Query 002601
Match_columns 902
No_of_seqs 574 out of 3371
Neff 7.1
Searched_HMMs 29240
Date Tue Mar 26 16:29:23 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002601.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1319-1322//hhsearch_pdb/002601hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rio_A Serine/threonine-protei 1.0 1 1 565.7 21.0 398 469-899 11-434 (434)
2 3p23_A Serine/threonine-protei 1.0 1 1 561.7 20.4 387 473-901 24-420 (432)
3 4b9d_A Serine/threonine-protei 1.0 1 1 412.4 15.4 252 473-768 24-283 (350)
4 4fie_A Serine/threonine-protei 1.0 1 1 410.4 21.6 250 473-769 151-408 (423)
5 4fih_A Serine/threonine-protei 1.0 1 1 409.6 22.1 251 473-770 74-332 (346)
6 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 407.0 20.0 255 472-770 31-299 (311)
7 3hyh_A Carbon catabolite-derep 1.0 1 1 403.0 18.1 251 468-767 9-268 (275)
8 3v5w_A G-protein coupled recep 1.0 1 1 401.7 20.7 254 471-771 187-459 (689)
9 3ubd_A Ribosomal protein S6 ki 1.0 1 1 401.2 16.4 253 472-770 23-290 (304)
10 4g3f_A NF-kappa-beta-inducing 1.0 1 1 400.5 17.6 252 472-767 57-328 (336)
No 1
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=1.00 E-value=1 Score=565.66 Aligned_cols=398 Identities=40% Similarity=0.766 Sum_probs=328.4
Q ss_pred CCCCCEEEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECC
Q ss_conf 20152299946644039659999985389499999931587069999999999918999755741434686512655213
Q 002601 469 RRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (902)
Q Consensus 469 ~~i~~~~~~~~~LG~GsfGtVy~a~~~~g~~VAVKrL~~~~~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~lyLV~E~ 548 (902)
..+.+.+...+.||+|+||+||+++..+|+.||||++.....+...+|+..+....+|||||++++++.+.+..|+|||+
T Consensus 11 ~~l~~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp CSCSSCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred HHHHHEEECCCEEEECCCEEEEEEEEECCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEEC
T ss_conf 23200465167476678859999788899689999986777778999999999615999758188899608769999746
Q ss_pred CCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 46881247988359856774331025611488976402343430247777517999899999999620123421103621
Q 002601 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (902)
Q Consensus 549 c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yLHs~~Ii 628 (902)
|.++|.+++..... .... ....++..++.++.|++.||+|||+.+|+
T Consensus 91 ~~gsL~~~l~~~~~-~~~~--------------------------------~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 137 (434)
T 2rio_A 91 CNLNLQDLVESKNV-SDEN--------------------------------LKLQKEYNPISLLRQIASGVAHLHSLKII 137 (434)
T ss_dssp CSEEHHHHHHTC---------------------------------------------CCHHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCHHHHHHCCCC-CCHH--------------------------------HHHCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 78989999963677-7123--------------------------------32023001999999999999999979844
Q ss_pred CCCCCCCEEEECCC-----------CCCEEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHCC-------CCCC
Q ss_conf 34445611685369-----------99238881478620124877655-34645889865457011002-------9999
Q 002601 629 HRDLKPQNVLISKD-----------KSFCAKLSDMGISKRLQGDMSCL-TQNATGYGSSGWQAPEQLLQ-------GRQT 689 (902)
Q Consensus 629 HrDLKp~NILL~~d-----------~~~~vKLsDFGla~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~-------~~~t 689 (902)
||||||+|||++.+ ....+||+|||+++......... .......||+.|+|||++.+ ..++
T Consensus 138 HrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~ 217 (434)
T 2rio_A 138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLT 217 (434)
T ss_dssp CCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCC
T ss_pred CCCCCHHHEEEECCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCC
T ss_conf 26787576898468655443346777517997535654023888762213414889887730888854555666566766
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC------CCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCC
Q ss_conf 852146567999999938999999835667889741133322------36995799999800599999996988897297
Q 002601 690 RAIDLFSLGCILFFCITGGKHPYGESFERDANIVKDRKDLFL------VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHP 763 (902)
Q Consensus 690 ~ksDVwSlGvIL~elltG~~~Pf~~~~~~~~~i~~~~~~~~~------~~~~~e~~dLI~~lL~~dP~~Rpt~~elL~HP 763 (902)
.++|||||||++|||++++.+||.+.......+......... ...++++.++|.+||+.||.+||++.++++||
T Consensus 218 ~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 218 RSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp THHHHHHHHHHHHHHHTTSCCTTCSTTTHHHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHCCCHHHHHHCC
T ss_conf 04545747989999971798998873032788862777842001346430219999999997328943487999998498
Q ss_pred CCCCCCHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
Q ss_conf 7778300133553102200001245437999999877776-405652278749999853100367841089999984066
Q 002601 764 FFWTADTRLSFLRDVSDRVELEDRESDSKLLRALEGIALV-ALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNK 842 (902)
Q Consensus 764 fF~~~~~~~~~l~~vs~~~e~~~~~~~~~l~~~le~~~~~-~~~~~w~~~~d~~l~~~~~~~R~y~~~~vrdLLr~irnk 842 (902)
|||+..++..++.+++++.+.+.+...+.++..++..... ...++|..++++.++++++++|+|++++++||||+||||
T Consensus 298 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~y~~~~~~dllr~~rn~ 377 (434)
T 2rio_A 298 LFWPKSKKLEFLLKVSDRLEIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDNLERYRKYHSSKLMDLLRALRNK 377 (434)
T ss_dssp GGSCHHHHHHHHHHHHHHHHTSCBTTBCHHHHHHHTTHHHHSCSSCGGGGSCSTTCC-----CCCCSSCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHCH
T ss_conf 63794788999999788875145689668999988278704327886575699998642271465831098999999740
Q ss_pred CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCC
Q ss_conf 676667987789870899975334200048840999999999760110153101267
Q 002601 843 SNHFRELPQDIQELLGSHPEGFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTN 899 (902)
Q Consensus 843 ~~h~~el~~~~~~~~G~~p~~f~~yf~~~fP~ll~~~y~~~~~~~~~e~~~~~y~~~ 899 (902)
.|||+|+|+++++.+|++|+||..||++|||+||+|+|.+++++|++|+.|++||..
T Consensus 378 ~~h~~~~~~~~~~~~~~~~~~~~~y~~~~fp~l~~~~y~~~~~~~~~~~~~~~~~~~ 434 (434)
T 2rio_A 378 YHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQILREFLYS 434 (434)
T ss_dssp HHTGGGSCHHHHHHTCSTTHHHHHHHHHHCTTHHHHHHHHHHHHCTTCTTTHHHHHC
T ss_pred HHHHHHHCHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 344666489999984899348999998766379999999998652577688886139
No 2
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=1.00 E-value=1 Score=561.69 Aligned_cols=387 Identities=35% Similarity=0.685 Sum_probs=320.7
Q ss_pred CEEEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCC
Q ss_conf 22999466440396599999853894999999315870699999999999189997557414346865126552134688
Q 002601 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (902)
Q Consensus 473 ~~~~~~~~LG~GsfGtVy~a~~~~g~~VAVKrL~~~~~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~lyLV~E~c~~s 552 (902)
..|...+.||+|+||+||..+..+|+.||||++.........+|+..+....+|||||++++++.+.+..|+|||+|.++
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g~ 103 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAAT 103 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred EEEECCCEEECCCCEEEEEEEEECCEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEEEECCCCC
T ss_conf 78732786602868799998984893799999887777899999999985457979675999984199899998778897
Q ss_pred HHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 12479883598567743310256114889764023434302477775179998999999996201234211036213444
Q 002601 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHRDL 632 (902)
Q Consensus 553 L~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yLHs~~IiHrDL 632 (902)
|.+++..... .+++..+..++.|++.||+|||+.+|+||||
T Consensus 104 L~~~l~~~~~---------------------------------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDl 144 (432)
T 3p23_A 104 LQEYVEQKDF---------------------------------------AHLGLEPITLLQQTTSGLAHLHSLNIVHRDL 144 (432)
T ss_dssp HHHHHHSSSC---------------------------------------CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHCCC---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHCCCEECCC
T ss_conf 9999971687---------------------------------------7543229999999999999999896770789
Q ss_pred CCCEEEECC---CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHC---CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 561168536---9992388814786201248776553464588986545701100---2999985214656799999993
Q 002601 633 KPQNVLISK---DKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLL---QGRQTRAIDLFSLGCILFFCIT 706 (902)
Q Consensus 633 Kp~NILL~~---d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~t~ksDVwSlGvIL~ellt 706 (902)
||+|||++. ++...+||+|||+|+................||+.|+|||++. ...++.++|||||||++|||++
T Consensus 145 Kp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt 224 (432)
T 3p23_A 145 KPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224 (432)
T ss_dssp STTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHT
T ss_pred CHHHEEEECCCCCCCEEEEEECCCCEEECCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 88998982577788614898325643331578765011146678868658666503446688728889999999999980
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCC----CCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCCH
Q ss_conf 8999999835667889741133322----369957999998005999999969888972977778300133553102200
Q 002601 707 GGKHPYGESFERDANIVKDRKDLFL----VEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADTRLSFLRDVSDRV 782 (902)
Q Consensus 707 G~~~Pf~~~~~~~~~i~~~~~~~~~----~~~~~e~~dLI~~lL~~dP~~Rpt~~elL~HPfF~~~~~~~~~l~~vs~~~ 782 (902)
++.+||+.................. ...++.+.++|.+||+.||.+||++.++++|||||+.+++..++++++++.
T Consensus 225 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~~~~~~~~~~~~~~~ 304 (432)
T 3p23_A 225 EGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRI 304 (432)
T ss_dssp TSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_conf 89999422367788898456873224755333099999999987589755879999984942038688998899999986
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCC
Q ss_conf 00124543799999987777640565227874999985310036784108999998406667666798778987089997
Q 002601 783 ELEDRESDSKLLRALEGIALVALNGKWDEKMETKFIENIGRYRRYKYDNVRDLLRVIRNKSNHFRELPQDIQELLGSHPE 862 (902)
Q Consensus 783 e~~~~~~~~~l~~~le~~~~~~~~~~w~~~~d~~l~~~~~~~R~y~~~~vrdLLr~irnk~~h~~el~~~~~~~~G~~p~ 862 (902)
+.+. ....+...++.....+...+|.+.++..++.+++++|+|++++++||||+||||+|||+|+|+++|+.+|+.|+
T Consensus 305 ~~~~--~~~~~~~~l~~~~~~~~~~~w~~~i~~~~~~~l~~~~~~~~~~~~dllr~~rn~~~h~~~~~~~~~~~~g~~p~ 382 (432)
T 3p23_A 305 EKES--LDGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRAMRNKKHHYRELPAEVRETLGTLPD 382 (432)
T ss_dssp SCSC--SSCHHHHHHHHTCSTTTTSCGGGSSCHHHHHHTSSCCSCCSSCHHHHHHHHHHHHHTTTTSCHHHHHHHCSTTH
T ss_pred HCCC--CCCHHHHHHHHCCCCCCCCCHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHCHHHCCHHHHHHHCCCCH
T ss_conf 4055--55668899987166101075877559998874667367682389999999967400365529999986089952
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCC
Q ss_conf 533420004884099999999976011015310126799
Q 002601 863 GFYNYFSCRFPKLLIEVYNVIFTYCKGEEVFHKYVTNDQ 901 (902)
Q Consensus 863 ~f~~yf~~~fP~ll~~~y~~~~~~~~~e~~~~~y~~~~~ 901 (902)
||..||++|||+||||+|.++. .|+.|+.|++||..+.
T Consensus 383 ~~~~y~~~~fp~l~~~~y~~~~-~~~~~~~~~~~~~~~~ 420 (432)
T 3p23_A 383 DFVCYFTSRFPHLLAHTYRAME-LCSHERLFQPYYFHEP 420 (432)
T ss_dssp HHHHHHHSSCTTHHHHHHHHGG-GGSSSGGGTTTCCC--
T ss_pred HHHHHHHHHCCHHHHHHHHHHH-HCCCCHHHHHHCCCCC
T ss_conf 8999987657189999999999-7688656652268996
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=412.42 Aligned_cols=252 Identities=23% Similarity=0.393 Sum_probs=205.5
Q ss_pred CEEEEEEEECCCCCEEEEEEE-EECCCEEEEEEECCCCC-----HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEE
Q ss_conf 229994664403965999998-53894999999315870-----699999999999189997557414346865126552
Q 002601 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (902)
Q Consensus 473 ~~~~~~~~LG~GsfGtVy~a~-~~~g~~VAVKrL~~~~~-----~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~lyLV~ 546 (902)
++|.+.+.||+|+||+||++. ..+|+.||||++.+... +...+|+. +++.++|||||++++++.+++.+||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA-VLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHH-HHHHCCCCCCCCEEEEEEECCEEEEEE
T ss_conf 2558847970277939999998899989999998658789799999999999-998779989891999999899999999
Q ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 13468812479883598567743310256114889764023434302477775179998999999996201234211036
Q 002601 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIG 626 (902)
Q Consensus 547 E~c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yLHs~~ 626 (902)
|| +.+|+|.+++.... ...+++..++.|+.||+.||+|||+++
T Consensus 103 Ey----------~~gg~L~~~i~~~~---------------------------~~~~~e~~~~~~~~qi~~aL~ylH~~~ 145 (350)
T 4b9d_A 103 DY----------CEGGDLFKRINAQK---------------------------GVLFQEDQILDWFVQICLALKHVHDRK 145 (350)
T ss_dssp EC----------CTTCBHHHHHHHTT---------------------------TCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EC----------CCCCCHHHHHHHCC---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 48----------89983999999738---------------------------999978999999999999999999899
Q ss_pred CCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 21344456116853699923888147862012487765534645889865457011002999985214656799999993
Q 002601 627 LIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCIT 706 (902)
Q Consensus 627 IiHrDLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvIL~ellt 706 (902)
|+||||||+||||+.++. +||+|||+|+.+.... ....+.+||+.|||||++.+..|+.++|||||||++|||++
T Consensus 146 IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~---~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemlt 220 (350)
T 4b9d_A 146 ILHRDIKSQNIFLTKDGT--VQLGDFGIARVLNSTV---ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220 (350)
T ss_dssp CEETTCCGGGEEECTTCC--EEECSTTEESCCCHHH---HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHEEECCCCC--EEECCCCCCEEECCCC---CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 151359789979878999--8976465214406885---41014578836039999879998959999999999999997
Q ss_pred CCCCCCCCCHH-HHH-HHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 89999998356-678-897411333223699579999980059999999698889729777783
Q 002601 707 GGKHPYGESFE-RDA-NIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTA 768 (902)
Q Consensus 707 G~~~Pf~~~~~-~~~-~i~~~~~~~~~~~~~~e~~dLI~~lL~~dP~~Rpt~~elL~HPfF~~~ 768 (902)
| .+||..... ... .+........+...++++.+||.+||+.||.+|||++|+++||||...
T Consensus 221 G-~~PF~~~~~~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 221 L-KHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp S-SCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred C-CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHHCC
T ss_conf 8-79989969999999998089999975579999999999855896679089999639976167
No 4
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=410.42 Aligned_cols=250 Identities=26% Similarity=0.424 Sum_probs=204.2
Q ss_pred CEEEEEEEECCCCCEEEEEEE-EECCCEEEEEEECCCC---CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECC
Q ss_conf 229994664403965999998-5389499999931587---069999999999918999755741434686512655213
Q 002601 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (902)
Q Consensus 473 ~~~~~~~~LG~GsfGtVy~a~-~~~g~~VAVKrL~~~~---~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~lyLV~E~ 548 (902)
+.|...++||+|+||+||+|. ..+|+.||||++.... .+...+|+. ++..++|||||++++++.+.+.+||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~-il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-IMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHH-HHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 84386169624818489999999999899999986255468999999999-99857998987168999989999999969
Q ss_pred CCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 46881247988359856774331025611488976402343430247777517999899999999620123421103621
Q 002601 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (902)
Q Consensus 549 c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yLHs~~Ii 628 (902)
|. +|+|.+++. ...+++..+..|+.||+.||+|||+++|+
T Consensus 230 ~~----------gG~L~~~i~------------------------------~~~l~e~~~~~~~~qil~aL~ylH~~~Ii 269 (423)
T 4fie_A 230 LE----------GGALTDIVT------------------------------HTRMNEEQIAAVCLAVLQALSVLHAQGVI 269 (423)
T ss_dssp CT----------TEEHHHHHH------------------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CC----------CCCHHHHHH------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCEE
T ss_conf 89----------982898876------------------------------16989999999999999999999988904
Q ss_pred CCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 34445611685369992388814786201248776553464588986545701100299998521465679999999389
Q 002601 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 708 (902)
Q Consensus 629 HrDLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvIL~elltG~ 708 (902)
||||||+||||+.++. +||+|||+|+.+.... ....+.+||+.|||||++....|+.++|||||||++|||++|
T Consensus 270 HRDiKp~NILl~~~g~--vKl~DFGla~~~~~~~---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G- 343 (423)
T 4fie_A 270 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG- 343 (423)
T ss_dssp CCCCSTTTEEECTTCC--EEECCCTTCEECCSSC---CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-
T ss_pred CCCCCHHHEEECCCCC--EEEECCCCCEECCCCC---CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC-
T ss_conf 4657877789858999--8980372654777887---643466647472799997799999689999999999999978-
Q ss_pred CCCCCCC-HHHHHHHHHHCC---CCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 9999983-566788974113---332236995799999800599999996988897297777830
Q 002601 709 KHPYGES-FERDANIVKDRK---DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTAD 769 (902)
Q Consensus 709 ~~Pf~~~-~~~~~~i~~~~~---~~~~~~~~~e~~dLI~~lL~~dP~~Rpt~~elL~HPfF~~~~ 769 (902)
.+||.+. .......+.... .......++++++||.+||+.||.+|||+.|+|+||||....
T Consensus 344 ~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 344 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp SCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 79989869999999997279988765012999999999998678956890999996098756899
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=409.59 Aligned_cols=251 Identities=25% Similarity=0.423 Sum_probs=203.8
Q ss_pred CEEEEEEEECCCCCEEEEEEE-EECCCEEEEEEECCCC---CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECC
Q ss_conf 229994664403965999998-5389499999931587---069999999999918999755741434686512655213
Q 002601 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (902)
Q Consensus 473 ~~~~~~~~LG~GsfGtVy~a~-~~~g~~VAVKrL~~~~---~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~lyLV~E~ 548 (902)
+.|...++||+|+||+||+|. ..+|+.||||++.... .+...+|+. ++..++|||||++++++.+++.+||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~-il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV-IMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHH-HHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HHCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHH-HHHHCCCCCCCCEEEEEEECCEEEEEEEC
T ss_conf 75387079602728299999998999899999985276568999999999-99867998999199999989999999969
Q ss_pred CCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 46881247988359856774331025611488976402343430247777517999899999999620123421103621
Q 002601 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLI 628 (902)
Q Consensus 549 c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yLHs~~Ii 628 (902)
|. +|+|.+++. ...+++..+..|+.||+.||+|||+++|+
T Consensus 153 ~~----------gg~L~~~l~------------------------------~~~l~e~~~~~~~~qi~~aL~ylH~~~Ii 192 (346)
T 4fih_A 153 LE----------GGALTDIVT------------------------------HTRMNEEQIAAVCLAVLQALSVLHAQGVI 192 (346)
T ss_dssp CT----------TEEHHHHHH------------------------------HSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred CC----------CCCHHHHHH------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 89----------980899987------------------------------18989999999999999999999988835
Q ss_pred CCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 34445611685369992388814786201248776553464588986545701100299998521465679999999389
Q 002601 629 HRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 708 (902)
Q Consensus 629 HrDLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvIL~elltG~ 708 (902)
||||||+||||+.++. +||+|||+|+.+.... ....+.+||+.|||||++....|+.++||||+||++|||++|
T Consensus 193 HRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~---~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G- 266 (346)
T 4fih_A 193 HRDIKSDSILLTHDGR--VKLSDFGFCAQVSKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG- 266 (346)
T ss_dssp CCCCSGGGEEECTTCC--EEECCCTTCEECCSSS---CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS-
T ss_pred CCCCCHHHEEECCCCC--EEEECCCCCEECCCCC---CCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC-
T ss_conf 5627889978879998--8990275753667887---753465627582799997799999689999999999999978-
Q ss_pred CCCCCCC-HHHHHHHHHHCC---CCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCH
Q ss_conf 9999983-566788974113---3322369957999998005999999969888972977778300
Q 002601 709 KHPYGES-FERDANIVKDRK---DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWTADT 770 (902)
Q Consensus 709 ~~Pf~~~-~~~~~~i~~~~~---~~~~~~~~~e~~dLI~~lL~~dP~~Rpt~~elL~HPfF~~~~~ 770 (902)
.+||.+. .......+.... .......++++++||.+||+.||.+|||++|+++||||.....
T Consensus 267 ~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 267 EPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 332 (346)
T ss_dssp SCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 799898599999999971799988750229999999999986799568909999960986568999
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=407.00 Aligned_cols=255 Identities=27% Similarity=0.402 Sum_probs=209.3
Q ss_pred CCEEEEEEEECCCCCEEEEEEE-EECCCEEEEEEECCCC------CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEE
Q ss_conf 5229994664403965999998-5389499999931587------06999999999991899975574143468651265
Q 002601 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (902)
Q Consensus 472 ~~~~~~~~~LG~GsfGtVy~a~-~~~g~~VAVKrL~~~~------~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~lyL 544 (902)
.++|.+.+.||+|+||+||++. ..+|+.||||++.+.. .....+|+. +++.++|||||++++++.+++.+||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~yi 109 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD-VMSRLDHPFFVKLYFTFQDDEKLYF 109 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHH-HHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHH-HHHHCCCCCCCEEEEEEEECCEEEE
T ss_conf 523689889831648499999999999899999988888779789999999999-9986799898919999973898999
Q ss_pred EECCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCC
Q ss_conf 52134688124798835985677433102561148897640234343024777751799989999999962012342110
Q 002601 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHE 624 (902)
Q Consensus 545 V~E~c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yLHs 624 (902)
||||| .+|+|.+++. +.+.+++..++.|+.||+.||+|||+
T Consensus 110 vmEy~----------~gG~L~~~i~-----------------------------~~~~l~e~~~~~~~~qi~~al~ylH~ 150 (311)
T 4aw0_A 110 GLSYA----------KNGELLKYIR-----------------------------KIGSFDETCTRFYTAEIVSALEYLHG 150 (311)
T ss_dssp EECCC----------TTEEHHHHHH-----------------------------HHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECC----------CCCCHHHHHH-----------------------------HCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99648----------9989999998-----------------------------74999999999999999999999998
Q ss_pred CCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 36213444561168536999238881478620124877655346458898654570110029999852146567999999
Q 002601 625 IGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFC 704 (902)
Q Consensus 625 ~~IiHrDLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvIL~el 704 (902)
++|+||||||+|||++.++. +||+|||+|+.+..... .....+.+||+.|||||++.+..|+.++||||+||++|+|
T Consensus 151 ~~IiHRDlKPeNILl~~~g~--vKl~DFGla~~~~~~~~-~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyem 227 (311)
T 4aw0_A 151 KGIIHRDLKPENILLNEDMH--IQITDFGTAKVLSPESK-QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 227 (311)
T ss_dssp TTEECSCCSGGGEEECTTSC--EEECCCTTCEECCTTTT-CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHEEECCCCC--EEEEECCCCEECCCCCC-CCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_conf 87826878789969858988--89987687502577877-6543675568030799897689999689899899999999
Q ss_pred HHCCCCCCCCC-HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHH------HHCCCCCCCCCH
Q ss_conf 93899999983-5667889741133322369957999998005999999969888------972977778300
Q 002601 705 ITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQN------VLNHPFFWTADT 770 (902)
Q Consensus 705 ltG~~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~lL~~dP~~Rpt~~e------lL~HPfF~~~~~ 770 (902)
++| .+||... .......+......++...++++++||.+||+.||.+|||++| +++||||.+.++
T Consensus 228 l~G-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw 299 (311)
T 4aw0_A 228 VAG-LPPFRAGNEGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299 (311)
T ss_dssp HHS-SCSSCCSSHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred HHC-CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCH
T ss_conf 749-899899799999999971999999656999999999976289757809679758779877987589898
No 7
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=403.04 Aligned_cols=251 Identities=25% Similarity=0.373 Sum_probs=205.9
Q ss_pred CCCCCCEEEEEEEECCCCCEEEEEEE-EECCCEEEEEEECCCC------CHHHHHHHHHHHHHCCCCCEEEECCCCCCCC
Q ss_conf 52015229994664403965999998-5389499999931587------0699999999999189997557414346865
Q 002601 468 GRRIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (902)
Q Consensus 468 ~~~i~~~~~~~~~LG~GsfGtVy~a~-~~~g~~VAVKrL~~~~------~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~ 540 (902)
+.+++ .|.+.+.||+|+||+||++. ..+|+.||||++.+.. .....+|+. +++.++|||||++++++.+.+
T Consensus 9 G~~ig-~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~-il~~l~HpnIv~~~~~~~~~~ 86 (275)
T 3hyh_A 9 GAHIG-NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREIS-YLRLLRHPHIIKLYDVIKSKD 86 (275)
T ss_dssp ------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHH-HHHHCCCTTBCCEEEEEECSS
T ss_pred CCEEE-CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHH-HHHHCCCCCCCEEEEEEEECC
T ss_conf 98933-8689999821768199999999999899999983788678789999999999-998779989992999999899
Q ss_pred CEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
Q ss_conf 12655213468812479883598567743310256114889764023434302477775179998999999996201234
Q 002601 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLS 620 (902)
Q Consensus 541 ~lyLV~E~c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~ 620 (902)
.+|+|||||+++|.+++ .+.+.+++..+..++.|++.||+
T Consensus 87 ~~~ivmEy~~g~L~~~l----------------------------------------~~~~~l~e~~~~~~~~qi~~al~ 126 (275)
T 3hyh_A 87 EIIMVIEYAGNELFDYI----------------------------------------VQRDKMSEQEARRFFQQIISAVE 126 (275)
T ss_dssp EEEEEEECCCEEHHHHH----------------------------------------HHSCSCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCHHHHH----------------------------------------HHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 89999927899789999----------------------------------------87499999999999999999999
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC-CCCCHHHHHHH
Q ss_conf 21103621344456116853699923888147862012487765534645889865457011002999-98521465679
Q 002601 621 HLHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQ-TRAIDLFSLGC 699 (902)
Q Consensus 621 yLHs~~IiHrDLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-t~ksDVwSlGv 699 (902)
|||+++|+||||||+|||++.++. +||+|||+|+..... ....+.+||+.|||||++.+..+ +.++||||+||
T Consensus 127 ylH~~~IiHRDiKP~NILl~~~~~--vkl~DFGla~~~~~~----~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGv 200 (275)
T 3hyh_A 127 YCHRHKIVHRDLKPENLLLDEHLN--VKIADFGLSNIMTDG----NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 200 (275)
T ss_dssp HHHHTTCCCCCCCTTTEEECTTCC--EEECCSSCC-------------------CTTSCHHHHSSSSCCCTHHHHHHHHH
T ss_pred HHHHCCCCCCCCCHHHEEECCCCC--EEEEECCCCEECCCC----CCCCCEEECCCCCCHHHHCCCCCCCCHHHHHHHHH
T ss_conf 999889306668758768879998--999454777266788----74677028935277455068988898365687899
Q ss_pred HHHHHHHCCCCCCCCC-HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 9999993899999983-5667889741133322369957999998005999999969888972977778
Q 002601 700 ILFFCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNVLNHPFFWT 767 (902)
Q Consensus 700 IL~elltG~~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~lL~~dP~~Rpt~~elL~HPfF~~ 767 (902)
++|+|++| .+||.+. .......+......++...++++++||.+||+.||++|||++|+++||||+.
T Consensus 201 ily~lltg-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 201 ILYVMLCR-RLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp HHHHHHHS-SCSSCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred HHHHHHHC-CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 99999988-799899899999999974999998779999999999986589668919999971920065
No 8
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=401.73 Aligned_cols=254 Identities=26% Similarity=0.365 Sum_probs=206.5
Q ss_pred CCCEEEEEEEECCCCCEEEEEEE-EECCCEEEEEEECCCC-----C-HHHHHH--HHHHHHHCCCCCEEEECCCCCCCCC
Q ss_conf 15229994664403965999998-5389499999931587-----0-699999--9999991899975574143468651
Q 002601 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----H-DVALKE--IQNLIASDQHPNIVRWYGVESDQDF 541 (902)
Q Consensus 471 i~~~~~~~~~LG~GsfGtVy~a~-~~~g~~VAVKrL~~~~-----~-~~~~~E--i~~ll~~l~HpNIVrL~g~~~d~~~ 541 (902)
.-++|.+.+.||+|+||+||++. ..+|+.||||++.+.. . .....| +..++...+|||||++++++.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred CHHHEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCE
T ss_conf 56892888898316483999999999998999999757882525568999999999999964899987179999998998
Q ss_pred EEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 26552134688124798835985677433102561148897640234343024777751799989999999962012342
Q 002601 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSH 621 (902)
Q Consensus 542 lyLV~E~c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~y 621 (902)
+||||| |+.+|+|..+|.. .+.+++..++.|+.||+.||+|
T Consensus 267 lylVmE----------y~~GGdL~~~l~~-----------------------------~~~l~E~~a~~y~~qIl~aL~y 307 (689)
T 3v5w_A 267 LSFILD----------LMNGGDLHYHLSQ-----------------------------HGVFSEADMRFYAAEIILGLEH 307 (689)
T ss_dssp EEEEEC----------CCCSCBHHHHHHH-----------------------------HCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEE----------CCCCCCHHHHHHH-----------------------------CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 899994----------6899829999986-----------------------------6999999999999999999999
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC-CCCCCCCHHHHHHHH
Q ss_conf 1103621344456116853699923888147862012487765534645889865457011002-999985214656799
Q 002601 622 LHEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQ-GRQTRAIDLFSLGCI 700 (902)
Q Consensus 622 LHs~~IiHrDLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~t~ksDVwSlGvI 700 (902)
||+++|+||||||+||||+.+++ +||+|||+|+.+... ...+.+||+.|||||++.. ..|+.++|+||+||+
T Consensus 308 LH~~gIiHRDLKPeNILld~~G~--vKL~DFGlA~~~~~~-----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvi 380 (689)
T 3v5w_A 308 MHNRFVVYRDLKPANILLDEHGH--VRISDLGLACDFSKK-----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 380 (689)
T ss_dssp HHTTTEECCCCSGGGEEECTTSC--EEECCCTTCEECSSC-----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHH
T ss_pred HHHCCCCCCCCCHHHEEEECCCC--EEECCCCEEEECCCC-----CCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 99788541688668759808998--896456556663789-----87776578673188998479999959999999999
Q ss_pred HHHHHHCCCCCCCCCHH----HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC-----HHHHHCCCCCCCCCHH
Q ss_conf 99999389999998356----67889741133322369957999998005999999969-----8889729777783001
Q 002601 701 LFFCITGGKHPYGESFE----RDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK-----AQNVLNHPFFWTADTR 771 (902)
Q Consensus 701 L~elltG~~~Pf~~~~~----~~~~i~~~~~~~~~~~~~~e~~dLI~~lL~~dP~~Rpt-----~~elL~HPfF~~~~~~ 771 (902)
+|||++| .+||..... .....+......++...++++++||.+||+.||.+|++ ++++++||||.+.++.
T Consensus 381 lYEmLtG-~~PF~~~~~~~~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~ 459 (689)
T 3v5w_A 381 LFKLLRG-HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQ 459 (689)
T ss_dssp HHHHHHS-SCTTCGGGCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHH
T ss_pred HHHHHHC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCHH
T ss_conf 9999868-799999986779999985057988887669999999999976089868799988899999669150478988
No 9
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=401.24 Aligned_cols=253 Identities=26% Similarity=0.361 Sum_probs=207.3
Q ss_pred CCEEEEEEEECCCCCEEEEEEEE----ECCCEEEEEEECCCC-----CHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCE
Q ss_conf 52299946644039659999985----389499999931587-----069999999999918999755741434686512
Q 002601 472 GKLVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (902)
Q Consensus 472 ~~~~~~~~~LG~GsfGtVy~a~~----~~g~~VAVKrL~~~~-----~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~l 542 (902)
..+|.+.+.||+|+||+||+|.. .+++.||||++.+.. .....+|+. ++..++|||||++++++.+++.+
T Consensus 23 p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~-il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD-ILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------C-CCCCCCCTTEECEEEEEEETTEE
T ss_pred CCCCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHHHHHHHHHHHH-HHHHCCCCCCCEEEEEEEECCEE
T ss_conf 55658988972188839999998558878979999998157768478999999999-99877997999099999989999
Q ss_pred EEEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 65521346881247988359856774331025611488976402343430247777517999899999999620123421
Q 002601 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHL 622 (902)
Q Consensus 543 yLV~E~c~~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yL 622 (902)
|+||| |+.+|+|.+++. +.+.+++..+..++.|++.||+||
T Consensus 102 ~ivmE----------y~~gg~L~~~l~-----------------------------~~~~l~e~~~~~~~~qi~~aL~yl 142 (304)
T 3ubd_A 102 YLILD----------FLRGGDLFTRLS-----------------------------KEVMFTEEDVKFYLAELALALDHL 142 (304)
T ss_dssp EEEEC----------CCTTCEEHHHHH-----------------------------HHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEE----------CCCCCCHHHHHH-----------------------------HCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99997----------579988899997-----------------------------559999999999999999999999
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHH
Q ss_conf 10362134445611685369992388814786201248776553464588986545701100299998521465679999
Q 002601 623 HEIGLIHRDLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCLTQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILF 702 (902)
Q Consensus 623 Hs~~IiHrDLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvIL~ 702 (902)
|+++|+||||||+|||++.++. +||+|||+|+...... ....+.+||+.|||||++.+..|+.++||||+||++|
T Consensus 143 H~~~IiHRDlKp~NILl~~~g~--vKl~DFGla~~~~~~~---~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 217 (304)
T 3ubd_A 143 HSLGIIYRDLKPENILLDEEGH--IKLTDFGLSKESIDHE---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217 (304)
T ss_dssp HHTTCCCSSCCGGGEEECTTSC--EEEESSEEEEC--------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCHHHEEECCCCC--EEECCCCCCEECCCCC---CCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHH
T ss_conf 9779958888789957868998--8762366343326887---6304544181507999965688787776361199999
Q ss_pred HHHHCCCCCCCCC-HHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC-----HHHHHCCCCCCCCCH
Q ss_conf 9993899999983-5667889741133322369957999998005999999969-----888972977778300
Q 002601 703 FCITGGKHPYGES-FERDANIVKDRKDLFLVEHIPEAVDLFTRLLDPNPDLRPK-----AQNVLNHPFFWTADT 770 (902)
Q Consensus 703 elltG~~~Pf~~~-~~~~~~i~~~~~~~~~~~~~~e~~dLI~~lL~~dP~~Rpt-----~~elL~HPfF~~~~~ 770 (902)
||++| .+||... .......+......++...++++.+||.+||+.||.+||| ++|+++||||.+.++
T Consensus 218 emltG-~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw 290 (304)
T 3ubd_A 218 EMLTG-TLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW 290 (304)
T ss_dssp HHHHS-SCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred HHHHC-CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCCCCCCCCH
T ss_conf 99859-89989849999999997189999876899999999998646987879998678999976904037899
No 10
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=400.49 Aligned_cols=252 Identities=24% Similarity=0.316 Sum_probs=202.5
Q ss_pred CCEEEEEEEECCCCCEEEEEEE-EECCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCC
Q ss_conf 5229994664403965999998-538949999993158706999999999991899975574143468651265521346
Q 002601 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (902)
Q Consensus 472 ~~~~~~~~~LG~GsfGtVy~a~-~~~g~~VAVKrL~~~~~~~~~~Ei~~ll~~l~HpNIVrL~g~~~d~~~lyLV~E~c~ 550 (902)
...|.+.++||+|+||+||++. ..+|+.||||++..... ..+|+. +++.++|||||++++++.+++.+|||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--~~~E~~-il~~l~HpnIV~l~~~~~~~~~~~ivmE--- 130 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--RVEELV-ACAGLSSPRIVPLYGAVREGPWVNIFME--- 130 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CTHHHH-TTTTCCCTTBCCEEEEEEETTEEEEEEC---
T ss_pred HHHEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH--HHHHHH-HHHHCCCCCCCCEEEEEEECCEEEEEEE---
T ss_conf 3351768685138780999999889998999999788886--999999-9985799899939999998999999996---
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 88124798835985677433102561148897640234343024777751799989999999962012342110362134
Q 002601 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVTRDIVSGLSHLHEIGLIHR 630 (902)
Q Consensus 551 ~sL~dliy~~~GsL~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~I~~qIa~gL~yLHs~~IiHr 630 (902)
|+++|+|.+++.. .+.+++..++.|+.||+.||+|||+++|+||
T Consensus 131 -------y~~gg~L~~~l~~-----------------------------~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHR 174 (336)
T 4g3f_A 131 -------LLEGGSLGQLIKQ-----------------------------MGCLPEDRALYYLGQALEGLEYLHTRRILHG 174 (336)
T ss_dssp -------CCTTCBHHHHHHH-----------------------------HSSCCHHHHHHHHHHHHHHHHHHHTTTEECS
T ss_pred -------CCCCCCHHHHHHH-----------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEEC
T ss_conf -------6599869999987-----------------------------6999999999999999999999998890426
Q ss_pred CCCCCEEEECCCCCCEEEECCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 44561168536999238881478620124877655--3464588986545701100299998521465679999999389
Q 002601 631 DLKPQNVLISKDKSFCAKLSDMGISKRLQGDMSCL--TQNATGYGSSGWQAPEQLLQGRQTRAIDLFSLGCILFFCITGG 708 (902)
Q Consensus 631 DLKp~NILL~~d~~~~vKLsDFGla~~~~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~t~ksDVwSlGvIL~elltG~ 708 (902)
||||+||||+.++. .+||+|||+|+.+....... ......+||+.|||||++.+..|+.++|||||||++|||++|
T Consensus 175 DlKp~NILl~~~g~-~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG- 252 (336)
T 4g3f_A 175 DVKADNVLLSSDGS-RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG- 252 (336)
T ss_dssp CCCGGGEEECTTSC-CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS-
T ss_pred CCCHHHEEEECCCC-EEEEEECCCCEECCCCCCCCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHC-
T ss_conf 16778879958999-7999627877685678765402217854558020089998899989089999999999999978-
Q ss_pred CCCCCCCHHH-H-HHHHHHCC--CCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHH-------------HCCCCCCC
Q ss_conf 9999983566-7-88974113--33223699579999980059999999698889-------------72977778
Q 002601 709 KHPYGESFER-D-ANIVKDRK--DLFLVEHIPEAVDLFTRLLDPNPDLRPKAQNV-------------LNHPFFWT 767 (902)
Q Consensus 709 ~~Pf~~~~~~-~-~~i~~~~~--~~~~~~~~~e~~dLI~~lL~~dP~~Rpt~~el-------------L~HPfF~~ 767 (902)
.+||.+.... . ..+..... ...+...++++.++|.+||+.||.+|||+.|+ ++|||+..
T Consensus 253 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~ 328 (336)
T 4g3f_A 253 CHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE 328 (336)
T ss_dssp SCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 6998998999999999808998002586679999999999762897689599999999999975443216987677
Done!