-EECCCCcEEEEccCCCCEEEEEEecCCCEEEEE
Q 002591 854 CYQS-LEL-WNMSENKTMTLTAHEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 854 ~dg~-I~v-wdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSg 893 (903)
..+. +.. +....+....+..-...+..++...+...++..
T Consensus 185 ~~~~~~~~~v~~dG~~~~~l~~~~~~~~v~a~~~~~~~~~~t 226 (253)
T PF10647_consen 185 SAGGPVVRLVSVDGGPSTPLPSVNLGVPVVAVAASPSTVYVT 226 (253)
T ss_pred CCCCceeEEEEccCCcccccCCCCCCcceEEeeCCCcEEEEE
Confidence 5542 333 444444333332223333333333333333333
No 398
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.50 E-value=0.49 Score=58.34 Aligned_cols=112 Identities=19% Similarity=0.216 Sum_probs=68.4
Q ss_pred CCEEEEEeCCCcEEEEECCCCceeEEeccCCCC--------eEEEEECC----------------CCCEEEEEeCCCcEE
Q 002591 635 GKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSL--------ITDVRFSP----------------SMPRLATSSFDKTVR 690 (903)
Q Consensus 635 g~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~--------V~~l~fsp----------------dg~~Lasgs~Dg~I~ 690 (903)
+..|++++.++.|.-.|.++++.+-.+...... +..+.+.. ++..|+.++.|+.|.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 446677777788888888888887776543211 12233321 345788888999999
Q ss_pred EEeCCCCCceeEEeccCCCceE-------------EEEecC--CCCeEEEEEeC----------CCcEEEEEcCCCeeeE
Q 002591 691 VWDADNPGYSLRTFMGHSASVM-------------SLDFHP--NKDDLICSCDG----------DGEIRYWSINNGSCTR 745 (903)
Q Consensus 691 IWDl~~~~~~~~~~~~h~~~V~-------------sl~fsp--~~~~ll~sgs~----------Dg~I~iwDi~t~~~~~ 745 (903)
-.|.++ ++.+..|.. .+.|. .+.-.| .++.++ +++. +|.|+-+|+++|+.+-
T Consensus 274 ALDA~T-Gk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VI-vG~~v~d~~~~~~~~G~I~A~Da~TGkl~W 350 (764)
T TIGR03074 274 ALDADT-GKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVV-IGGRVADNYSTDEPSGVIRAFDVNTGALVW 350 (764)
T ss_pred EEECCC-CCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEE-EEecccccccccCCCcEEEEEECCCCcEee
Confidence 999988 555554431 11110 011111 123333 4432 6889999999999888
Q ss_pred Eeec
Q 002591 746 VFKG 749 (903)
Q Consensus 746 ~~~~ 749 (903)
.+..
T Consensus 351 ~~~~ 354 (764)
T TIGR03074 351 AWDP 354 (764)
T ss_pred EEec
Confidence 7753
No 399
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=96.48 E-value=1.5 Score=46.49 Aligned_cols=238 Identities=12% Similarity=0.031 Sum_probs=127.5
Q ss_pred cCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECC--CCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 621 AST-SKVICCHFSSDGKLLATGGHDKKAVLWHTD--TLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 621 ~H~-~~V~~l~fspdg~~Latgs~Dg~V~vWd~~--t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
+|- ..|..+....+-.++..|-.--..-+|+.. +...+..+-.-.+-+.+++++.+ +.+.+..+.-++|.|+.++
T Consensus 39 ghfg~~vsavdv~~~ya~v~qG~~l~i~ditn~~~~t~~~l~~~i~~~~l~~Dv~vse~--yvyvad~ssGL~IvDIS~P 116 (370)
T COG5276 39 GHFGKGVSAVDVRGAYAYVGQGFILAILDITNVSLQTHDVLLSVINARDLFADVRVSEE--YVYVADWSSGLRIVDISTP 116 (370)
T ss_pred eeccCCcccccccccccccccCceEeeccccCcccccCcceEEEEehhhhhheeEeccc--EEEEEcCCCceEEEeccCC
Confidence 444 455555555443333333211122344433 12222223334556778888754 7777778888999999987
Q ss_pred CceeEEeccCC-CceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe---eeEEeecCcee-EEEecCCCEEEEEEcCCeE
Q 002591 698 GYSLRTFMGHS-ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS---CTRVFKGGTAQ-MRFQPHLGRYLAAAAENVV 772 (903)
Q Consensus 698 ~~~~~~~~~h~-~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~---~~~~~~~~~~~-v~~sp~~~~ll~~s~dg~I 772 (903)
..+...-.-.. +.-.++..+ |+ +++.+..|.-+.+.|+.+.. ....+...... -...-.|++-.++..|+.+
T Consensus 117 ~sP~~~~~lnt~gyaygv~vs--Gn-~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~ISGn~AYvA~~d~GL 193 (370)
T COG5276 117 DSPTLIGFLNTDGYAYGVYVS--GN-YAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAISGNYAYVAWRDGGL 193 (370)
T ss_pred CCcceeccccCCceEEEEEec--CC-EEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEecCeEEEEEeCCCe
Confidence 65543222122 444555554 44 45566656667788987654 22333322211 2233346777788899999
Q ss_pred EEEECCCCeE-EEEe-cCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEE
Q 002591 773 SILDAETQAC-RLSL-QGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLL 850 (903)
Q Consensus 773 ~i~D~~t~~~-~~~l-~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~ 850 (903)
.|.|+..... +..- ......+.++..+++..+++...+ .+.+-|....+....+..... .+.+..-.+.-.+++..
T Consensus 194 ~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~e-gvlivd~s~~ssp~~~gsyet-~~p~~~s~v~Vs~~~~Y 271 (370)
T COG5276 194 TIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYDE-GVLIVDVSGPSSPTVFGSYET-SNPVSISTVPVSGEYAY 271 (370)
T ss_pred EEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEccc-ceEEEecCCCCCceEeecccc-CCcccccceecccceee
Confidence 9999887532 2111 112336788888876666665544 466677766543333333222 22221112333455566
Q ss_pred EEECCCeEEEEECCC
Q 002591 851 VIGCYQSLELWNMSE 865 (903)
Q Consensus 851 t~s~dg~I~vwdl~~ 865 (903)
+...+..+-+.|+++
T Consensus 272 vadga~gl~~idisn 286 (370)
T COG5276 272 VADGAKGLPIIDISN 286 (370)
T ss_pred eeccccCceeEeccC
Confidence 666666666666554
No 400
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.45 E-value=0.047 Score=66.30 Aligned_cols=101 Identities=20% Similarity=0.277 Sum_probs=72.9
Q ss_pred CCCEEEEEeCCCcEEEEECCCC-ceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceE
Q 002591 634 DGKLLATGGHDKKAVLWHTDTL-KSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVM 712 (903)
Q Consensus 634 dg~~Latgs~Dg~V~vWd~~t~-~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~ 712 (903)
.+..++.|+..|.|-..|+... .....=..-.++|++++|+.+|+.++.|-.+|.|.+||+.+ ++.++.+..|..+++
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~-~k~l~~i~e~~ap~t 176 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHR-AKILKVITEHGAPVT 176 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccC-CcceeeeeecCCccc
Confidence 3457888988899998887642 22222234567899999999999999999999999999998 677888877766655
Q ss_pred EEEe---cCCCCeEEEEEeCCCcEEEEEc
Q 002591 713 SLDF---HPNKDDLICSCDGDGEIRYWSI 738 (903)
Q Consensus 713 sl~f---sp~~~~ll~sgs~Dg~I~iwDi 738 (903)
.+-+ ..++. .+++++..|. +|.+
T Consensus 177 ~vi~v~~t~~nS-~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 177 GVIFVGRTSQNS-KLLTSDTGGS--FWKL 202 (1206)
T ss_pred eEEEEEEeCCCc-EEEEccCCCc--eEEE
Confidence 5443 33333 4557766665 5554
No 401
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=96.44 E-value=1.8 Score=52.82 Aligned_cols=214 Identities=12% Similarity=0.089 Sum_probs=125.1
Q ss_pred EEEEEeCCCcEEEEeCCCCC-ceeEEeccCCCceEEEEecCCCCeEEEEEeCC--------------CcEEEEEcCCCee
Q 002591 679 RLATSSFDKTVRVWDADNPG-YSLRTFMGHSASVMSLDFHPNKDDLICSCDGD--------------GEIRYWSINNGSC 743 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~-~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~D--------------g~I~iwDi~t~~~ 743 (903)
.|+++. .+.+++.-++.-. ..++++. -......+++.+..- ++.+.+.- ..++++|-++.+.
T Consensus 686 ~l~~~~-~~~l~i~tid~iqkl~irtvp-l~~~prrI~~q~~sl-~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~v 762 (1096)
T KOG1897|consen 686 SLASAN-GGALTIGTIDEIQKLHIRTVP-LGESPRRICYQESSL-TFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEV 762 (1096)
T ss_pred eEEEec-CCceEEEEecchhhcceeeec-CCCChhheEecccce-EEEEEecccccchhhcCCcceEEEEEEecCCceeE
Confidence 444444 4557777666422 2234433 334456677776433 33333221 2367777777766
Q ss_pred eEEeec-------CceeEEEecC-CCEEEEEEc----------CCeEEEEECCCCeEEEEecC--CCCCeEEEEEcCCCC
Q 002591 744 TRVFKG-------GTAQMRFQPH-LGRYLAAAA----------ENVVSILDAETQACRLSLQG--HTKPIDSVCWDPSGE 803 (903)
Q Consensus 744 ~~~~~~-------~~~~v~~sp~-~~~ll~~s~----------dg~I~i~D~~t~~~~~~l~~--h~~~V~sl~~spdg~ 803 (903)
+..++- .+..+.|..+ +.++++|.. .|.|.+|.......+..... -.+.+.+++.- +|+
T Consensus 763 l~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngk 841 (1096)
T KOG1897|consen 763 LSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGK 841 (1096)
T ss_pred EeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCe
Confidence 654432 1223346666 456666654 47888887777433332222 23344444332 466
Q ss_pred EEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEE--ECCCCcEE--EEccCCCCEE
Q 002591 804 LLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELW--NMSENKTM--TLTAHEGLIA 879 (903)
Q Consensus 804 ~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vw--dl~~~~~~--~~~~h~~~V~ 879 (903)
+||.-+. .|++|++.+. +.++.-..+...+..+...-.++.|++|..-++|.+. +-.+|... ...-+..+++
T Consensus 842 llA~In~-~vrLye~t~~---~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmt 917 (1096)
T KOG1897|consen 842 LLAGINQ-SVRLYEWTTE---RELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMT 917 (1096)
T ss_pred EEEecCc-EEEEEEcccc---ceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCcccee
Confidence 6654332 7999998765 4455555567788889999999999999988866654 44454455 3345777888
Q ss_pred EEEEecCCCEEEEEecCCcEEE
Q 002591 880 ALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 880 sl~~spdg~~LaSgs~DG~I~I 901 (903)
++.+-.+..| +.+..+|.+++
T Consensus 918 aveil~~d~y-lgae~~gNlf~ 938 (1096)
T KOG1897|consen 918 AVEILDDDTY-LGAENSGNLFT 938 (1096)
T ss_pred eEEEecCceE-EeecccccEEE
Confidence 8888655544 44556666654
No 402
>PHA02713 hypothetical protein; Provisional
Probab=96.44 E-value=0.22 Score=59.64 Aligned_cols=176 Identities=6% Similarity=-0.000 Sum_probs=87.6
Q ss_pred CCeEEEEEeCC------CcEEEEEcCCCeeeEEe--ecCc-eeEEEecCCCEEEEEEcCC-----eEEEEECCCCeEEE-
Q 002591 720 KDDLICSCDGD------GEIRYWSINNGSCTRVF--KGGT-AQMRFQPHLGRYLAAAAEN-----VVSILDAETQACRL- 784 (903)
Q Consensus 720 ~~~ll~sgs~D------g~I~iwDi~t~~~~~~~--~~~~-~~v~~sp~~~~ll~~s~dg-----~I~i~D~~t~~~~~- 784 (903)
++.+++.|+.+ ..+..||+.+......- .... .......++..+++|+.++ .+..||..+.+-..
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~ 382 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKML 382 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEEC
Confidence 34567677753 34778898877543221 1111 1122333455566666543 58889988764332
Q ss_pred -EecCCCCCeEEEEEcCCCCEEEEEeCC------------------------eEEEEECCCCCCcceEEEeecCCCceEE
Q 002591 785 -SLQGHTKPIDSVCWDPSGELLASVSED------------------------SVRVWTVGSGSEGECVHELSCNGNKFHS 839 (903)
Q Consensus 785 -~l~~h~~~V~sl~~spdg~~lasgs~d------------------------~I~iwdl~s~~~~~~i~~~~~~~~~i~s 839 (903)
.+.........+.+ ++++.+.|+.+ .+..||..+..- ..+..+... ....
T Consensus 383 ~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W-~~v~~m~~~--r~~~ 457 (557)
T PHA02713 383 PDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIW-ETLPNFWTG--TIRP 457 (557)
T ss_pred CCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeE-eecCCCCcc--cccC
Confidence 11111111222222 46766666532 467777765421 111111111 1111
Q ss_pred EEEeCCCCEEEEEECC------CeEEEEECCC-CcEEEEc---cCCCCEEEEEEecCCCEEEEEecCC--cEEEc
Q 002591 840 CVFHPTYPSLLVIGCY------QSLELWNMSE-NKTMTLT---AHEGLIAALAVSTETGYVASASHDK--FVKLW 902 (903)
Q Consensus 840 i~~sp~g~~l~t~s~d------g~I~vwdl~~-~~~~~~~---~h~~~V~sl~~spdg~~LaSgs~DG--~I~IW 902 (903)
.+..-+++..++|+.+ ..|..||..+ ++...+. .....+..++ -++++.++|+.|| .+..|
T Consensus 458 ~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~--~~~~iyv~Gg~~~~~~~e~y 530 (557)
T PHA02713 458 GVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTIL--HDNTIMMLHCYESYMLQDTF 530 (557)
T ss_pred cEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEE--ECCEEEEEeeecceeehhhc
Confidence 1222345556666654 2578899988 5554222 2222222222 3788889999888 44444
No 403
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.40 E-value=0.0037 Score=63.43 Aligned_cols=139 Identities=14% Similarity=0.051 Sum_probs=79.2
Q ss_pred EEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCe-eeEEeec---Cce-e
Q 002591 679 RLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGS-CTRVFKG---GTA-Q 753 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~-~~~~~~~---~~~-~ 753 (903)
.|...+.||.|+-++++.-....+.-.-|..-..-+.+. . -+++|+.+|.|++|...-.- ....+.. .+. .
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~v~~~~---~-~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~ 107 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCRSERFIDEGQRVVTAS---A-KLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLG 107 (238)
T ss_pred hhccccCCcccccchhhhhhhhhhhhhhhhcceeecccC---c-eEEeecccceEEEecCCccchHHHhhhcccccceec
Confidence 344456688888887765222222222222221112222 2 34578889999999887321 1111111 111 1
Q ss_pred EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCC-CCeEEEEEcCCCCEEEEE--eCC-eEEEEECCCC
Q 002591 754 MRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHT-KPIDSVCWDPSGELLASV--SED-SVRVWTVGSG 821 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~-~~V~sl~~spdg~~lasg--s~d-~I~iwdl~s~ 821 (903)
+....++...++++.++.|+.|.+.-.+.+.....|. .++..+.....+++|+.. +.+ .++.|++...
T Consensus 108 Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 108 IPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 2222333467778889999999998888777777676 555555555556666666 555 6777777543
No 404
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.38 E-value=2 Score=46.90 Aligned_cols=267 Identities=12% Similarity=0.111 Sum_probs=119.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCceeEEec--cC---CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTD-TLKSKTNLE--EH---SSLITDVRFSPSMPRLATSSFDKTVRVWDADN 696 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~-t~~~~~~l~--~h---~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~ 696 (903)
...+.+|.|..+..-+|+|. .+.| +... -++.-.... .. .....+|.|..+ ..+++ +..+ +.+...+
T Consensus 16 ~~~l~dV~F~d~~~G~~VG~-~g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~iv-G~~g-~ll~T~D- 88 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVGA-YGTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIV-GEPG-LLLHTTD- 88 (302)
T ss_dssp SS-EEEEEESSSS-EEEEET-TTEE--EEESSTTSS-EE-----S-----EEEEEEEETT-EEEEE-EETT-EEEEESS-
T ss_pred CCceEEEEEecCCEEEEEec-CCEE--EEECCCCccccccccCCCccceeeEEEEEecCC-ceEEE-cCCc-eEEEecC-
Confidence 44899999996666666664 4543 3333 333222211 11 234677888643 34444 4455 3333333
Q ss_pred CCceeEEec---cCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE-e---ecCceeEEEecCCCEEEEEEcC
Q 002591 697 PGYSLRTFM---GHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV-F---KGGTAQMRFQPHLGRYLAAAAE 769 (903)
Q Consensus 697 ~~~~~~~~~---~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~-~---~~~~~~v~~sp~~~~ll~~s~d 769 (903)
.+..-..+. .-......+....++ ..+++ +..|.|+. ....++.-.. . .+.+..+...+++.+++++...
T Consensus 89 gG~tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~-~~~G~iy~-T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G 165 (302)
T PF14870_consen 89 GGKTWERVPLSSKLPGSPFGITALGDG-SAELA-GDRGAIYR-TTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRG 165 (302)
T ss_dssp TTSS-EE----TT-SS-EEEEEEEETT-EEEEE-ETT--EEE-ESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTS
T ss_pred CCCCcEEeecCCCCCCCeeEEEEcCCC-cEEEE-cCCCcEEE-eCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcc
Confidence 344433332 122333444444333 23323 33454432 2222322111 1 2344556667777766666555
Q ss_pred CeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECC-CCCC-cceEEEeecCCCceEEEEEeCCCC
Q 002591 770 NVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVG-SGSE-GECVHELSCNGNKFHSCVFHPTYP 847 (903)
Q Consensus 770 g~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~-s~~~-~~~i~~~~~~~~~i~si~~sp~g~ 847 (903)
..+.-||.-...-...-......|.++.|.|++.+.+++....|++=+.. ..+. .+.+..+......+..++|.++..
T Consensus 166 ~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~ 245 (302)
T PF14870_consen 166 NFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNE 245 (302)
T ss_dssp SEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-
T ss_pred cEEEEecCCCccceEEccCccceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCC
Confidence 55667776543222222335688999999999887776644477776621 1100 001111222344588999998876
Q ss_pred EEEEEECCCeEEEEECCCCcEEEEc----cCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 848 SLLVIGCYQSLELWNMSENKTMTLT----AHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 848 ~l~t~s~dg~I~vwdl~~~~~~~~~----~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
..+ ++..|.| +.....|+.-... .-...++.|.|..+.+-+|.| .||.|.-|
T Consensus 246 ~wa-~gg~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG-~~G~ll~~ 301 (302)
T PF14870_consen 246 IWA-VGGSGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG-QDGVLLRY 301 (302)
T ss_dssp EEE-EESTT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred EEE-EeCCccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC-CCcEEEEe
Confidence 555 5555543 4455566554322 235568889997665555555 78887655
No 405
>PRK13684 Ycf48-like protein; Provisional
Probab=96.37 E-value=2.3 Score=47.43 Aligned_cols=267 Identities=10% Similarity=0.069 Sum_probs=131.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEEC-CCCceeEEec----cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHT-DTLKSKTNLE----EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~-~t~~~~~~l~----~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
...+++|+|.....-+|+|. +|.| |.. +.++.-.... .....+.+|.|..+ ..+++ +..+. ||..++.
T Consensus 45 ~~~l~~v~F~d~~~g~avG~-~G~i--l~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~~-G~~g~--i~~S~Dg 117 (334)
T PRK13684 45 EANLLDIAFTDPNHGWLVGS-NRTL--LETNDGGETWEERSLDLPEENFRLISISFKGD-EGWIV-GQPSL--LLHTTDG 117 (334)
T ss_pred CCceEEEEEeCCCcEEEEEC-CCEE--EEEcCCCCCceECccCCcccccceeeeEEcCC-cEEEe-CCCce--EEEECCC
Confidence 55899999986666677664 4533 332 2222222211 12344778888754 34444 44443 3333433
Q ss_pred CceeEEecc---CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe----ecCceeEEEecCCCEEEEEEcCC
Q 002591 698 GYSLRTFMG---HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF----KGGTAQMRFQPHLGRYLAAAAEN 770 (903)
Q Consensus 698 ~~~~~~~~~---h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~----~~~~~~v~~sp~~~~ll~~s~dg 770 (903)
++....+.. .......+..... ..++ .++..|.|..=+ ..++.-..+ .+....+.+.+++ .+++.+..|
T Consensus 118 G~tW~~~~~~~~~~~~~~~i~~~~~-~~~~-~~g~~G~i~~S~-DgG~tW~~~~~~~~g~~~~i~~~~~g-~~v~~g~~G 193 (334)
T PRK13684 118 GKNWTRIPLSEKLPGSPYLITALGP-GTAE-MATNVGAIYRTT-DGGKNWEALVEDAAGVVRNLRRSPDG-KYVAVSSRG 193 (334)
T ss_pred CCCCeEccCCcCCCCCceEEEEECC-Ccce-eeeccceEEEEC-CCCCCceeCcCCCcceEEEEEECCCC-eEEEEeCCc
Confidence 433333210 1111122222212 2233 233344443222 122221111 2345567777764 455666666
Q ss_pred eEEEE-ECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEe-ecCCCceEEEEEeCCCCE
Q 002591 771 VVSIL-DAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHEL-SCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 771 ~I~i~-D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~-~~~~~~i~si~~sp~g~~ 848 (903)
.+..- |.....-......-...++++.+.+++.+++++..+.+++=....+.....+..- ......+..+.+.+++.
T Consensus 194 ~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~- 272 (334)
T PRK13684 194 NFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGE- 272 (334)
T ss_pred eEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCC-
Confidence 55542 2221112222223456789999999999887776665432223333222211110 11124577888988776
Q ss_pred EEEEECCCeEEEEECCCCcEEE-Ec---cCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 849 LLVIGCYQSLELWNMSENKTMT-LT---AHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 849 l~t~s~dg~I~vwdl~~~~~~~-~~---~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+++++.+|.|.. ....++... .. .-....+.+.|..+++.+++ +..|.|-.|+
T Consensus 273 ~~~~G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~~G~il~~~ 329 (334)
T PRK13684 273 IWAGGGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVL-GQRGVLLRYV 329 (334)
T ss_pred EEEEcCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEE-CCCceEEEec
Confidence 556666776653 445554432 21 22345788888777776665 4677776653
No 406
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.33 E-value=2 Score=48.59 Aligned_cols=102 Identities=19% Similarity=0.205 Sum_probs=58.4
Q ss_pred CCeEEEEEcCCCCEEEEEe-----------CCC-cEEEEECC--CCc--eeEEeccCCCCeEEEEECCCCCEEEEEeCCC
Q 002591 624 SKVICCHFSSDGKLLATGG-----------HDK-KAVLWHTD--TLK--SKTNLEEHSSLITDVRFSPSMPRLATSSFDK 687 (903)
Q Consensus 624 ~~V~~l~fspdg~~Latgs-----------~Dg-~V~vWd~~--t~~--~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg 687 (903)
.....|+|.++|+++++-. ..+ .|.+++-. .++ ....+.......+.|+|.+++ |++++.+.
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCCCe
Confidence 4678899999998777643 223 67777643 233 234444444557889999988 44445454
Q ss_pred cEEEEeCCCCC----c---eeEEecc----CCCceEEEEecCCCCeEEEEE
Q 002591 688 TVRVWDADNPG----Y---SLRTFMG----HSASVMSLDFHPNKDDLICSC 727 (903)
Q Consensus 688 ~I~IWDl~~~~----~---~~~~~~~----h~~~V~sl~fsp~~~~ll~sg 727 (903)
.+++.|.+..+ + .+..+.. +......++|.|++..++..+
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 33444654322 1 1122222 123467789999876444333
No 407
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=96.30 E-value=2.9 Score=47.74 Aligned_cols=110 Identities=12% Similarity=0.111 Sum_probs=66.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcc--eEEEeec--CCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 789 HTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGE--CVHELSC--NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 789 h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~--~i~~~~~--~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
....+.++.|.+++.+++++..+.+ +|....+.... .+..... ....+..+.|.+++. +++++..|.|.... .
T Consensus 279 ~~~~l~~v~~~~dg~l~l~g~~G~l-~~S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~-~~a~G~~G~v~~s~-D 355 (398)
T PLN00033 279 SARRIQNMGWRADGGLWLLTRGGGL-YVSKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKE-AWAAGGSGILLRST-D 355 (398)
T ss_pred CccceeeeeEcCCCCEEEEeCCceE-EEecCCCCcccccceeecccCCCCcceEEEEEcCCCc-EEEEECCCcEEEeC-C
Confidence 3456889999999998877765543 33333332111 2222221 223588888887765 66677777666654 4
Q ss_pred CCcEEEE----ccCCCCEEEEEEecCCCEEEEEecCCcEEEc
Q 002591 865 ENKTMTL----TAHEGLIAALAVSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 865 ~~~~~~~----~~h~~~V~sl~~spdg~~LaSgs~DG~I~IW 902 (903)
.++.... ..-...++.+.|..+++.+++| .+|.|.-|
T Consensus 356 ~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 356 GGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred CCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence 4544322 2334578899998777766665 68877655
No 408
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.28 E-value=0.017 Score=66.23 Aligned_cols=79 Identities=22% Similarity=0.253 Sum_probs=67.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceE-EEEecCCCCeEEEEEeCCCcEEEEEcCCCee
Q 002591 665 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVM-SLDFHPNKDDLICSCDGDGEIRYWSINNGSC 743 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~-sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~ 743 (903)
...|.-+.|+|.-.+||++..+|.|.++.+. ...+.++.-|...++ +++|.|||+ +++.|-.||+|++.|++++..
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n--~qRlwtip~p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~Dve~~~~ 96 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN--WQRLWTIPIPGENVTASLCWRPDGK-LLAVGFKDGTIRLHDVEKGGR 96 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec--cceeEeccCCCCccceeeeecCCCC-EEEEEecCCeEEEEEccCCCc
Confidence 3457889999999999999999999999887 455677776777777 999999965 788999999999999999887
Q ss_pred eEE
Q 002591 744 TRV 746 (903)
Q Consensus 744 ~~~ 746 (903)
+..
T Consensus 97 l~~ 99 (665)
T KOG4640|consen 97 LVS 99 (665)
T ss_pred eec
Confidence 655
No 409
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=96.19 E-value=3.3 Score=47.37 Aligned_cols=222 Identities=10% Similarity=0.136 Sum_probs=120.5
Q ss_pred CCEEEEEeCCCcEEEEeCCCCCce---eEEeccCCCceEEEEecC---C-CCeEEEEEeCCCcEEEEEcCCC--e-----
Q 002591 677 MPRLATSSFDKTVRVWDADNPGYS---LRTFMGHSASVMSLDFHP---N-KDDLICSCDGDGEIRYWSINNG--S----- 742 (903)
Q Consensus 677 g~~Lasgs~Dg~I~IWDl~~~~~~---~~~~~~h~~~V~sl~fsp---~-~~~ll~sgs~Dg~I~iwDi~t~--~----- 742 (903)
...|++|+..|.++||+....+.. +..-..-..+|..|..-. . ....| +.-.-..+.||.+... .
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~L-aVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQL-AVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceE-EEecCCEEEEEEEEecCCCcccCc
Confidence 458999999999999998653311 222223456777776532 2 22233 3344677788877321 1
Q ss_pred ---eeEEee----cCceeEEEecCC-----CEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC
Q 002591 743 ---CTRVFK----GGTAQMRFQPHL-----GRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE 810 (903)
Q Consensus 743 ---~~~~~~----~~~~~v~~sp~~-----~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~ 810 (903)
....++ .....+++-+-+ ..+.+=+.||.+.+|+-+.....+.+.. ----..++|.+.-+.|++++.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASS 194 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecC
Confidence 111111 222334443332 4566678899999999887765555543 112234578888888888888
Q ss_pred C-eEEEEECCCC--------------------CCcceEEEeecCCCceEEEE---EeCCCCEEEEEECCCeEEEEECCCC
Q 002591 811 D-SVRVWTVGSG--------------------SEGECVHELSCNGNKFHSCV---FHPTYPSLLVIGCYQSLELWNMSEN 866 (903)
Q Consensus 811 d-~I~iwdl~s~--------------------~~~~~i~~~~~~~~~i~si~---~sp~g~~l~t~s~dg~I~vwdl~~~ 866 (903)
+ .|..|....- +....-..+.. +..+..+. ++.....|++-+ ..++.+.+.. |
T Consensus 195 s~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~nl-GE~~l~i~v~~~~~~~~~IvvLg-er~Lf~l~~~-G 271 (418)
T PF14727_consen 195 SWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSFNL-GEQALDIQVVRFSSSESDIVVLG-ERSLFCLKDN-G 271 (418)
T ss_pred ceeEEEecHHHhhhccccccccccccccccccccccceeEEEC-CceeEEEEEEEcCCCCceEEEEe-cceEEEEcCC-C
Confidence 7 8888876321 11111112221 22333333 333333344443 4566666664 4
Q ss_pred cEEEEccCCCCEEEEE-Ee----cCC---CEEEEEecCCcEEEcC
Q 002591 867 KTMTLTAHEGLIAALA-VS----TET---GYVASASHDKFVKLWK 903 (903)
Q Consensus 867 ~~~~~~~h~~~V~sl~-~s----pdg---~~LaSgs~DG~I~IWd 903 (903)
.+......+....|++ |. .++ ..++.+++++.+.||+
T Consensus 272 ~l~~~krLd~~p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~ 316 (418)
T PF14727_consen 272 SLRFQKRLDYNPSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYE 316 (418)
T ss_pred eEEEEEecCCceeeEEEEEeecccCCCCceEEEEEecCCeEEEEe
Confidence 4443333333333332 21 122 2488899999999884
No 410
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=96.18 E-value=2.1 Score=45.05 Aligned_cols=238 Identities=12% Similarity=0.026 Sum_probs=145.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEe
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTF 704 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~ 704 (903)
.-..|+-.+||..-+++...+.|--.|-.+++....--+....-..|..-||+..-++-+.. -|.-.|-++.......+
T Consensus 63 ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~l 141 (353)
T COG4257 63 APFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPL 141 (353)
T ss_pred CccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeec
Confidence 45678888999988998888888888988998887776766677788888998877765443 35555555422222222
Q ss_pred c--cCCCceEEEEecCCCCeEEEEEeC---------CCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEE
Q 002591 705 M--GHSASVMSLDFHPNKDDLICSCDG---------DGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVS 773 (903)
Q Consensus 705 ~--~h~~~V~sl~fsp~~~~ll~sgs~---------Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~ 773 (903)
. .-........|.+.|...| ++.. .+.|++|+...+ .....+|..|++...++.-.++.|.
T Consensus 142 p~~~a~~nlet~vfD~~G~lWF-t~q~G~yGrLdPa~~~i~vfpaPqG-------~gpyGi~atpdGsvwyaslagnaia 213 (353)
T COG4257 142 PLEHADANLETAVFDPWGNLWF-TGQIGAYGRLDPARNVISVFPAPQG-------GGPYGICATPDGSVWYASLAGNAIA 213 (353)
T ss_pred ccccCCCcccceeeCCCccEEE-eeccccceecCcccCceeeeccCCC-------CCCcceEECCCCcEEEEeccccceE
Confidence 1 2234566788888876444 6542 123444443322 2456789999999988888888898
Q ss_pred EEECCCCeEEEEe--cCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEE
Q 002591 774 ILDAETQACRLSL--QGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLL 850 (903)
Q Consensus 774 i~D~~t~~~~~~l--~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~ 850 (903)
..|..++.....- .........+--+|-|..-++.... .+..||-.... ..-..+.+....-.++.....++..+
T Consensus 214 ridp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s--W~eypLPgs~arpys~rVD~~grVW~ 291 (353)
T COG4257 214 RIDPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS--WIEYPLPGSKARPYSMRVDRHGRVWL 291 (353)
T ss_pred EcccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc--ceeeeCCCCCCCcceeeeccCCcEEe
Confidence 8888877322111 1112234445556667766654444 67777765431 22233333344445555555555444
Q ss_pred EEECCCeEEEEECCCCcEEEEcc
Q 002591 851 VIGCYQSLELWNMSENKTMTLTA 873 (903)
Q Consensus 851 t~s~dg~I~vwdl~~~~~~~~~~ 873 (903)
.-...+.|.-||-++.....+..
T Consensus 292 sea~agai~rfdpeta~ftv~p~ 314 (353)
T COG4257 292 SEADAGAIGRFDPETARFTVLPI 314 (353)
T ss_pred eccccCceeecCcccceEEEecC
Confidence 44445667777776665554443
No 411
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=96.15 E-value=1.8 Score=48.54 Aligned_cols=186 Identities=17% Similarity=0.180 Sum_probs=111.4
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEEC----CCCCE--EEEEeC-C---CcEEEEeCCCCCceeE
Q 002591 633 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS----PSMPR--LATSSF-D---KTVRVWDADNPGYSLR 702 (903)
Q Consensus 633 pdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fs----pdg~~--Lasgs~-D---g~I~IWDl~~~~~~~~ 702 (903)
|...+|+...+++-+.+||++ |+.+..+.. +.++.|... -+++. |+.++. + .+|++|.++.....+.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~ 142 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLD-GKELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELT 142 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETT-S-EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEE
T ss_pred cccceEEEEeCCCCEEEEcCC-CcEEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcce
Confidence 344577777888889999986 566666642 334444332 13332 444443 2 4699998864223344
Q ss_pred Eecc-------CCCceEEEEec--C-CCCeEEEEEeCCCcEEEEEcC---CC----eeeEEeec--CceeEEEecCCCEE
Q 002591 703 TFMG-------HSASVMSLDFH--P-NKDDLICSCDGDGEIRYWSIN---NG----SCTRVFKG--GTAQMRFQPHLGRY 763 (903)
Q Consensus 703 ~~~~-------h~~~V~sl~fs--p-~~~~ll~sgs~Dg~I~iwDi~---t~----~~~~~~~~--~~~~v~~sp~~~~l 763 (903)
.+.. ....++.+|+. + ++..+++....+|.+..|.+. .+ +.++.|.. .+..|......+.+
T Consensus 143 ~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~L 222 (381)
T PF02333_consen 143 DVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRL 222 (381)
T ss_dssp E-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEE
T ss_pred EcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCE
Confidence 3322 12347778874 3 355667778889999888774 23 35666654 45667888888999
Q ss_pred EEEEcCCeEEEEECCC-----CeEEEEecC--CCCCeEEEEEc--CCCC-EEEEEeCC--eEEEEECCCC
Q 002591 764 LAAAAENVVSILDAET-----QACRLSLQG--HTKPIDSVCWD--PSGE-LLASVSED--SVRVWTVGSG 821 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t-----~~~~~~l~~--h~~~V~sl~~s--pdg~-~lasgs~d--~I~iwdl~s~ 821 (903)
+++-.+--|.-|+.+- +..+....+ ....|..|++- .+++ ||++.+.+ +..||+....
T Consensus 223 YvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 223 YVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred EEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 9999999999998762 233333322 34567788774 3454 67766665 8999998754
No 412
>smart00667 LisH Lissencephaly type-1-like homology motif. Alpha-helical motif present in Lis1, treacle, Nopp140, some katanin p60 subunits, muskelin, tonneau, LEUNIG and numerous WD40 repeat-containing proteins. It is suggested that LisH motifs contribute to the regulation of microtubule dynamics, either by mediating dimerisation, or else by binding cytoplasmic dynein heavy chain or microtubules directly.
Probab=96.11 E-value=0.0086 Score=42.09 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHhccHHHHHHHHHhcCCCC
Q 002591 9 DKMLDVYIHDYLVKRDLKASAQAFQAEGKVS 39 (903)
Q Consensus 9 ~~~l~~yiydyl~~~~~~~~a~a~~~e~~~~ 39 (903)
++.|+..|++||.+.|+.++|++|..|..+.
T Consensus 3 ~~~l~~lI~~yL~~~g~~~ta~~l~~e~~~~ 33 (34)
T smart00667 3 RSELNRLILEYLLRNGYEETAETLQKESGLS 33 (34)
T ss_pred HHHHHHHHHHHHHHcCHHHHHHHHHHHhCCC
Confidence 5668999999999999999999999997654
No 413
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.07 E-value=0.49 Score=49.87 Aligned_cols=169 Identities=18% Similarity=0.194 Sum_probs=108.7
Q ss_pred cCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEE-cCC-eEEEEECCCCeEEEEecCCCCC--
Q 002591 717 HPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAA-AEN-VVSILDAETQACRLSLQGHTKP-- 792 (903)
Q Consensus 717 sp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s-~dg-~I~i~D~~t~~~~~~l~~h~~~-- 792 (903)
..++.+.+++.+++|.|..- ..+......+.++|....-++-. .-| ...+||........++...+..
T Consensus 44 ~~dgs~g~a~~~eaGk~v~~--------~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHf 115 (366)
T COG3490 44 ARDGSFGAATLSEAGKIVFA--------TALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHF 115 (366)
T ss_pred ccCCceeEEEEccCCceeee--------eecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCcee
Confidence 44556566666666554211 11222344567777765544433 334 4677888877655544332221
Q ss_pred eEEEEEcCCCCEEEEEeCC------eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEEC------C-----
Q 002591 793 IDSVCWDPSGELLASVSED------SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGC------Y----- 855 (903)
Q Consensus 793 V~sl~~spdg~~lasgs~d------~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~------d----- 855 (903)
.-.-+|++||.+|+..-.| .|-|||.+. ....+-++..|.-....+.+.+||+.++++.. |
T Consensus 116 yGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~--~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~ 193 (366)
T COG3490 116 YGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE--GFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTE 193 (366)
T ss_pred ecccccCCCCcEEEeecCCCCCCCceEEEEeccc--ccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccc
Confidence 2234799999999877554 489999984 35677788888888899999999999888754 1
Q ss_pred -------CeEEEEECCCCcEE---EEc--cCCCCEEEEEEecCCCEEEEEec
Q 002591 856 -------QSLELWNMSENKTM---TLT--AHEGLIAALAVSTETGYVASASH 895 (903)
Q Consensus 856 -------g~I~vwdl~~~~~~---~~~--~h~~~V~sl~~spdg~~LaSgs~ 895 (903)
-++.+.|..++.++ ++. .+.-.|..++..+||..++.+-.
T Consensus 194 lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy 245 (366)
T COG3490 194 LNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQY 245 (366)
T ss_pred cchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEe
Confidence 14556676666665 333 35567889999999887766543
No 414
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.04 E-value=0.39 Score=53.50 Aligned_cols=120 Identities=16% Similarity=0.175 Sum_probs=86.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCce----eEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 002591 622 STSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS----KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNP 697 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~----~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~ 697 (903)
..++|.+|.||+|.+.||+--.|++|.+++....+. ..+.+..+..|...+|+.+ .-+|.....| +.+|-+...
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchh
Confidence 466999999999999999999999999999742222 2223345566999999876 5566666555 888888776
Q ss_pred CceeEEeccCCCceEEEEecCCCCeEEEEEe-CCCcEEEEEcCCCee
Q 002591 698 GYSLRTFMGHSASVMSLDFHPNKDDLICSCD-GDGEIRYWSINNGSC 743 (903)
Q Consensus 698 ~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs-~Dg~I~iwDi~t~~~ 743 (903)
...++..+.|...|....|.++..-++.+.+ ..+++.=+-++++..
T Consensus 143 krslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~v 189 (657)
T KOG2377|consen 143 KRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGTM 189 (657)
T ss_pred hhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeecee
Confidence 6778888889999999999998765544443 344444455555443
No 415
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=95.98 E-value=3.2 Score=45.40 Aligned_cols=220 Identities=13% Similarity=0.127 Sum_probs=104.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEecc--C---CCceEEEEecCCCCeEEEEEeCCCcEEEEEcC
Q 002591 665 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMG--H---SASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 739 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~--h---~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~ 739 (903)
...+.+|.|..+..-+++|. .+. |+...+.++.-..... . .....+|.|.. ...+++| ..+ +.+....
T Consensus 16 ~~~l~dV~F~d~~~G~~VG~-~g~--il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~--~~g~ivG-~~g-~ll~T~D 88 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVGA-YGT--ILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDG--NEGWIVG-EPG-LLLHTTD 88 (302)
T ss_dssp SS-EEEEEESSSS-EEEEET-TTE--EEEESSTTSS-EE-----S-----EEEEEEEET--TEEEEEE-ETT-EEEEESS
T ss_pred CCceEEEEEecCCEEEEEec-CCE--EEEECCCCccccccccCCCccceeeEEEEEecC--CceEEEc-CCc-eEEEecC
Confidence 45789999996565666655 453 4444444443322221 1 12366777764 3344444 344 3344444
Q ss_pred CCeeeEEe------ecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-e
Q 002591 740 NGSCTRVF------KGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED-S 812 (903)
Q Consensus 740 t~~~~~~~------~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~ 812 (903)
.++.-..+ .+....+....+ +..++++..|.|+.-.-.-..-..........+..+..++||.+++++..+ .
T Consensus 89 gG~tW~~v~l~~~lpgs~~~i~~l~~-~~~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~ 167 (302)
T PF14870_consen 89 GGKTWERVPLSSKLPGSPFGITALGD-GSAELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNF 167 (302)
T ss_dssp TTSS-EE----TT-SS-EEEEEEEET-TEEEEEETT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSE
T ss_pred CCCCcEEeecCCCCCCCeeEEEEcCC-CcEEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccE
Confidence 44422221 122222333333 233444444444332211112222334455778889999999999999888 6
Q ss_pred EEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEE-CCCCcEEE---Ec--cCCCCEEEEEEecC
Q 002591 813 VRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWN-MSENKTMT---LT--AHEGLIAALAVSTE 886 (903)
Q Consensus 813 I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwd-l~~~~~~~---~~--~h~~~V~sl~~spd 886 (903)
+.-||-... .-..+. ......|..+.|.+++...+ ....+.|++=+ ....+... .. ...-.+.+++|.++
T Consensus 168 ~~s~~~G~~--~w~~~~-r~~~~riq~~gf~~~~~lw~-~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~ 243 (302)
T PF14870_consen 168 YSSWDPGQT--TWQPHN-RNSSRRIQSMGFSPDGNLWM-LARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPP 243 (302)
T ss_dssp EEEE-TT-S--S-EEEE---SSS-EEEEEE-TTS-EEE-EETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSS
T ss_pred EEEecCCCc--cceEEc-cCccceehhceecCCCCEEE-EeCCcEEEEccCCCCccccccccCCcccCceeeEEEEecCC
Confidence 677875421 111222 22367899999999977555 45888888887 22222221 11 12234889999998
Q ss_pred CCEEEEEecC
Q 002591 887 TGYVASASHD 896 (903)
Q Consensus 887 g~~LaSgs~D 896 (903)
+...++|+..
T Consensus 244 ~~~wa~gg~G 253 (302)
T PF14870_consen 244 NEIWAVGGSG 253 (302)
T ss_dssp S-EEEEESTT
T ss_pred CCEEEEeCCc
Confidence 8888776644
No 416
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=95.92 E-value=4.1 Score=46.14 Aligned_cols=149 Identities=14% Similarity=0.119 Sum_probs=87.0
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCceeEEeccC--CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCC-C
Q 002591 633 SDGKLLATGGHDKKAVLWHTDTLKSKTNLEEH--SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHS-A 709 (903)
Q Consensus 633 pdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h--~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~-~ 709 (903)
.++ .++++..||.|.-.|.+++..+.....- ...+.+-.+..+|+ |+.++.++.++.+|.++ +..+..+.... .
T Consensus 67 ~dg-~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~-G~~~W~~~~~~~~ 143 (370)
T COG1520 67 GDG-TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDAST-GTLVWSRNVGGSP 143 (370)
T ss_pred eCC-eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCC-CcEEEEEecCCCe
Confidence 344 4455577888888888887765433322 12333333333564 78888899888888875 55565555444 1
Q ss_pred ceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCc-ee--EEE--ecCCCEEEEEEc--CCeEEEEECCCCeE
Q 002591 710 SVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGT-AQ--MRF--QPHLGRYLAAAA--ENVVSILDAETQAC 782 (903)
Q Consensus 710 ~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~-~~--v~~--sp~~~~ll~~s~--dg~I~i~D~~t~~~ 782 (903)
.+..-....++ .++.++.++.+...|..+++.+..+.... .. +.. ....+.++.+.. ++.+.-+|.+++..
T Consensus 144 ~~~~~~v~~~~--~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~vy~~~~~~~~~~~a~~~~~G~~ 221 (370)
T COG1520 144 YYASPPVVGDG--TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGTVYVGSDGYDGILYALNAEDGTL 221 (370)
T ss_pred EEecCcEEcCc--EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecceEEEecCCCcceEEEEEccCCcE
Confidence 12222222222 34445578999999999888766654322 11 111 123355555555 56788888888877
Q ss_pred EEEe
Q 002591 783 RLSL 786 (903)
Q Consensus 783 ~~~l 786 (903)
+...
T Consensus 222 ~w~~ 225 (370)
T COG1520 222 KWSQ 225 (370)
T ss_pred eeee
Confidence 7664
No 417
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=95.68 E-value=3.7 Score=51.33 Aligned_cols=177 Identities=14% Similarity=0.193 Sum_probs=102.2
Q ss_pred cCCCCeEEEEEC---C--C--CCEEEEEeCCCcEEEEeC------CCCC--------ceeEEecc---CCCceEEEEecC
Q 002591 663 EHSSLITDVRFS---P--S--MPRLATSSFDKTVRVWDA------DNPG--------YSLRTFMG---HSASVMSLDFHP 718 (903)
Q Consensus 663 ~h~~~V~~l~fs---p--d--g~~Lasgs~Dg~I~IWDl------~~~~--------~~~~~~~~---h~~~V~sl~fsp 718 (903)
....+|..|+|. . + .++|++ -....+.|+.. .... .++..+.. ...+..+++|+|
T Consensus 77 ~~~~PI~qI~fa~~~~~~~~~~~~l~V-rt~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP 155 (765)
T PF10214_consen 77 DDGSPIKQIKFATLSESFDEKSRWLAV-RTETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNP 155 (765)
T ss_pred CCCCCeeEEEecccccccCCcCcEEEE-EcCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEecc
Confidence 466788888887 2 1 224444 34555666661 1100 12233321 234567899999
Q ss_pred CCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEE
Q 002591 719 NKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCW 798 (903)
Q Consensus 719 ~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~ 798 (903)
....-||..+..|...|||+......+ .. ..-+.....|.| ++|... .+....|+|
T Consensus 156 ~~~~q~AiVD~~G~Wsvw~i~~~~~~~---~~----------~~~~~~~~~gsi-~~d~~e----------~s~w~rI~W 211 (765)
T PF10214_consen 156 WDQRQFAIVDEKGNWSVWDIKGRPKRK---SS----------NLRLSRNISGSI-IFDPEE----------LSNWKRILW 211 (765)
T ss_pred CccceEEEEeccCcEEEEEeccccccC---Cc----------ceeeccCCCccc-cCCCcc----------cCcceeeEe
Confidence 877788899999999999992211110 00 011111122333 333221 145568899
Q ss_pred cCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCC
Q 002591 799 DPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSE 865 (903)
Q Consensus 799 spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~ 865 (903)
..+...|+.++...+.++|+.+......+. .......|..+.-++.....+..-....|..+|+..
T Consensus 212 ~~~~~~lLv~~r~~l~~~d~~~~~~~~~l~-~~~~~~~IlDv~~~~~~~~~~FiLTs~eiiw~~~~~ 277 (765)
T PF10214_consen 212 VSDSNRLLVCNRSKLMLIDFESNWQTEYLV-TAKTWSWILDVKRSPDNPSHVFILTSKEIIWLDVKS 277 (765)
T ss_pred cCCCCEEEEEcCCceEEEECCCCCccchhc-cCCChhheeeEEecCCccceEEEEecCeEEEEEccC
Confidence 988888888888899999998765433222 222356688888777633222222346677777766
No 418
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=95.63 E-value=1.1 Score=55.15 Aligned_cols=66 Identities=14% Similarity=0.089 Sum_probs=45.1
Q ss_pred EEEEEeCCCcEEEEEcCCCeeeEEeecCce---------------eEEEec--CCCEEEEEEc----------CCeEEEE
Q 002591 723 LICSCDGDGEIRYWSINNGSCTRVFKGGTA---------------QMRFQP--HLGRYLAAAA----------ENVVSIL 775 (903)
Q Consensus 723 ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~---------------~v~~sp--~~~~ll~~s~----------dg~I~i~ 775 (903)
.|+.++.|+.|.-.|.++|+.+..|..... .+...| .++.+++++. +|.|+-|
T Consensus 262 rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~ 341 (764)
T TIGR03074 262 RIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAF 341 (764)
T ss_pred EEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEE
Confidence 344777899999999999998876532100 011111 2456777643 5889999
Q ss_pred ECCCCeEEEEecC
Q 002591 776 DAETQACRLSLQG 788 (903)
Q Consensus 776 D~~t~~~~~~l~~ 788 (903)
|.++|+.+..+..
T Consensus 342 Da~TGkl~W~~~~ 354 (764)
T TIGR03074 342 DVNTGALVWAWDP 354 (764)
T ss_pred ECCCCcEeeEEec
Confidence 9999999988763
No 419
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=95.49 E-value=0.031 Score=56.88 Aligned_cols=134 Identities=13% Similarity=0.052 Sum_probs=75.9
Q ss_pred EEEeCCCcEEEEECCCCceeE-EeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEec
Q 002591 639 ATGGHDKKAVLWHTDTLKSKT-NLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFH 717 (903)
Q Consensus 639 atgs~Dg~V~vWd~~t~~~~~-~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fs 717 (903)
...+.||.|+-+++...+... .-..|...-. ...-+..|++|+.+|.|.+|...-.+.....+..-...|.++.-.
T Consensus 34 ~~~sa~~~v~~~~~~k~k~s~rse~~~~e~~~---v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~ 110 (238)
T KOG2444|consen 34 RATSADGLVRERKVRKHKESCRSERFIDEGQR---VVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPN 110 (238)
T ss_pred ccccCCcccccchhhhhhhhhhhhhhhhccee---ecccCceEEeecccceEEEecCCccchHHHhhhcccccceecccc
Confidence 334567777777765322211 1111222211 122345799999999999998874444433333334445444333
Q ss_pred CCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCC
Q 002591 718 PNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQ 780 (903)
Q Consensus 718 p~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~ 780 (903)
-+...+.+++..||.||.|++.-.+.+.....+.. ..+..+++.++++.|.+|++...
T Consensus 111 ~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~-----~~~e~~ivv~sd~~i~~a~~S~d 168 (238)
T KOG2444|consen 111 GRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNF-----ESGEELIVVGSDEFLKIADTSHD 168 (238)
T ss_pred ccccceeEEeccCCceeeeccccCceeeeeccccC-----CCcceeEEecCCceEEeeccccc
Confidence 33334888999999999999988776654432221 23345555555666666654443
No 420
>PLN02153 epithiospecifier protein
Probab=95.44 E-value=1.4 Score=49.29 Aligned_cols=174 Identities=9% Similarity=-0.000 Sum_probs=80.5
Q ss_pred CeEEEEEeCC-----CcEEEEEcCCCeeeEEee-------cC-ceeEEEecCCCEEEEEEcC-----------CeEEEEE
Q 002591 721 DDLICSCDGD-----GEIRYWSINNGSCTRVFK-------GG-TAQMRFQPHLGRYLAAAAE-----------NVVSILD 776 (903)
Q Consensus 721 ~~ll~sgs~D-----g~I~iwDi~t~~~~~~~~-------~~-~~~v~~sp~~~~ll~~s~d-----------g~I~i~D 776 (903)
+.+++.|+.+ ..|.+||+.+.+....-. .. ........++..++.++.+ ..|.+||
T Consensus 86 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd 165 (341)
T PLN02153 86 TKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYN 165 (341)
T ss_pred CEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEE
Confidence 4566677653 357889988765443211 01 1112222334455555543 2577889
Q ss_pred CCCCeEEEEecC----CCCCeEEEEEcCCCCEEEEEeC--------------CeEEEEECCCCCCcceEEEee--cCCCc
Q 002591 777 AETQACRLSLQG----HTKPIDSVCWDPSGELLASVSE--------------DSVRVWTVGSGSEGECVHELS--CNGNK 836 (903)
Q Consensus 777 ~~t~~~~~~l~~----h~~~V~sl~~spdg~~lasgs~--------------d~I~iwdl~s~~~~~~i~~~~--~~~~~ 836 (903)
.++.+-...-.. ....-.+++. -++++++.++. +.|.+||+.+..- ..+.... .....
T Consensus 166 ~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W-~~~~~~g~~P~~r~ 243 (341)
T PLN02153 166 IADGKWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKW-TEVETTGAKPSARS 243 (341)
T ss_pred CCCCeEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCccceecCceEEEEcCCCcE-EeccccCCCCCCcc
Confidence 887643321110 0111112222 24565554331 2588888876421 1111110 00111
Q ss_pred eEEEEEeCCCCEEEEEECC--------------CeEEEEECCCCcEEEEccC------CCC--EEEEEEecCCCEEEEEe
Q 002591 837 FHSCVFHPTYPSLLVIGCY--------------QSLELWNMSENKTMTLTAH------EGL--IAALAVSTETGYVASAS 894 (903)
Q Consensus 837 i~si~~sp~g~~l~t~s~d--------------g~I~vwdl~~~~~~~~~~h------~~~--V~sl~~spdg~~LaSgs 894 (903)
..+++ .-++..++.|+.. +.|+.||..+.+...+... ... ..++.+.-++++++.|+
T Consensus 244 ~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~~W~~~~~~~~~~~pr~~~~~~~~~v~~~~~~~~~gG 322 (341)
T PLN02153 244 VFAHA-VVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETLVWEKLGECGEPAMPRGWTAYTTATVYGKNGLLMHGG 322 (341)
T ss_pred eeeeE-EECCEEEEECcccCCccccccccccccccEEEEEcCccEEEeccCCCCCCCCCccccccccccCCcceEEEEcC
Confidence 12222 2245666666641 2688889887765543311 111 22333444556777777
Q ss_pred cCC
Q 002591 895 HDK 897 (903)
Q Consensus 895 ~DG 897 (903)
.++
T Consensus 323 ~~~ 325 (341)
T PLN02153 323 KLP 325 (341)
T ss_pred cCC
Confidence 643
No 421
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=95.41 E-value=1 Score=52.01 Aligned_cols=146 Identities=11% Similarity=0.215 Sum_probs=91.4
Q ss_pred CCCeEEEEECCCCCEEEEEe--CCCcEEEEeCCCCCceeEEeccCCCceEEEEecCC----CCeEEEEEeCCCcEEEEEc
Q 002591 665 SSLITDVRFSPSMPRLATSS--FDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPN----KDDLICSCDGDGEIRYWSI 738 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs--~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~----~~~ll~sgs~Dg~I~iwDi 738 (903)
-.+|..++|......+++.- .+|.+++=|- ..+. .-..|..+.|.|- ...++ +.-....|.+|-+
T Consensus 19 iHPvhGlaWTDGkqVvLT~L~l~~gE~kfGds----~viG----qFEhV~GlsW~P~~~~~~paLL-AVQHkkhVtVWqL 89 (671)
T PF15390_consen 19 IHPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS----KVIG----QFEHVHGLSWAPPCTADTPALL-AVQHKKHVTVWQL 89 (671)
T ss_pred hccccceEecCCCEEEEEeeeeeCCccccCCc----cEee----ccceeeeeeecCcccCCCCceE-EEeccceEEEEEe
Confidence 45688999984444445442 2444443322 2233 3345889999885 34466 4556789999987
Q ss_pred CC-----CeeeEEee--------cCceeEEEecCCCEEEEEEcCCeEEEEECCCCe--EEEEecCCCCCeEEEEEcCCCC
Q 002591 739 NN-----GSCTRVFK--------GGTAQMRFQPHLGRYLAAAAENVVSILDAETQA--CRLSLQGHTKPIDSVCWDPSGE 803 (903)
Q Consensus 739 ~t-----~~~~~~~~--------~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~--~~~~l~~h~~~V~sl~~spdg~ 803 (903)
.- .+.+..-. .-...+.|+|....+.+-.....-.+++++... ....+ ...+.|.|.||..||.
T Consensus 90 ~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~ 168 (671)
T PF15390_consen 90 CPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQ 168 (671)
T ss_pred ccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCC
Confidence 52 22221111 122347799998888877776666666766543 33334 3567899999999999
Q ss_pred EEEEEeCC--eEEEEECCC
Q 002591 804 LLASVSED--SVRVWTVGS 820 (903)
Q Consensus 804 ~lasgs~d--~I~iwdl~s 820 (903)
.|+.+-.. .-+|||-..
T Consensus 169 RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 169 RLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred EEEEEeCCeEEEEEecCch
Confidence 66665544 789998654
No 422
>PHA03098 kelch-like protein; Provisional
Probab=95.39 E-value=0.6 Score=55.82 Aligned_cols=154 Identities=9% Similarity=0.033 Sum_probs=75.0
Q ss_pred CeEEEEEeCC-----CcEEEEEcCCCeeeEEe--ecCc-eeEEEecCCCEEEEEEcC------CeEEEEECCCCeEEEEe
Q 002591 721 DDLICSCDGD-----GEIRYWSINNGSCTRVF--KGGT-AQMRFQPHLGRYLAAAAE------NVVSILDAETQACRLSL 786 (903)
Q Consensus 721 ~~ll~sgs~D-----g~I~iwDi~t~~~~~~~--~~~~-~~v~~sp~~~~ll~~s~d------g~I~i~D~~t~~~~~~l 786 (903)
+.+++.|+.+ ..+..||..+.+....- ..+. .......++..++.|+.+ +.+..||..+.+-...-
T Consensus 343 ~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~ 422 (534)
T PHA03098 343 NRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGS 422 (534)
T ss_pred CEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecC
Confidence 4566677765 34778888776543321 1111 111222344555555531 46888998876433211
Q ss_pred cCCCC-CeEEEEEcCCCCEEEEEeCC---------eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECC-
Q 002591 787 QGHTK-PIDSVCWDPSGELLASVSED---------SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCY- 855 (903)
Q Consensus 787 ~~h~~-~V~sl~~spdg~~lasgs~d---------~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~d- 855 (903)
..... .-.+++. .++.+++.|+.+ .+.+||..+..- ..+..+.........+.+ +++.+++|+.+
T Consensus 423 ~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~ 498 (534)
T PHA03098 423 PLPISHYGGCAIY-HDGKIYVIGGISYIDNIKVYNIVESYNPVTNKW-TELSSLNFPRINASLCIF--NNKIYVVGGDKY 498 (534)
T ss_pred CCCccccCceEEE-ECCEEEEECCccCCCCCcccceEEEecCCCCce-eeCCCCCcccccceEEEE--CCEEEEEcCCcC
Confidence 10001 1112222 345666665532 388888876421 111111111111122222 56666666654
Q ss_pred ----CeEEEEECCCCcEEEEccCCCCE
Q 002591 856 ----QSLELWNMSENKTMTLTAHEGLI 878 (903)
Q Consensus 856 ----g~I~vwdl~~~~~~~~~~h~~~V 878 (903)
+.|.+||..+++...+......+
T Consensus 499 ~~~~~~v~~yd~~~~~W~~~~~~p~~~ 525 (534)
T PHA03098 499 EYYINEIEVYDDKTNTWTLFCKFPKVI 525 (534)
T ss_pred CcccceeEEEeCCCCEEEecCCCcccc
Confidence 47899999888766544433333
No 423
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=95.26 E-value=3.7 Score=43.30 Aligned_cols=209 Identities=16% Similarity=0.107 Sum_probs=126.5
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE-
Q 002591 668 ITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV- 746 (903)
Q Consensus 668 V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~- 746 (903)
-..|+-.+||..-+++...+.|--.|-.+ ++....-.+....-..|..-|++...|+ ....-|.-.|.++.+..+-
T Consensus 64 p~dvapapdG~VWft~qg~gaiGhLdP~t-Gev~~ypLg~Ga~Phgiv~gpdg~~Wit--d~~~aI~R~dpkt~evt~f~ 140 (353)
T COG4257 64 PFDVAPAPDGAVWFTAQGTGAIGHLDPAT-GEVETYPLGSGASPHGIVVGPDGSAWIT--DTGLAIGRLDPKTLEVTRFP 140 (353)
T ss_pred ccccccCCCCceEEecCccccceecCCCC-CceEEEecCCCCCCceEEECCCCCeeEe--cCcceeEEecCcccceEEee
Confidence 45667788888888888888888788877 5544444455556667888888876662 2222566667766654331
Q ss_pred e-----ecCceeEEEecCCCEEEEEEc---------CCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-
Q 002591 747 F-----KGGTAQMRFQPHLGRYLAAAA---------ENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED- 811 (903)
Q Consensus 747 ~-----~~~~~~v~~sp~~~~ll~~s~---------dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d- 811 (903)
+ ........|.+++...+++.. .+.|++|+.-. ...-..||..|+|.+.++.-.+
T Consensus 141 lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPq----------G~gpyGi~atpdGsvwyaslagn 210 (353)
T COG4257 141 LPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQ----------GGGPYGICATPDGSVWYASLAGN 210 (353)
T ss_pred cccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccCC----------CCCCcceEECCCCcEEEEecccc
Confidence 1 134566778888887777653 13455554432 2345678999999976665555
Q ss_pred eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE--EEccCCCCEEEEEEecCCCE
Q 002591 812 SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM--TLTAHEGLIAALAVSTETGY 889 (903)
Q Consensus 812 ~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~--~~~~h~~~V~sl~~spdg~~ 889 (903)
.|...|..++.. +.+..-.........+-.+|-++.-++....+.+.-||-...... .+.+....-.++.++..++.
T Consensus 211 aiaridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD~~grV 289 (353)
T COG4257 211 AIARIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRV 289 (353)
T ss_pred ceEEcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeeccCCcE
Confidence 777777666521 222222221333455566777877777777778888887665543 33344444444444444443
Q ss_pred E
Q 002591 890 V 890 (903)
Q Consensus 890 L 890 (903)
.
T Consensus 290 W 290 (353)
T COG4257 290 W 290 (353)
T ss_pred E
Confidence 3
No 424
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=95.21 E-value=6.2 Score=43.39 Aligned_cols=229 Identities=11% Similarity=0.003 Sum_probs=108.3
Q ss_pred CCCEEEEEeCCCcEEEEECCC--CceeEEeccCCCCeEEEEECCCCCEEEEEeC-CCcEEEEeCCCCC------------
Q 002591 634 DGKLLATGGHDKKAVLWHTDT--LKSKTNLEEHSSLITDVRFSPSMPRLATSSF-DKTVRVWDADNPG------------ 698 (903)
Q Consensus 634 dg~~Latgs~Dg~V~vWd~~t--~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~-Dg~I~IWDl~~~~------------ 698 (903)
++++|+.|+.+|.. +.++.. .+..+. .+...|+++...+.-..|++-+. ...++++++..-.
T Consensus 12 ~~~~lL~GTe~Gly-~~~~~~~~~~~~kl--~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~ 88 (302)
T smart00036 12 DGKWLLVGTEEGLY-VLNISDQPGTLEKL--IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLV 88 (302)
T ss_pred CCcEEEEEeCCceE-EEEcccCCCCeEEe--cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcccc
Confidence 34689999999854 444553 223333 34568999999888777666653 3449999984211
Q ss_pred --ceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC--e--eeEEe---e----cCceeEEEecC--CCEE
Q 002591 699 --YSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG--S--CTRVF---K----GGTAQMRFQPH--LGRY 763 (903)
Q Consensus 699 --~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~--~--~~~~~---~----~~~~~v~~sp~--~~~l 763 (903)
+.......|.....-+++......+++++.....|.++..... + ..+.+ . .....+..++. ...+
T Consensus 89 ~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (302)
T smart00036 89 IRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPGI 168 (302)
T ss_pred ccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceEE
Confidence 0011122344433333333222223334444566666544322 1 12211 0 11111222222 3466
Q ss_pred EEEEcCCeEEEEECCC--CeE-----EEEecCCC-CCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCC
Q 002591 764 LAAAAENVVSILDAET--QAC-----RLSLQGHT-KPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGN 835 (903)
Q Consensus 764 l~~s~dg~I~i~D~~t--~~~-----~~~l~~h~-~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~ 835 (903)
++|+..+...++++.. ... -....... .++..+. -+++.++++ -++...+.|...... .....+.- ..
T Consensus 169 cvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~-l~~~e~Llc-~~~~~v~Vn~~G~~~-~r~~~l~w-~~ 244 (302)
T smart00036 169 CIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQ-VPRDEFLLC-YDEFGVFVNLYGKRR-SRNPILHW-EF 244 (302)
T ss_pred EEEEcCCCCeEEEEeecccccccccccccccccccCceEEEE-ECCCeEEEE-ECcEEEEEeCCCCcc-ccceEEEc-CC
Confidence 6666643344444422 110 00011111 3333333 344555544 344444445432111 11111221 33
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEc
Q 002591 836 KFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLT 872 (903)
Q Consensus 836 ~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~ 872 (903)
...++++. ..+|++-+ ++.|.|+++.+++.+...
T Consensus 245 ~p~~~~~~--~pyll~~~-~~~ievr~l~~~~l~q~i 278 (302)
T smart00036 245 MPESFAYH--SPYLLAFH-DNGIEIRSIKTGELLQEL 278 (302)
T ss_pred cccEEEEE--CCEEEEEc-CCcEEEEECCCCceEEEE
Confidence 45566776 35666665 556999999999877433
No 425
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.18 E-value=0.19 Score=61.25 Aligned_cols=72 Identities=25% Similarity=0.382 Sum_probs=57.1
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEE---ECCCCCEEEEEeCCCcEEEEeC
Q 002591 621 ASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR---FSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 621 ~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~---fspdg~~Lasgs~Dg~I~IWDl 694 (903)
.-.++|+|++|+.+|++++.|-.+|.|.+||+..++.++.+..|..+++.+- +..++..++++...|. +|.+
T Consensus 128 ~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 128 RVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred ccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEE
Confidence 4567999999999999999999999999999999999999887776655544 3445556777766665 5544
No 426
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=95.06 E-value=0.0079 Score=71.11 Aligned_cols=121 Identities=16% Similarity=0.163 Sum_probs=76.4
Q ss_pred eEeecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC--CCceeEEe-----ccCCCCeEEEEECC---CCCEEEEEeC
Q 002591 617 NSVRASTSKVICCHFSS-DGKLLATGGHDKKAVLWHTD--TLKSKTNL-----EEHSSLITDVRFSP---SMPRLATSSF 685 (903)
Q Consensus 617 ~~l~~H~~~V~~l~fsp-dg~~Latgs~Dg~V~vWd~~--t~~~~~~l-----~~h~~~V~~l~fsp---dg~~Lasgs~ 685 (903)
..+++-.+.|-.+.|.. +...++ -.-|.+.|||++ .|+....+ ......+.-|.|.| +..++.++-.
T Consensus 126 ~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~ 203 (1283)
T KOG1916|consen 126 ELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLK 203 (1283)
T ss_pred HHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccC
Confidence 34567788888888854 222333 233678999976 44433322 22334445556654 5667777788
Q ss_pred CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC
Q 002591 686 DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG 741 (903)
Q Consensus 686 Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~ 741 (903)
+++|++..+++. ....+.+|...++.++|...|-..+..-+-||+|..|-+..|
T Consensus 204 ~~~i~lL~~~ra--~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG 257 (1283)
T KOG1916|consen 204 GGEIRLLNINRA--LRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDG 257 (1283)
T ss_pred CCceeEeeechH--HHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCC
Confidence 999998887652 235566799999998887776555555556666666655443
No 427
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.05 E-value=4.3 Score=49.86 Aligned_cols=30 Identities=17% Similarity=0.111 Sum_probs=23.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 002591 665 SSLITDVRFSPSMPRLATSSFDKTVRVWDAD 695 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~ 695 (903)
.-.|..|.++++|++|+..|..| |.|-.+.
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP 113 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLELP 113 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEec
Confidence 34688999999999999988766 5555553
No 428
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.02 E-value=0.39 Score=48.35 Aligned_cols=176 Identities=15% Similarity=0.122 Sum_probs=98.6
Q ss_pred CCCEEEEEeC--CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCcee
Q 002591 676 SMPRLATSSF--DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQ 753 (903)
Q Consensus 676 dg~~Lasgs~--Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~ 753 (903)
++.++.+.+. ...|++||+++ +..+....-....+..=-...-++++..-.-.||.-.++|.++.+++..+.-.-..
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~-gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTT-GQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccC-ceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcc
Confidence 3455655554 45699999997 44444333222222222222224555556667899999999999988877655555
Q ss_pred EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEe----cC-CCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcce-
Q 002591 754 MRFQPHLGRYLAAAAENVVSILDAETQACRLSL----QG-HTKPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGEC- 826 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l----~~-h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~- 826 (903)
-....++..++.+.....+..-|.++.....++ .+ .-..++.+.|- +|.+.|-.-.. .|...|..+++....
T Consensus 134 WgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sGrV~~wi 212 (262)
T COG3823 134 WGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSGRVVAWI 212 (262)
T ss_pred eeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCCcEEEEE
Confidence 555566677777777778888887765433322 22 11223334443 35544444333 455555555422111
Q ss_pred --------EEEeecCCCceEEEEEeCCCCEEEEEE
Q 002591 827 --------VHELSCNGNKFHSCVFHPTYPSLLVIG 853 (903)
Q Consensus 827 --------i~~~~~~~~~i~si~~sp~g~~l~t~s 853 (903)
+.....+.+..+.+++.|....|+..+
T Consensus 213 dlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 213 DLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred EccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 111223345677889998885555544
No 429
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=94.92 E-value=0.2 Score=61.41 Aligned_cols=142 Identities=11% Similarity=0.026 Sum_probs=92.7
Q ss_pred CeEEEEECCCCCEEEEE--eCCCcEEEEeCCCCCce----eE------EeccCCCceEEEEecCCCCeEEEEEeCCCcEE
Q 002591 667 LITDVRFSPSMPRLATS--SFDKTVRVWDADNPGYS----LR------TFMGHSASVMSLDFHPNKDDLICSCDGDGEIR 734 (903)
Q Consensus 667 ~V~~l~fspdg~~Lasg--s~Dg~I~IWDl~~~~~~----~~------~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~ 734 (903)
.|..+...+|+...++. +.+-.|..||+++-... .+ +.......+.++.|.|.-....+.+..|+.|+
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~ 181 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLR 181 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchh
Confidence 45566666776654443 34557889999752111 11 11122345667889987666667888899999
Q ss_pred EEEcCCCe-eeE--EeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecC----CCCCeEEEEEcCCCCEEEE
Q 002591 735 YWSINNGS-CTR--VFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQG----HTKPIDSVCWDPSGELLAS 807 (903)
Q Consensus 735 iwDi~t~~-~~~--~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~----h~~~V~sl~~spdg~~las 807 (903)
+..+.... .+. .+.....+++|+|.|..++++-..|++.-|...-. ....+.+ ....|.+|+|.....++++
T Consensus 182 V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~le-ik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 182 VKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLE-IKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred hhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecccc-eeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 98776433 122 23346788999999999999999999988865432 2222221 1367999999987777765
Q ss_pred Ee
Q 002591 808 VS 809 (903)
Q Consensus 808 gs 809 (903)
.+
T Consensus 261 y~ 262 (1405)
T KOG3630|consen 261 YG 262 (1405)
T ss_pred ec
Confidence 43
No 430
>PHA03098 kelch-like protein; Provisional
Probab=94.91 E-value=0.72 Score=55.13 Aligned_cols=181 Identities=10% Similarity=0.056 Sum_probs=86.6
Q ss_pred CCCCEEEEEeCCC------cEEEEECCCCceeE--EeccCCCCeEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCCc
Q 002591 633 SDGKLLATGGHDK------KAVLWHTDTLKSKT--NLEEHSSLITDVRFSPSMPRLATSSFD-----KTVRVWDADNPGY 699 (903)
Q Consensus 633 pdg~~Latgs~Dg------~V~vWd~~t~~~~~--~l~~h~~~V~~l~fspdg~~Lasgs~D-----g~I~IWDl~~~~~ 699 (903)
.++.+++.|+.++ .+..||..+.+-.. .+.........+.+ ++..++.|+.+ ..+.+||..+...
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 370 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKW 370 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence 3455667776542 57788876543321 11111222222322 56677778765 3477888876332
Q ss_pred eeEEecc--CCCceEEEEecCCCCeEEEEEeCC------CcEEEEEcCCCeeeEEeec--Cc-eeEEEecCCCEEEEEEc
Q 002591 700 SLRTFMG--HSASVMSLDFHPNKDDLICSCDGD------GEIRYWSINNGSCTRVFKG--GT-AQMRFQPHLGRYLAAAA 768 (903)
Q Consensus 700 ~~~~~~~--h~~~V~sl~fsp~~~~ll~sgs~D------g~I~iwDi~t~~~~~~~~~--~~-~~v~~sp~~~~ll~~s~ 768 (903)
. .... +...-.+++.. ++.+++.|+.+ ..+..||+.+.+....-.. .. .......++..++.|+.
T Consensus 371 ~--~~~~lp~~r~~~~~~~~--~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 446 (534)
T PHA03098 371 R--EEPPLIFPRYNPCVVNV--NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGI 446 (534)
T ss_pred e--eCCCcCcCCccceEEEE--CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCc
Confidence 1 1111 11111122222 34566666632 4588899887764432211 11 11222334445555543
Q ss_pred C--------CeEEEEECCCCeEEEE--ecCCCCCeEEEEEcCCCCEEEEEeCC------eEEEEECCCC
Q 002591 769 E--------NVVSILDAETQACRLS--LQGHTKPIDSVCWDPSGELLASVSED------SVRVWTVGSG 821 (903)
Q Consensus 769 d--------g~I~i~D~~t~~~~~~--l~~h~~~V~sl~~spdg~~lasgs~d------~I~iwdl~s~ 821 (903)
+ ..+.+||..+.+-... +.........+.+ ++++++.|+.+ .|.+||..+.
T Consensus 447 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 447 SYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred cCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 2 2388899887654322 1111111112222 56666666542 5777777653
No 431
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=94.89 E-value=0.97 Score=51.24 Aligned_cols=105 Identities=10% Similarity=0.033 Sum_probs=61.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCeEEEE-ECCCCC----Ccc-eEEEeecC----CCceEEEEEeCCCCEEEEEECC----
Q 002591 790 TKPIDSVCWDPSGELLASVSEDSVRVW-TVGSGS----EGE-CVHELSCN----GNKFHSCVFHPTYPSLLVIGCY---- 855 (903)
Q Consensus 790 ~~~V~sl~~spdg~~lasgs~d~I~iw-dl~s~~----~~~-~i~~~~~~----~~~i~si~~sp~g~~l~t~s~d---- 855 (903)
-...+.++|.++| +++ ++...|..| |..... ..+ .+..+... ......++|.|+|...++.+..
T Consensus 71 l~~p~Gi~~~~~G-lyV-~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~ 148 (367)
T TIGR02604 71 LSMVTGLAVAVGG-VYV-ATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASK 148 (367)
T ss_pred CCCccceeEecCC-EEE-eCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCce
Confidence 3445788999888 544 444455544 443211 112 22223221 3447788999999866655521
Q ss_pred ---------------CeEEEEECCCCcEEEEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 856 ---------------QSLELWNMSENKTMTLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 856 ---------------g~I~vwdl~~~~~~~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
+.|.-+|..+++...+.........++|+++|+++++-..+
T Consensus 149 ~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 149 VTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred eccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEccCC
Confidence 35666666666554444344556789999999988765433
No 432
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.87 E-value=1.6 Score=53.40 Aligned_cols=26 Identities=31% Similarity=0.279 Sum_probs=20.9
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEE
Q 002591 624 SKVICCHFSSDGKLLATGGHDKKAVL 649 (903)
Q Consensus 624 ~~V~~l~fspdg~~Latgs~Dg~V~v 649 (903)
-.|..|.++++|++||..|..|.+.+
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~ 110 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVL 110 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEE
Confidence 46889999999999999987664443
No 433
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=94.80 E-value=9.3 Score=43.37 Aligned_cols=218 Identities=10% Similarity=0.032 Sum_probs=101.7
Q ss_pred CCCEEEEEe-CCCcEEEEeCCCCC---ceeEEecc---CC----CceEEEEecCCCCeEEEEE--eC----CCcEEEEEc
Q 002591 676 SMPRLATSS-FDKTVRVWDADNPG---YSLRTFMG---HS----ASVMSLDFHPNKDDLICSC--DG----DGEIRYWSI 738 (903)
Q Consensus 676 dg~~Lasgs-~Dg~I~IWDl~~~~---~~~~~~~~---h~----~~V~sl~fsp~~~~ll~sg--s~----Dg~I~iwDi 738 (903)
+.++|+..+ ..+.|+|+|+.+.- +..+++.. +. ..-..+...|+|+.+| ++ +. -|.+.++|-
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imI-S~lGd~~G~g~Ggf~llD~ 164 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMI-SALGDADGNGPGGFVLLDG 164 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEE-EEEEETTS-S--EEEEE-T
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEE-EeccCCCCCCCCcEEEEcC
Confidence 455777777 57899999998532 22333331 10 1122233446665444 43 22 356888898
Q ss_pred CCCeeeEEeecC------ceeEEEecCCCEEEEEEc--------------------CCeEEEEECCCCeEEEEecCCCC-
Q 002591 739 NNGSCTRVFKGG------TAQMRFQPHLGRYLAAAA--------------------ENVVSILDAETQACRLSLQGHTK- 791 (903)
Q Consensus 739 ~t~~~~~~~~~~------~~~v~~sp~~~~ll~~s~--------------------dg~I~i~D~~t~~~~~~l~~h~~- 791 (903)
++.+.+..++.. ...+-|.|..+.++++.. ...+.+||+.+.+.+.++.--..
T Consensus 165 ~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g 244 (461)
T PF05694_consen 165 ETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEG 244 (461)
T ss_dssp TT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTE
T ss_pred ccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCC
Confidence 888877776542 234667888787777542 35899999999999998875432
Q ss_pred -CeEEEEEcCC--CCEEEEEe-CC-eEEEEECCCCCCcc--eEEEeecC-----------------CCceEEEEEeCCCC
Q 002591 792 -PIDSVCWDPS--GELLASVS-ED-SVRVWTVGSGSEGE--CVHELSCN-----------------GNKFHSCVFHPTYP 847 (903)
Q Consensus 792 -~V~sl~~spd--g~~lasgs-~d-~I~iwdl~s~~~~~--~i~~~~~~-----------------~~~i~si~~sp~g~ 847 (903)
....|.|..+ ..+=++++ -. +|..|--....... .+..+... ..-|+.|..+.|.+
T Consensus 245 ~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDr 324 (461)
T PF05694_consen 245 QMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDR 324 (461)
T ss_dssp EEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-
T ss_pred CceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCC
Confidence 3456666554 44333333 33 55544432221111 11111110 23478999999999
Q ss_pred EEEEEEC-CCeEEEEECCCCcE---E-E-Ecc---------------CCCCEEEEEEecCCCEEEEEe
Q 002591 848 SLLVIGC-YQSLELWNMSENKT---M-T-LTA---------------HEGLIAALAVSTETGYVASAS 894 (903)
Q Consensus 848 ~l~t~s~-dg~I~vwdl~~~~~---~-~-~~~---------------h~~~V~sl~~spdg~~LaSgs 894 (903)
+|++.+. .|.|+.||+..-.. + . ..+ -.+...-|..|-||+.|+..+
T Consensus 325 fLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 325 FLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred EEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 9998876 68999999986432 2 1 111 112335677888888776554
No 434
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=94.75 E-value=1.1 Score=50.75 Aligned_cols=141 Identities=11% Similarity=0.098 Sum_probs=94.4
Q ss_pred CCCEEE-EEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCC-------eEEEEEeCCCcEEEEEcCCCe-eeE-
Q 002591 676 SMPRLA-TSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKD-------DLICSCDGDGEIRYWSINNGS-CTR- 745 (903)
Q Consensus 676 dg~~La-sgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~-------~ll~sgs~Dg~I~iwDi~t~~-~~~- 745 (903)
+..+|+ .|+....++-.|++. ++.+..+.-|... -+.|.|... .-| .|-.+..|.-.|.+-.. .+.
T Consensus 478 dssli~~dg~~~~kLykmDIEr-GkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtl-vGlS~~svFrIDPR~~gNKi~v 553 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIER-GKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTL-VGLSDYSVFRIDPRARGNKIKV 553 (776)
T ss_pred CcceEEecCCCcccceeeeccc-ceeeeEeecCCcc--eeecCCchhHHhcCccceE-EeecccceEEecccccCCceee
Confidence 344443 444556677778876 7888888877765 366776532 123 45557777777776432 222
Q ss_pred -EeecCceeEEE----ecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCC
Q 002591 746 -VFKGGTAQMRF----QPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGS 820 (903)
Q Consensus 746 -~~~~~~~~v~~----sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s 820 (903)
.++.-...-.| ....+++++++..|.|++||--.-.....+.+-...|..|..+.+|++|++.|...+.+-|++-
T Consensus 554 ~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~yllL~d~~i 633 (776)
T COG5167 554 VESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKNYLLLTDVPI 633 (776)
T ss_pred eeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecceEEEEeccc
Confidence 22222222222 3345899999999999999976555555666777889999999999999998888888888753
No 435
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.72 E-value=4.9 Score=42.92 Aligned_cols=145 Identities=13% Similarity=0.084 Sum_probs=87.4
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEe-CCCCCceeE
Q 002591 625 KVICCHFSSDGKLLATGG-HDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWD-ADNPGYSLR 702 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs-~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWD-l~~~~~~~~ 702 (903)
.+.+.++++++..+|... .++.-.||-...+.....+. ....++.-.|++++...+....+...+++. ..+......
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~ 103 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPV 103 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeE
Confidence 789999999999777655 23333333333333333322 223788899999988777777677777774 222222222
Q ss_pred Eecc--CCCceEEEEecCCCCeEEEEEe--CCCcEEEEEcCC---C--e----eeEEe---ecCceeEEEecCCCEEEEE
Q 002591 703 TFMG--HSASVMSLDFHPNKDDLICSCD--GDGEIRYWSINN---G--S----CTRVF---KGGTAQMRFQPHLGRYLAA 766 (903)
Q Consensus 703 ~~~~--h~~~V~sl~fsp~~~~ll~sgs--~Dg~I~iwDi~t---~--~----~~~~~---~~~~~~v~~sp~~~~ll~~ 766 (903)
.+.. ....|..+.++|||.++++... .++.|.+--+.. + . .+... ...+..+.|..++..++.+
T Consensus 104 ~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~ 183 (253)
T PF10647_consen 104 EVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLG 183 (253)
T ss_pred EecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEe
Confidence 2221 1128999999999999876663 356777665532 2 0 11111 1345678899988777666
Q ss_pred EcCC
Q 002591 767 AAEN 770 (903)
Q Consensus 767 s~dg 770 (903)
...+
T Consensus 184 ~~~~ 187 (253)
T PF10647_consen 184 RSAG 187 (253)
T ss_pred CCCC
Confidence 5543
No 436
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=94.71 E-value=0.66 Score=55.27 Aligned_cols=125 Identities=13% Similarity=0.167 Sum_probs=84.4
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEE--CCCCCEEEEEeCCCc
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRF--SPSMPRLATSSFDKT 688 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~f--spdg~~Lasgs~Dg~ 688 (903)
.|....+++..-..+.-+.-+.-++..++-+....+.|||...+.....-. ...+.|.+++| .|++..+++.+....
T Consensus 18 ~w~~t~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~ 97 (631)
T PF12234_consen 18 EWLLTSTFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHH 97 (631)
T ss_pred EEEEEEEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcE
Confidence 556666777666677777777766655555555679999998776544433 45788999999 468889999999999
Q ss_pred EEEEeCC-----CCC---ceeEE--eccCC-CceEEEEecCCCCeEEEEEeCCCcEEEEEcC
Q 002591 689 VRVWDAD-----NPG---YSLRT--FMGHS-ASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 739 (903)
Q Consensus 689 I~IWDl~-----~~~---~~~~~--~~~h~-~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~ 739 (903)
|.+|.-. +.+ ..++. +..|+ .+|.+..|.++|. ++ +|+ ++.+.|+|-.
T Consensus 98 v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~-Lv-V~s-GNqlfv~dk~ 156 (631)
T PF12234_consen 98 VLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGT-LV-VGS-GNQLFVFDKW 156 (631)
T ss_pred EEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCe-EE-EEe-CCEEEEECCC
Confidence 9998442 111 12222 22344 5789999999874 33 333 4678888743
No 437
>PRK13684 Ycf48-like protein; Provisional
Probab=94.70 E-value=7.7 Score=43.32 Aligned_cols=147 Identities=11% Similarity=0.081 Sum_probs=83.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE-eccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCee
Q 002591 665 SSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT-FMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSC 743 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~-~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~ 743 (903)
...+.++.+.+++.+++++. .|.+.. ..+..+..... ...-...++++.+.+++. ++++ +..|.+++=....+..
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~-s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~-~~~v-g~~G~~~~~s~d~G~s 247 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYS-TWEPGQTAWTPHQRNSSRRLQSMGFQPDGN-LWML-ARGGQIRFNDPDDLES 247 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEE-EcCCCCCeEEEeeCCCcccceeeeEcCCCC-EEEE-ecCCEEEEccCCCCCc
Confidence 45789999999987666554 554432 22222222222 223456788999998866 4434 4467665433444432
Q ss_pred eEEee-------cCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEe---cCCCCCeEEEEEcCCCCEEEEEeCCeE
Q 002591 744 TRVFK-------GGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSL---QGHTKPIDSVCWDPSGELLASVSEDSV 813 (903)
Q Consensus 744 ~~~~~-------~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l---~~h~~~V~sl~~spdg~~lasgs~d~I 813 (903)
-.... .....+.+.+++. +++++.+|.|.. ....++.-... ..-...+..+.|..+++.+++|..+.|
T Consensus 248 W~~~~~~~~~~~~~l~~v~~~~~~~-~~~~G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~i 325 (334)
T PRK13684 248 WSKPIIPEITNGYGYLDLAYRTPGE-IWAGGGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVLGQRGVL 325 (334)
T ss_pred cccccCCccccccceeeEEEcCCCC-EEEEcCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEECCCceE
Confidence 22111 1244566777544 566666775553 33333322222 222345778888888888888887777
Q ss_pred EEEE
Q 002591 814 RVWT 817 (903)
Q Consensus 814 ~iwd 817 (903)
..|+
T Consensus 326 l~~~ 329 (334)
T PRK13684 326 LRYV 329 (334)
T ss_pred EEec
Confidence 6665
No 438
>PLN02193 nitrile-specifier protein
Probab=94.69 E-value=12 Score=44.03 Aligned_cols=171 Identities=8% Similarity=-0.002 Sum_probs=81.7
Q ss_pred CeEEEEEeCC-------CcEEEEEcCCCeeeEEee-c--C---ceeE-EEecCCCEEEEEEcC-----CeEEEEECCCCe
Q 002591 721 DDLICSCDGD-------GEIRYWSINNGSCTRVFK-G--G---TAQM-RFQPHLGRYLAAAAE-----NVVSILDAETQA 781 (903)
Q Consensus 721 ~~ll~sgs~D-------g~I~iwDi~t~~~~~~~~-~--~---~~~v-~~sp~~~~ll~~s~d-----g~I~i~D~~t~~ 781 (903)
+.+++.|+.+ ..+.+||+++.+....-. + + .... .....+..++.++.+ +.+.+||+.+.+
T Consensus 176 ~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~~ 255 (470)
T PLN02193 176 NKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTNE 255 (470)
T ss_pred CEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCCE
Confidence 4566666643 247788888765432111 0 0 0111 122333445555543 468889998765
Q ss_pred EEEEecC----CCCCeEEEEEcCCCCEEEEEeCC------eEEEEECCCCCCcceEEE---eecCCCceEEEEEeCCCCE
Q 002591 782 CRLSLQG----HTKPIDSVCWDPSGELLASVSED------SVRVWTVGSGSEGECVHE---LSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 782 ~~~~l~~----h~~~V~sl~~spdg~~lasgs~d------~I~iwdl~s~~~~~~i~~---~~~~~~~i~si~~sp~g~~ 848 (903)
-...-.. ....-.+++. -++++++.|+.+ .+.+||+.+..- ..+.. ....... ..++. -+++.
T Consensus 256 W~~l~~~~~~P~~R~~h~~~~-~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~~~~R~~-~~~~~-~~gki 331 (470)
T PLN02193 256 WKLLTPVEEGPTPRSFHSMAA-DEENVYVFGGVSATARLKTLDSYNIVDKKW-FHCSTPGDSFSIRGG-AGLEV-VQGKV 331 (470)
T ss_pred EEEcCcCCCCCCCccceEEEE-ECCEEEEECCCCCCCCcceEEEEECCCCEE-EeCCCCCCCCCCCCC-cEEEE-ECCcE
Confidence 4332111 1111122222 245555555532 467788765421 11110 0000111 12222 25666
Q ss_pred EEEEECC----CeEEEEECCCCcEEEEccC-----CCCEEEEEEecCCCEEEEEecC
Q 002591 849 LLVIGCY----QSLELWNMSENKTMTLTAH-----EGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 849 l~t~s~d----g~I~vwdl~~~~~~~~~~h-----~~~V~sl~~spdg~~LaSgs~D 896 (903)
+++++.+ ..|.+||+.+.+...+... .....++ ..-++++++.|+.+
T Consensus 332 yviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~-~~~~~~iyv~GG~~ 387 (470)
T PLN02193 332 WVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFAS-AAVGKHIVIFGGEI 387 (470)
T ss_pred EEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEE-EEECCEEEEECCcc
Confidence 6777655 4689999998876644322 1111222 23356777777753
No 439
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=94.54 E-value=2.9 Score=42.82 Aligned_cols=49 Identities=10% Similarity=0.038 Sum_probs=36.5
Q ss_pred CEEEEEeCCCcEEEEECC--CCceeEEeccCCCCeEEEEECCCCCEEEEEeC
Q 002591 636 KLLATGGHDKKAVLWHTD--TLKSKTNLEEHSSLITDVRFSPSMPRLATSSF 685 (903)
Q Consensus 636 ~~Latgs~Dg~V~vWd~~--t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~ 685 (903)
+.|+.+...++|.+|++. ......+|..- +.|..+.++..|+||+|-=.
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~ 79 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEE 79 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEe
Confidence 355444566789999987 44555666544 78999999999999999743
No 440
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=94.45 E-value=3.2 Score=45.22 Aligned_cols=186 Identities=12% Similarity=0.128 Sum_probs=101.6
Q ss_pred cEEEEeCCCCCceeEEecc------CCCceEEEEecCCC-----CeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEE
Q 002591 688 TVRVWDADNPGYSLRTFMG------HSASVMSLDFHPNK-----DDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRF 756 (903)
Q Consensus 688 ~I~IWDl~~~~~~~~~~~~------h~~~V~sl~fsp~~-----~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~ 756 (903)
+|.+||+.+ .+.++++.- ..+.+..+.+.... .+.+++=...+.|.|+|+.+++..+...... ..
T Consensus 35 KLv~~Dl~t-~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~---~~ 110 (287)
T PF03022_consen 35 KLVAFDLKT-NQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSF---SP 110 (287)
T ss_dssp EEEEEETTT-TCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGC---TT
T ss_pred EEEEEECCC-CcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCc---ce
Confidence 477788887 445555442 24567777776532 2334454555789999999999877765411 11
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcC---CCCEEEEEeCCeEEEEECCCC-----CC-----
Q 002591 757 QPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDP---SGELLASVSEDSVRVWTVGSG-----SE----- 823 (903)
Q Consensus 757 sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~sp---dg~~lasgs~d~I~iwdl~s~-----~~----- 823 (903)
.|....+.. +|... ... ..+..++.+| ++++|+-......++|.+.+. ..
T Consensus 111 ~p~~~~~~i---~g~~~-----------~~~---dg~~gial~~~~~d~r~LYf~~lss~~ly~v~T~~L~~~~~~~~~~ 173 (287)
T PF03022_consen 111 DPDAGPFTI---GGESF-----------QWP---DGIFGIALSPISPDGRWLYFHPLSSRKLYRVPTSVLRDPSLSDAQA 173 (287)
T ss_dssp S-SSEEEEE---TTEEE-----------EET---TSEEEEEE-TTSTTS-EEEEEETT-SEEEEEEHHHHCSTT--HHH-
T ss_pred eccccceec---cCceE-----------ecC---CCccccccCCCCCCccEEEEEeCCCCcEEEEEHHHhhCcccccccc
Confidence 111111111 11111 111 2277777766 777777776554455554332 11
Q ss_pred -cceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCC----cE-E-EEccC-CCCEEEEEEec--CCCEEEEE
Q 002591 824 -GECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSEN----KT-M-TLTAH-EGLIAALAVST--ETGYVASA 893 (903)
Q Consensus 824 -~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~----~~-~-~~~~h-~~~V~sl~~sp--dg~~LaSg 893 (903)
...+..+.........++++++|..+++--..+.|..|+..+. .. + ..... -..+.++.+.+ +|.+.+.+
T Consensus 174 ~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 174 LASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLS 253 (287)
T ss_dssp HHHT-EEEEE---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE
T ss_pred ccccceeccccCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEE
Confidence 1122333222345667889999988888888899999999871 22 2 22222 35788999998 77765554
Q ss_pred e
Q 002591 894 S 894 (903)
Q Consensus 894 s 894 (903)
.
T Consensus 254 n 254 (287)
T PF03022_consen 254 N 254 (287)
T ss_dssp -
T ss_pred C
Confidence 3
No 441
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=94.34 E-value=0.12 Score=39.47 Aligned_cols=33 Identities=21% Similarity=0.457 Sum_probs=29.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLK 656 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~ 656 (903)
...|.+++|+|..++||.|..+|.|.||.+ +++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~q 43 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQ 43 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCc
Confidence 456999999999999999999999999998 444
No 442
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=94.24 E-value=12 Score=42.32 Aligned_cols=186 Identities=11% Similarity=0.027 Sum_probs=96.8
Q ss_pred EEEEEeCCCcEEEEeCCCCCceeEEeccC--CCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCce-eE-
Q 002591 679 RLATSSFDKTVRVWDADNPGYSLRTFMGH--SASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTA-QM- 754 (903)
Q Consensus 679 ~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h--~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~-~v- 754 (903)
.++++..||.|.-.|.++ +..+.....- ...+.+-.+..+|+ |+.++.+|.++.+|.++++.+..++.... .+
T Consensus 70 ~v~~~~~~G~i~A~d~~~-g~~~W~~~~~~~~~~~~~~~~~~~G~--i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~ 146 (370)
T COG1520 70 TVYVGTRDGNIFALNPDT-GLVKWSYPLLGAVAQLSGPILGSDGK--IYVGSWDGKLYALDASTGTLVWSRNVGGSPYYA 146 (370)
T ss_pred eEEEecCCCcEEEEeCCC-CcEEecccCcCcceeccCceEEeCCe--EEEecccceEEEEECCCCcEEEEEecCCCeEEe
Confidence 555557788888888887 3333222111 12222222333444 44788899999999988988877765551 11
Q ss_pred -EEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCC---CeEEEEEcCCCCEEEEEeC--C-eEEEEECCCCCCcceE
Q 002591 755 -RFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTK---PIDSVCWDPSGELLASVSE--D-SVRVWTVGSGSEGECV 827 (903)
Q Consensus 755 -~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~---~V~sl~~spdg~~lasgs~--d-~I~iwdl~s~~~~~~i 827 (903)
.....+..++..+.++.+...|..+++.+........ .+..--...++ .++.+.. + .+.-+|..++......
T Consensus 147 ~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~vy~~~~~~~~~~~a~~~~~G~~~w~~ 225 (370)
T COG1520 147 SPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASG-TVYVGSDGYDGILYALNAEDGTLKWSQ 225 (370)
T ss_pred cCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecc-eEEEecCCCcceEEEEEccCCcEeeee
Confidence 1122234555555789999999999988776543221 11111111122 3333333 3 4556666555322111
Q ss_pred EEeec-CCCce--E-EE---EEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 828 HELSC-NGNKF--H-SC---VFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 828 ~~~~~-~~~~i--~-si---~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
+.... ....+ . .+ ...-+ ..++.++.++.+..+|..+++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~v~v~-~~~~~~~~~g~~~~l~~~~G~~~ 273 (370)
T COG1520 226 KVSQTIGRTAISTTPAVDGGPVYVD-GGVYAGSYGGKLLCLDADTGELI 273 (370)
T ss_pred eeecccCcccccccccccCceEEEC-CcEEEEecCCeEEEEEcCCCceE
Confidence 10000 00000 0 00 01111 22466777788888899988887
No 443
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=94.12 E-value=10 Score=40.96 Aligned_cols=196 Identities=15% Similarity=0.140 Sum_probs=111.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECC-------CCceeEEecc-----CCCCeEEEEECCCCC------------EE
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTD-------TLKSKTNLEE-----HSSLITDVRFSPSMP------------RL 680 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~-------t~~~~~~l~~-----h~~~V~~l~fspdg~------------~L 680 (903)
.-+.|+|+|.+.+-++....++..+||.. ....+.++.. .....+.+.|+.... .+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 35789999999888887788899999986 1123444442 234678888875332 36
Q ss_pred EEEeCCCcEEEEeCCCCCc----eeEEec-cCCCceE-EEEecCC--CCeEEEEEeCCCcEEEEEcCCCeee--EEeecC
Q 002591 681 ATSSFDKTVRVWDADNPGY----SLRTFM-GHSASVM-SLDFHPN--KDDLICSCDGDGEIRYWSINNGSCT--RVFKGG 750 (903)
Q Consensus 681 asgs~Dg~I~IWDl~~~~~----~~~~~~-~h~~~V~-sl~fsp~--~~~ll~sgs~Dg~I~iwDi~t~~~~--~~~~~~ 750 (903)
+.+++||+|.-|.-.-... ....+. .....|+ .+++... +..|.++--..++|.+||-.-.+.. ..|..+
T Consensus 104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP 183 (336)
T TIGR03118 104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDP 183 (336)
T ss_pred EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCC
Confidence 8889999999998532111 122222 1123333 4555433 4556656566899999985533221 112111
Q ss_pred cee----------------EEE---ecCCCEEEEEEcCCeEEEEECCCCeEEEEec--CCCCCeEEEEEcC------CCC
Q 002591 751 TAQ----------------MRF---QPHLGRYLAAAAENVVSILDAETQACRLSLQ--GHTKPIDSVCWDP------SGE 803 (903)
Q Consensus 751 ~~~----------------v~~---sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~--~h~~~V~sl~~sp------dg~ 803 (903)
... +.| .+....-+.+..-|.|.+||.. +..++++. +.-..-+.|+..| .+.
T Consensus 184 ~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~ 262 (336)
T TIGR03118 184 ALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGA 262 (336)
T ss_pred CCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCC
Confidence 111 111 1111222223334689999876 45555553 1222334566544 466
Q ss_pred EEEEEeCC-eEEEEECCCC
Q 002591 804 LLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 804 ~lasgs~d-~I~iwdl~s~ 821 (903)
+|+.--.| +|..||..++
T Consensus 263 lLVGNFGDG~InaFD~~sG 281 (336)
T TIGR03118 263 LLVGNFGDGTINAYDPQSG 281 (336)
T ss_pred eEEeecCCceeEEecCCCC
Confidence 77765556 9999999877
No 444
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=93.84 E-value=4.6 Score=44.73 Aligned_cols=100 Identities=10% Similarity=0.082 Sum_probs=49.2
Q ss_pred CeEEEEEeCC-----CcEEEEEcCCCeee---EEee---cCce-eEEEecCCCEEEEEEc-----CCeEEEEECCCCeEE
Q 002591 721 DDLICSCDGD-----GEIRYWSINNGSCT---RVFK---GGTA-QMRFQPHLGRYLAAAA-----ENVVSILDAETQACR 783 (903)
Q Consensus 721 ~~ll~sgs~D-----g~I~iwDi~t~~~~---~~~~---~~~~-~v~~sp~~~~ll~~s~-----dg~I~i~D~~t~~~~ 783 (903)
+.+++.|+.+ ..+..||+.+.+.. ..+. .... ..+...++..++.++. ...+..||+.+.+-.
T Consensus 73 ~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~~~~iYv~GG~~~~~~~~~v~~yd~~~~~W~ 152 (323)
T TIGR03548 73 NGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYKDGTLYVGGGNRNGKPSNKSYLFNLETQEWF 152 (323)
T ss_pred CEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEECCEEEEEeCcCCCccCceEEEEcCCCCCee
Confidence 4466667654 35677787766531 1111 1111 1122234445555553 246888998876433
Q ss_pred E--EecCCCCCeEEEEEcCCCCEEEEEeCC-----eEEEEECCCC
Q 002591 784 L--SLQGHTKPIDSVCWDPSGELLASVSED-----SVRVWTVGSG 821 (903)
Q Consensus 784 ~--~l~~h~~~V~sl~~spdg~~lasgs~d-----~I~iwdl~s~ 821 (903)
. .+... ......+..-++++++.|+.+ .+.+||..+.
T Consensus 153 ~~~~~p~~-~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~ 196 (323)
T TIGR03548 153 ELPDFPGE-PRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKN 196 (323)
T ss_pred ECCCCCCC-CCCcceEEEECCEEEEEcCCCCccccceEEEecCCC
Confidence 2 12111 111222223346666666643 3568888764
No 445
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.57 E-value=8 Score=46.26 Aligned_cols=190 Identities=13% Similarity=0.077 Sum_probs=91.6
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 623 TSKVICCHFSSDGK-LLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 623 ~~~V~~l~fspdg~-~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
.+...+|..+|... -++ +.--.|+||++ +|..+..+.-....+..+.|+.+. .|++...||+++||++.. ..+
T Consensus 43 ~gGpIAV~r~p~~~~~~~--~a~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g--e~i 116 (829)
T KOG2280|consen 43 FGGPIAVTRSPSKLVPLY--SARPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG--EFI 116 (829)
T ss_pred cCCceEEEeccccccccc--ccceeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch--hhh
Confidence 34455555555321 111 23345888886 466666655555588999999765 666778899999999974 222
Q ss_pred EEe----ccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeec-C---ceeEEEe---cCC-CEEEEEEc-
Q 002591 702 RTF----MGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKG-G---TAQMRFQ---PHL-GRYLAAAA- 768 (903)
Q Consensus 702 ~~~----~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~-~---~~~v~~s---p~~-~~ll~~s~- 768 (903)
..+ ......|..+.|..+| ++ .-..+|.|.+-+-.....++.++. + ....+|. +.. ..++..-.
T Consensus 117 e~~svg~e~~~~~I~ec~~f~~G--Va-vlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~ 193 (829)
T KOG2280|consen 117 ESNSVGFESQMSDIVECRFFHNG--VA-VLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDV 193 (829)
T ss_pred cccccccccccCceeEEEEecCc--eE-EEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeech
Confidence 221 1122335545554444 32 223345554433222222222221 1 1112222 111 11111111
Q ss_pred CCeEEEEECCCC-eEEEEecCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 002591 769 ENVVSILDAETQ-ACRLSLQGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 769 dg~I~i~D~~t~-~~~~~l~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~ 821 (903)
.-...++-..+. .....+......+.-+..+|+..+|+--... .|.+-++...
T Consensus 194 ~v~~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~ 248 (829)
T KOG2280|consen 194 AVGLHICQVEESRVQLHALSWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLS 248 (829)
T ss_pred hhhhcccceecccccccccCCCCceEEEEEEcCCcceEEEEecCCcEEEEecchh
Confidence 000111111111 1111122223567778899999988887766 7777766543
No 446
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=93.51 E-value=20 Score=42.41 Aligned_cols=245 Identities=14% Similarity=0.131 Sum_probs=119.9
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCc--eeEEeccC-CCCeEEEEECCCC-CEEEEEeC--CCcEEEEeCCCCCceeEEec
Q 002591 632 SSDGKLLATGGHDKKAVLWHTDTLK--SKTNLEEH-SSLITDVRFSPSM-PRLATSSF--DKTVRVWDADNPGYSLRTFM 705 (903)
Q Consensus 632 spdg~~Latgs~Dg~V~vWd~~t~~--~~~~l~~h-~~~V~~l~fspdg-~~Lasgs~--Dg~I~IWDl~~~~~~~~~~~ 705 (903)
..++..++.+..+|.+....+.... .....-+. ....+++++..++ .+|+.|+. |+.+.-|.... -..+..+.
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~-l~~~~~~~ 297 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSN-LEVLDSLP 297 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESES-EEEEEEE-
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCC-cEEEEecc
Confidence 4567789999999999888776422 11222222 5556777776665 47777776 44455555322 23333444
Q ss_pred cCCCceEEEEecCC---CC-------eEEEEEe--CCCcEEEEEcCCCee---eEEeec-CceeEEEecC---CCEEEEE
Q 002591 706 GHSASVMSLDFHPN---KD-------DLICSCD--GDGEIRYWSINNGSC---TRVFKG-GTAQMRFQPH---LGRYLAA 766 (903)
Q Consensus 706 ~h~~~V~sl~fsp~---~~-------~ll~sgs--~Dg~I~iwDi~t~~~---~~~~~~-~~~~v~~sp~---~~~ll~~ 766 (903)
.-++|.++++... +. .++++++ .+|.+++..-.-+-. ...... ++..+-..+. ...+++.
T Consensus 298 -N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~ 376 (504)
T PF10433_consen 298 -NWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVL 376 (504)
T ss_dssp ----SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEE
T ss_pred -CcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEE
Confidence 4577888888532 12 4554443 467888874321111 111111 1222221111 1334444
Q ss_pred EcCCeEEEEECC---CCeEEEEec--CC---CCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeec-CCCce
Q 002591 767 AAENVVSILDAE---TQACRLSLQ--GH---TKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSC-NGNKF 837 (903)
Q Consensus 767 s~dg~I~i~D~~---t~~~~~~l~--~h---~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~-~~~~i 837 (903)
+....-+++.+. ..+.+..+. +. ...+.+..+. +.+++=.+...|++.+.... .....+.. .+..|
T Consensus 377 S~~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~~~i~l~~~~~~---~~~~~w~~~~~~~I 451 (504)
T PF10433_consen 377 SFPNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTPKGIRLIDLEDG---KLTQEWKPPAGSII 451 (504)
T ss_dssp EESSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEESSEEEEEESSST---SEEEEEE-TTS---
T ss_pred EcCCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEecCeEEEEECCCC---eEEEEEeCCCCCeE
Confidence 444444455442 333332221 11 1223333333 56777777778999987654 33333322 23444
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEc-----cCCCCEEEEEEec
Q 002591 838 HSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLT-----AHEGLIAALAVST 885 (903)
Q Consensus 838 ~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~-----~h~~~V~sl~~sp 885 (903)
.+++. ++.+++++..++.+.++.+...... ... .....|.|+...|
T Consensus 452 ~~a~~--~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 452 VAASI--NDPQVLVALSGGELVYFELDDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp SEEEE--SSSEEEEEE-TTEEEEEEEETTEEEEEEE----EE-SS-EEEEE---
T ss_pred EEEEE--CCCEEEEEEeCCcEEEEEEECCceeeeeeccccccCCCceEEEEeCC
Confidence 44444 3467888888999999998877765 211 2567888888765
No 447
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=93.41 E-value=0.026 Score=62.98 Aligned_cols=139 Identities=12% Similarity=0.196 Sum_probs=100.8
Q ss_pred eEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEe
Q 002591 668 ITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVF 747 (903)
Q Consensus 668 V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~ 747 (903)
-....|.+.+..++.++.+..|..||-.. ..+... ..++....++|..+++.+++.+-..+.+.+||+.+...-..-
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~ag--q~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE 113 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAG--QVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLE 113 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhc--ceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHh
Confidence 34456777777799999899999998763 222222 245566779999888888888888999999999865322111
Q ss_pred ecC---ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEe
Q 002591 748 KGG---TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVS 809 (903)
Q Consensus 748 ~~~---~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs 809 (903)
.++ ..-..|++....++.+...+.+.|+...+.+.+.....|...+++++|.+.+..+...+
T Consensus 114 ~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~dc 178 (615)
T KOG2247|consen 114 SGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILCDC 178 (615)
T ss_pred ccCcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccceeeecCc
Confidence 111 12256888888888888899999999988877776666999999999999765544433
No 448
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=93.41 E-value=8.6 Score=42.87 Aligned_cols=77 Identities=8% Similarity=0.029 Sum_probs=42.8
Q ss_pred EEEEecCCCCCeEEEEEcC-------CCCEEEEEeCC-eEEEEECCCCCCcceEEEe-ecCCCceEEEEEeCCCCEEEEE
Q 002591 782 CRLSLQGHTKPIDSVCWDP-------SGELLASVSED-SVRVWTVGSGSEGECVHEL-SCNGNKFHSCVFHPTYPSLLVI 852 (903)
Q Consensus 782 ~~~~l~~h~~~V~sl~~sp-------dg~~lasgs~d-~I~iwdl~s~~~~~~i~~~-~~~~~~i~si~~sp~g~~l~t~ 852 (903)
++..+..| ..+..+.|.. .|.+|++.-.. .|...++...........+ ......+..+++.|||..+++.
T Consensus 245 P~~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~ 323 (331)
T PF07995_consen 245 PVFAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSD 323 (331)
T ss_dssp -SEEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE
T ss_pred cceeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEE
Confidence 33444434 4555666653 34566665555 7777777644222222222 2334478999999999877777
Q ss_pred ECCCeEE
Q 002591 853 GCYQSLE 859 (903)
Q Consensus 853 s~dg~I~ 859 (903)
..+|.|+
T Consensus 324 d~~G~iy 330 (331)
T PF07995_consen 324 DSDGKIY 330 (331)
T ss_dssp -TTTTEE
T ss_pred CCCCeEe
Confidence 7777764
No 449
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=93.40 E-value=14 Score=41.01 Aligned_cols=141 Identities=12% Similarity=0.227 Sum_probs=80.4
Q ss_pred CceEEEEecCCCCeEEEEEeCCCc------EEEEEcCCC----eee---EE--ee-----------cCceeEEEecCCCE
Q 002591 709 ASVMSLDFHPNKDDLICSCDGDGE------IRYWSINNG----SCT---RV--FK-----------GGTAQMRFQPHLGR 762 (903)
Q Consensus 709 ~~V~sl~fsp~~~~ll~sgs~Dg~------I~iwDi~t~----~~~---~~--~~-----------~~~~~v~~sp~~~~ 762 (903)
+.+..|.+.+++..++ +.+++|. +..+++... ..+ .. +. .....+++.+++..
T Consensus 20 GGlSgl~~~~~~~~~~-avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFY-AVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred CcEeeEEEeCCCCEEE-EEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 4566788876555554 4555666 555554431 000 00 10 13345777566556
Q ss_pred EEEEEcC------CeEEEEECCCCeEEEEec---------------CCCCCeEEEEEcCCCCEEEEEeCC--------e-
Q 002591 763 YLAAAAE------NVVSILDAETQACRLSLQ---------------GHTKPIDSVCWDPSGELLASVSED--------S- 812 (903)
Q Consensus 763 ll~~s~d------g~I~i~D~~t~~~~~~l~---------------~h~~~V~sl~~spdg~~lasgs~d--------~- 812 (903)
+++.-.+ ..|+.+|.. ++.+..+. .....+.+++++|+|+.|+++.+. .
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~ 177 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRAN 177 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccc
Confidence 6555556 688888876 55544331 133468899999999965554321 1
Q ss_pred ------EEEEECCCCC----CcceEEEeec-----CCCceEEEEEeCCCCEEEE
Q 002591 813 ------VRVWTVGSGS----EGECVHELSC-----NGNKFHSCVFHPTYPSLLV 851 (903)
Q Consensus 813 ------I~iwdl~s~~----~~~~i~~~~~-----~~~~i~si~~sp~g~~l~t 851 (903)
++|+.+.... .......+.. ....+..+.+-+++++|+.
T Consensus 178 ~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 178 PDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred cccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 5555554322 1222333332 4677899999999986654
No 450
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=93.31 E-value=0.052 Score=64.56 Aligned_cols=119 Identities=18% Similarity=0.239 Sum_probs=76.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEE-----------ECCCCCEEEEEeCCCcEEEEe
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVR-----------FSPSMPRLATSSFDKTVRVWD 693 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~-----------fspdg~~Lasgs~Dg~I~IWD 693 (903)
.|.-+-|-++.-++..+-.+++|+|..+++... ..+++|...+++++ .+|||+.|+.++.||.++.|-
T Consensus 185 ~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Q 263 (1283)
T KOG1916|consen 185 LVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQ 263 (1283)
T ss_pred eeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceee
Confidence 344444455667888888899999887764332 45566877776655 488999999999999999887
Q ss_pred CCCCC----ceeEEeccCC-CceEEEEecCCC---------CeEEEEEeCCCcEEEEEcCCCeee
Q 002591 694 ADNPG----YSLRTFMGHS-ASVMSLDFHPNK---------DDLICSCDGDGEIRYWSINNGSCT 744 (903)
Q Consensus 694 l~~~~----~~~~~~~~h~-~~V~sl~fsp~~---------~~ll~sgs~Dg~I~iwDi~t~~~~ 744 (903)
+.-.+ .|+..++.|+ .+-.|.-|+... ..+|-+...+..+++|.....+|.
T Consensus 264 iyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 264 IYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred eeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 64322 3455566666 222222233221 112333444677999988777776
No 451
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.27 E-value=23 Score=42.26 Aligned_cols=198 Identities=12% Similarity=0.077 Sum_probs=107.3
Q ss_pred CeEEEEECCCCCEEEEEeC-----CCcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCc----EEEEE
Q 002591 667 LITDVRFSPSMPRLATSSF-----DKTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGE----IRYWS 737 (903)
Q Consensus 667 ~V~~l~fspdg~~Lasgs~-----Dg~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~----I~iwD 737 (903)
.+-.++.+||.+++|-+-. .-++++.|+.++......+. +...+++|..++..++++-..++. |....
T Consensus 130 ~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i~---~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~ 206 (682)
T COG1770 130 SLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEIT---NTSGSFAWAADGKTLFYTRLDENHRPDKVWRHR 206 (682)
T ss_pred eeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhhc---ccccceEEecCCCeEEEEEEcCCCCcceEEEEe
Confidence 3566788899988876532 34688999988544333333 345669999999989888776652 33333
Q ss_pred cCC--CeeeEEeecC--c--eeEEEecCCCEEEEEEcC---CeEEEEECCCCeEE--EEecCCCCCeEEEEEcCCCCEEE
Q 002591 738 INN--GSCTRVFKGG--T--AQMRFQPHLGRYLAAAAE---NVVSILDAETQACR--LSLQGHTKPIDSVCWDPSGELLA 806 (903)
Q Consensus 738 i~t--~~~~~~~~~~--~--~~v~~sp~~~~ll~~s~d---g~I~i~D~~t~~~~--~~l~~h~~~V~sl~~spdg~~la 806 (903)
+.+ ..-..+++.. . ..+.-+....+|+....+ ..+++.+....... .......+--..+ ...+.+++
T Consensus 207 ~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~--eh~~d~f~ 284 (682)
T COG1770 207 LGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEYSV--EHGGDRFY 284 (682)
T ss_pred cCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCcEEee--eecCcEEE
Confidence 333 2222233322 1 223334445566665533 47778877665322 1111111111111 12244333
Q ss_pred EEeC--C-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCC---eEEEEECCCCcEE
Q 002591 807 SVSE--D-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQ---SLELWNMSENKTM 869 (903)
Q Consensus 807 sgs~--d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg---~I~vwdl~~~~~~ 869 (903)
.-+. + ..+|+..........-..+..|...+.--.|+--.++|+....++ .|++++..++...
T Consensus 285 i~sN~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~ 353 (682)
T COG1770 285 ILSNADGKNFKLVRAPVSADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEER 353 (682)
T ss_pred EEecCCCcceEEEEccCCCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCCcee
Confidence 3322 2 455555443111223334455566666666666777788776654 7889998877655
No 452
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.14 E-value=6.3 Score=47.08 Aligned_cols=174 Identities=14% Similarity=0.231 Sum_probs=87.3
Q ss_pred CcEEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE------EeecCceeEEEecCC
Q 002591 687 KTVRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR------VFKGGTAQMRFQPHL 760 (903)
Q Consensus 687 g~I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~------~~~~~~~~v~~sp~~ 760 (903)
-.|+||++. +..+..+.-....+..+.|+.+. .+| +...||++++|++-...... .....+..+.+.. +
T Consensus 64 ~~I~If~~s--G~lL~~~~w~~~~lI~mgWs~~e-eLI-~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~-~ 138 (829)
T KOG2280|consen 64 PYIRIFNIS--GQLLGRILWKHGELIGMGWSDDE-ELI-CVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFH-N 138 (829)
T ss_pred eeEEEEecc--ccchHHHHhcCCCeeeecccCCc-eEE-EEeccceEEEeecchhhhcccccccccccCceeEEEEec-C
Confidence 347888876 44444444333478889999764 355 67789999999986432221 1111233333333 3
Q ss_pred CEEEEEEcCCeEE-EEECCCCeEEEEecC-CCCCeEEEEEc---CCCC--EEEEEeCC-eEEEEECCCCCCcceEEEeec
Q 002591 761 GRYLAAAAENVVS-ILDAETQACRLSLQG-HTKPIDSVCWD---PSGE--LLASVSED-SVRVWTVGSGSEGECVHELSC 832 (903)
Q Consensus 761 ~~ll~~s~dg~I~-i~D~~t~~~~~~l~~-h~~~V~sl~~s---pdg~--~lasgs~d-~I~iwdl~s~~~~~~i~~~~~ 832 (903)
+..+ -..+|.|. +.+..+. .+.++.. ......+.||. |... .++-.... ...++-..... .....+..
T Consensus 139 GVav-lt~~g~v~~i~~~~~~-~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~--~q~~~~~~ 214 (829)
T KOG2280|consen 139 GVAV-LTVSGQVILINGVEEP-KLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESR--VQLHALSW 214 (829)
T ss_pred ceEE-EecCCcEEEEcCCCcc-hhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceeccc--ccccccCC
Confidence 3333 33344444 3343332 2222221 11111112232 2111 11111100 11112111110 11122222
Q ss_pred CCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 833 NGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 833 ~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
....+..|..+|+.++|+.-...|.|.+-+++..++.
T Consensus 215 ~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~l 251 (829)
T KOG2280|consen 215 PNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQIL 251 (829)
T ss_pred CCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhh
Confidence 2456888999999999999999999999988776655
No 453
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=93.14 E-value=21 Score=42.92 Aligned_cols=152 Identities=13% Similarity=0.177 Sum_probs=80.3
Q ss_pred eecCceeEEEecCCCEEEEEEcCCeEEEEECCCCe--EEEEecC-CCCCeEEEEEcC------CCCEEEEEeC---C--e
Q 002591 747 FKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQA--CRLSLQG-HTKPIDSVCWDP------SGELLASVSE---D--S 812 (903)
Q Consensus 747 ~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~--~~~~l~~-h~~~V~sl~~sp------dg~~lasgs~---d--~ 812 (903)
++..+..+.+..++..+++....|.|.+||...+. .+..+.. +...|.--+|-+ ...++++.+. + .
T Consensus 128 l~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~ 207 (670)
T PF10395_consen 128 LDDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLS 207 (670)
T ss_pred cccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEE
Confidence 45667778899999999999999999999993322 1112221 222111112222 2234444333 2 7
Q ss_pred EEEEECCCCCCcceEEEee---cCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE---EEc---cCC-CCEEEEE
Q 002591 813 VRVWTVGSGSEGECVHELS---CNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM---TLT---AHE-GLIAALA 882 (903)
Q Consensus 813 I~iwdl~s~~~~~~i~~~~---~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~---~~~---~h~-~~V~sl~ 882 (903)
++++.+... ...+.++. .+......+.|+-....|+.- .++.|.+|++...+.. .+. ... ..+.++.
T Consensus 208 ykL~~l~~~--~~~~~El~s~~~e~~~~~~s~f~Y~~G~LY~l-~~~~i~~ysip~f~~~~tI~l~~ii~~~~~~~vSl~ 284 (670)
T PF10395_consen 208 YKLISLSNE--SSSIFELSSTILENFGLEDSKFCYQFGKLYQL-SKKTISSYSIPNFQIQKTISLPSIIDKESDDLVSLK 284 (670)
T ss_pred EEEEEeccC--CcceEEeehheeccCCcccceEEEeCCEEEEE-eCCEEEEEEcCCceEEEEEEechhhccccccceEee
Confidence 888988221 12222222 223333444444434444444 7789999999877654 222 111 2344444
Q ss_pred EecCCCEEEEEecCCcEEEcC
Q 002591 883 VSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 883 ~spdg~~LaSgs~DG~I~IWd 903 (903)
--...+.|++. +..|++.|
T Consensus 285 ~~s~nRvLLs~--~nkIyLld 303 (670)
T PF10395_consen 285 PPSPNRVLLSV--NNKIYLLD 303 (670)
T ss_pred cCCCCeEEEEc--CCEEEEEe
Confidence 32234444443 55677654
No 454
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=92.85 E-value=13 Score=41.59 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=23.4
Q ss_pred eEEEEECCCCcEEEEccCCCC-EEEEEEecCCCEEEEEecCC
Q 002591 857 SLELWNMSENKTMTLTAHEGL-IAALAVSTETGYVASASHDK 897 (903)
Q Consensus 857 ~I~vwdl~~~~~~~~~~h~~~-V~sl~~spdg~~LaSgs~DG 897 (903)
.+.+||..+.+...+...... -...++.-++++++.|+.+.
T Consensus 291 ~~e~yd~~~~~W~~~~~lp~~~~~~~~~~~~~~iyv~GG~~~ 332 (346)
T TIGR03547 291 SSEVYALDNGKWSKVGKLPQGLAYGVSVSWNNGVLLIGGENS 332 (346)
T ss_pred EeeEEEecCCcccccCCCCCCceeeEEEEcCCEEEEEeccCC
Confidence 577899887765433322221 12223345788888887653
No 455
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=92.79 E-value=3.8 Score=42.02 Aligned_cols=55 Identities=15% Similarity=0.161 Sum_probs=39.7
Q ss_pred EecCC-CEEEEEEcCCeEEEEECC--CCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC
Q 002591 756 FQPHL-GRYLAAAAENVVSILDAE--TQACRLSLQGHTKPIDSVCWDPSGELLASVSED 811 (903)
Q Consensus 756 ~sp~~-~~ll~~s~dg~I~i~D~~--t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d 811 (903)
+...+ +.++++.....|.+|++. ....+..|.. -+.|..+.++..|+||++--.+
T Consensus 23 ~c~~g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~T-v~~V~~l~y~~~GDYlvTlE~k 80 (215)
T PF14761_consen 23 VCCGGPDALFVAASGCKVEVYDLEQEECPLLCTFST-VGRVLQLVYSEAGDYLVTLEEK 80 (215)
T ss_pred eeccCCceEEEEcCCCEEEEEEcccCCCceeEEEcc-hhheeEEEeccccceEEEEEee
Confidence 33334 556666778889999988 3355566653 4788999999999999987543
No 456
>PLN02193 nitrile-specifier protein
Probab=92.79 E-value=10 Score=44.51 Aligned_cols=148 Identities=6% Similarity=-0.061 Sum_probs=72.3
Q ss_pred CCeEEEEEeCC-----CcEEEEEcCCCeeeEEeec-----Cc-eeEEEecCCCEEEEEEcC-----CeEEEEECCCCeEE
Q 002591 720 KDDLICSCDGD-----GEIRYWSINNGSCTRVFKG-----GT-AQMRFQPHLGRYLAAAAE-----NVVSILDAETQACR 783 (903)
Q Consensus 720 ~~~ll~sgs~D-----g~I~iwDi~t~~~~~~~~~-----~~-~~v~~sp~~~~ll~~s~d-----g~I~i~D~~t~~~~ 783 (903)
++.+++.|+.+ ..+.+||+.+.+....... .. ........+..++.++.+ ..+..||+.+.+-.
T Consensus 228 ~~~lYvfGG~~~~~~~ndv~~yD~~t~~W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~ 307 (470)
T PLN02193 228 GSTLYVFGGRDASRQYNGFYSFDTTTNEWKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWF 307 (470)
T ss_pred CCEEEEECCCCCCCCCccEEEEECCCCEEEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEE
Confidence 34566677654 3588899988765432211 11 111222334455555543 35778888776533
Q ss_pred EEec-----CCCCCeEEEEEcCCCCEEEEEeC-----CeEEEEECCCCCCcceEEEee--cCCCceEEEEEeCCCCEEEE
Q 002591 784 LSLQ-----GHTKPIDSVCWDPSGELLASVSE-----DSVRVWTVGSGSEGECVHELS--CNGNKFHSCVFHPTYPSLLV 851 (903)
Q Consensus 784 ~~l~-----~h~~~V~sl~~spdg~~lasgs~-----d~I~iwdl~s~~~~~~i~~~~--~~~~~i~si~~sp~g~~l~t 851 (903)
..-. ..... ..++. -++++++.++. +.+.+||+.+..- ..+.... .......+++ .-+++.++.
T Consensus 308 ~~~~~~~~~~~R~~-~~~~~-~~gkiyviGG~~g~~~~dv~~yD~~t~~W-~~~~~~g~~P~~R~~~~~~-~~~~~iyv~ 383 (470)
T PLN02193 308 HCSTPGDSFSIRGG-AGLEV-VQGKVWVVYGFNGCEVDDVHYYDPVQDKW-TQVETFGVRPSERSVFASA-AVGKHIVIF 383 (470)
T ss_pred eCCCCCCCCCCCCC-cEEEE-ECCcEEEEECCCCCccCceEEEECCCCEE-EEeccCCCCCCCcceeEEE-EECCEEEEE
Confidence 2110 01111 12222 24666655542 2588999876521 1111110 0011122222 235566666
Q ss_pred EECC--------------CeEEEEECCCCcEEEE
Q 002591 852 IGCY--------------QSLELWNMSENKTMTL 871 (903)
Q Consensus 852 ~s~d--------------g~I~vwdl~~~~~~~~ 871 (903)
|+.. ..+.+||+.+.+...+
T Consensus 384 GG~~~~~~~~~~~~~~~~ndv~~~D~~t~~W~~~ 417 (470)
T PLN02193 384 GGEIAMDPLAHVGPGQLTDGTFALDTETLQWERL 417 (470)
T ss_pred CCccCCccccccCccceeccEEEEEcCcCEEEEc
Confidence 6643 2588999988876543
No 457
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=92.70 E-value=5.5 Score=46.11 Aligned_cols=268 Identities=15% Similarity=0.066 Sum_probs=123.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCcee
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSL 701 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~-~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~ 701 (903)
..+|.++.|.-.| .|.+|+.|| +..||..+++.+..-.... .+|..+.-+-.+ .|.+|+++| |++.+.+.....-
T Consensus 164 d~~V~aLv~D~~g-~lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~sn 239 (671)
T COG3292 164 DTPVVALVFDANG-RLWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRASN 239 (671)
T ss_pred CccceeeeeeccC-cEEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhhccccc
Confidence 3468888888777 566677776 6677877777665544433 566666655555 566677666 7777766411110
Q ss_pred EEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee--cCceeE-E-EecCCCEEEEEEcCCeEEEEEC
Q 002591 702 RTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQM-R-FQPHLGRYLAAAAENVVSILDA 777 (903)
Q Consensus 702 ~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~--~~~~~v-~-~sp~~~~ll~~s~dg~I~i~D~ 777 (903)
.-..-....|..+.-...|. +..|++.|..+.--.+.+-.....+ .....+ . +....+.+.+++.++.+++-+.
T Consensus 240 ~~~~lp~~~I~ll~qD~qG~--lWiGTenGl~r~~l~rq~Lq~~~~~~~l~~S~vnsL~~D~dGsLWv~t~~giv~~~~a 317 (671)
T COG3292 240 WGPMLPSGNILLLVQDAQGE--LWIGTENGLWRTRLPRQGLQIPLSKMHLGVSTVNSLWLDTDGSLWVGTYGGIVRYLTA 317 (671)
T ss_pred cCCCCcchheeeeecccCCC--EEEeecccceeEecCCCCccccccccCCccccccceeeccCCCEeeeccCceEEEecc
Confidence 11111233444444443443 2345555544332222211111111 111111 1 2233456677777776666543
Q ss_pred CCCeEEEEecCCCC-CeEEEEEcC---CCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEE
Q 002591 778 ETQACRLSLQGHTK-PIDSVCWDP---SGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIG 853 (903)
Q Consensus 778 ~t~~~~~~l~~h~~-~V~sl~~sp---dg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s 853 (903)
. ......+...++ .+-.++..| +.......+.+.+.+-+-.++.....++... ...|+.+++..++ .+-.++
T Consensus 318 ~-w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~q~R--g~nit~~~~d~~g-~lWlgs 393 (671)
T COG3292 318 D-WKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVHQLR--GMNITTTLEDSRG-RLWLGS 393 (671)
T ss_pred h-hhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEeeecc--ccccchhhhccCC-cEEEEe
Confidence 2 111111111111 111111111 0000111011111222222221111122221 3345555666644 466666
Q ss_pred CCCeEEEEECCC-CcEEEEc--cCCCCEEEEEEecCCCEEEEEecCCcEEE
Q 002591 854 CYQSLELWNMSE-NKTMTLT--AHEGLIAALAVSTETGYVASASHDKFVKL 901 (903)
Q Consensus 854 ~dg~I~vwdl~~-~~~~~~~--~h~~~V~sl~~spdg~~LaSgs~DG~I~I 901 (903)
..+-+..|+..+ +-..... ...+.|..+.-.|+++ |..|+.+|.+++
T Consensus 394 ~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk~ 443 (671)
T COG3292 394 MQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVKR 443 (671)
T ss_pred cccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEec
Confidence 665566677666 3333221 2456788888889888 667777887653
No 458
>PHA02790 Kelch-like protein; Provisional
Probab=92.69 E-value=2.3 Score=50.12 Aligned_cols=176 Identities=7% Similarity=-0.027 Sum_probs=81.5
Q ss_pred CCEEEEEeCCC-----cEEEEECCCCcee--EEeccCCCCeEEEEECCCCCEEEEEeCC--CcEEEEeCCCCCceeEEec
Q 002591 635 GKLLATGGHDK-----KAVLWHTDTLKSK--TNLEEHSSLITDVRFSPSMPRLATSSFD--KTVRVWDADNPGYSLRTFM 705 (903)
Q Consensus 635 g~~Latgs~Dg-----~V~vWd~~t~~~~--~~l~~h~~~V~~l~fspdg~~Lasgs~D--g~I~IWDl~~~~~~~~~~~ 705 (903)
+.++++|+.++ ++..||..+..-. ..+.........+. -++...+.|+.+ ..+..||..++.. ....
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W--~~~~ 347 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAW--VNMP 347 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeE--EECC
Confidence 45566676543 4667887654322 22221111122222 356677777754 4578888765322 1111
Q ss_pred cCCCce--EEEEecCCCCeEEEEEeCCC---cEEEEEcCCCeeeEEeec--CceeEEEecCCCEEEEEEcCCeEEEEECC
Q 002591 706 GHSASV--MSLDFHPNKDDLICSCDGDG---EIRYWSINNGSCTRVFKG--GTAQMRFQPHLGRYLAAAAENVVSILDAE 778 (903)
Q Consensus 706 ~h~~~V--~sl~fsp~~~~ll~sgs~Dg---~I~iwDi~t~~~~~~~~~--~~~~v~~sp~~~~ll~~s~dg~I~i~D~~ 778 (903)
.-..+. .+++.. ++.+.+.|+.++ .+..||.++.+....-.. +....+...-++.+++.+ |.+.+||.+
T Consensus 348 ~l~~~r~~~~~~~~--~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G--G~~e~ydp~ 423 (480)
T PHA02790 348 SLLKPRCNPAVASI--NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG--RNAEFYCES 423 (480)
T ss_pred CCCCCCcccEEEEE--CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC--CceEEecCC
Confidence 111111 112222 345666777553 477889887664432111 111111112234444443 457788887
Q ss_pred CCeEEE--EecCCCCCeEEEEEcCCCCEEEEEeCC------eEEEEECCC
Q 002591 779 TQACRL--SLQGHTKPIDSVCWDPSGELLASVSED------SVRVWTVGS 820 (903)
Q Consensus 779 t~~~~~--~l~~h~~~V~sl~~spdg~~lasgs~d------~I~iwdl~s 820 (903)
+.+-.. .+....... +++. -++++.+.|+.+ .|.+||..+
T Consensus 424 ~~~W~~~~~m~~~r~~~-~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~~ 471 (480)
T PHA02790 424 SNTWTLIDDPIYPRDNP-ELII-VDNKLLLIGGFYRGSYIDTIEVYNNRT 471 (480)
T ss_pred CCcEeEcCCCCCCcccc-EEEE-ECCEEEEECCcCCCcccceEEEEECCC
Confidence 764432 221111122 2222 246666666532 456666654
No 459
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.60 E-value=7.3 Score=39.58 Aligned_cols=168 Identities=14% Similarity=0.155 Sum_probs=90.7
Q ss_pred CCCEEEEEeC--CCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEE-eCCCcEEEEeCCCCCceeEEeccCCCc
Q 002591 634 DGKLLATGGH--DKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATS-SFDKTVRVWDADNPGYSLRTFMGHSAS 710 (903)
Q Consensus 634 dg~~Latgs~--Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasg-s~Dg~I~IWDl~~~~~~~~~~~~h~~~ 710 (903)
+|.++.+.+. ...|++||+.+++.+..-.-....+..=-...-+.++..- =.+|...+||.++ -+++..+. ..+.
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t-~~~lg~~~-y~Ge 132 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADT-LEELGRFS-YEGE 132 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHH-hhhhcccc-cCCc
Confidence 5566666553 3479999999988877654332122111111123333333 3378888899887 44454444 3344
Q ss_pred eEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee----c----CceeEEEecCCCEEEE-EEcCCeEEEEECCCCe
Q 002591 711 VMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK----G----GTAQMRFQPHLGRYLA-AAAENVVSILDAETQA 781 (903)
Q Consensus 711 V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~----~----~~~~v~~sp~~~~ll~-~s~dg~I~i~D~~t~~ 781 (903)
=+.++. ++..++ .++...+++.-|.++.....+.. + ..+.+.|. + +.+++ .-.+..|...|..+|+
T Consensus 133 GWgLt~--d~~~Li-msdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-d-G~lyANVw~t~~I~rI~p~sGr 207 (262)
T COG3823 133 GWGLTS--DDKNLI-MSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-D-GELYANVWQTTRIARIDPDSGR 207 (262)
T ss_pred ceeeec--CCcceE-eeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-c-cEEEEeeeeecceEEEcCCCCc
Confidence 555654 345565 45445677777776654333321 1 11112221 1 23333 2335566666777777
Q ss_pred EEEEec------------CCCCCeEEEEEcCCCC-EEEEE
Q 002591 782 CRLSLQ------------GHTKPIDSVCWDPSGE-LLASV 808 (903)
Q Consensus 782 ~~~~l~------------~h~~~V~sl~~spdg~-~lasg 808 (903)
.+..+. .|....+.|++.|++. ++++|
T Consensus 208 V~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 208 VVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred EEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 665442 2445678899999885 44444
No 460
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=92.50 E-value=3.2 Score=49.71 Aligned_cols=109 Identities=12% Similarity=0.203 Sum_probs=69.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEe--CCCCEEEEEECCCeEEEEECC---
Q 002591 791 KPIDSVCWDPSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFH--PTYPSLLVIGCYQSLELWNMS--- 864 (903)
Q Consensus 791 ~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s--p~g~~l~t~s~dg~I~vwdl~--- 864 (903)
....-+.-+.-++..++.+.. .+.|||.+.+. .+.-..+ .....|.++.|. |++..+++.|..+.|.+|--.
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~-lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~d 107 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGV-LEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYD 107 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcE-EEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchh
Confidence 344444444445544444444 89999998763 1111222 346778888874 689999999999999998532
Q ss_pred --CC-------cEEEEccCC-CCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 865 --EN-------KTMTLTAHE-GLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 865 --~~-------~~~~~~~h~-~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
.. +.+.+..|+ .+|.+.+|.++|.+++.++ +.+.|++
T Consensus 108 y~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~d 154 (631)
T PF12234_consen 108 YTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFD 154 (631)
T ss_pred hhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEEC
Confidence 11 122344555 6899999999997666553 3465553
No 461
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=92.26 E-value=16 Score=41.57 Aligned_cols=14 Identities=7% Similarity=0.145 Sum_probs=10.1
Q ss_pred cEEEEEcCCCeeeE
Q 002591 732 EIRYWSINNGSCTR 745 (903)
Q Consensus 732 ~I~iwDi~t~~~~~ 745 (903)
.|.+||..+.+...
T Consensus 190 ~v~~YD~~t~~W~~ 203 (376)
T PRK14131 190 EVLSYDPSTNQWKN 203 (376)
T ss_pred eEEEEECCCCeeeE
Confidence 58889988776543
No 462
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=92.25 E-value=0.41 Score=36.68 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=28.5
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 002591 665 SSLITDVRFSPSMPRLATSSFDKTVRVWDAD 695 (903)
Q Consensus 665 ~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~ 695 (903)
...|.+++|+|...+||.+..||.|.||.++
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~ 41 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN 41 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence 4569999999999999999999999999984
No 463
>COG4247 Phy 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) [Lipid metabolism]
Probab=92.24 E-value=17 Score=38.09 Aligned_cols=190 Identities=18% Similarity=0.215 Sum_probs=105.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEE--CCCCC--EEEEEeC--CCcEEEEeCCCCCc
Q 002591 626 VICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRF--SPSMP--RLATSSF--DKTVRVWDADNPGY 699 (903)
Q Consensus 626 V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~f--spdg~--~Lasgs~--Dg~I~IWDl~~~~~ 699 (903)
|+--+-+|+...+++....+-++|||+. ++.+..+....-.-.++.+ --.|. .|+++|. ..+|.+|.++....
T Consensus 58 IwVh~t~P~kS~vItt~Kk~Gl~VYDLs-GkqLqs~~~Gk~NNVDLrygF~LgG~~idiaaASdR~~~~i~~y~Idp~~~ 136 (364)
T COG4247 58 IWVHATNPDKSLVITTVKKAGLRVYDLS-GKQLQSVNPGKYNNVDLRYGFQLGGQSIDIAAASDRQNDKIVFYKIDPNPQ 136 (364)
T ss_pred eEeccCCcCcceEEEeeccCCeEEEecC-CCeeeecCCCcccccccccCcccCCeEEEEEecccccCCeEEEEEeCCCcc
Confidence 4444446777788888888889999986 5666665433222222222 12233 2455543 56788998876444
Q ss_pred eeEEeccC-------CCceEEEEecC--C-CCeEEEEEeCCCcEEEEEcCC---C----eeeEEeecC--ceeEEEecCC
Q 002591 700 SLRTFMGH-------SASVMSLDFHP--N-KDDLICSCDGDGEIRYWSINN---G----SCTRVFKGG--TAQMRFQPHL 760 (903)
Q Consensus 700 ~~~~~~~h-------~~~V~sl~fsp--~-~~~ll~sgs~Dg~I~iwDi~t---~----~~~~~~~~~--~~~v~~sp~~ 760 (903)
.+..+... ...++.++... . +.+++++...+|.|+-|.+.. + +.++.|+.. ...+......
T Consensus 137 ~L~sitD~n~p~ss~~s~~YGl~lyrs~ktgd~yvfV~~~qG~~~Qy~l~d~gnGkv~~k~vR~fk~~tQTEG~VaDdEt 216 (364)
T COG4247 137 YLESITDSNAPYSSSSSSAYGLALYRSPKTGDYYVFVNRRQGDIAQYKLIDQGNGKVGTKLVRQFKIPTQTEGMVADDET 216 (364)
T ss_pred ceeeccCCCCccccCcccceeeEEEecCCcCcEEEEEecCCCceeEEEEEecCCceEcceeeEeeecCCcccceeecccc
Confidence 44444422 33455666543 3 566777788899998887643 2 355555543 2333334444
Q ss_pred CEEEEEEcCCeEEEEECC-------CCeEEEEecCC---CCCeE--EEEEcCCCC-EEEEEeCC--eEEEEEC
Q 002591 761 GRYLAAAAENVVSILDAE-------TQACRLSLQGH---TKPID--SVCWDPSGE-LLASVSED--SVRVWTV 818 (903)
Q Consensus 761 ~~ll~~s~dg~I~i~D~~-------t~~~~~~l~~h---~~~V~--sl~~spdg~-~lasgs~d--~I~iwdl 818 (903)
+.+..+-.| +-||... +++.+.++... +..|. .|-+-|+|+ ||+..+.+ +..+|..
T Consensus 217 G~LYIaeEd--vaiWK~~Aep~~G~~g~~idr~~d~~~LtdDvEGltiYy~pnGkGYL~aSSQGnNtya~y~R 287 (364)
T COG4247 217 GFLYIAEED--VAIWKYEAEPNRGNTGRLIDRIKDLSYLTDDVEGLTIYYGPNGKGYLLASSQGNNTYAAYTR 287 (364)
T ss_pred ceEEEeecc--ceeeecccCCCCCCccchhhhhcCchhhcccccccEEEEcCCCcEEEEEecCCCceEEEEEe
Confidence 555555554 4455432 23444433321 12232 356778887 66666655 5555554
No 464
>PLN02153 epithiospecifier protein
Probab=92.15 E-value=8.3 Score=43.10 Aligned_cols=39 Identities=5% Similarity=0.055 Sum_probs=22.0
Q ss_pred CeEEEEECCCCcEEEEccC-----CCCEEEEEEecCCCEEEEEec
Q 002591 856 QSLELWNMSENKTMTLTAH-----EGLIAALAVSTETGYVASASH 895 (903)
Q Consensus 856 g~I~vwdl~~~~~~~~~~h-----~~~V~sl~~spdg~~LaSgs~ 895 (903)
..|.+||..+.+...+... .....++ ..-++++++.|+.
T Consensus 217 ~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~-~~~~~~iyv~GG~ 260 (341)
T PLN02153 217 NAVQFFDPASGKWTEVETTGAKPSARSVFAH-AVVGKYIIIFGGE 260 (341)
T ss_pred CceEEEEcCCCcEEeccccCCCCCCcceeee-EEECCEEEEECcc
Confidence 4689999988876644321 1111222 2235677777774
No 465
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.05 E-value=1.3 Score=54.81 Aligned_cols=121 Identities=13% Similarity=0.065 Sum_probs=74.4
Q ss_pred CeEEEEECCCCeEEE-----EecC------CCCCeEEEEEcCCCC-EEEEEeCC-eEEEEECCCCCCcceEEEeecCCCc
Q 002591 770 NVVSILDAETQACRL-----SLQG------HTKPIDSVCWDPSGE-LLASVSED-SVRVWTVGSGSEGECVHELSCNGNK 836 (903)
Q Consensus 770 g~I~i~D~~t~~~~~-----~l~~------h~~~V~sl~~spdg~-~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~ 836 (903)
-.|+.||+++...-. -+.. ...-..++.|.|.-. ..+.+..| .|++..+.-.. ..+..+ .-...
T Consensus 124 ~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~--~~v~s~-p~t~~ 200 (1405)
T KOG3630|consen 124 EAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLA--QNVTSF-PVTNS 200 (1405)
T ss_pred ceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhh--hhhccc-Ccccc
Confidence 367888887642211 1111 123356778888544 34444455 77777664321 111111 22566
Q ss_pred eEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEc---c-CCCCEEEEEEecCCCEEEEE
Q 002591 837 FHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLT---A-HEGLIAALAVSTETGYVASA 893 (903)
Q Consensus 837 i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~---~-h~~~V~sl~~spdg~~LaSg 893 (903)
.++++|+|.|+.+++|-..|++.-|...-.....+. . ....|.+|+|-..-.++++-
T Consensus 201 ~Tav~WSprGKQl~iG~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvvy 261 (1405)
T KOG3630|consen 201 QTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQEFLVVY 261 (1405)
T ss_pred eeeEEeccccceeeEecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecceeEEEEe
Confidence 889999999999999999999998876544322221 1 24789999998777776653
No 466
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=91.97 E-value=12 Score=42.48 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=20.4
Q ss_pred EEEEECCCCcEEEEccCC-CCEEEEEEecCCCEEEEEecC
Q 002591 858 LELWNMSENKTMTLTAHE-GLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 858 I~vwdl~~~~~~~~~~h~-~~V~sl~~spdg~~LaSgs~D 896 (903)
+.+||..+++...+..-. ..-...+..-++++++.|+..
T Consensus 314 ~e~yd~~~~~W~~~~~lp~~r~~~~av~~~~~iyv~GG~~ 353 (376)
T PRK14131 314 DEIYALVNGKWQKVGELPQGLAYGVSVSWNNGVLLIGGET 353 (376)
T ss_pred hheEEecCCcccccCcCCCCccceEEEEeCCEEEEEcCCC
Confidence 568898877654222111 111122334467777777753
No 467
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=91.91 E-value=35 Score=41.12 Aligned_cols=238 Identities=10% Similarity=0.096 Sum_probs=116.6
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECC-CCceeEEecc-CCCCeEEEEECCC---CCEEEEEeC-CCcEEEEeCCCC---
Q 002591 627 ICCHFSSDGKLLATGGHDKKAVLWHTD-TLKSKTNLEE-HSSLITDVRFSPS---MPRLATSSF-DKTVRVWDADNP--- 697 (903)
Q Consensus 627 ~~l~fspdg~~Latgs~Dg~V~vWd~~-t~~~~~~l~~-h~~~V~~l~fspd---g~~Lasgs~-Dg~I~IWDl~~~--- 697 (903)
.+..++|+...+-.|=....|.-|=+. |.+.+..+.- .+..|.|+..... .++.++|-. .++-++-.+..+
T Consensus 31 vs~~~s~~sn~IdiGIS~S~ISsYIi~PTPKLiwsypi~pt~iV~~~dV~~~~~~~~~~~~glt~rKk~~ll~i~~~~~~ 110 (670)
T PF10395_consen 31 VSDDFSPDSNQIDIGISGSAISSYIIKPTPKLIWSYPISPTTIVECCDVLEKSDGKKLYCVGLTERKKFKLLLIERKVGS 110 (670)
T ss_pred eecccCCCCceEEEEeccchhhheecCCCcceeEeeccCcCceEEEEEeEecCCCcEEEEEEEeeCCeeEEEEEEccCcc
Confidence 334667777776666555566656554 5666666553 4455677765332 234444433 333343333221
Q ss_pred -------Cc--eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeE--Eeec-CceeEEEe--------
Q 002591 698 -------GY--SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTR--VFKG-GTAQMRFQ-------- 757 (903)
Q Consensus 698 -------~~--~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~--~~~~-~~~~v~~s-------- 757 (903)
.. ....++ -.+.|..|.|..++.. +++...+|.|.+||...+.... ..+. ....+.|+
T Consensus 111 ~~~~~~~~e~~~~~~~k-l~~kvv~Ik~~~~~~~-I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~ 188 (670)
T PF10395_consen 111 TEDGTVNSETTNEFELK-LDDKVVGIKFSSDGKI-IYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFEL 188 (670)
T ss_pred ccccccCccccceEEEE-cccceEEEEEecCCCE-EEEEEcCCcEEEEeccccccccccccccccccceehhhhhccccc
Confidence 11 112222 3678999999977664 4577889999999993332111 1111 11111111
Q ss_pred -cCCCEEEEEEc-C---CeEEEEEC-CCCeEEEEec---CCCCCeEEEEEcC-CCCEEEEEeCCeEEEEECCCCCCcceE
Q 002591 758 -PHLGRYLAAAA-E---NVVSILDA-ETQACRLSLQ---GHTKPIDSVCWDP-SGELLASVSEDSVRVWTVGSGSEGECV 827 (903)
Q Consensus 758 -p~~~~ll~~s~-d---g~I~i~D~-~t~~~~~~l~---~h~~~V~sl~~sp-dg~~lasgs~d~I~iwdl~s~~~~~~i 827 (903)
.....+++.+. + -..+++.+ .+...+..+. .+........|+. +|. |+.-..++|.+|++........+
T Consensus 189 ~~~~~~ll~v~~~~~~k~~ykL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~~G~-LY~l~~~~i~~ysip~f~~~~tI 267 (670)
T PF10395_consen 189 ENGKDLLLTVSQLSNSKLSYKLISLSNESSSIFELSSTILENFGLEDSKFCYQFGK-LYQLSKKTISSYSIPNFQIQKTI 267 (670)
T ss_pred ccCCceEEEEEEcCCCcEEEEEEEeccCCcceEEeehheeccCCcccceEEEeCCE-EEEEeCCEEEEEEcCCceEEEEE
Confidence 11234444443 2 25667777 1222222332 1222233333443 454 33335559999999776333333
Q ss_pred EEe--ecCC-CceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE
Q 002591 828 HEL--SCNG-NKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 828 ~~~--~~~~-~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
... -... ..+.++.- |..++++. +.++.|++.|+.-..++
T Consensus 268 ~l~~ii~~~~~~~vSl~~-~s~nRvLL-s~~nkIyLld~~~~siL 310 (670)
T PF10395_consen 268 SLPSIIDKESDDLVSLKP-PSPNRVLL-SVNNKIYLLDLKFESIL 310 (670)
T ss_pred EechhhccccccceEeec-CCCCeEEE-EcCCEEEEEeehhhhhh
Confidence 221 1111 12333322 22233333 45668999998655444
No 468
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.83 E-value=11 Score=42.39 Aligned_cols=115 Identities=14% Similarity=0.174 Sum_probs=74.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCc---eeEEeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcC
Q 002591 663 EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGY---SLRTFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSIN 739 (903)
Q Consensus 663 ~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~---~~~~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~ 739 (903)
...++|.+|.|++|.+.||+--.|++|.+++...+.. ...+.+..+..|..++|....+ +. ... +.-+.+|-+.
T Consensus 64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e-~A-~i~-~~G~e~y~v~ 140 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTE-IA-FIT-DQGIEFYQVL 140 (657)
T ss_pred cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCee-EE-EEe-cCCeEEEEEc
Confidence 4566999999999999999999999999998843211 1222233455689999986633 33 333 3345566543
Q ss_pred CC----eeeEEeecCceeEEEecCCCEEEEEEc--CCeEEEEECCCC
Q 002591 740 NG----SCTRVFKGGTAQMRFQPHLGRYLAAAA--ENVVSILDAETQ 780 (903)
Q Consensus 740 t~----~~~~~~~~~~~~v~~sp~~~~ll~~s~--dg~I~i~D~~t~ 780 (903)
.. +.+++.+.++....|.++...++.++. .+++.-+-++++
T Consensus 141 pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~ 187 (657)
T KOG2377|consen 141 PEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAG 187 (657)
T ss_pred hhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeec
Confidence 32 345566677888888888877666554 344444444443
No 469
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=91.69 E-value=20 Score=42.44 Aligned_cols=224 Identities=15% Similarity=0.164 Sum_probs=107.0
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCCc-eeEEeccC-CCceEEEEecCCCCeEEEEEeC--CCcEEEEEcCCCeeeEEee-
Q 002591 674 SPSMPRLATSSFDKTVRVWDADNPGY-SLRTFMGH-SASVMSLDFHPNKDDLICSCDG--DGEIRYWSINNGSCTRVFK- 748 (903)
Q Consensus 674 spdg~~Lasgs~Dg~I~IWDl~~~~~-~~~~~~~h-~~~V~sl~fsp~~~~ll~sgs~--Dg~I~iwDi~t~~~~~~~~- 748 (903)
..++..++.+..+|.+....+...+. ......+. .....++++..++..+++.|+. |+.+..|....-+++..+.
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~~~~N 298 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLDSLPN 298 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEEEE--
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEEeccC
Confidence 45677899999999999888875332 12222223 5566778887766345556665 5555556644444555554
Q ss_pred -cCceeEEEecC----CC------EEEEEEc---CCeEEEEECCCCeE--EEEecCC--CCCeEEEEEcC-CCCEEEEEe
Q 002591 749 -GGTAQMRFQPH----LG------RYLAAAA---ENVVSILDAETQAC--RLSLQGH--TKPIDSVCWDP-SGELLASVS 809 (903)
Q Consensus 749 -~~~~~v~~sp~----~~------~ll~~s~---dg~I~i~D~~t~~~--~~~l~~h--~~~V~sl~~sp-dg~~lasgs 809 (903)
+++..+++... .. .+++++. +|.++++.---+-. ....... ...++.+.... ++.+|+.+.
T Consensus 299 ~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~~lv~S~ 378 (504)
T PF10433_consen 299 WGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHSYLVLSF 378 (504)
T ss_dssp --SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBSEEEEEE
T ss_pred cCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCceEEEEEc
Confidence 46666666432 12 6677654 57888773221111 1111111 22344444322 255888877
Q ss_pred CCeEEEEECCCCCCcceEEEe-----ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEE-E-ccCCCCEEEEE
Q 002591 810 EDSVRVWTVGSGSEGECVHEL-----SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMT-L-TAHEGLIAALA 882 (903)
Q Consensus 810 ~d~I~iwdl~s~~~~~~i~~~-----~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~-~-~~h~~~V~sl~ 882 (903)
.+.-+++.+........+..+ ......+.+..+. +..++=.+. ..|++.+...++... + ......|.+.+
T Consensus 379 ~~~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~-~~i~l~~~~~~~~~~~w~~~~~~~I~~a~ 455 (504)
T PF10433_consen 379 PNETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTP-KGIRLIDLEDGKLTQEWKPPAGSIIVAAS 455 (504)
T ss_dssp SSEEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEES-SEEEEEESSSTSEEEEEE-TTS---SEEE
T ss_pred CCceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEec-CeEEEEECCCCeEEEEEeCCCCCeEEEEE
Confidence 775566666421111222111 1111122222222 333443333 358888887777662 2 23444555555
Q ss_pred EecCCCEEEEEecCCcEEEc
Q 002591 883 VSTETGYVASASHDKFVKLW 902 (903)
Q Consensus 883 ~spdg~~LaSgs~DG~I~IW 902 (903)
+ ++.+++.+-.++.+.++
T Consensus 456 ~--~~~~v~v~~~~~~~~~~ 473 (504)
T PF10433_consen 456 I--NDPQVLVALSGGELVYF 473 (504)
T ss_dssp E--SSSEEEEEE-TTEEEEE
T ss_pred E--CCCEEEEEEeCCcEEEE
Confidence 4 33456666566666554
No 470
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=91.44 E-value=8.8 Score=44.34 Aligned_cols=64 Identities=17% Similarity=0.179 Sum_probs=27.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-------CCceeEEe-ccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeC
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTD-------TLKSKTNL-EEHSSLITDVRFSPSMPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~-------t~~~~~~l-~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl 694 (903)
.....+..|...|..+++. |..+.||+.. ++.....+ .++...+.+| +++....|.|++|+-
T Consensus 26 ~~~~~~gi~~e~g~Aw~~~--d~~l~vW~Y~~~~~s~~~~~~~~~~~~~~~~~i~~v--------~lv~p~~G~v~f~~~ 95 (422)
T PF08801_consen 26 QSPCSMGIFPEIGRAWIVV--DNRLYVWNYSSTQSSPNDGSDFPLFDDGSSSSIPGV--------GLVKPKTGRVVFWES 95 (422)
T ss_dssp TTS-EEEEE-TTSEEEEEE--TTEEEEEE--SS--GG--EEEEE-----------SE--------EEEE-TT-EEEEES-
T ss_pred ccceEEEEEcccCEEEEEE--CCEEEEEeccCCCCCcCcccccceecCCCCCCCceE--------EEEEcCCCCEEeccc
Confidence 3445555665566444443 6789999984 23323333 3333333332 455566888999975
Q ss_pred CC
Q 002591 695 DN 696 (903)
Q Consensus 695 ~~ 696 (903)
-.
T Consensus 96 I~ 97 (422)
T PF08801_consen 96 IS 97 (422)
T ss_dssp TT
T ss_pred ch
Confidence 43
No 471
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=91.30 E-value=13 Score=41.26 Aligned_cols=107 Identities=8% Similarity=0.013 Sum_probs=51.7
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCce---eEEec---cCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEeCCCC
Q 002591 634 DGKLLATGGHD-----KKAVLWHTDTLKS---KTNLE---EHSSLITDVRFSPSMPRLATSSF-----DKTVRVWDADNP 697 (903)
Q Consensus 634 dg~~Latgs~D-----g~V~vWd~~t~~~---~~~l~---~h~~~V~~l~fspdg~~Lasgs~-----Dg~I~IWDl~~~ 697 (903)
++.+++.|+.+ ..|..||+.+.+- ...+. .......++. -++++.+.|+. ...+.+||+.+.
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~--~~~~iYv~GG~~~~~~~~~v~~yd~~~~ 149 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY--KDGTLYVGGGNRNGKPSNKSYLFNLETQ 149 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE--ECCEEEEEeCcCCCccCceEEEEcCCCC
Confidence 45677777754 3566777765442 12221 1111111222 24566666664 235888888764
Q ss_pred CceeE-EeccCCCceEEEEecCCCCeEEEEEeCCC----cEEEEEcCCCeee
Q 002591 698 GYSLR-TFMGHSASVMSLDFHPNKDDLICSCDGDG----EIRYWSINNGSCT 744 (903)
Q Consensus 698 ~~~~~-~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg----~I~iwDi~t~~~~ 744 (903)
..... .+......-.+++.. ++.+++.|+.++ .+.+||+++.+..
T Consensus 150 ~W~~~~~~p~~~r~~~~~~~~--~~~iYv~GG~~~~~~~~~~~yd~~~~~W~ 199 (323)
T TIGR03548 150 EWFELPDFPGEPRVQPVCVKL--QNELYVFGGGSNIAYTDGYKYSPKKNQWQ 199 (323)
T ss_pred CeeECCCCCCCCCCcceEEEE--CCEEEEEcCCCCccccceEEEecCCCeeE
Confidence 33221 121111111112222 345666777654 3568898877643
No 472
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=91.11 E-value=2.3 Score=48.19 Aligned_cols=128 Identities=14% Similarity=0.101 Sum_probs=84.2
Q ss_pred EEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCC--------CEEEEEeCCeEEEEECCCCCCcceEEEeec--CCC
Q 002591 766 AAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSG--------ELLASVSEDSVRVWTVGSGSEGECVHELSC--NGN 835 (903)
Q Consensus 766 ~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg--------~~lasgs~d~I~iwdl~s~~~~~~i~~~~~--~~~ 835 (903)
+.....++-.|++.|+.+.++..|... -+.|.|+. ..|+..+...|.-.|.+-....-.+...+. ..+
T Consensus 486 g~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~tKn 563 (776)
T COG5167 486 GGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKTKN 563 (776)
T ss_pred CCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhccccc
Confidence 334567888899999999998877766 45677743 345555555666666654322112222211 122
Q ss_pred ceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEE-EEccCCCCEEEEEEecCCCEEEEEecC
Q 002591 836 KFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTM-TLTAHEGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 836 ~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~~~V~sl~~spdg~~LaSgs~D 896 (903)
.+.+.. .....+|++++..|.|++||--..+.. .+.+....|..+..+.+|++|++.|..
T Consensus 564 ~Fss~~-tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~ 624 (776)
T COG5167 564 KFSSGM-TTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN 624 (776)
T ss_pred cccccc-cccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc
Confidence 233333 234568999999999999996554443 677788899999999999988777654
No 473
>KOG4659 consensus Uncharacterized conserved protein (Rhs family) [Function unknown]
Probab=91.05 E-value=51 Score=42.17 Aligned_cols=81 Identities=16% Similarity=0.130 Sum_probs=42.6
Q ss_pred eeeeeEeecCCCCeEEEEEcC--CCC-EE----EEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEEC---CCCC-EEE
Q 002591 613 FKEANSVRASTSKVICCHFSS--DGK-LL----ATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFS---PSMP-RLA 681 (903)
Q Consensus 613 ~~~~~~l~~H~~~V~~l~fsp--dg~-~L----atgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fs---pdg~-~La 681 (903)
.....-..+|...|.|..+.- ++. +| ++.+-||.+.|=|.. .++.+.......+-+... +..+ +||
T Consensus 337 vitt~mgdG~qR~veC~~C~G~a~~~~L~aPvala~a~DGSl~VGDfN---yIRRI~~dg~v~tIl~L~~t~~sh~Yy~A 413 (1899)
T KOG4659|consen 337 VITTAMGDGHQRDVECPKCEGKADSISLFAPVALAYAPDGSLIVGDFN---YIRRISQDGQVSTILTLGLTDTSHSYYIA 413 (1899)
T ss_pred eEEEeccCcccccccCCCCCCccccceeeceeeEEEcCCCcEEEccch---heeeecCCCceEEEEEecCCCccceeEEE
Confidence 333444568888888877653 222 22 234578888887753 233332222222222222 2222 456
Q ss_pred EEeCCCcEEEEeCCC
Q 002591 682 TSSFDKTVRVWDADN 696 (903)
Q Consensus 682 sgs~Dg~I~IWDl~~ 696 (903)
..-.||++.|-|..+
T Consensus 414 vsPvdgtlyvSdp~s 428 (1899)
T KOG4659|consen 414 VSPVDGTLYVSDPLS 428 (1899)
T ss_pred ecCcCceEEecCCCc
Confidence 656688887777664
No 474
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=91.05 E-value=6.7 Score=37.13 Aligned_cols=115 Identities=11% Similarity=0.113 Sum_probs=71.5
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCC-------ceeEEeccCCCceEEEEecC----CCCeEEEEEeCCCcEEEEE
Q 002591 669 TDVRFSPSMPRLATSSFDKTVRVWDADNPG-------YSLRTFMGHSASVMSLDFHP----NKDDLICSCDGDGEIRYWS 737 (903)
Q Consensus 669 ~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~-------~~~~~~~~h~~~V~sl~fsp----~~~~ll~sgs~Dg~I~iwD 737 (903)
..-+|......|++++.-|+|.|++..... ..++.+. -...|++|+-.+ ++..+|+.|+ ...|..||
T Consensus 2 aiGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt-~t~llaYD 79 (136)
T PF14781_consen 2 AIGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYD 79 (136)
T ss_pred eEEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEec-cceEEEEE
Confidence 345666667789999999999999876421 1233333 456677776443 2344665666 67899999
Q ss_pred cCCCeee--EEeecCceeEEEecC---CCEEEEEEcCCeEEEEECCCCeEEEE
Q 002591 738 INNGSCT--RVFKGGTAQMRFQPH---LGRYLAAAAENVVSILDAETQACRLS 785 (903)
Q Consensus 738 i~t~~~~--~~~~~~~~~v~~sp~---~~~ll~~s~dg~I~i~D~~t~~~~~~ 785 (903)
+....-+ +.+..++.++.+-.- ...++..+.+..|.-||.+-.+...+
T Consensus 80 V~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt 132 (136)
T PF14781_consen 80 VENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT 132 (136)
T ss_pred cccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence 9876533 445566766665322 24456666666666666655444443
No 475
>PHA02790 Kelch-like protein; Provisional
Probab=90.84 E-value=7.9 Score=45.59 Aligned_cols=167 Identities=8% Similarity=-0.110 Sum_probs=79.6
Q ss_pred CeEEEEEeCCC-----cEEEEEcCCCeeeEEee--cCc-eeEEEecCCCEEEEEEcC--CeEEEEECCCCeEEE--EecC
Q 002591 721 DDLICSCDGDG-----EIRYWSINNGSCTRVFK--GGT-AQMRFQPHLGRYLAAAAE--NVVSILDAETQACRL--SLQG 788 (903)
Q Consensus 721 ~~ll~sgs~Dg-----~I~iwDi~t~~~~~~~~--~~~-~~v~~sp~~~~ll~~s~d--g~I~i~D~~t~~~~~--~l~~ 788 (903)
+.++++|+.++ .+..||..+.+....-. ... .......++..+++|+.+ ..+..||..+.+-.. .+..
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~ 351 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLK 351 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCCCC
Confidence 45666676542 57778888776443221 111 111223344555556543 468888877654322 1111
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEEECC
Q 002591 789 HTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMS 864 (903)
Q Consensus 789 h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~ 864 (903)
..... +++ .-+|++.+.|+.+ .+..||.++.. ...+..+....... + +..-+++..++| |.+.+||..
T Consensus 352 ~r~~~-~~~-~~~g~IYviGG~~~~~~~ve~ydp~~~~-W~~~~~m~~~r~~~-~-~~~~~~~IYv~G---G~~e~ydp~ 423 (480)
T PHA02790 352 PRCNP-AVA-SINNVIYVIGGHSETDTTTEYLLPNHDQ-WQFGPSTYYPHYKS-C-ALVFGRRLFLVG---RNAEFYCES 423 (480)
T ss_pred CCccc-EEE-EECCEEEEecCcCCCCccEEEEeCCCCE-EEeCCCCCCccccc-e-EEEECCEEEEEC---CceEEecCC
Confidence 11111 222 2257766666643 47788876541 11111111111111 1 222344444444 357889998
Q ss_pred CCcEEEEccC--CCCEEEEEEecCCCEEEEEecC
Q 002591 865 ENKTMTLTAH--EGLIAALAVSTETGYVASASHD 896 (903)
Q Consensus 865 ~~~~~~~~~h--~~~V~sl~~spdg~~LaSgs~D 896 (903)
+++...+..- ...-.+++ .-++++.+.|+.+
T Consensus 424 ~~~W~~~~~m~~~r~~~~~~-v~~~~IYviGG~~ 456 (480)
T PHA02790 424 SNTWTLIDDPIYPRDNPELI-IVDNKLLLIGGFY 456 (480)
T ss_pred CCcEeEcCCCCCCccccEEE-EECCEEEEECCcC
Confidence 8776543321 11111222 2467788888764
No 476
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.70 E-value=1.9 Score=54.30 Aligned_cols=160 Identities=16% Similarity=0.263 Sum_probs=87.2
Q ss_pred CCCcEEEEECCCCceeEEeccCCCCeEEEEE--------CCCCCEEEEEeCCCcEEEEeCCCCCc--ee------EEecc
Q 002591 643 HDKKAVLWHTDTLKSKTNLEEHSSLITDVRF--------SPSMPRLATSSFDKTVRVWDADNPGY--SL------RTFMG 706 (903)
Q Consensus 643 ~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~f--------spdg~~Lasgs~Dg~I~IWDl~~~~~--~~------~~~~~ 706 (903)
.|+.+.+|+.+++.....+.+-...|..|.. .|.=++|++-..--.|.|+-+.-... .. ..+..
T Consensus 97 iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~ 176 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKISV 176 (1311)
T ss_pred eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeeec
Confidence 5889999999998888888888888888765 23334555555555577764432111 11 11222
Q ss_pred CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEe
Q 002591 707 HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSL 786 (903)
Q Consensus 707 h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l 786 (903)
....|.||....+|+ +|+ ++.|| .+|.+--...-..|......++.+.. .-..+. .. +..+
T Consensus 177 dg~~V~~I~~t~nGR-IF~-~G~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s--------~ls~lv------Ps-~~~~ 237 (1311)
T KOG1900|consen 177 DGVSVNCITYTENGR-IFF-AGRDG--NLYELVYQAEDGWFGSRCRKICLTKS--------VLSSLV------PS-LLSV 237 (1311)
T ss_pred CCceEEEEEeccCCc-EEE-eecCC--CEEEEEEeccCchhhcccccccCchh--------HHHHhh------hh-hhcC
Confidence 345688888666654 553 44566 44543211000000000111111000 000000 00 1112
Q ss_pred -cCCCCCeEEEEEcCCCCEEEEEeCC-eEEEEECCCC
Q 002591 787 -QGHTKPIDSVCWDPSGELLASVSED-SVRVWTVGSG 821 (903)
Q Consensus 787 -~~h~~~V~sl~~spdg~~lasgs~d-~I~iwdl~s~ 821 (903)
..+.++|..+.++....++.+-+.. +|.+||+...
T Consensus 238 ~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~~ 274 (1311)
T KOG1900|consen 238 PGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGGN 274 (1311)
T ss_pred CCCCCCcceeeEeccccceeeeeccCceEEEEEccCC
Confidence 2467789999998888888888877 8999999763
No 477
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.65 E-value=5.3 Score=50.99 Aligned_cols=227 Identities=11% Similarity=0.046 Sum_probs=105.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCC-CCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 624 SKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHS-SLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 624 ~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~-~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
.....++|++.-.++|.+..+|.|++|-..--+.......-. ..+..+.|-.....+.....+..+.+|.....+.
T Consensus 36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~--- 112 (993)
T KOG1983|consen 36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTG--- 112 (993)
T ss_pred CCCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeecccccce---
Confidence 356678899999999999999999999754322222111111 0122222222222333334455566665543111
Q ss_pred EeccCCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEE----eecCce-eEEEecCCCEEEEEEcCCeEEEEEC
Q 002591 703 TFMGHSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRV----FKGGTA-QMRFQPHLGRYLAAAAENVVSILDA 777 (903)
Q Consensus 703 ~~~~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~----~~~~~~-~v~~sp~~~~ll~~s~dg~I~i~D~ 777 (903)
.+ +...+++..-.+- -..+-+ ..+.+++||+.-...... +..... ...+.+..-.+..--.+-.-.++-+
T Consensus 113 ~~--~~~~~~~~~~~~~--~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 187 (993)
T KOG1983|consen 113 VF--LKQEITSFVTDPP--PDWLIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLDTVLISL 187 (993)
T ss_pred ee--cCCcceeccCCCC--cchhcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeeccccccccceeec
Confidence 11 1222333322221 112344 788888888764321111 011100 0011110000000000000001111
Q ss_pred CCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEeCCCCEEEEEECCCe
Q 002591 778 ETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQS 857 (903)
Q Consensus 778 ~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~ 857 (903)
.... ..+..+..++.+..+......+..+....+.+|+...... .+.+. +....+..++..++++..||.
T Consensus 188 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~v~~h~Dgs 257 (993)
T KOG1983|consen 188 PDAY--LGLSLIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYV---QSAYL-----PNGQLESRDGSHFVSYHTDGS 257 (993)
T ss_pred cccc--ccccccccccceeeeecCCCcceeeeeeeeeehhcccccc---hhhcc-----cccccCccCCceEEEEEecCC
Confidence 0000 1222345556666665555655555555666666543311 11111 111122778999999999999
Q ss_pred EEEEECCCCcE
Q 002591 858 LELWNMSENKT 868 (903)
Q Consensus 858 I~vwdl~~~~~ 868 (903)
+.+||...++.
T Consensus 258 ~~fWd~s~g~~ 268 (993)
T KOG1983|consen 258 YAFWDVSSGKL 268 (993)
T ss_pred EEeeecCCCce
Confidence 99999998754
No 478
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=90.65 E-value=5.9 Score=47.96 Aligned_cols=74 Identities=9% Similarity=0.021 Sum_probs=48.2
Q ss_pred CCCeEEEEEc--CCCCEEEEEeCC-eEEEEECCCCCCcceEEEeecCCCceEEEEEeCCC---C---EEEEEECCCeEEE
Q 002591 790 TKPIDSVCWD--PSGELLASVSED-SVRVWTVGSGSEGECVHELSCNGNKFHSCVFHPTY---P---SLLVIGCYQSLEL 860 (903)
Q Consensus 790 ~~~V~sl~~s--pdg~~lasgs~d-~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~sp~g---~---~l~t~s~dg~I~v 860 (903)
...+++++++ ...++||+++.. .|.||-+...........-..+...|.+++|-++. . ++++++-.|.+.+
T Consensus 163 ~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~ 242 (717)
T PF08728_consen 163 GASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWT 242 (717)
T ss_pred CCceeEEEEEecCcceEEEEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEE
Confidence 3467889988 667788888777 77776654421111111112256678888887644 2 6777888898888
Q ss_pred EEC
Q 002591 861 WNM 863 (903)
Q Consensus 861 wdl 863 (903)
|++
T Consensus 243 ~~I 245 (717)
T PF08728_consen 243 FKI 245 (717)
T ss_pred EEE
Confidence 777
No 479
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=90.62 E-value=4.5 Score=42.76 Aligned_cols=129 Identities=16% Similarity=0.190 Sum_probs=75.0
Q ss_pred EEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC----eEEEEECCCCCCcceEEEe---ecCCCceEEEEEeC
Q 002591 772 VSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED----SVRVWTVGSGSEGECVHEL---SCNGNKFHSCVFHP 844 (903)
Q Consensus 772 I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d----~I~iwdl~s~~~~~~i~~~---~~~~~~i~si~~sp 844 (903)
-.+||+.+.+...........+.+-.+.+||++|.+|+.. .+++|+...........+. -.......+...-+
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 4678988876543322233334445688999999998763 6888886541110111110 11233445566678
Q ss_pred CCCEEEEEECCC-eEEEEECCC--CcEEEE--cc------CCCCEEEEEEecCCCEEEEEecCCcEE
Q 002591 845 TYPSLLVIGCYQ-SLELWNMSE--NKTMTL--TA------HEGLIAALAVSTETGYVASASHDKFVK 900 (903)
Q Consensus 845 ~g~~l~t~s~dg-~I~vwdl~~--~~~~~~--~~------h~~~V~sl~~spdg~~LaSgs~DG~I~ 900 (903)
||+.|++|+... +..+|.-.. .....+ .. ....---+...|+|++|+.+..+..|.
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s~i~ 194 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGSIIY 194 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCcEEE
Confidence 999999999885 566666532 122211 11 111222455579999999998776654
No 480
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.61 E-value=2.4 Score=48.26 Aligned_cols=95 Identities=9% Similarity=0.197 Sum_probs=48.4
Q ss_pred ceeEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEe
Q 002591 751 TAQMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHEL 830 (903)
Q Consensus 751 ~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~ 830 (903)
+..+..++.|..++.++.+|.+.++=.+..-.-..++.....|+|=.|.-+..++ +.+.
T Consensus 106 V~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~f-tss~-------------------- 164 (741)
T KOG4460|consen 106 VYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFF-TSST-------------------- 164 (741)
T ss_pred EEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceee-ccCC--------------------
Confidence 3446677788888888887766554322222222222222233333332211111 1110
Q ss_pred ecCCCceEEEEEeCCC---CEEEEEECCCeEEEEECCCCcEE
Q 002591 831 SCNGNKFHSCVFHPTY---PSLLVIGCYQSLELWNMSENKTM 869 (903)
Q Consensus 831 ~~~~~~i~si~~sp~g---~~l~t~s~dg~I~vwdl~~~~~~ 869 (903)
.-.+..++|||+. .+|++-..|..|++||+.+.+.+
T Consensus 165 ---~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 165 ---SLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred ---ceeeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 1123445677754 56777777788888887765544
No 481
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=90.52 E-value=11 Score=46.74 Aligned_cols=59 Identities=12% Similarity=0.117 Sum_probs=34.4
Q ss_pred CCcEEEEeCCCCCceeEEecc--CCCceEEEEecCCCCeEEEEEeCCCcEEEEEcCCCeeeEEee
Q 002591 686 DKTVRVWDADNPGYSLRTFMG--HSASVMSLDFHPNKDDLICSCDGDGEIRYWSINNGSCTRVFK 748 (903)
Q Consensus 686 Dg~I~IWDl~~~~~~~~~~~~--h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~~~~~~~~ 748 (903)
+|.++.|++-..+..+..+.. -.+.| .+.+|..+++++ +....+++||+...+.++..+
T Consensus 911 ~g~~ytyk~~~~g~~lellh~T~~~~~v--~Ai~~f~~~~La--gvG~~l~~YdlG~K~lLRk~e 971 (1205)
T KOG1898|consen 911 SGFVYTYKFVRNGDKLELLHKTEIPGPV--GAICPFQGRVLA--GVGRFLRLYDLGKKKLLRKCE 971 (1205)
T ss_pred CCceEEEEEEecCceeeeeeccCCCccc--eEEeccCCEEEE--ecccEEEEeeCChHHHHhhhh
Confidence 455777777655554444332 22333 445566665553 335789999988777665543
No 482
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=89.97 E-value=8.4 Score=36.50 Aligned_cols=76 Identities=16% Similarity=0.266 Sum_probs=47.2
Q ss_pred CCCeEEEE---EcC--CCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEe---CCCCEEEEEECCCeEEEE
Q 002591 790 TKPIDSVC---WDP--SGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFH---PTYPSLLVIGCYQSLELW 861 (903)
Q Consensus 790 ~~~V~sl~---~sp--dg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s---p~g~~l~t~s~dg~I~vw 861 (903)
...|++|+ |.| +...|+.|+...|..||+..... ...+++ ...+.++.+- ....-++..+.+..|.-|
T Consensus 47 n~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d-~Fyke~---~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gf 122 (136)
T PF14781_consen 47 NQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSD-LFYKEV---PDGVNAIVIGKLGDIPSPLVIVGGNCSIQGF 122 (136)
T ss_pred CCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCch-hhhhhC---ccceeEEEEEecCCCCCcEEEECceEEEEEe
Confidence 45566664 432 34588999998999999976532 111222 3445555542 223446777777788888
Q ss_pred ECCCCcEE
Q 002591 862 NMSENKTM 869 (903)
Q Consensus 862 dl~~~~~~ 869 (903)
|....+..
T Consensus 123 d~~G~e~f 130 (136)
T PF14781_consen 123 DYEGNEIF 130 (136)
T ss_pred CCCCcEEE
Confidence 88776655
No 483
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=89.59 E-value=3.3 Score=47.31 Aligned_cols=52 Identities=19% Similarity=0.177 Sum_probs=42.4
Q ss_pred eEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCc
Q 002591 658 KTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSAS 710 (903)
Q Consensus 658 ~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~ 710 (903)
...+......+.+|+.+|++++.|+...=|.|.|+|+.+ +..++.++|..+.
T Consensus 300 r~~l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~-~~vvrmWKGYRdA 351 (415)
T PF14655_consen 300 RFGLPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVAR-GIVVRMWKGYRDA 351 (415)
T ss_pred EEeeccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCC-ChhhhhhccCccc
Confidence 344555666789999999999988888889999999998 7788888887654
No 484
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=89.47 E-value=48 Score=38.54 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=40.6
Q ss_pred eecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCce--eEEec-----cCCCCeEEEEECCCC
Q 002591 619 VRASTSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKS--KTNLE-----EHSSLITDVRFSPSM 677 (903)
Q Consensus 619 l~~H~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~--~~~l~-----~h~~~V~~l~fspdg 677 (903)
+...-..-+.|+|.|||++|++--..|.|++++..++.. +..+. ........|+|+|+-
T Consensus 25 va~GL~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 25 LLSGLNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred EECCCCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 344566789999999998777765469999998654432 22121 135678999999874
No 485
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=89.35 E-value=60 Score=39.58 Aligned_cols=62 Identities=21% Similarity=0.285 Sum_probs=41.4
Q ss_pred EeccCCCCeEEEEECCCCCEEEEEeCCCc--EEEEeCCCCCceeEEeccCCCceEEEEecCCCCeEEE
Q 002591 660 NLEEHSSLITDVRFSPSMPRLATSSFDKT--VRVWDADNPGYSLRTFMGHSASVMSLDFHPNKDDLIC 725 (903)
Q Consensus 660 ~l~~h~~~V~~l~fspdg~~Lasgs~Dg~--I~IWDl~~~~~~~~~~~~h~~~V~sl~fsp~~~~ll~ 725 (903)
....+...+.++.|+|++..++..+.++. ..+|-+...+ .+..+...|....|++.+..+++
T Consensus 54 ~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g----~~~~~~~~v~~~~~~~~g~~~~~ 117 (620)
T COG1506 54 RLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG----LITKTAFGVSDARWSPDGDRIAF 117 (620)
T ss_pred cccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecCC----ceeeeecccccceeCCCCCeEEE
Confidence 34457778899999999999988874332 4455444322 33345556777888888776654
No 486
>KOG2109 consensus WD40 repeat protein [General function prediction only]
Probab=89.25 E-value=0.88 Score=53.05 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=53.9
Q ss_pred ceeeeeEeecCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCce-----eEEeccC-----CCCeEEEEECCCCCEE
Q 002591 612 SFKEANSVRASTSKVICCHFSSDGKLLATGGHDK-KAVLWHTDTLKS-----KTNLEEH-----SSLITDVRFSPSMPRL 680 (903)
Q Consensus 612 ~~~~~~~l~~H~~~V~~l~fspdg~~Latgs~Dg-~V~vWd~~t~~~-----~~~l~~h-----~~~V~~l~fspdg~~L 680 (903)
++..+..|+.|..+|..++|.+.|.+|++++..| .|.++.+....+ ...+..| ...|-.|+|+....++
T Consensus 304 S~a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfRimet~~t~~~~~qs~~~s~ra~t~aviqdicfs~~s~~r 383 (788)
T KOG2109|consen 304 SFADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFRIMETVCTVNVSDQSLVVSPRANTAAVIQDICFSEVSTIR 383 (788)
T ss_pred chhhhhheeeecCcccccccccCceEEEEEeeccceeeeEEeccccccccccccccccchhcchHHHHHHHhhhhhcceE
Confidence 6777888999999999999999999999988765 355555431111 1111111 2346678888888888
Q ss_pred EEEeCCCc
Q 002591 681 ATSSFDKT 688 (903)
Q Consensus 681 asgs~Dg~ 688 (903)
+.++.+|+
T Consensus 384 ~~gsc~Ge 391 (788)
T KOG2109|consen 384 TAGSCEGE 391 (788)
T ss_pred eecccCCC
Confidence 88887764
No 487
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=88.94 E-value=2.2 Score=44.45 Aligned_cols=61 Identities=16% Similarity=0.198 Sum_probs=47.9
Q ss_pred EeCCCCEEEEEECCCeEEEEECCCCcEEE--------Ec-------cCCCCEEEEEEecCCCEEEEEecCCcEEEcC
Q 002591 842 FHPTYPSLLVIGCYQSLELWNMSENKTMT--------LT-------AHEGLIAALAVSTETGYVASASHDKFVKLWK 903 (903)
Q Consensus 842 ~sp~g~~l~t~s~dg~I~vwdl~~~~~~~--------~~-------~h~~~V~sl~~spdg~~LaSgs~DG~I~IWd 903 (903)
+..++.++++.+.+|.+++||+.+++.+. +. .....|..+.++.+|.-|++-+ +|..+.|+
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~ 93 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYS 93 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEec
Confidence 45578899999999999999999988761 11 3556789999998888777765 57788875
No 488
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=88.87 E-value=0.06 Score=60.27 Aligned_cols=140 Identities=19% Similarity=0.285 Sum_probs=93.1
Q ss_pred eEEEecCCCEEEEEEcCCeEEEEECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeC--CeEEEEECCCCCCcceEEEe
Q 002591 753 QMRFQPHLGRYLAAAAENVVSILDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSE--DSVRVWTVGSGSEGECVHEL 830 (903)
Q Consensus 753 ~v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~--d~I~iwdl~s~~~~~~i~~~ 830 (903)
...|.+.+..+++++.+..|..||-...... ... .++....++|+-++..++.... +.+++||+.+..... +..
T Consensus 39 ~~~w~~e~~nlavaca~tiv~~YD~agq~~l-e~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq-LE~- 114 (615)
T KOG2247|consen 39 IHRWRPEGHNLAVACANTIVIYYDKAGQVIL-ELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ-LES- 114 (615)
T ss_pred eeeEecCCCceehhhhhhHHHhhhhhcceec-ccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH-Hhc-
Confidence 3456677777777777777877875433222 111 3455567889988885554443 389999998642111 111
Q ss_pred ecCCCceEEEEEeCCCCEEEEEECCCeEEEEECCCCcEEEEcc-CCCCEEEEEEecCCCEEEEEecCCc
Q 002591 831 SCNGNKFHSCVFHPTYPSLLVIGCYQSLELWNMSENKTMTLTA-HEGLIAALAVSTETGYVASASHDKF 898 (903)
Q Consensus 831 ~~~~~~i~si~~sp~g~~l~t~s~dg~I~vwdl~~~~~~~~~~-h~~~V~sl~~spdg~~LaSgs~DG~ 898 (903)
.+ ...-.-+.|++.+..++.+...+.+.||+..+.+.+...+ |...+++++|.+.+. ++.++.|..
T Consensus 115 gg-~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~~ 181 (615)
T KOG2247|consen 115 GG-TSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDNT 181 (615)
T ss_pred cC-cchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHHH
Confidence 11 1111125799999999999999999999999888775555 999999999988764 555555543
No 489
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=88.80 E-value=17 Score=42.76 Aligned_cols=142 Identities=14% Similarity=0.075 Sum_probs=72.3
Q ss_pred CCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEEeccCCCc---eEEEEecCC
Q 002591 643 HDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRTFMGHSAS---VMSLDFHPN 719 (903)
Q Consensus 643 ~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~~~~h~~~---V~sl~fsp~ 719 (903)
..+.+.++|. .|..+..+.........+.+.++|.+++... ..++.+|+. ++.+..+.-.... =.++.+.|+
T Consensus 126 ~~~~~~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~--G~v~~~~~l~~~~~~~HHD~~~l~n 200 (477)
T PF05935_consen 126 SSSYTYLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL--GKVIWEYDLPGGYYDFHHDIDELPN 200 (477)
T ss_dssp BEEEEEEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT----EEEEEE--TTEE-B-S-EEE-TT
T ss_pred CCceEEEECC-CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC--CCEEEeeecCCcccccccccEECCC
Confidence 3445556664 3444444432222222266778888887665 778888886 4444443322211 234667788
Q ss_pred CCeEEEEEe-------C-----CCcEEEEEcCCCeeeEEee------------------------------cCceeEEEe
Q 002591 720 KDDLICSCD-------G-----DGEIRYWSINNGSCTRVFK------------------------------GGTAQMRFQ 757 (903)
Q Consensus 720 ~~~ll~sgs-------~-----Dg~I~iwDi~t~~~~~~~~------------------------------~~~~~v~~s 757 (903)
|+.++++.. . +-.|..+| .+|+.+..+. .|++++.+.
T Consensus 201 Gn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd 279 (477)
T PF05935_consen 201 GNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYD 279 (477)
T ss_dssp S-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEE
T ss_pred CCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEe
Confidence 776664441 0 12344555 5555544321 145678888
Q ss_pred cCCCEEEEEEcC-CeEEEEECCCCeEEEEecCCC
Q 002591 758 PHLGRYLAAAAE-NVVSILDAETQACRLSLQGHT 790 (903)
Q Consensus 758 p~~~~ll~~s~d-g~I~i~D~~t~~~~~~l~~h~ 790 (903)
+.++.|++++.. ..|..+|.++++....+..+.
T Consensus 280 ~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~~~ 313 (477)
T PF05935_consen 280 PSDDSIIVSSRHQSAVIKIDYRTGKIKWILGPPG 313 (477)
T ss_dssp TTTTEEEEEETTT-EEEEEE-TTS-EEEEES-ST
T ss_pred CCCCeEEEEcCcceEEEEEECCCCcEEEEeCCCC
Confidence 977888888875 489999999998888776553
No 490
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=88.54 E-value=39 Score=39.52 Aligned_cols=258 Identities=12% Similarity=0.048 Sum_probs=122.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEec-cCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeEE
Q 002591 625 KVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLE-EHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLRT 703 (903)
Q Consensus 625 ~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~-~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~~ 703 (903)
+|..+..+-.| .|.+|+.+| |++.+.+..+...-.. -..+.|..+.-...| .+-.|+..|..+ +.....+..+..
T Consensus 207 ~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~sn~~~~lp~~~I~ll~qD~qG-~lWiGTenGl~r-~~l~rq~Lq~~~ 282 (671)
T COG3292 207 AINALIADVQG-RLWVGTDQG-VYLQEAEGWRASNWGPMLPSGNILLLVQDAQG-ELWIGTENGLWR-TRLPRQGLQIPL 282 (671)
T ss_pred hHHHHHHHhcC-cEEEEeccc-eEEEchhhccccccCCCCcchheeeeecccCC-CEEEeeccccee-EecCCCCccccc
Confidence 44444444344 466676665 6776655422111111 122334444333333 445555555332 233332322222
Q ss_pred eccCC--CceEEEEecCCCCeEEEEEeCCCcEEEEEcCCC--eeeEEeecCcee-EEEec--CCCEEEEEEcCCeEEEEE
Q 002591 704 FMGHS--ASVMSLDFHPNKDDLICSCDGDGEIRYWSINNG--SCTRVFKGGTAQ-MRFQP--HLGRYLAAAAENVVSILD 776 (903)
Q Consensus 704 ~~~h~--~~V~sl~fsp~~~~ll~sgs~Dg~I~iwDi~t~--~~~~~~~~~~~~-v~~sp--~~~~ll~~s~dg~I~i~D 776 (903)
.+.|. +.|.++....+|. +.+++.+|.+++-+-.-. +.+...++.+.. ++..+ .+..+-...+-|.+.+-+
T Consensus 283 ~~~~l~~S~vnsL~~D~dGs--LWv~t~~giv~~~~a~w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van 360 (671)
T COG3292 283 SKMHLGVSTVNSLWLDTDGS--LWVGTYGGIVRYLTADWKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVAN 360 (671)
T ss_pred cccCCccccccceeeccCCC--EeeeccCceEEEecchhhheeeeecCCCchhhhhccCchhcccceeeccccceEEEec
Confidence 22222 3455555555544 346776776665543211 111111121111 11111 122222223334455556
Q ss_pred CCCCeEEEEecC-CCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeec-CCCceEEEEEeCCCCEEEEEEC
Q 002591 777 AETQACRLSLQG-HTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSC-NGNKFHSCVFHPTYPSLLVIGC 854 (903)
Q Consensus 777 ~~t~~~~~~l~~-h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~-~~~~i~si~~sp~g~~l~t~s~ 854 (903)
..++..+..... -...|+.+++..++.+-+....+.+..|+..+. ...+.+..+ ....|..+.-.|+++ |.+++.
T Consensus 361 ~stG~~v~sv~q~Rg~nit~~~~d~~g~lWlgs~q~GLsrl~n~n~--~avlde~agl~ss~V~aived~dns-LWIGTs 437 (671)
T COG3292 361 GSTGELVRSVHQLRGMNITTTLEDSRGRLWLGSMQNGLSRLDNKNE--WAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTS 437 (671)
T ss_pred CCCCcEEEEeeeccccccchhhhccCCcEEEEecccchhhhccCCc--ccccccccCCcccceeeeeecCCCC-EEEecc
Confidence 666665554332 335677788887666444444447778887651 122222222 245677777888887 888888
Q ss_pred CCeEEEEECCCCcEEE---Ecc---CCCCEEEEEEecCCCEEEE
Q 002591 855 YQSLELWNMSENKTMT---LTA---HEGLIAALAVSTETGYVAS 892 (903)
Q Consensus 855 dg~I~vwdl~~~~~~~---~~~---h~~~V~sl~~spdg~~LaS 892 (903)
+|.++. +.+.++... +.. ..+.|..+.+.++|++-+.
T Consensus 438 ~Glvk~-~pe~~~v~n~ln~~~~~l~~s~~~~lg~~~~g~Lw~a 480 (671)
T COG3292 438 GGLVKR-DPESGRVLNLLNPGSHGLDGSRVEQLGLGPDGRLWLA 480 (671)
T ss_pred CCeEec-CccccchhcccccccCcCCcchhhhhccCCCCceEEE
Confidence 876554 444433331 112 2345677788888885443
No 491
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=88.38 E-value=52 Score=37.63 Aligned_cols=108 Identities=13% Similarity=-0.004 Sum_probs=59.5
Q ss_pred CceeEEEecCCCEEEEEEcCCeEEEEECCCCe-----EEEEecC--CCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCC
Q 002591 750 GTAQMRFQPHLGRYLAAAAENVVSILDAETQA-----CRLSLQG--HTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGS 822 (903)
Q Consensus 750 ~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t~~-----~~~~l~~--h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~ 822 (903)
....+.+.+++..++++ ..|.+..- ...+. ....+.. ....+.++.|.+++..+++|..+.+.+. ...++
T Consensus 282 ~l~~v~~~~dg~l~l~g-~~G~l~~S-~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G~~G~v~~s-~D~G~ 358 (398)
T PLN00033 282 RIQNMGWRADGGLWLLT-RGGGLYVS-KGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAGGSGILLRS-TDGGK 358 (398)
T ss_pred ceeeeeEcCCCCEEEEe-CCceEEEe-cCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEECCCcEEEe-CCCCc
Confidence 34566777776655544 55554433 22222 1222221 2235889999998888888877744443 33333
Q ss_pred CcceEEEeecCCCceEEEEEeCCCCEEEEEECCCeEEEE
Q 002591 823 EGECVHELSCNGNKFHSCVFHPTYPSLLVIGCYQSLELW 861 (903)
Q Consensus 823 ~~~~i~~~~~~~~~i~si~~sp~g~~l~t~s~dg~I~vw 861 (903)
..........-...++.+.|.++++ .++.+.+|.|.-|
T Consensus 359 tW~~~~~~~~~~~~ly~v~f~~~~~-g~~~G~~G~il~~ 396 (398)
T PLN00033 359 SWKRDKGADNIAANLYSVKFFDDKK-GFVLGNDGVLLRY 396 (398)
T ss_pred ceeEccccCCCCcceeEEEEcCCCc-eEEEeCCcEEEEe
Confidence 2222221122244577888876654 6666777776554
No 492
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=88.22 E-value=7 Score=46.74 Aligned_cols=93 Identities=14% Similarity=0.254 Sum_probs=54.9
Q ss_pred eeEEEecCCCEEEEEEcCC-----eEEEEECC---CCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCC
Q 002591 752 AQMRFQPHLGRYLAAAAEN-----VVSILDAE---TQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSE 823 (903)
Q Consensus 752 ~~v~~sp~~~~ll~~s~dg-----~I~i~D~~---t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~ 823 (903)
..+.|-|.|..+++...|| .|.+|... .|+.-.. .+....+..++|+-....++.+..+.|.+|...+.
T Consensus 250 ~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr-~~~dEk~~~~~wn~~s~vlav~~~n~~~lwttkNy-- 326 (1243)
T COG5290 250 HQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLR-VGCDEKAFLENWNLLSTVLAVAEGNLLKLWTTKNY-- 326 (1243)
T ss_pred hccccccCCceeeeeccCCCCCcceEEEEccCCcccCCcccc-CCchhhhhhhhhhHHHHHHHHhhcceEEEEEccce--
Confidence 3478999999999887654 34444422 2222111 12334566788887777777777778999987654
Q ss_pred cceEEEeecCCCceEEEEEeCCCCE
Q 002591 824 GECVHELSCNGNKFHSCVFHPTYPS 848 (903)
Q Consensus 824 ~~~i~~~~~~~~~i~si~~sp~g~~ 848 (903)
............+.-+.|+|....
T Consensus 327 -hWYLK~e~~ip~~s~vkwhpe~~n 350 (1243)
T COG5290 327 -HWYLKVERQIPGISYVKWHPEEKN 350 (1243)
T ss_pred -EEEEEEeecCCCcceeeeccccCc
Confidence 211122222344566788886544
No 493
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=87.91 E-value=44 Score=36.25 Aligned_cols=214 Identities=11% Similarity=0.123 Sum_probs=115.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEeCCC------CCceeEEecc-----CCCceEEEEecCCCC-----------eEE
Q 002591 667 LITDVRFSPSMPRLATSSFDKTVRVWDADN------PGYSLRTFMG-----HSASVMSLDFHPNKD-----------DLI 724 (903)
Q Consensus 667 ~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~------~~~~~~~~~~-----h~~~V~sl~fsp~~~-----------~ll 724 (903)
.-+.|+|+|.+.+.++....+...+||... ....+.++.. .....+.+.|+.... -.+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 357899999998888888899999999971 1222333331 234567777764322 224
Q ss_pred EEEeCCCcEEEEEcCCCee-----eEEeec----Cc-eeEEEe--cCCCEEEEEEc-CCeEEEEECCCCeEEEEecCCCC
Q 002591 725 CSCDGDGEIRYWSINNGSC-----TRVFKG----GT-AQMRFQ--PHLGRYLAAAA-ENVVSILDAETQACRLSLQGHTK 791 (903)
Q Consensus 725 ~sgs~Dg~I~iwDi~t~~~-----~~~~~~----~~-~~v~~s--p~~~~ll~~s~-dg~I~i~D~~t~~~~~~l~~h~~ 791 (903)
+.+++||+|.-|...-... ...+.. .+ ..+++. ..+.+|+++.. .++|.+||..-.+.... ....+
T Consensus 104 if~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~-g~F~D 182 (336)
T TIGR03118 104 LFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLP-GSFID 182 (336)
T ss_pred EEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCC-CCccC
Confidence 5788999999998533222 112221 11 123333 23455555543 68899998653322110 00111
Q ss_pred CeEEEEEcC------CCCEEEEE--------------eCCeEEEEECCCCCCcceEEEeec--CCCceEEEEEeC-----
Q 002591 792 PIDSVCWDP------SGELLASV--------------SEDSVRVWTVGSGSEGECVHELSC--NGNKFHSCVFHP----- 844 (903)
Q Consensus 792 ~V~sl~~sp------dg~~lasg--------------s~d~I~iwdl~s~~~~~~i~~~~~--~~~~i~si~~sp----- 844 (903)
+-.-..|.| .++++++- +.+.|.+||+.- ..+..+.. .-+....++..|
T Consensus 183 P~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G----~l~~r~as~g~LNaPWG~a~APa~FG~ 258 (336)
T TIGR03118 183 PALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNG----QLLRRVASSGRLNAPWGLAIAPESFGS 258 (336)
T ss_pred CCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCC----cEEEEeccCCcccCCceeeeChhhhCC
Confidence 100001111 13333322 122578888753 34444422 123344455543
Q ss_pred -CCCEEEEEECCCeEEEEECCCCcEE-EEccCC------CCEEEEEEec
Q 002591 845 -TYPSLLVIGCYQSLELWNMSENKTM-TLTAHE------GLIAALAVST 885 (903)
Q Consensus 845 -~g~~l~t~s~dg~I~vwdl~~~~~~-~~~~h~------~~V~sl~~sp 885 (903)
.+..|+---.||+|..||..+++.+ .+.... ..++.|.|..
T Consensus 259 ~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 259 LSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 3455555556899999999988876 443322 3567888854
No 494
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=87.65 E-value=48 Score=36.38 Aligned_cols=195 Identities=10% Similarity=0.035 Sum_probs=89.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCce---------------eEEeccCCCCeEEEEECCCC-CEEEEEe
Q 002591 622 STSKVICCHFSSDGKLLATGG-HDKKAVLWHTDTLKS---------------KTNLEEHSSLITDVRFSPSM-PRLATSS 684 (903)
Q Consensus 622 H~~~V~~l~fspdg~~Latgs-~Dg~V~vWd~~t~~~---------------~~~l~~h~~~V~~l~fspdg-~~Lasgs 684 (903)
+...|+++...+.-+.|++-+ ....++++++..... ....-.|............. ..++++.
T Consensus 41 ~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A 120 (302)
T smart00036 41 GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLVIRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVA 120 (302)
T ss_pred CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCccccccccceEeCCcCCceEEEEEEcCCCcEEEEEE
Confidence 456899999988777666544 334499999853221 01122344433333333222 2345555
Q ss_pred CCCcEEEEeCCCCCceeEEec-------cCCCceEEEEecCCC-CeEEEEEeCCCcEEEEEcCC--CeeeE-----Eeec
Q 002591 685 FDKTVRVWDADNPGYSLRTFM-------GHSASVMSLDFHPNK-DDLICSCDGDGEIRYWSINN--GSCTR-----VFKG 749 (903)
Q Consensus 685 ~Dg~I~IWDl~~~~~~~~~~~-------~h~~~V~sl~fsp~~-~~ll~sgs~Dg~I~iwDi~t--~~~~~-----~~~~ 749 (903)
...+|.++....+......+. .-..++..+..+++. ...++.|+..+...++++.. ..... ....
T Consensus 121 ~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~lcvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~ 200 (302)
T smart00036 121 LQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPGICIGSDKGGGDVVQFHESLVSKEDLSLPFLSEE 200 (302)
T ss_pred cCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceEEEEEEcCCCCeEEEEeecccccccccccccccc
Confidence 567787775544211111111 111233333323221 22455565433344454432 11000 0011
Q ss_pred ---CceeEEEecCCCEEEEEEcCCeEEEEECCC-Ce-EEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCC
Q 002591 750 ---GTAQMRFQPHLGRYLAAAAENVVSILDAET-QA-CRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSG 821 (903)
Q Consensus 750 ---~~~~v~~sp~~~~ll~~s~dg~I~i~D~~t-~~-~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~ 821 (903)
....+...++ +.++.+..+. ..+.|... .. ....+. -.....++++. ..+|++-..+.|.|+++.++
T Consensus 201 ~~~~p~~i~~l~~-~e~Llc~~~~-~v~Vn~~G~~~~r~~~l~-w~~~p~~~~~~--~pyll~~~~~~ievr~l~~~ 272 (302)
T smart00036 201 TSLKPISVVQVPR-DEFLLCYDEF-GVFVNLYGKRRSRNPILH-WEFMPESFAYH--SPYLLAFHDNGIEIRSIKTG 272 (302)
T ss_pred cccCceEEEEECC-CeEEEEECcE-EEEEeCCCCccccceEEE-cCCcccEEEEE--CCEEEEEcCCcEEEEECCCC
Confidence 1111222222 3455444443 33334332 11 111121 23445667776 46777777778999999887
No 495
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=87.55 E-value=88 Score=39.26 Aligned_cols=72 Identities=17% Similarity=0.255 Sum_probs=47.2
Q ss_pred CCCCeEEEEEc---C----CCCEEEEEeCCCcEEEEECC------C---------CceeEEecc---CCCCeEEEEECCC
Q 002591 622 STSKVICCHFS---S----DGKLLATGGHDKKAVLWHTD------T---------LKSKTNLEE---HSSLITDVRFSPS 676 (903)
Q Consensus 622 H~~~V~~l~fs---p----dg~~Latgs~Dg~V~vWd~~------t---------~~~~~~l~~---h~~~V~~l~fspd 676 (903)
-..+|..|+|. . ..++|++= ....+.|+... . ...+..+.. ...+..+|+|+|.
T Consensus 78 ~~~PI~qI~fa~~~~~~~~~~~~l~Vr-t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~ 156 (765)
T PF10214_consen 78 DGSPIKQIKFATLSESFDEKSRWLAVR-TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPW 156 (765)
T ss_pred CCCCeeEEEecccccccCCcCcEEEEE-cCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccC
Confidence 45688888887 2 22355554 34566666611 1 123333432 3446889999985
Q ss_pred -CCEEEEEeCCCcEEEEeC
Q 002591 677 -MPRLATSSFDKTVRVWDA 694 (903)
Q Consensus 677 -g~~Lasgs~Dg~I~IWDl 694 (903)
...||+....|...|||+
T Consensus 157 ~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 157 DQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred ccceEEEEeccCcEEEEEe
Confidence 458999999999999999
No 496
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=87.50 E-value=2.1 Score=31.99 Aligned_cols=31 Identities=32% Similarity=0.574 Sum_probs=26.5
Q ss_pred CCeEEEEEcCCC---CEEEEEeCCCcEEEEECCC
Q 002591 624 SKVICCHFSSDG---KLLATGGHDKKAVLWHTDT 654 (903)
Q Consensus 624 ~~V~~l~fspdg---~~Latgs~Dg~V~vWd~~t 654 (903)
+.|.+|.|+|+. .+||.+-.-|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 479999999744 5999998889999999984
No 497
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=87.47 E-value=5.3 Score=48.33 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=74.5
Q ss_pred eEEEEEcC--CCCEEEEEeCCCcEEEEECCC-------C-------------ceeEEeccCCCCeEEEEEC--CCCCEEE
Q 002591 626 VICCHFSS--DGKLLATGGHDKKAVLWHTDT-------L-------------KSKTNLEEHSSLITDVRFS--PSMPRLA 681 (903)
Q Consensus 626 V~~l~fsp--dg~~Latgs~Dg~V~vWd~~t-------~-------------~~~~~l~~h~~~V~~l~fs--pdg~~La 681 (903)
|+-|.... +...|+.+..||.|.+|.+++ . ++...+. ....++.|+++ ...++||
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIA 181 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIA 181 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEE
Confidence 44444433 456899999999999997631 0 0111222 34578999998 7778889
Q ss_pred EEeCCCcEEEEeCCCC--CceeEEeccCCCceEEEEecCCC--C---eEEEEEeCCCcEEEEEc
Q 002591 682 TSSFDKTVRVWDADNP--GYSLRTFMGHSASVMSLDFHPNK--D---DLICSCDGDGEIRYWSI 738 (903)
Q Consensus 682 sgs~Dg~I~IWDl~~~--~~~~~~~~~h~~~V~sl~fsp~~--~---~ll~sgs~Dg~I~iwDi 738 (903)
+++....|.||-.... ......-..|...|.+|+|.++. . ..+++++-.|.+.+|++
T Consensus 182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 8888888888755431 11111122366789999998764 1 26778888999999888
No 498
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=87.22 E-value=4.1 Score=42.49 Aligned_cols=67 Identities=10% Similarity=0.117 Sum_probs=44.5
Q ss_pred EEEecCCCEEEEEEcCCeEEEEECCCCeEEEEe-------c-------CCCCCeEEEEEcCCCCEEEEEeCCeEEEEECC
Q 002591 754 MRFQPHLGRYLAAAAENVVSILDAETQACRLSL-------Q-------GHTKPIDSVCWDPSGELLASVSEDSVRVWTVG 819 (903)
Q Consensus 754 v~~sp~~~~ll~~s~dg~I~i~D~~t~~~~~~l-------~-------~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~ 819 (903)
+.+...+.++++.+.+|.+++||+.+++.+..- . .....|..+.++.+|.-|++-+.+..+.|+..
T Consensus 16 ~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~lsng~~y~y~~~ 95 (219)
T PF07569_consen 16 SFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLSNGDSYSYSPD 95 (219)
T ss_pred EEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEeCCCEEEeccc
Confidence 334455566666666677777776666554321 1 24466888888888888887777777888875
Q ss_pred C
Q 002591 820 S 820 (903)
Q Consensus 820 s 820 (903)
-
T Consensus 96 L 96 (219)
T PF07569_consen 96 L 96 (219)
T ss_pred c
Confidence 4
No 499
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=87.05 E-value=11 Score=44.77 Aligned_cols=218 Identities=13% Similarity=0.194 Sum_probs=0.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeEEeccCCCCeEEEEECCCCCEEEEEeCCCcEEEEeCCCCCceeE
Q 002591 623 TSKVICCHFSSDGKLLATGGHDKKAVLWHTDTLKSKTNLEEHSSLITDVRFSPSMPRLATSSFDKTVRVWDADNPGYSLR 702 (903)
Q Consensus 623 ~~~V~~l~fspdg~~Latgs~Dg~V~vWd~~t~~~~~~l~~h~~~V~~l~fspdg~~Lasgs~Dg~I~IWDl~~~~~~~~ 702 (903)
...+++|.-+|.|..++.+..||.|++|++.. +....+-....+-..+.|...| |+++..|..+.-|.-+ +....
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~-r~qski~~~~~p~~nlv~tnhg--l~~~tsdrr~la~~~d--gvvqq 88 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIP-RRQSKICEEAKPKENLVFTNHG--LVTATSDRRALAWKED--GVVQQ 88 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecc-cchhhhhhhcCCccceeeeccc--eEEEeccchhheeecc--Ccchh
Q ss_pred Eec---cCCCceEEEEecCCCCeEEEEEeCCCcEEEEE--cCCCeeeEEeecCceeEEEecCCCEEEEEEcCCeEEEEEC
Q 002591 703 TFM---GHSASVMSLDFHPNKDDLICSCDGDGEIRYWS--INNGSCTRVFKGGTAQMRFQPHLGRYLAAAAENVVSILDA 777 (903)
Q Consensus 703 ~~~---~h~~~V~sl~fsp~~~~ll~sgs~Dg~I~iwD--i~t~~~~~~~~~~~~~v~~sp~~~~ll~~s~dg~I~i~D~ 777 (903)
.|. .......++...|...+++ |.--|-|.-+| ++.+-....|+ ++-..-..|.+-|+
T Consensus 89 qfdyndqsekefss~~cdptaqnvv--gtlcggv~q~dcclrr~i~knkfe---------------~tyv~pshvilkdl 151 (1636)
T KOG3616|consen 89 QFDYNDQSEKEFSSILCDPTAQNVV--GTLCGGVEQFDCCLRRGILKNKFE---------------LTYVAPSHVILKDL 151 (1636)
T ss_pred hccccchhhhhccceecCchhhhhh--hhhccceeeehHHHHhHHHhccce---------------eEEeccceeeeecc
Q ss_pred CCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCCeEEEEECCCCCCcceEEEeecCCCceEEEEEe-CCCCEEEEEECCC
Q 002591 778 ETQACRLSLQGHTKPIDSVCWDPSGELLASVSEDSVRVWTVGSGSEGECVHELSCNGNKFHSCVFH-PTYPSLLVIGCYQ 856 (903)
Q Consensus 778 ~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d~I~iwdl~s~~~~~~i~~~~~~~~~i~si~~s-p~g~~l~t~s~dg 856 (903)
.++.....+....-.|..+.+--..+|++.-...+|.|=|+. ...+..++|- ..|..-+.-..++
T Consensus 152 sn~trt~l~s~~g~aidelkilgkdryli~~ts~siii~d~e--------------s~rfsei~wqgsgg~ekfffd~~n 217 (1636)
T KOG3616|consen 152 SNDTRTNLISHKGLAIDELKILGKDRYLIAHTSESIIIADLE--------------SNRFSEIAWQGSGGHEKFFFDFEN 217 (1636)
T ss_pred cCCceEeeeecCCcchhhhhhccccceEEeeccccEEEeecc--------------cchhhhhhcccCCCcceeeeecCc
Q ss_pred eEEEEECCCCcEEEEccCCC
Q 002591 857 SLELWNMSENKTMTLTAHEG 876 (903)
Q Consensus 857 ~I~vwdl~~~~~~~~~~h~~ 876 (903)
...|++..+-.++.......
T Consensus 218 ~cli~nageltlveyg~d~s 237 (1636)
T KOG3616|consen 218 CCLIFNAGELTLVEYGNDDS 237 (1636)
T ss_pred EEEEEecCeeEEEEecCCCc
No 500
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=87.04 E-value=31 Score=38.52 Aligned_cols=182 Identities=10% Similarity=-0.031 Sum_probs=0.0
Q ss_pred EEEEcCCCCEEEEEeCC-----------CcEEEEECCCCceeEEeccCCCCeEEEEEC--CCCCEEEEEeCC--------
Q 002591 628 CCHFSSDGKLLATGGHD-----------KKAVLWHTDTLKSKTNLEEHSSLITDVRFS--PSMPRLATSSFD-------- 686 (903)
Q Consensus 628 ~l~fspdg~~Latgs~D-----------g~V~vWd~~t~~~~~~l~~h~~~V~~l~fs--pdg~~Lasgs~D-------- 686 (903)
.....-++++.+.|+.+ ..+..||..+.+=............+.+.. -++++.+.|+.+
T Consensus 57 ~~~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~~~~p~~~~~~~~~~~~~g~IYviGG~~~~~~~~~~ 136 (346)
T TIGR03547 57 AVAAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLDTRSPVGLLGASGFSLHNGQAYFTGGVNKNIFDGYF 136 (346)
T ss_pred ceEEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCCCCCCCcccceeEEEEeCCEEEEEcCcChHHHHHHH
Q ss_pred -------------------------------CcEEEEeCCCCCceeEEeccC-CCceEEEEecCCCCeEEEEEeCC----
Q 002591 687 -------------------------------KTVRVWDADNPGYSLRTFMGH-SASVMSLDFHPNKDDLICSCDGD---- 730 (903)
Q Consensus 687 -------------------------------g~I~IWDl~~~~~~~~~~~~h-~~~V~sl~fsp~~~~ll~sgs~D---- 730 (903)
..|.+||..+.......-... ...-.+++.. ++.+++.|+.+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~~~--~~~iyv~GG~~~~~~ 214 (346)
T TIGR03547 137 ADLSAADKDSEPKDKLIAAYFSQPPEDYFWNKNVLSYDPSTNQWRNLGENPFLGTAGSAIVHK--GNKLLLINGEIKPGL 214 (346)
T ss_pred hhHhhcCccchhhhhhHHHHhCCChhHcCccceEEEEECCCCceeECccCCCCcCCCceEEEE--CCEEEEEeeeeCCCc
Q ss_pred --CcEEEEEcCCCeeeEEeecCc------------eeEEEecCCCEEEEEEcC----------------------CeEEE
Q 002591 731 --GEIRYWSINNGSCTRVFKGGT------------AQMRFQPHLGRYLAAAAE----------------------NVVSI 774 (903)
Q Consensus 731 --g~I~iwDi~t~~~~~~~~~~~------------~~v~~sp~~~~ll~~s~d----------------------g~I~i 774 (903)
..+.+||+...+......... .......++..+++|+.+ ..+.+
T Consensus 215 ~~~~~~~y~~~~~~~~W~~~~~m~~~r~~~~~~~~~~~a~~~~~~Iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 294 (346)
T TIGR03547 215 RTAEVKQYLFTGGKLEWNKLPPLPPPKSSSQEGLAGAFAGISNGVLLVAGGANFPGAQENYKNGKLYAHEGLIKAWSSEV 294 (346)
T ss_pred cchheEEEEecCCCceeeecCCCCCCCCCccccccEEeeeEECCEEEEeecCCCCCchhhhhcCCccccCCCCceeEeeE
Q ss_pred EECCCCeEEEEecCCCCCeEEEEEcCCCCEEEEEeCC
Q 002591 775 LDAETQACRLSLQGHTKPIDSVCWDPSGELLASVSED 811 (903)
Q Consensus 775 ~D~~t~~~~~~l~~h~~~V~sl~~spdg~~lasgs~d 811 (903)
||.++.+-...-.-........+..-++++++.|+.+
T Consensus 295 yd~~~~~W~~~~~lp~~~~~~~~~~~~~~iyv~GG~~ 331 (346)
T TIGR03547 295 YALDNGKWSKVGKLPQGLAYGVSVSWNNGVLLIGGEN 331 (346)
T ss_pred EEecCCcccccCCCCCCceeeEEEEcCCEEEEEeccC
Done!