Your job contains 1 sequence.
>002602
MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ
LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL
ISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNR
LGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSS
SQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS
IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT
CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS
AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS
NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV
FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN
GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN
FRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIP
RNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKI
SASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLR
AQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQARPGSALGI
ET
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002602
(902 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 2158 1.5e-223 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 1939 2.3e-216 2
TAIR|locus:2025277 - symbol:PRAF1 "AT1G76950" species:370... 1891 4.6e-209 2
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 1632 6.9e-206 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 1483 3.2e-194 3
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 1179 9.1e-154 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 500 3.5e-47 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 498 2.4e-43 1
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 498 2.4e-43 1
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 499 9.6e-42 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 499 9.8e-42 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 499 1.9e-41 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 499 1.9e-41 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 498 2.5e-41 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 497 4.0e-41 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 497 4.2e-41 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 495 5.5e-41 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 487 5.4e-40 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 494 1.3e-39 3
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 489 1.1e-38 3
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 438 9.2e-38 1
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 438 9.4e-38 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 437 1.2e-37 1
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 435 2.0e-37 1
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 435 2.0e-37 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 475 2.3e-37 3
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 476 3.1e-37 3
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 476 3.1e-37 3
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 475 4.1e-37 3
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 406 5.9e-37 1
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 430 7.1e-37 1
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 476 1.2e-36 4
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 426 1.9e-36 1
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 425 3.2e-36 1
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 420 8.7e-36 1
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 391 2.5e-35 1
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 414 2.8e-35 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 415 3.1e-35 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 410 1.1e-34 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 409 1.4e-34 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 401 1.0e-33 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 412 1.2e-33 2
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 405 7.0e-33 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 390 1.5e-32 2
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 388 2.6e-32 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 387 3.2e-32 1
FB|FBgn0035207 - symbol:CG9153 species:7227 "Drosophila m... 382 1.2e-31 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 376 5.4e-31 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 372 1.5e-30 2
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 355 2.4e-30 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 350 4.9e-29 1
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 368 5.9e-29 2
UNIPROTKB|F1PBB3 - symbol:HERC6 "Uncharacterized protein"... 357 6.1e-29 1
UNIPROTKB|O95199 - symbol:RCBTB2 "RCC1 and BTB domain-con... 349 6.3e-29 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 361 8.9e-29 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 330 9.1e-29 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 329 1.2e-28 1
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 337 1.0e-27 1
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 355 1.0e-27 2
TAIR|locus:2090136 - symbol:AT3G15430 "AT3G15430" species... 331 2.8e-27 1
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 338 6.3e-27 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 330 6.7e-27 1
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 331 1.8e-26 1
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 326 2.2e-26 1
RGD|1306897 - symbol:Nek8 "NIMA-related kinase 8" species... 330 2.3e-26 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 333 2.5e-26 1
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 325 2.8e-26 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 324 3.7e-26 1
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 328 3.8e-26 1
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 328 3.8e-26 1
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 330 5.3e-26 1
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 319 5.3e-26 1
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 326 6.1e-26 1
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 325 7.8e-26 1
MGI|MGI:1344037 - symbol:Rpgr "retinitis pigmentosa GTPas... 328 8.0e-26 2
UNIPROTKB|Q9N1T2 - symbol:RPGR "X-linked retinitis pigmen... 333 2.0e-25 2
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 320 2.9e-25 1
ZFIN|ZDB-GENE-020509-1 - symbol:nek8 "NIMA (never in mito... 317 6.1e-25 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 312 8.5e-25 1
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 318 9.9e-25 1
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 330 1.5e-24 2
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 316 1.6e-24 1
RGD|1310372 - symbol:Als2 "amyotrophic lateral sclerosis ... 186 5.9e-24 2
UNIPROTKB|E1BKF7 - symbol:RCBTB1 "Uncharacterized protein... 304 6.7e-24 1
UNIPROTKB|E2R5W9 - symbol:RCCD1 "Uncharacterized protein"... 202 8.2e-24 2
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 304 8.3e-24 1
UNIPROTKB|F1PV11 - symbol:RCBTB1 "Uncharacterized protein... 303 8.7e-24 1
WB|WBGene00021685 - symbol:herc-1 species:6239 "Caenorhab... 189 1.5e-23 2
UNIPROTKB|Q9BL11 - symbol:herc-1 "Protein HERC-1" species... 189 1.5e-23 2
UNIPROTKB|Q8NDN9 - symbol:RCBTB1 "RCC1 and BTB domain-con... 299 2.4e-23 1
MGI|MGI:1921268 - symbol:Als2 "amyotrophic lateral sclero... 189 3.1e-23 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 282 3.9e-23 1
UNIPROTKB|Q96Q42 - symbol:ALS2 "Alsin" species:9606 "Homo... 186 1.1e-22 2
UNIPROTKB|Q5BIW4 - symbol:ALS2 "Alsin" species:9598 "Pan ... 185 1.4e-22 2
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 199 1.7e-22 2
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 312 1.9e-22 2
UNIPROTKB|F1SI31 - symbol:ALS2 "Uncharacterized protein" ... 183 2.2e-22 2
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 296 2.4e-22 1
UNIPROTKB|G3V1B4 - symbol:SERGEF "Secretion-regulating gu... 270 2.5e-22 1
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 284 2.9e-22 1
WARNING: Descriptions of 131 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 2158 (764.7 bits), Expect = 1.5e-223, P = 1.5e-223
Identities = 418/823 (50%), Positives = 558/823 (67%)
Query: 10 VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
VERD EQA+ LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++G EEK LKLSHVSRI
Sbjct: 17 VERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHLKLSHVSRI 76
Query: 70 IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALIS---EDNR 126
I GQRT +FQRYP+PEKEYQSFSLIY RSLD+ICKDKDEAE+WFT L+ALIS + NR
Sbjct: 77 ISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALISHCHQRNR 136
Query: 127 ---CKXXXXXXXXXXXXXHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
+ +T+++SP H S+D KD + I +E+ P+N L K
Sbjct: 137 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDK 196
Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADXXXXXXXXXXXXXX 241
AFS++ + K + ++S + S++ SGG D + R D
Sbjct: 197 AFSDMALYAVPPKGFYPSDSATISVH---SGGSDSMHGHMRGMGMDAFRVSMSSAVSSSS 253
Query: 242 XXXCHEDFDGLGDVFIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDAQSI 301
H+D D LGDVFIW S + D+LLPK LEST+VLD Q+I
Sbjct: 254 HGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNI 313
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
ACG +HAVLVTKQG+ FSWGE S G+LGHGV++++ PKLIDALN +NI +VACGEFH+C
Sbjct: 314 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSC 373
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
AVTLSGDLYTWG G + G+LG +E+SHW+P++V+ +EG+ +SSI CGP+HTA +TSA
Sbjct: 374 AVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 431
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G+LFTFGDGTFG LGHGD+ S +PREV++LK L+TV A+CGVWHTAA+VEV +S S+
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 491
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
SS KLFTWGDG +G+LGHG+ EP++VP CV + +FC+VACGHS+T+ALT +G V+
Sbjct: 492 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 551
Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
+MGS YGQLG+ + GK P R+EG + ++E+IACG+YH+AV++S++EVYTWGKG+NG
Sbjct: 552 TMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 611
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCXXXXXX 661
+LGHGD +++ +PTLVE+L+DKQVKS+ CG+NFTAA+C+H+ S D S+CSGC
Sbjct: 612 RLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSF 671
Query: 662 XXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
HNCYNCGLV+C C+SKKS+K +AP NKPYRVCD CF KL T E+ S+S +
Sbjct: 672 KRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSL 731
Query: 720 PRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNK 779
R S + Q + + + +SRS DGQ + + ++ + + +F S++
Sbjct: 732 SRRGS-INQGSDPIDKDDKFDSRS--DGQLA-RFSLMESMRQVDSRHKKNKKYEF-NSSR 786
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFT-DLANSEVI 821
+S P GS + R I++ +P + F+ + S ++
Sbjct: 787 VSPIPSGSSQ--RGALNIAKSFNPVFGASKKFFSASVPGSRIV 827
Score = 257 (95.5 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 72/187 (38%), Positives = 104/187 (55%)
Query: 712 ESGSNSQIPRNSSGLFQNCKRVTEKENMNSR---SATDGQSKPKGKSYHASPSLNGKFQW 768
+S S+ Q+ R S L ++ ++V + N + +++ P G S + ++ F
Sbjct: 751 DSRSDGQLARFS--LMESMRQVDSRHKKNKKYEFNSSRVSPIPSGSSQRGALNIAKSF-- 806
Query: 769 EPNSDFIKSNKI-SASPPGSRRVSRAPSPISRKSSPACSITMN-SFTDLANSEVIFEYSK 826
N F S K SAS PGSR VSRA SPISR+ SP S T + + LA + + + +K
Sbjct: 807 --NPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTLSGLATPKFVVDDTK 864
Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIXXXXXXXXXXXXXVIR 886
+TNDN +QE LR+Q+E LTRK+Q EVELERT+++LKE I VI+
Sbjct: 865 RTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAITNEETTRCKAAKEVIK 924
Query: 887 SLTAQAR 893
SLTAQ +
Sbjct: 925 SLTAQLK 931
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 1939 (687.6 bits), Expect = 2.3e-216, Sum P(2) = 2.3e-216
Identities = 406/807 (50%), Positives = 517/807 (64%)
Query: 6 QNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSH 65
+++ +R+ EQA+ +LKKG YLLKYGRRGKPKF PFRLSSDE L+WY GK+EK+LKLS
Sbjct: 9 RSVPTDRENEQAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKRLKLSS 68
Query: 66 VSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN 125
V+RIIPGQRTAVF+RYPQP KEYQSFSLIY RSLDL DKDEAE W T LRAL+S +N
Sbjct: 69 VTRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNN 125
Query: 126 RCKXXXXXXXXXXXXXH-----TQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNR 180
+ + +NS S++ S+SSD + ++ + ++ N+PQ R
Sbjct: 126 SSALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVSSDTSYEEHA--KKASGSHCNTPQ-R 182
Query: 181 LGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDD--ANSRSSTADXXXXXXXXXXX 238
LGK FSEVLS TA KA + E V K + +++ N S D
Sbjct: 183 LGKVFSEVLSQTAVLKALSLDELVHKP-HTSPPETIENRPTNHSSPGVDTSKYSISSAVS 241
Query: 239 XXXXXXCHEDFDGLGDVFIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDA 298
ED L DVF+W SS+ D+ LPKVL+S V LDA
Sbjct: 242 SSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDA 301
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
QSI+CG+ +AVLVTKQGQ++SWGE SGG+LGHGV + V +PKLID NGS + + CGEF
Sbjct: 302 QSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEF 361
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
HTCAVT SGDLY WGDG HN GLLG S SHW P ++ GQMEG+ + +I CGPWHTA +
Sbjct: 362 HTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFV 421
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
TS GKLFTFGDGTFGALGHGDR ST++PREVE L +T+ A+CGVWH+AA+V V G+ +
Sbjct: 422 TSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEAT 481
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
SS KLFTWGDG +G+LGHGD E R++P CV D SF +VACG SIT+AL+ +G
Sbjct: 482 -----SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSG 536
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
QV++MG+AD + P+ IEG + +++++ACG +HIAV++SK+EVYTWGKG
Sbjct: 537 QVYAMGTADPSH-----DIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKG 591
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCXXX 658
+NGQLGHGD E + PTLV+AL+ KQV+ VVCGSN+TA ICLHK ++ D + CSGC
Sbjct: 592 SNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHP 651
Query: 659 XXXXXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ 718
HNCYNCG V+C C+SKKS+ A+AP+ N+PYRVCDDC+IKL ES +
Sbjct: 652 FNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLAT-- 709
Query: 719 IPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSY-------HASPSLNGKFQWEPN 771
P NS+ F N + E M+ T + + S+ HA G+
Sbjct: 710 -PANSAR-FSNASLPSSYE-MDEIGITPQRQLLRVDSFDFFRQTKHADLKTIGETSGGSC 766
Query: 772 SDFIKSN---KISASPPGSRRVSRAPS 795
+ I SN K S + G RR+SR S
Sbjct: 767 TSSIHSNMDIKGSFNLKGIRRLSRLTS 793
Score = 174 (66.3 bits), Expect = 2.3e-216, Sum P(2) = 2.3e-216
Identities = 60/189 (31%), Positives = 91/189 (48%)
Query: 707 LNTTSESGSNSQIPRNSS--GLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNG 764
+ TS S I N G F N K + + S + + K + K + AS S
Sbjct: 758 IGETSGGSCTSSIHSNMDIKGSF-NLKGIRRLSRLTSFDSVQEEGKQRTK-HCASKS--- 812
Query: 765 KFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSI-TMNSFT-DLANSEVIF 822
S I+ + ++ P SRR S P+S KSSP S+ T + FT D+ + E++
Sbjct: 813 -----DTSSLIR-HSVTCGLPFSRRGSVELFPLSIKSSPVESVATTSDFTTDITDHELLQ 866
Query: 823 EYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIXXXXXXXXXXXX 882
E K++N + E VL+AQ+E+LT KS+ LE EL +TS+KL+ +
Sbjct: 867 EVPKKSNQCLSHEISVLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSE 926
Query: 883 XVIRSLTAQ 891
++RSLT Q
Sbjct: 927 EIVRSLTLQ 935
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 1891 (670.7 bits), Expect = 4.6e-209, Sum P(2) = 4.6e-209
Identities = 394/881 (44%), Positives = 538/881 (61%)
Query: 11 ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
+ + EQA+ LKKGT LLKYGR+GKPKF PFRLSSDEK LIW + EK+LKL+ VS+I+
Sbjct: 11 DHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKRLKLASVSKIV 70
Query: 71 PGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRALISEDNRCK 128
PGQRTAVFQRY +PEK+Y SFSL+Y + +SLDLICKDK EAE+W L+ LIS +
Sbjct: 71 PGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTGQGGR 130
Query: 129 XXXXXXXXXXXXXHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
+ S SS SS + G + P G F+ +
Sbjct: 131 SKIDGWSGGGLSVDASRELTS--SSPSSSSASASRGHSSP-------------GTPFN-I 174
Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRS--STADXXXXXXXXXXXXXXXXXCH 246
T+ A + VA LD+ N ++ S +D
Sbjct: 175 DPITSPKSAEPEVPPTDSEKSHVA---LDNKNMQTKVSGSDGFRVSVSSAQSSSSHGSAA 231
Query: 247 EDFDGLGDVFIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDAQSIACGSK 306
+D D LGDV+IW R D L+PK LES +VLD IACG +
Sbjct: 232 DDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQIACGVR 291
Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVACGEFHTCAVTL 365
HA VT+QG+IF+WGE SGG+LGHG+ DV +P+L+++L S++ VACGEFHTCAVTL
Sbjct: 292 HAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHTCAVTL 351
Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
+G+LYTWGDG HN+GLLG S+ISHWIP++++G +EGL ++S+ CGPWHTA ITS G+LF
Sbjct: 352 AGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTALITSYGRLF 411
Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
TFGDGTFG LGHGD+ + PREVE+L L+T+ SCGVWHTAA+VE+ S S+ +SS
Sbjct: 412 TFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNSSSVSS 471
Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
KLFTWGDG + +LGHGD +PR+ P CV D +F K+ACGHS+T+ LT +GQVF+MGS
Sbjct: 472 GKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQVFTMGS 531
Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
YGQLG+ + GK P +E + ++E+I+CG+YH+A ++S++EVYTWGKGANG+LGH
Sbjct: 532 TVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGH 591
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCXXXXXXXXXX 665
GD E+++ PT+VEAL+D+ VK + CGSN+TAAICLHK VS A+ S CS C
Sbjct: 592 GDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRKR 651
Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGS----NSQIPR 721
HNCYNCGLV+C CSSKK+ + ALAP + YRVCD C++KL+ SE NS +PR
Sbjct: 652 HNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEINDTNRRNSAVPR 711
Query: 722 ----NSSGLFQNCKRVTE--KENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPN---- 771
N L ++ R+ + NM+ D ++ +GK SL G+ P+
Sbjct: 712 LSGENRDRLDKSEIRLAKFGTSNMDLIKQLDSKAAKQGKKTDTF-SL-GRNSQLPSLLQL 769
Query: 772 SDFIKSNKISASPPGSRRVSRAPSPISRKS-SPAC--SITMNSFTDLANSEVIFEYSKQT 828
D ++SN I + ++++APS IS +S SP S S T + ++ ++ +
Sbjct: 770 KDAVQSN-IGDMRRATPKLAQAPSGISSRSVSPFSRRSSPPRSATPMPSTSGLY-FPVGI 827
Query: 829 NDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQ 869
DN + ++L ++ L + L + E +L+ + +
Sbjct: 828 ADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNSVK 868
Score = 153 (58.9 bits), Expect = 4.6e-209, Sum P(2) = 4.6e-209
Identities = 42/116 (36%), Positives = 62/116 (53%)
Query: 779 KISASPPGSRRVSRAPSPISRKSSPACSIT-MNSFTDLANSEVIFEYSKQTNDNFNQEPD 837
K++ +P G SR+ SP SR+SSP S T M S + L I + K+TN+ NQE
Sbjct: 786 KLAQAPSGIS--SRSVSPFSRRSSPPRSATPMPSTSGLYFPVGIADNMKKTNEILNQEIV 843
Query: 838 VLRAQLEDLTRKSQFLEVELERTSRKLKETTQIXXXXXXXXXXXXXVIRSLTAQAR 893
LR Q++ LT+K +F EVEL+ + +K +E + I+SL AQ +
Sbjct: 844 KLRTQVDSLTQKCEFQEVELQNSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLK 899
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 1632 (579.6 bits), Expect = 6.9e-206, Sum P(2) = 6.9e-206
Identities = 333/719 (46%), Positives = 447/719 (62%)
Query: 199 TRAE-SVSKSLNFVASGGLDDANS--RSSTADXXXXXXXXXXXXXXXXXCHEDFDGLGDV 255
+R E SVS + VAS D N R + +D +D D LGDV
Sbjct: 175 SRTENSVSSERSHVAS---DSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAPDDCDALGDV 231
Query: 256 FIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
+IW R D L+PK LES VVLD IACG KHA LV++QG
Sbjct: 232 YIWGEVLCENVTKFGADKNIGYLGSRSDVLIPKPLESNVVLDVHHIACGVKHAALVSRQG 291
Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
++F+WGE SGG+LGHG+ DV+ P+LI++L ++I VACGEFHTCAVT++G++YTWGDG
Sbjct: 292 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMTGEIYTWGDG 351
Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
HN GLLG +++SHWIP+++SG +EGLQI+S+ CGPWHTA ITS G+LFTFGDGTFG L
Sbjct: 352 THNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFGDGTFGVL 411
Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
GHGD+ + PREVE+L L+T+ +CGVWH AAIVEV T S+ +SS KLFTWGDG
Sbjct: 412 GHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVI-VTHSSSSVSSGKLFTWGDGD 470
Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
+ +LGHGD EPR+ P CV D +F +VACGHS+T+ LT +G+V++MGS YGQLG+P
Sbjct: 471 KSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGSTVYGQLGNPN 530
Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
+ GK P +E + +E+IACG+YH+AV++S++EV+TWGKGANG+LGHGD E+++ PT
Sbjct: 531 ADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPT 590
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCXXXXXXXXXXHNCYNCGLVY 675
LV+AL+++ VK++ CGSNFTAAICLHK VS + S CS C HNCYNCGLV+
Sbjct: 591 LVDALKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRHNCYNCGLVH 650
Query: 676 CKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---IPR----NSSGLFQ 728
C CSSKKS+K ALAP KPYRVCD C KL+ SE+ +S+ +PR N L +
Sbjct: 651 CHSCSSKKSLKAALAPNPGKPYRVCDSCHSKLSKVSEANIDSRKNVMPRLSGENKDRLDK 710
Query: 729 NCKRVTEK---ENMNSRSATDGQSKPKGKSYHA-SPSLNGKFQWEPNSDFIKS-NKISAS 783
R+ + N++ D ++ +GK S + D + + +
Sbjct: 711 TEIRLAKSGIPSNIDLIKQLDNRAARQGKKADTFSLVRTSQTPLTQLKDALTNVADLRRG 770
Query: 784 PPG---SRRVSRAPSPISRKSSPACSITMNSFT-DLANSEVIFEYSKQTNDNFNQEPDVL 839
PP + SR SP SR+SSP S+T L S I E K+TN+ NQE L
Sbjct: 771 PPKPAVTPSSSRPVSPFSRRSSPPRSVTPIPLNVGLGFSTSIAESLKKTNELLNQEVVRL 830
Query: 840 RAQLEDLTRKSQFLEVELERTSRKLKETTQIXXXXXXXXXXXXXVIRSLTAQARPGSAL 898
RAQ E L + + E E++++ +K++E + VI+SLTAQ + +AL
Sbjct: 831 RAQAESLRHRCEVQEFEVQKSVKKVQEAMSLAAEESAKSEAAKEVIKSLTAQVKDIAAL 889
Score = 382 (139.5 bits), Expect = 6.9e-206, Sum P(2) = 6.9e-206
Identities = 75/109 (68%), Positives = 89/109 (81%)
Query: 16 QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
QA+ LKKG LLKYGR+GKPKFCPFRLS+DE LIW + EK+LKL+ VS+I+PGQRT
Sbjct: 11 QALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLATVSKIVPGQRT 70
Query: 76 AVFQRYPQPEKEYQSFSLIYRNR--SLDLICKDKDEAELWFTALRALIS 122
AVFQRY +P+K+Y SFSLIY NR +LDLICKDK EAE+W L+ALIS
Sbjct: 71 AVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALIS 119
Score = 37 (18.1 bits), Expect = 2.1e-169, Sum P(2) = 2.1e-169
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 183 KAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSST 225
K +EV + A KA ++ ++ + GGL A+SR T
Sbjct: 104 KVEAEV--WIAGLKALISGQAGRSKIDGWSDGGLSIADSRDLT 144
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 1483 (527.1 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 264/476 (55%), Positives = 348/476 (73%)
Query: 247 EDFDGLGDVFIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDAQSIACGSK 306
+D + LGDV++W + + D L P+ LES VVLD I CG +
Sbjct: 205 DDIESLGDVYVWGEVWTEGILPDGTAS---NETVKTDVLTPRPLESNVVLDVHQIVCGVR 261
Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
H LVT+QG++F+WGE GG+LGHG++ D+S PKL++ L +NI VACGE+HTC V+ S
Sbjct: 262 HVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTS 321
Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
GDL++WGDGIHN+GLLG S+ISHWIP++VSG +EGLQ+ S+ CG WH+A T+ GKLFT
Sbjct: 322 GDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFT 381
Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
FGDG FG LGHG+R S S P+EV++L LKTV +C +WHTAAIVEV G+T+ S +SS+
Sbjct: 382 FGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATS--MSSR 439
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
KLFTWGDG + +LGHG+ E ++P CV D +F K+ACGH+ T+ALT +G VF+MG
Sbjct: 440 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGT 499
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
+GQLG+ S GK P ++ + ++E+IACG++H+AV++S+SEV+TWGKGANG+LGHG
Sbjct: 500 AHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHG 559
Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCXXXXXXXXXXH 666
D E+K+TPTLVEALRD+ VKS+ CGSNFT++IC+HK VS AD SICSGC H
Sbjct: 560 DTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKRH 619
Query: 667 NCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRN 722
NCYNCGLV+C CSSKK++K ALAP KP+RVCD C+ KL +ESG +S + RN
Sbjct: 620 NCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKLKA-AESGYSSNVNRN 674
Score = 358 (131.1 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 76/119 (63%), Positives = 90/119 (75%)
Query: 11 ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
ERD +QA+ VLKKGT LLKY R+GKPKF FRLS DEK LIW++ EEK LKL VSRI+
Sbjct: 12 ERDVDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEKGLKLFEVSRIV 71
Query: 71 PGQRTAVFQRYPQPEKEYQSFSLIYRNR--SLDLICKDKDEAELWFTALRALISED-NR 126
PGQRT R+ +PEK++ SFSL+Y NR SLDLICKDK E E+WF AL+ LI + NR
Sbjct: 72 PGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAALKFLIEKSRNR 126
Score = 79 (32.9 bits), Expect = 3.2e-194, Sum P(3) = 3.2e-194
Identities = 44/227 (19%), Positives = 93/227 (40%)
Query: 676 CKLCSSK-KSMKTALAPEINK----PYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNC 730
C C SK K+ ++ + +N+ P R D ++ + + S + N + + +
Sbjct: 653 CDACYSKLKAAESGYSSNVNRNVATPGRSIDGS-VRTDRETTRSSKVLLSANKNSVMSSS 711
Query: 731 KRVTEKENMNSR-SATDGQSKPKGKSYHASPS-LNGKFQ--WEPNSDFIKSNKISASPPG 786
+ E+ N+R S + K ++ +S S + F+ P + ++ I S P
Sbjct: 712 RPGFTPESSNARASQVPSLQQLKDIAFPSSLSAIQNAFKPVVAPTTTPPRTLVIGPSSPS 771
Query: 787 SRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDL 846
R+ SP +R+ SP + + F S + + ++TN+ NQE L +Q
Sbjct: 772 PPPPPRSSSPYARRPSPPRT---SGF-----SRSVIDSLRKTNEVMNQEMTKLHSQ---- 819
Query: 847 TRKSQFLEVELERTSRKLKETTQIXXXXXXXXXXXXXVIRSLTAQAR 893
++ E+ER + K+ +++ ++S+ Q +
Sbjct: 820 -QRCNNQGTEIERFQKAAKDASELAARQSSKHKAATEALKSVAEQLK 865
Score = 69 (29.3 bits), Expect = 3.6e-193, Sum P(3) = 3.6e-193
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 683 KSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ-----IPRNSSGLFQNCKRVTEKE 737
K +K L PE+++ + F +N+ +E+ N+ P +SG Q + TE++
Sbjct: 865 KELKEKLPPEVSE-----SEAFESINSQAEAYLNANKVSETSPLTTSGQEQETYQKTEEQ 919
Query: 738 NMNSRSATDGQSKPKGKSYHASPS-LNGKF---QWEP 770
++ S T+ S + S AS S ++GK Q+EP
Sbjct: 920 VPSNSSITETSSSSRAPSTEASSSRISGKESKEQFEP 956
Score = 39 (18.8 bits), Expect = 8.5e-28, Sum P(2) = 8.5e-28
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 190 SFTAAAKAYTRAESVSKSLNFVASG 214
S + A+AY A VS++ SG
Sbjct: 883 SINSQAEAYLNANKVSETSPLTTSG 907
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 1179 (420.1 bits), Expect = 9.1e-154, Sum P(2) = 9.1e-154
Identities = 247/598 (41%), Positives = 366/598 (61%)
Query: 278 SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
S ++ DAL PK+LES + D QSI+ G+KHA LVT+QG++F WG G+ GKLG V D+
Sbjct: 274 SKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDID 333
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKV 396
+PK +++L + VAC + TCAVT SG+LY WG DG G + Q S ++ RK+
Sbjct: 334 HPKRVESLEDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQSG--SQFLTRKI 387
Query: 397 SGQMEG-LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
S + G L + S+ CG WHTA +TS+G+LFT+G GTFG LGHG S + P+EVE+L+ +
Sbjct: 388 SDVLGGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRM 447
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
K + SCG WHTAAIVE A N S KLFTWGDG +G+LGH D++ ++VP CV
Sbjct: 448 KVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTE 507
Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
D F KV+CG ++T+AL+ +G V++MGS+ +GQLG P + K + GN+ ++++D
Sbjct: 508 LIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKD 567
Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
IA GS+H+AV++S VYTWGKG NGQLG GD ++ +P LVE L D+ V+S+ CG N T
Sbjct: 568 IASGSHHVAVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLT 627
Query: 636 AAICLHKGVSIADHSICSGCXXXXXXXXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINK 695
AAICLHK +S+ D + CS C HNCYNCGL++C CSSKK++ +LAP +K
Sbjct: 628 AAICLHKEISLNDQTACSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKAVNASLAPNKSK 687
Query: 696 PYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKS 755
RVCD CF L + +E N ++ ++ + +RV+E + +S + Q+ P+
Sbjct: 688 LSRVCDSCFDHLWSITEFSRNVKMDNHTPRMQMVTRRVSE-DLTEKQSENEMQNLPQ--- 743
Query: 756 YHASPSLNGKFQWEPNS--DFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFT 813
A+ S +G+ +W S + +KIS S S +S +S + + + I+ +S +
Sbjct: 744 --ANRSSDGQPRWGQVSGPSLFRFDKISTS--SSLNLS-----VSARRTSSTKISTSSES 794
Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRK-SQFLEVELERTSRKLKETTQI 870
+ +E I E K N ++ ++ ++E+ ++ + EV E + K K +I
Sbjct: 795 NKILTEEI-ERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEE-AEKSKAAKEI 850
Score = 342 (125.4 bits), Expect = 9.1e-154, Sum P(2) = 9.1e-154
Identities = 71/132 (53%), Positives = 92/132 (69%)
Query: 1 MASFQQNILVERDT--EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEE 58
M Q ++ V RD EQA+ LKKG LLK RRG PKFCPF+LS DEK LIWY+G+EE
Sbjct: 1 MGEQQISVTVPRDRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEE 60
Query: 59 KQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTA 116
+QL+LS V I+ GQ T FQ+ Q +++ QSFSLIY N +LDLICKDK +A+ WF
Sbjct: 61 RQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKG 120
Query: 117 LRALISEDNRCK 128
LRA+I++ + +
Sbjct: 121 LRAVITKHHNIR 132
Score = 330 (121.2 bits), Expect = 1.2e-56, Sum P(2) = 1.2e-56
Identities = 103/340 (30%), Positives = 164/340 (48%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
I WG +G G + D PKL+++ ++ ++ G H VT G+++ WG+G
Sbjct: 261 IMIWGAITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNG- 319
Query: 377 HNLGLLG-QVS-EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG-DGTFG 433
N G LG +V+ +I H P++V +E + + S+ C T A+T +G+L+ +G DG G
Sbjct: 320 -NSGKLGLKVNIDIDH--PKRVES-LEDVAVRSVACSDHQTCAVTESGELYLWGIDG--G 373
Query: 434 ALGHGDRSSTSVPREV-ETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
+ S + R++ + L TV++ +CG WHTA + SS +LFT+
Sbjct: 374 TIEQS--GSQFLTRKISDVLGGSLTVLSVACGAWHTAIVT------------SSGQLFTY 419
Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTAT----------GQ 539
G G G LGHG E P V+ + V+CG H+ I TA G+
Sbjct: 420 GSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETANDRKFYNAKSCGK 479
Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+F+ G D G+LG S K PT + I H +I+ ++CG +S VYT G
Sbjct: 480 LFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIK-VSCGWTLTVALSISGTVYTMGSS 538
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+GQLG ++K ++ L + VK + GS+ A +
Sbjct: 539 IHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVL 578
Score = 136 (52.9 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
Identities = 42/144 (29%), Positives = 68/144 (47%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ AD + L+P + + D ++CG V ++ G +++ G G+LG D
Sbjct: 491 LGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKD 550
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPR 394
S ++ L + +A G H +T G++YTWG G++ LGL G V + + P
Sbjct: 551 KSVNVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWGKGMNGQLGL-GDVRDRNS--PV 607
Query: 395 KVSGQMEGLQISSICCGPWHTAAI 418
V + L + SI CG TAAI
Sbjct: 608 LVEPLGDRL-VESIACGLNLTAAI 630
Score = 46 (21.3 bits), Expect = 7.9e-27, Sum P(2) = 7.9e-27
Identities = 12/49 (24%), Positives = 23/49 (46%)
Query: 591 EVYTWGKGANGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAI 638
++ WG G + N+N +P L+E+ V+S+ G+ A +
Sbjct: 260 DIMIWG-AITGLIDGSKNQNDALSPKLLESATMFDVQSISLGAKHAALV 307
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 500 (181.1 bits), Expect = 3.5e-47, P = 3.5e-47
Identities = 113/347 (32%), Positives = 185/347 (53%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVEA 334
+ D D P L + S+ CG+ H V ++ G +++SWG G G+LGHG +
Sbjct: 47 LGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSS 106
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
D+ P I AL+G I +ACG+ H AVT+ G++ +WG N G LG +P+
Sbjct: 107 DLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRN-QN-GQLGLGDTEDSLVPQ 164
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
K+ EG++I + G HTAA+T G L+ +G G +G LG GDR+ VP V +
Sbjct: 165 KIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGG 223
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
K M +CG HT ++ SG+ L+T+G GQLGHGD E ++P ++
Sbjct: 224 EKMSMVACGWRHTISV-----SYSGA-------LYTYGWSKYGQLGHGDLEDHLIPHKLE 271
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYI 573
+ +++ G T+ALT+ G+++ G +GQ+G + + P ++ + +
Sbjct: 272 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVV 331
Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
+ ++CG H V+ ++ V+ WG+G NGQLG G++ ++ P ++EAL
Sbjct: 332 Q-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 450 (163.5 bits), Expect = 1.0e-41, P = 1.0e-41
Identities = 110/340 (32%), Positives = 174/340 (51%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+ G+ H+V + + SWG G G+LGHG D P + AL+G I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
A + SG ++Y+WG G + G LG + + P + + G++I I CG H A+T
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G++ ++G G LG GD + VP++++ + ++ M + G HTAA+ E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+G L+ WG G G LG GD R+VP V + VACG TI+++ +G
Sbjct: 190 -DG----DLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+++ G + YGQLG P ++E + + +I I+ G H ++S ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GQ+G G+N ++ +P V D++V V CG T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 339 (124.4 bits), Expect = 9.8e-30, P = 9.8e-30
Identities = 92/290 (31%), Positives = 141/290 (48%)
Query: 352 MVACGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
+++ G H+ A+ LSGD+ +WG G G LG P ++S ++G QI S+ C
Sbjct: 19 IISAGASHSVAL-LSGDIVCSWGRGED--GQLGHGDAEDRPSPTQLSA-LDGHQIVSVTC 74
Query: 411 GPWHTAAITSAG-KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
G HT A + +G +++++G G FG LGHG+ S P ++ L ++ +CG H A
Sbjct: 75 GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLA 134
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
+ + G+ +WG GQLG GD E +VP ++ + I VA G
Sbjct: 135 VT-MEGEVQ-----------SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAE 182
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
T A+T G ++ G YG LG T + P R+ + + +ACG H VS
Sbjct: 183 HTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHTISVSY 241
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+YT+G GQLGHGD E+ P +EAL + + + G T A+
Sbjct: 242 SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMAL 291
Score = 170 (64.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 38/119 (31%), Positives = 66/119 (55%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
++ G S ++AL + V S G + GQLG + + PT++ H+ + + CG+ H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS-VTCGADH 78
Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
+A S EVY+WG G G+LGHG++ + TP ++AL ++K + CG + A+ +
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Score = 125 (49.1 bits), Expect = 0.00022, P = 0.00022
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
++CG +H + VT++ +F+WG G+ G+LG G D ++PK+I+AL+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 498 (180.4 bits), Expect = 2.4e-43, P = 2.4e-43
Identities = 116/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G++++ GE + G+LG G+ + V P+ I A
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3102
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AAITS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3163 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3212
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGAL 3271
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3272 HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 475 (172.3 bits), Expect = 8.1e-41, P = 8.1e-41
Identities = 118/358 (32%), Positives = 181/358 (50%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3980 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 4039
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 4040 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 4096
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I G H+A IT+AG LFT+G G +G LGHGD P+ VE L+ + + +CG
Sbjct: 4097 EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + D+ K
Sbjct: 4157 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVK 4206
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4264
Query: 582 HIAVVSSKS--EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H + EVYTWG GQLG G Q P LV AL+ K++ V CGS T A
Sbjct: 4265 HCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4322
Score = 421 (153.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 115/343 (33%), Positives = 174/343 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G + A + + ++F WG +LG + + P + L+ N+ VA G
Sbjct: 2952 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3009
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAI 418
AVT+ G +Y G+ + LGL G +S + IPR+++ + + + G H A+
Sbjct: 3010 AVTVEGKVYACGEATNGRLGL-G-ISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHAMAL 3066
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T GK+F++G+G G LGH R + PR +E LK + +CG H+AAI
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------- 3119
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTA 536
SS +L+TWG G G+LGHGD ++ P VKV +VACG + T+ALT
Sbjct: 3120 -----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174
Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G VFS G D+G+LG GS G P IE + + + I CG+ ++ V+TW
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GKG +LGHG + + + P +VE LR K++ V G+ A+
Sbjct: 3234 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 413 (150.4 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 111/335 (33%), Positives = 169/335 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A I AG LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT-AAGD-----------LFTWG 4121
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGHGD+E ++ P V+ +ACG + T+ LT V+S G DYG+
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4182 LGRGGSDGCKVPMKID-SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
+ + P V+ L+ K+V ++ GS C G+
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGL 4274
Score = 404 (147.3 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 111/331 (33%), Positives = 165/331 (49%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++S + IA S H + ++ G++FSWG G GG+LGHG
Sbjct: 475 TQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTV 534
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PKLI AL+G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 535 PLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDQ 592
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 593 TIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 651
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L V CG + A+ + +G +++TWG G +LGHG E
Sbjct: 652 IEKLQDLDIVKVRCGSQFSIALTK--------DG----QVYTWGKGDNQRLGHGTEEHVR 699
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T P + G
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPG- 758
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 759 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 400 (145.9 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 102/318 (32%), Positives = 162/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D P+L+ +L NI +A H A++ +G++++WG G + G LG +
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLE 537
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 538 EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + SCG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 645
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG +IALT GQV++ G D +LG ++P +E
Sbjct: 646 CKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN--KQTPTLVEALRDK 623
G +K + + D+A GS H ++ SEV++WG +N Q H D K P + L K
Sbjct: 706 G-LKGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRITKPEPAALPGLDTK 762
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 763 HIVGIACGPAQSFAWSSC 780
Score = 384 (140.2 bits), Expect = 6.0e-31, P = 6.0e-31
Identities = 95/311 (30%), Positives = 156/311 (50%)
Query: 287 PKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
P +LES V + ++ G KH + ++ +G+++SWGE GKLGHG + P++I++
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L G + +A G H+ +T +GDL+TWG G + G LG P+ V ++G +
Sbjct: 4093 LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4149
Query: 405 ISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+ I CG T +T ++++GDG +G LG G VP ++++L +L V C
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVEC 4209
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + A+ + SG+ ++TWG G +LGHG + P V+
Sbjct: 4210 GSQFSVALTK-----SGA-------VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 523 KVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIACG 579
+A G H + G+V++ G D GQLG G+T R+ ++ + I +ACG
Sbjct: 4258 AIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGD-GTTNAIQRPRLVAALQGKKINRVACG 4316
Query: 580 SYH-IAVVSSK 589
S H +A +SK
Sbjct: 4317 SAHTLAWSTSK 4327
Score = 337 (123.7 bits), Expect = 7.1e-26, P = 7.1e-26
Identities = 78/251 (31%), Positives = 126/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3153
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3210
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGA 3270
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + +++ WGD GQ G+G P V+ + +V
Sbjct: 3271 LHCLAVTDTG------------QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3318
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3319 ACGSSHSVAWT 3329
Score = 272 (100.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 64/203 (31%), Positives = 105/203 (51%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG +++ P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGTDVHVRKP 3252
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T G+++ +GD G G+G + P V+ L+
Sbjct: 3253 QVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3311
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 3312 GQKITRVACGSSHSVAWTTVDVA 3334
Score = 271 (100.5 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 69/199 (34%), Positives = 98/199 (49%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D D L PK++E+ IACGS A + +T ++SWG+G GKLG G
Sbjct: 4128 LGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4187
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4188 DGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4244
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITS--AGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V
Sbjct: 4245 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4303
Query: 451 TLKELKTVMASCGVWHTAA 469
L+ K +CG HT A
Sbjct: 4304 ALQGKKINRVACGSAHTLA 4322
Score = 268 (99.4 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 4006
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 4007 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4055
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + DIA G H A +++
Sbjct: 4056 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAG 4115
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
+++TWGKG G+LGHGD+E++ P LVEAL+ +V + CGS +CL
Sbjct: 4116 DLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 260 (96.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 80/230 (34%), Positives = 109/230 (47%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L V + G A+ V G
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VEG 3015
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITI 532
K ++ G+ G+LG G + V +P + + KVA G +
Sbjct: 3016 K-----------VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064
Query: 533 ALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
ALT G++FS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3065 ALTVDGKIFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAAITSSG 3122
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
Score = 218 (81.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 59/193 (30%), Positives = 96/193 (49%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L IAC K +++++ G++++ S LG P+L+ +L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG---------PQLVQSLA 492
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A++ +G++++WG G + G LG + P+ +S G+
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKLISALSGKQA 550
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + S
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 611 CGSGDAQTLAVTE 623
Score = 213 (80.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 51/148 (34%), Positives = 80/148 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4192 VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4251
Query: 346 NGSNIHMVACGEFHTCAVTLSG--DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
G + +A G H T G ++YTWGD ++ G LG + + PR V+ ++G
Sbjct: 4252 QGKKVIAIATGSLHCVCCTEDGLGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGK 4308
Query: 404 QISSICCGPWHTAA-ITS----AGKLFT 426
+I+ + CG HT A TS AGKL T
Sbjct: 4309 KINRVACGSAHTLAWSTSKPANAGKLPT 4336
Score = 103 (41.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 42/149 (28%), Positives = 68/149 (45%)
Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
G +G A+VS P + L + +AC E ++ +G +YT LG
Sbjct: 430 GLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQ 489
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S S I K++ +G H A+++ G++F++G G G LGHGD
Sbjct: 490 SLASRNIV-KIAAHSDG----------HHYLALSANGEVFSWGCGDGGRLGHGDTVPLEE 538
Query: 446 PREVETL--KEL-KTVM-ASCGVWHTAAI 470
P+ + L K+ K V+ +CG ++AAI
Sbjct: 539 PKLISALSGKQAGKHVVHIACGSTYSAAI 567
Score = 85 (35.0 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4276 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS--------- 4326
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P + GK PT++ +++ ++++I
Sbjct: 4327 ------KPANAGKLPTQVP--MEYNHLQEI 4348
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 498 (180.4 bits), Expect = 2.4e-43, P = 2.4e-43
Identities = 116/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G++++ GE + G+LG G+ + V P+ I A
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3045
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 3046 LSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3102
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AAITS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3103 KRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3163 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3212
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3213 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEG-LRGKKIVHVAVGAL 3271
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3272 HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327
Score = 475 (172.3 bits), Expect = 8.1e-41, P = 8.1e-41
Identities = 118/358 (32%), Positives = 181/358 (50%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3980 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 4039
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 4040 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 4096
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I G H+A IT+AG LFT+G G +G LGHGD P+ VE L+ + + +CG
Sbjct: 4097 EVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG 4156
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + D+ K
Sbjct: 4157 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVK 4206
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4207 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4264
Query: 582 HIAVVSSKS--EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H + EVYTWG GQLG G Q P LV AL+ K++ V CGS T A
Sbjct: 4265 HCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4322
Score = 421 (153.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 115/343 (33%), Positives = 174/343 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G + A + + ++F WG +LG + + P + L+ N+ VA G
Sbjct: 2952 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3009
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAI 418
AVT+ G +Y G+ + LGL G +S + IPR+++ + + + G H A+
Sbjct: 3010 AVTVEGKVYACGEATNGRLGL-G-ISSGTVPIPRQITA-LSNYVVKKVAVHSGGRHAMAL 3066
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T GK+F++G+G G LGH R + PR +E LK + +CG H+AAI
Sbjct: 3067 TVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------- 3119
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTA 536
SS +L+TWG G G+LGHGD ++ P VKV +VACG + T+ALT
Sbjct: 3120 -----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174
Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G VFS G D+G+LG GS G P IE + + + I CG+ ++ V+TW
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3233
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GKG +LGHG + + + P +VE LR K++ V G+ A+
Sbjct: 3234 GKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276
Score = 413 (150.4 bits), Expect = 4.4e-34, P = 4.4e-34
Identities = 111/335 (33%), Positives = 169/335 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3957 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4015
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 4016 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A I AG LFTWG
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT-AAGD-----------LFTWG 4121
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGHGD+E ++ P V+ +ACG + T+ LT V+S G DYG+
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4181
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4182 LGRGGSDGCKVPMKID-SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
+ + P V+ L+ K+V ++ GS C G+
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDGL 4274
Score = 404 (147.3 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 111/331 (33%), Positives = 165/331 (49%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++S + IA S H + ++ G++FSWG G GG+LGHG
Sbjct: 475 TQAYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTV 534
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PKLI AL+G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 535 PLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDQ 592
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 593 TIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 651
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L V CG + A+ + +G +++TWG G +LGHG E
Sbjct: 652 IEKLQDLDIVKVRCGSQFSIALTK--------DG----QVYTWGKGDNQRLGHGTEEHVR 699
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T P + G
Sbjct: 700 YPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPG- 758
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 759 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 400 (145.9 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 102/318 (32%), Positives = 162/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D P+L+ +L NI +A H A++ +G++++WG G + G LG +
Sbjct: 480 SDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLE 537
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 538 EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPML 597
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + SCG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 598 VTGLKGLKVIDVSCGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 645
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG +IALT GQV++ G D +LG ++P +E
Sbjct: 646 CKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN--KQTPTLVEALRDK 623
G +K + + D+A GS H ++ SEV++WG +N Q H D K P + L K
Sbjct: 706 G-LKGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRITKPEPAALPGLDTK 762
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 763 HIVGIACGPAQSFAWSSC 780
Score = 384 (140.2 bits), Expect = 6.0e-31, P = 6.0e-31
Identities = 95/311 (30%), Positives = 156/311 (50%)
Query: 287 PKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
P +LES V + ++ G KH + ++ +G+++SWGE GKLGHG + P++I++
Sbjct: 4033 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4092
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L G + +A G H+ +T +GDL+TWG G + G LG P+ V ++G +
Sbjct: 4093 LRGIEVVDIAAGGAHSACITAAGDLFTWGKGRY--GRLGHGDSEDQLKPKLVEA-LQGYR 4149
Query: 405 ISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+ I CG T +T ++++GDG +G LG G VP ++++L +L V C
Sbjct: 4150 VIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVEC 4209
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + A+ + SG+ ++TWG G +LGHG + P V+
Sbjct: 4210 GSQFSVALTK-----SGA-------VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257
Query: 523 KVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIACG 579
+A G H + G+V++ G D GQLG G+T R+ ++ + I +ACG
Sbjct: 4258 AIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGD-GTTNAIQRPRLVAALQGKKINRVACG 4316
Query: 580 SYH-IAVVSSK 589
S H +A +SK
Sbjct: 4317 SAHTLAWSTSK 4327
Score = 337 (123.7 bits), Expect = 7.1e-26, P = 7.1e-26
Identities = 78/251 (31%), Positives = 126/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3094 PRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3153
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3154 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3210
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGA 3270
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + +++ WGD GQ G+G P V+ + +V
Sbjct: 3271 LHCLAVTDTG------------QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3318
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3319 ACGSSHSVAWT 3329
Score = 272 (100.8 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 64/203 (31%), Positives = 105/203 (51%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3135 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3194
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG +++ P
Sbjct: 3195 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGTDVHVRKP 3252
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T G+++ +GD G G+G + P V+ L+
Sbjct: 3253 QVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3311
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 3312 GQKITRVACGSSHSVAWTTVDVA 3334
Score = 271 (100.5 bits), Expect = 8.8e-19, P = 8.8e-19
Identities = 69/199 (34%), Positives = 98/199 (49%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D D L PK++E+ IACGS A + +T ++SWG+G GKLG G
Sbjct: 4128 LGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4187
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4188 DGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4244
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITS--AGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V
Sbjct: 4245 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 4303
Query: 451 TLKELKTVMASCGVWHTAA 469
L+ K +CG HT A
Sbjct: 4304 ALQGKKINRVACGSAHTLA 4322
Score = 268 (99.4 bits), Expect = 1.8e-18, P = 1.8e-18
Identities = 72/230 (31%), Positives = 115/230 (50%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3949 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 4006
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 4007 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4055
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + DIA G H A +++
Sbjct: 4056 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAG 4115
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
+++TWGKG G+LGHGD+E++ P LVEAL+ +V + CGS +CL
Sbjct: 4116 DLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165
Score = 260 (96.6 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 80/230 (34%), Positives = 109/230 (47%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L V + G A+ V G
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VEG 3015
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITI 532
K ++ G+ G+LG G + V +P + + KVA G +
Sbjct: 3016 K-----------VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAM 3064
Query: 533 ALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
ALT G++FS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3065 ALTVDGKIFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAAITSSG 3122
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3123 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172
Score = 218 (81.8 bits), Expect = 8.0e-16, Sum P(2) = 8.0e-16
Identities = 59/193 (30%), Positives = 96/193 (49%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L IAC K +++++ G++++ S LG P+L+ +L
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSD-TLG---------PQLVQSLA 492
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A++ +G++++WG G + G LG + P+ +S G+
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKLISALSGKQA 550
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + S
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 611 CGSGDAQTLAVTE 623
Score = 213 (80.0 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 51/148 (34%), Positives = 80/148 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4192 VPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4251
Query: 346 NGSNIHMVACGEFHTCAVTLSG--DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
G + +A G H T G ++YTWGD ++ G LG + + PR V+ ++G
Sbjct: 4252 QGKKVIAIATGSLHCVCCTEDGLGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGK 4308
Query: 404 QISSICCGPWHTAA-ITS----AGKLFT 426
+I+ + CG HT A TS AGKL T
Sbjct: 4309 KINRVACGSAHTLAWSTSKPANAGKLPT 4336
Score = 103 (41.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 42/149 (28%), Positives = 68/149 (45%)
Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
G +G A+VS P + L + +AC E ++ +G +YT LG
Sbjct: 430 GLIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQ 489
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S S I K++ +G H A+++ G++F++G G G LGHGD
Sbjct: 490 SLASRNIV-KIAAHSDG----------HHYLALSANGEVFSWGCGDGGRLGHGDTVPLEE 538
Query: 446 PREVETL--KEL-KTVM-ASCGVWHTAAI 470
P+ + L K+ K V+ +CG ++AAI
Sbjct: 539 PKLISALSGKQAGKHVVHIACGSTYSAAI 567
Score = 85 (35.0 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 24/90 (26%), Positives = 42/90 (46%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4276 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS--------- 4326
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P + GK PT++ +++ ++++I
Sbjct: 4327 ------KPANAGKLPTQVP--MEYNHLQEI 4348
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 499 (180.7 bits), Expect = 9.6e-42, Sum P(2) = 9.6e-42
Identities = 116/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G+++S GE + G+LG G+ + V P+ I A
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 1850
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 1851 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 1907
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 1908 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 1967
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 1968 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 2017
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 2076
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 2077 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 468 (169.8 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 116/364 (31%), Positives = 181/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 2749 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 2808
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 2809 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 2865
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + + +CG
Sbjct: 2866 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 2925
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 2926 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 2975
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 2976 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 3033
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H + EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 3034 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3093
Query: 642 KGVS 645
K S
Sbjct: 3094 KPAS 3097
Score = 418 (152.2 bits), Expect = 9.4e-33, Sum P(2) = 9.4e-33
Identities = 112/333 (33%), Positives = 169/333 (50%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
T + ++F WG +LG + + P + L+ N+ VA G AVT+ G +Y+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 372 WGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFG 428
G+ + LGL G S IPR+++ + + + G H A+T GK+F++G
Sbjct: 1825 CGEATNGRLGL-GMSSGTVP-IPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+G G LGH R + PR +E LK + +CG H+AA+ SS +L
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 1929
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSA 546
+TWG G G+LGHGD ++ P VKV +VACG + T+ALT G VFS G
Sbjct: 1930 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1989
Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
D+G+LG GS G P IE + + + I CG+ ++ V+TWGKG +LGH
Sbjct: 1990 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G + + + P +VE LR K++ V G+ A+
Sbjct: 2049 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2081
Score = 400 (145.9 bits), Expect = 8.7e-31, Sum P(2) = 8.7e-31
Identities = 108/334 (32%), Positives = 167/334 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 2726 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2784
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 2785 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2842
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A + AG L+TWG
Sbjct: 2843 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-AAGD-----------LYTWG 2890
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ +ACG + T+ LT V+S G DYG+
Sbjct: 2891 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2950
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 2951 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3009
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ + P V+ L+ K+V ++ GS C G
Sbjct: 3010 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDG 3042
Score = 339 (124.4 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 1899 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 1958
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 1959 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 2015
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 2075
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + SG +++ WGD GQ G+G P V+ + +V
Sbjct: 2076 LHCLAVTD-----SG-------QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 2123
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 2124 ACGSSHSVAWT 2134
Score = 288 (106.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 70/197 (35%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ IACGS A + +T ++SWG+G GKLG G
Sbjct: 2897 LGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 2956
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 2957 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 3013
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V L
Sbjct: 3014 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 3072
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 3073 QGKKVNRVACGSAHTLA 3089
Score = 276 (102.2 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 65/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 1940 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1999
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 2000 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 2057
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T +G+++ +GD G G+G + P V+ L+
Sbjct: 2058 QVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2116
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 2117 GQKITRVACGSSHSVAWTTVDVA 2139
Score = 267 (99.0 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 72/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 2718 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 2775
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 2776 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 2824
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 2825 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG 2884
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V + CGS +CL
Sbjct: 2885 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 2934
Score = 255 (94.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 82/231 (35%), Positives = 109/231 (47%)
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
TA I + K+F +G LG S VP ETL L V + G A+ V
Sbjct: 1763 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VE 1819
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
GK +++ G+ G+LG G + V +P + KVA G
Sbjct: 1820 GK-----------VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 1868
Query: 532 IALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 1869 TALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSS 1926
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 1927 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 1977
Score = 225 (84.3 bits), Expect = 5.9e-12, Sum P(2) = 5.9e-12
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 2961 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 3020
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H T G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 3021 QGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 3077
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 3078 NRVACGSAHTLAWSTSKPASAGKL 3101
Score = 82 (33.9 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 3043 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 3093
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 3094 ------KPASAGKLPAQVP--MEYNHLQEI 3115
Score = 38 (18.4 bits), Expect = 9.6e-42, Sum P(2) = 9.6e-42
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 1568 FCGRSGKQLKRCHSSQ--PG 1585
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 499 (180.7 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 116/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G+++S GE + G+LG G+ + V P+ I A
Sbjct: 1791 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 1850
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 1851 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 1907
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 1908 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 1967
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 1968 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 2017
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 2018 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 2076
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 2077 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 2132
Score = 468 (169.8 bits), Expect = 2.9e-38, Sum P(2) = 2.9e-38
Identities = 116/364 (31%), Positives = 181/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 2785 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 2844
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 2845 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 2901
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + + +CG
Sbjct: 2902 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 2961
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 2962 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 3011
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 3012 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 3069
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H + EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 3070 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3129
Query: 642 KGVS 645
K S
Sbjct: 3130 KPAS 3133
Score = 418 (152.2 bits), Expect = 9.7e-33, Sum P(2) = 9.7e-33
Identities = 112/333 (33%), Positives = 169/333 (50%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
T + ++F WG +LG + + P + L+ N+ VA G AVT+ G +Y+
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 1824
Query: 372 WGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFG 428
G+ + LGL G S IPR+++ + + + G H A+T GK+F++G
Sbjct: 1825 CGEATNGRLGL-GMSSGTVP-IPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 1881
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+G G LGH R + PR +E LK + +CG H+AA+ SS +L
Sbjct: 1882 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 1929
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSA 546
+TWG G G+LGHGD ++ P VKV +VACG + T+ALT G VFS G
Sbjct: 1930 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1989
Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
D+G+LG GS G P IE + + + I CG+ ++ V+TWGKG +LGH
Sbjct: 1990 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 2048
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G + + + P +VE LR K++ V G+ A+
Sbjct: 2049 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2081
Score = 400 (145.9 bits), Expect = 9.0e-31, Sum P(2) = 9.0e-31
Identities = 108/334 (32%), Positives = 167/334 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 2762 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 2820
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 2821 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2878
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A + AG L+TWG
Sbjct: 2879 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-AAGD-----------LYTWG 2926
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ +ACG + T+ LT V+S G DYG+
Sbjct: 2927 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 2986
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 2987 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3045
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ + P V+ L+ K+V ++ GS C G
Sbjct: 3046 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDG 3078
Score = 339 (124.4 bits), Expect = 3.7e-24, Sum P(2) = 3.7e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 1899 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 1958
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 1959 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 2015
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 2075
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + SG +++ WGD GQ G+G P V+ + +V
Sbjct: 2076 LHCLAVTD-----SG-------QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 2123
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 2124 ACGSSHSVAWT 2134
Score = 288 (106.4 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 70/197 (35%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ IACGS A + +T ++SWG+G GKLG G
Sbjct: 2933 LGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 2992
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 2993 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 3049
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V L
Sbjct: 3050 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 3108
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 3109 QGKKVNRVACGSAHTLA 3125
Score = 276 (102.2 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 65/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 1940 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 1999
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 2000 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 2057
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T +G+++ +GD G G+G + P V+ L+
Sbjct: 2058 QVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2116
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 2117 GQKITRVACGSSHSVAWTTVDVA 2139
Score = 267 (99.0 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 72/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 2754 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 2811
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 2812 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 2860
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 2861 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG 2920
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V + CGS +CL
Sbjct: 2921 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 2970
Score = 255 (94.8 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 82/231 (35%), Positives = 109/231 (47%)
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
TA I + K+F +G LG S VP ETL L V + G A+ V
Sbjct: 1763 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VE 1819
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
GK +++ G+ G+LG G + V +P + KVA G
Sbjct: 1820 GK-----------VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 1868
Query: 532 IALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 1869 TALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSS 1926
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 1927 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 1977
Score = 225 (84.3 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 2997 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 3056
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H T G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 3057 QGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 3113
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 3114 NRVACGSAHTLAWSTSKPASAGKL 3137
Score = 82 (33.9 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 3079 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 3129
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 3130 ------KPASAGKLPAQVP--MEYNHLQEI 3151
Score = 38 (18.4 bits), Expect = 9.8e-42, Sum P(2) = 9.8e-42
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 1568 FCGRSGKQLKRCHSSQ--PG 1585
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 499 (180.7 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 116/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G+++S GE + G+LG G+ + V P+ I A
Sbjct: 2926 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 2985
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 2986 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3042
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3043 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3102
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3103 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3152
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3153 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 3211
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3212 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3267
Score = 468 (169.8 bits), Expect = 5.5e-38, Sum P(2) = 5.5e-38
Identities = 116/364 (31%), Positives = 181/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3920 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 3979
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 3980 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 4036
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + + +CG
Sbjct: 4037 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4096
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 4097 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4146
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4147 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4204
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H + EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 4205 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4264
Query: 642 KGVS 645
K S
Sbjct: 4265 KPAS 4268
Score = 418 (152.2 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 112/333 (33%), Positives = 169/333 (50%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
T + ++F WG +LG + + P + L+ N+ VA G AVT+ G +Y+
Sbjct: 2900 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2959
Query: 372 WGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFG 428
G+ + LGL G S IPR+++ + + + G H A+T GK+F++G
Sbjct: 2960 CGEATNGRLGL-GMSSGTVP-IPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3016
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+G G LGH R + PR +E LK + +CG H+AA+ SS +L
Sbjct: 3017 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3064
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSA 546
+TWG G G+LGHGD ++ P VKV +VACG + T+ALT G VFS G
Sbjct: 3065 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3124
Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
D+G+LG GS G P IE + + + I CG+ ++ V+TWGKG +LGH
Sbjct: 3125 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3183
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G + + + P +VE LR K++ V G+ A+
Sbjct: 3184 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3216
Score = 405 (147.6 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 103/318 (32%), Positives = 162/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D+ P+L+ L NI +A H A+ +G++Y+WG G + G LG +
Sbjct: 425 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLE 482
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 483 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 542
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + +CG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 543 VAGLKGLKVIDVACGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 590
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG +IALT GQV+S G D +LG ++P +E
Sbjct: 591 CKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 650
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDK 623
G ++ + + D+A GS H ++ SEV++WG +N Q H D K PT + L K
Sbjct: 651 G-LQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPTALPGLDTK 707
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 708 HIVGIACGPAQSFAWSSC 725
Score = 400 (145.9 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 108/334 (32%), Positives = 167/334 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3897 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3955
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 3956 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A + AG L+TWG
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-AAGD-----------LYTWG 4061
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ +ACG + T+ LT V+S G DYG+
Sbjct: 4062 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4121
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4122 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4180
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ + P V+ L+ K+V ++ GS C G
Sbjct: 4181 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDG 4213
Score = 392 (143.0 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 106/331 (32%), Positives = 163/331 (49%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++ + IA S H + + G+++SWG G GG+LGHG
Sbjct: 420 TQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV 479
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PK+I A +G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 480 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDE 537
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 538 AIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 596
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L + CG + A+ + +G ++++WG G +LGHG E
Sbjct: 597 IEKLQDLDVIKVRCGSQFSIALTK--------DG----QVYSWGKGDNQRLGHGTEEHVR 644
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T PT + G
Sbjct: 645 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPG- 703
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 704 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 731
Score = 339 (124.4 bits), Expect = 6.8e-24, Sum P(2) = 6.8e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3034 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3093
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3094 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3150
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3210
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + SG +++ WGD GQ G+G P V+ + +V
Sbjct: 3211 LHCLAVTD-----SG-------QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3258
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3259 ACGSSHSVAWT 3269
Score = 288 (106.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 70/197 (35%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ IACGS A + +T ++SWG+G GKLG G
Sbjct: 4068 LGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4127
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4128 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4184
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V L
Sbjct: 4185 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4243
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 4244 QGKKVNRVACGSAHTLA 4260
Score = 276 (102.2 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 65/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3075 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3134
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 3135 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 3192
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T +G+++ +GD G G+G + P V+ L+
Sbjct: 3193 QVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3251
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 3252 GQKITRVACGSSHSVAWTTVDVA 3274
Score = 267 (99.0 bits), Expect = 3.6e-16, Sum P(2) = 3.6e-16
Identities = 72/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3889 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 3946
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 3947 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 3995
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 3996 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG 4055
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V + CGS +CL
Sbjct: 4056 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4105
Score = 255 (94.8 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 82/231 (35%), Positives = 109/231 (47%)
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
TA I + K+F +G LG S VP ETL L V + G A+ V
Sbjct: 2898 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VE 2954
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
GK +++ G+ G+LG G + V +P + KVA G
Sbjct: 2955 GK-----------VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3003
Query: 532 IALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3004 TALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSS 3061
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3062 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3112
Score = 225 (84.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4132 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4191
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H T G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 4192 QGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 4248
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 4249 NRVACGSAHTLAWSTSKPASAGKL 4272
Score = 221 (82.9 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L +AC K +++++ G++++ S D+ P+L+ L
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLA 437
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 438 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 495
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 556 CGSGDAQTLAVTE 568
Score = 82 (33.9 bits), Expect = 4.2e-20, Sum P(3) = 4.2e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4214 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 4264
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 4265 ------KPASAGKLPAQVP--MEYNHLQEI 4286
Score = 38 (18.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 2703 FCGRSGKQLKRCHSSQ--PG 2720
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 499 (180.7 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 116/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G+++S GE + G+LG G+ + V P+ I A
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 3042
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3099
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3160 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3209
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 3268
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3269 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 468 (169.8 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
Identities = 116/364 (31%), Positives = 181/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3977 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 4036
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 4037 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 4093
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + + +CG
Sbjct: 4094 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG 4153
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 4154 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4203
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4204 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4261
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H + EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 4262 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4321
Query: 642 KGVS 645
K S
Sbjct: 4322 KPAS 4325
Score = 418 (152.2 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 112/333 (33%), Positives = 169/333 (50%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
T + ++F WG +LG + + P + L+ N+ VA G AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Query: 372 WGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFG 428
G+ + LGL G S IPR+++ + + + G H A+T GK+F++G
Sbjct: 3017 CGEATNGRLGL-GMSSGTVP-IPRQITA-LSSYVVKKVAVHSGGRHATALTVDGKVFSWG 3073
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+G G LGH R + PR +E LK + +CG H+AA+ SS +L
Sbjct: 3074 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGEL 3121
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSA 546
+TWG G G+LGHGD ++ P VKV +VACG + T+ALT G VFS G
Sbjct: 3122 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181
Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
D+G+LG GS G P IE + + + I CG+ ++ V+TWGKG +LGH
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3240
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G + + + P +VE LR K++ V G+ A+
Sbjct: 3241 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 406 (148.0 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 103/318 (32%), Positives = 162/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D+ P+L+ L NI +A H A+ +G++Y+WG G + G LG +
Sbjct: 480 SDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLE 537
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + +CG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 645
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG +IALT GQV+S G D +LG ++P +E
Sbjct: 646 CKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDK 623
G ++ + + D+A GS H ++ SEV++WG +N Q H D K PT + L K
Sbjct: 706 G-LQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPTALPGLDSK 762
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 763 HIVGIACGPAQSFAWSSC 780
Score = 400 (145.9 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 108/334 (32%), Positives = 167/334 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3954 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4012
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 4013 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A + AG L+TWG
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-AAGD-----------LYTWG 4118
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ +ACG + T+ LT V+S G DYG+
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4178
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4179 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ + P V+ L+ K+V ++ GS C G
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDG 4270
Score = 393 (143.4 bits), Expect = 7.8e-30, Sum P(2) = 7.8e-30
Identities = 106/331 (32%), Positives = 163/331 (49%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++ + IA S H + + G+++SWG G GG+LGHG
Sbjct: 475 TQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV 534
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PK+I A +G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDE 592
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 593 AIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 651
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L + CG + A+ + +G ++++WG G +LGHG E
Sbjct: 652 IEKLQDLDVIKVRCGSQFSIALTK--------DG----QVYSWGKGDNQRLGHGTEEHVR 699
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T PT + G
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTALPG- 758
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 759 LDSKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 339 (124.4 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3150
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3151 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3207
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3267
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + SG +++ WGD GQ G+G P V+ + +V
Sbjct: 3268 LHCLAVTD-----SG-------QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3315
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3316 ACGSSHSVAWT 3326
Score = 288 (106.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 70/197 (35%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ IACGS A + +T ++SWG+G GKLG G
Sbjct: 4125 LGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4184
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4185 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4241
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V L
Sbjct: 4242 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4300
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 4301 QGKKVNRVACGSAHTLA 4317
Score = 276 (102.2 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 65/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 3249
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T +G+++ +GD G G+G + P V+ L+
Sbjct: 3250 QVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 3309 GQKITRVACGSSHSVAWTTVDVA 3331
Score = 267 (99.0 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 72/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3946 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 4003
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 4004 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4052
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 4053 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG 4112
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V + CGS +CL
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
Score = 255 (94.8 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 82/231 (35%), Positives = 109/231 (47%)
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
TA I + K+F +G LG S VP ETL L V + G A+ V
Sbjct: 2955 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VE 3011
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
GK +++ G+ G+LG G + V +P + KVA G
Sbjct: 3012 GK-----------VYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060
Query: 532 IALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSS 3118
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3119 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
Score = 225 (84.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4189 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4248
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H T G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 4249 QGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 4305
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 4306 NRVACGSAHTLAWSTSKPASAGKL 4329
Score = 221 (82.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 57/193 (29%), Positives = 94/193 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L +AC K +++++ G++++ S D+ P+L+ L
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNS----------DMLAPQLVQGLA 492
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 611 CGSGDAQTLAVTE 623
Score = 82 (33.9 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4271 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 4321
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 4322 ------KPASAGKLPAQVP--MEYNHLQEI 4343
Score = 39 (18.8 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
Identities = 10/16 (62%), Positives = 11/16 (68%)
Query: 840 RAQLEDLTRKSQFLEV 855
RAQLED S+ LEV
Sbjct: 2186 RAQLEDYFPDSENLEV 2201
Score = 38 (18.4 bits), Expect = 1.9e-41, Sum P(2) = 1.9e-41
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 2760 FCGRSGKQLKRCHSSQ--PG 2777
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 498 (180.4 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 115/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G++++ GE + G+LG G+ + V P+ I A
Sbjct: 2982 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3041
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 3042 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3098
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3099 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3158
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3159 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3208
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3209 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 3267
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3268 HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 469 (170.2 bits), Expect = 4.4e-38, Sum P(2) = 4.4e-38
Identities = 117/364 (32%), Positives = 181/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3975 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 4034
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 4035 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 4091
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + V +CG
Sbjct: 4092 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 4151
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 4152 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4201
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4202 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4259
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H + EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 4260 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4319
Query: 642 KGVS 645
K S
Sbjct: 4320 KPAS 4323
Score = 420 (152.9 bits), Expect = 1.1e-32, Sum P(2) = 1.1e-32
Identities = 114/343 (33%), Positives = 174/343 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G + A + + ++F WG +LG + + P + L+ N+ VA G
Sbjct: 2948 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3005
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAI 418
AVT+ G +Y G+ + LGL G +S + IPR+++ + + + G H A+
Sbjct: 3006 AVTVEGKVYACGEATNGRLGL-G-ISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 3062
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T GK+F++G+G G LGH R + PR +E LK + +CG H+AA+
Sbjct: 3063 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3115
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTA 536
SS +L+TWG G G+LGHGD ++ P VKV +VACG + T+ALT
Sbjct: 3116 -----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170
Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G VFS G D+G+LG GS G P IE + + + I CG+ ++ V+TW
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3229
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GKG +LGHG + + + P +VE LR K++ V G+ A+
Sbjct: 3230 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 400 (145.9 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 108/334 (32%), Positives = 167/334 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3952 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4010
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 4011 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A + AG L+TWG
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-AAGD-----------LYTWG 4116
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ +ACG + T+ LT V+S G DYG+
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4176
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4177 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ + P V+ L+ K+V ++ GS C G
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDG 4268
Score = 399 (145.5 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 102/318 (32%), Positives = 160/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D P+L+ L NI +A H A+ +G++Y+WG G + G LG +
Sbjct: 479 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLE 536
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 537 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + +CG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 597 VAGLKGLKVIDVACGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 644
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG +IALT GQV+S G D +LG ++P +E
Sbjct: 645 CKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 704
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDK 623
G ++ + + D+A GS H ++ SEV++WG +N Q H D K P + L K
Sbjct: 705 G-LQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPAALPGLDTK 761
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 762 HIVGIACGPAQSFAWSSC 779
Score = 389 (142.0 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 106/331 (32%), Positives = 162/331 (48%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++ + IA S H + + G+++SWG G GG+LGHG
Sbjct: 474 TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV 533
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PK+I A +G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 534 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDE 591
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 592 AIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 650
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L V CG + A+ + +G ++++WG G +LGHG E
Sbjct: 651 IEKLQDLDVVKVRCGSQFSIALTK--------DG----QVYSWGKGDNQRLGHGTEEHVR 698
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T P + G
Sbjct: 699 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPG- 757
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 758 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 785
Score = 339 (124.4 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3090 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3149
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3150 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3206
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3266
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + SG +++ WGD GQ G+G P V+ + +V
Sbjct: 3267 LHCLAVTD-----SG-------QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3314
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3315 ACGSSHSVAWT 3325
Score = 289 (106.8 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 70/197 (35%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ IACGS A + +T ++SWG+G GKLG G
Sbjct: 4123 LGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4182
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4183 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4239
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V L
Sbjct: 4240 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4298
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 4299 QGKKVNRVACGSAHTLA 4315
Score = 276 (102.2 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 65/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3131 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3190
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 3191 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 3248
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T +G+++ +GD G G+G + P V+ L+
Sbjct: 3249 QVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3307
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 3308 GQKITRVACGSSHSVAWTTVDVA 3330
Score = 268 (99.4 bits), Expect = 2.9e-16, Sum P(2) = 2.9e-16
Identities = 72/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3944 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 4001
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 4002 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4050
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 4051 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG 4110
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V + CGS +CL
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
Score = 256 (95.2 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 81/230 (35%), Positives = 107/230 (46%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L V + G A+ V G
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VEG 3011
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITI 532
K ++ G+ G+LG G + V +P + KVA G
Sbjct: 3012 K-----------VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHAT 3060
Query: 533 ALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3061 ALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSSG 3118
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3119 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
Score = 225 (84.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4187 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4246
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H T G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 4303
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 4304 NRVACGSAHTLAWSTSKPASAGKL 4327
Score = 219 (82.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 58/193 (30%), Positives = 93/193 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L IAC K +++++ G++++ S D P+L+ L
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLA 491
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 610 CGSGDAQTLAVTE 622
Score = 82 (33.9 bits), Expect = 4.4e-20, Sum P(3) = 4.4e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4269 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 4319
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 4320 ------KPASAGKLPAQVP--MEYNHLQEI 4341
Score = 38 (18.4 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 2759 FCGRSGKQLKRCHSSQ--PG 2776
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 497 (180.0 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 115/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G++++ GE + G+LG G+ + V P+ I A
Sbjct: 2903 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 2962
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 2963 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3019
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3020 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3079
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3080 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3129
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3130 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 3188
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3189 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3244
Score = 470 (170.5 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 118/364 (32%), Positives = 180/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3898 VPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESI 3957
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G
Sbjct: 3958 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGT 4014
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + V +CG
Sbjct: 4015 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4074
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 4075 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4124
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4125 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4182
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H S EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 4183 HCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4242
Query: 642 KGVS 645
K S
Sbjct: 4243 KPAS 4246
Score = 420 (152.9 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 114/343 (33%), Positives = 174/343 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G + A + + ++F WG +LG + + P + L+ N+ VA G
Sbjct: 2869 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 2926
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAI 418
AVT+ G +Y G+ + LGL G +S + IPR+++ + + + G H A+
Sbjct: 2927 AVTVEGKVYACGEATNGRLGL-G-ISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 2983
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T GK+F++G+G G LGH R + PR +E LK + +CG H+AA+
Sbjct: 2984 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3036
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTA 536
SS +L+TWG G G+LGHGD ++ P VKV +VACG + T+ALT
Sbjct: 3037 -----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3091
Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G VFS G D+G+LG GS G P IE + + + I CG+ ++ V+TW
Sbjct: 3092 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3150
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GKG +LGHG + + + P +VE LR K++ V G+ A+
Sbjct: 3151 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3193
Score = 399 (145.5 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 101/318 (31%), Positives = 161/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D P+L+ L NI +A H A+ +G++Y+WG G + G LG +
Sbjct: 390 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLE 447
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 448 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 507
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + +CG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 508 VAGLKGLKVIDVACGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 555
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG ++ALT GQV+S G D +LG ++P +E
Sbjct: 556 CKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 615
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDK 623
G ++ + + D+A GS H ++ SEV++WG +N Q H D K P+ + L K
Sbjct: 616 G-LQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTK 672
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 673 HIVGIACGPAQSFAWSSC 690
Score = 398 (145.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 107/323 (33%), Positives = 164/323 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3875 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 3933
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 3934 YGAGGRLGVGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 3991
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ + V + G H+A + AG L+TWG
Sbjct: 3992 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT-AAGD-----------LYTWG 4039
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ VACG + T+ LT V+S G DYG+
Sbjct: 4040 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4099
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4100 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4158
Query: 610 NKQTPTLVEALRDKQVKSVVCGS 632
+ + P V+ L+ K+V ++ GS
Sbjct: 4159 HVRRPRQVQGLQGKKVIAIATGS 4181
Score = 391 (142.7 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 106/331 (32%), Positives = 163/331 (49%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++ + IA S H + + G+++SWG G GG+LGHG
Sbjct: 385 TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV 444
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PK+I A +G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 445 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDE 502
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 503 AIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 561
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L V CG + A+ + +G ++++WG G +LGHG E
Sbjct: 562 IEKLQDLDVVKVRCGSQFSVALTK--------DG----QVYSWGKGDNQRLGHGTEEHVR 609
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T P+ + G
Sbjct: 610 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPG- 668
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 669 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 696
Score = 339 (124.4 bits), Expect = 8.6e-24, Sum P(2) = 8.6e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3011 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3070
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3071 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3127
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3128 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3187
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + AG+ ++ WGD GQ G+G P V+ + +V
Sbjct: 3188 LHCLAVTD-AGQ-----------VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3235
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3236 ACGSSHSVAWT 3246
Score = 284 (105.0 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 68/197 (34%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ +ACGS A + +T ++SWG+G GKLG G
Sbjct: 4046 LGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4105
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4106 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4162
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H + G+++T+GD G LG G ++ PR V L
Sbjct: 4163 PRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4221
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 4222 QGKKVNRVACGSAHTLA 4238
Score = 279 (103.3 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 66/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3052 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3111
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 3112 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 3169
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T AG+++ +GD G G+G + P V+ L+
Sbjct: 3170 QVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3228
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 3229 GQKITRVACGSSHSVAWTTVDVA 3251
Score = 271 (100.5 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 73/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3867 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT- 3924
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 3925 -------ADG----KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 3973
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 3974 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAG 4033
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V V CGS +CL
Sbjct: 4034 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4083
Score = 256 (95.2 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 81/230 (35%), Positives = 107/230 (46%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L V + G A+ V G
Sbjct: 2874 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VEG 2932
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITI 532
K ++ G+ G+LG G + V +P + KVA G
Sbjct: 2933 K-----------VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHAT 2981
Query: 533 ALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 2982 ALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSSG 3039
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3040 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3089
Score = 221 (82.9 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 46/144 (31%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4110 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4169
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H + G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 4170 QGKKVIAIATGSLHCVCCSEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 4226
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 4227 NRVACGSAHTLAWSTSKPASAGKL 4250
Score = 219 (82.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 58/193 (30%), Positives = 93/193 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L IAC K +++++ G++++ S D P+L+ L
Sbjct: 353 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLA 402
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 403 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 460
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 461 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 520
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 521 CGSGDAQTLAVTE 533
Score = 82 (33.9 bits), Expect = 2.5e-20, Sum P(3) = 2.5e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4192 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 4242
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 4243 ------KPASAGKLPVQVP--MEYNHLQEI 4264
Score = 37 (18.1 bits), Expect = 4.0e-41, Sum P(2) = 4.0e-41
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 2680 FCGRSGKQLKRCHNSQ--PG 2697
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 497 (180.0 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 115/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G++++ GE + G+LG G+ + V P+ I A
Sbjct: 2993 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 3052
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 3053 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3109
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3110 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3169
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3170 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3219
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3220 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 3278
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3279 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3334
Score = 470 (170.5 bits), Expect = 4.3e-38, Sum P(2) = 4.3e-38
Identities = 118/364 (32%), Positives = 180/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3988 VPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESI 4047
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G
Sbjct: 4048 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGT 4104
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + V +CG
Sbjct: 4105 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4164
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 4165 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4214
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4215 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4272
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H S EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 4273 HCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4332
Query: 642 KGVS 645
K S
Sbjct: 4333 KPAS 4336
Score = 420 (152.9 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 114/343 (33%), Positives = 174/343 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G + A + + ++F WG +LG + + P + L+ N+ VA G
Sbjct: 2959 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3016
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAI 418
AVT+ G +Y G+ + LGL G +S + IPR+++ + + + G H A+
Sbjct: 3017 AVTVEGKVYACGEATNGRLGL-G-ISSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 3073
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T GK+F++G+G G LGH R + PR +E LK + +CG H+AA+
Sbjct: 3074 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3126
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTA 536
SS +L+TWG G G+LGHGD ++ P VKV +VACG + T+ALT
Sbjct: 3127 -----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3181
Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G VFS G D+G+LG GS G P IE + + + I CG+ ++ V+TW
Sbjct: 3182 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3240
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GKG +LGHG + + + P +VE LR K++ V G+ A+
Sbjct: 3241 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3283
Score = 399 (145.5 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 101/318 (31%), Positives = 161/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D P+L+ L NI +A H A+ +G++Y+WG G + G LG +
Sbjct: 480 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLE 537
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + +CG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 645
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG ++ALT GQV+S G D +LG ++P +E
Sbjct: 646 CKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDK 623
G ++ + + D+A GS H ++ SEV++WG +N Q H D K P+ + L K
Sbjct: 706 G-LQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPSALPGLDTK 762
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 763 HIVGIACGPAQSFAWSSC 780
Score = 398 (145.2 bits), Expect = 3.6e-30, Sum P(2) = 3.6e-30
Identities = 107/323 (33%), Positives = 164/323 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3965 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATG 4023
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 4024 YGAGGRLGVGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4081
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ + V + G H+A + AG L+TWG
Sbjct: 4082 GKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT-AAGD-----------LYTWG 4129
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ VACG + T+ LT V+S G DYG+
Sbjct: 4130 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4189
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4190 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4248
Query: 610 NKQTPTLVEALRDKQVKSVVCGS 632
+ + P V+ L+ K+V ++ GS
Sbjct: 4249 HVRRPRQVQGLQGKKVIAIATGS 4271
Score = 391 (142.7 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 106/331 (32%), Positives = 163/331 (49%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++ + IA S H + + G+++SWG G GG+LGHG
Sbjct: 475 TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV 534
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PK+I A +G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDE 592
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 593 AIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 651
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L V CG + A+ + +G ++++WG G +LGHG E
Sbjct: 652 IEKLQDLDVVKVRCGSQFSVALTK--------DG----QVYSWGKGDNQRLGHGTEEHVR 699
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T P+ + G
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPG- 758
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 759 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 339 (124.4 bits), Expect = 9.0e-24, Sum P(2) = 9.0e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3101 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3160
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3161 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3217
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3218 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3277
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + AG+ ++ WGD GQ G+G P V+ + +V
Sbjct: 3278 LHCLAVTD-AGQ-----------VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3325
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3326 ACGSSHSVAWT 3336
Score = 284 (105.0 bits), Expect = 7.3e-18, Sum P(2) = 7.3e-18
Identities = 68/197 (34%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ +ACGS A + +T ++SWG+G GKLG G
Sbjct: 4136 LGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4195
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4196 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4252
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H + G+++T+GD G LG G ++ PR V L
Sbjct: 4253 PRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4311
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 4312 QGKKVNRVACGSAHTLA 4328
Score = 279 (103.3 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 66/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3142 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3201
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 3202 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 3259
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T AG+++ +GD G G+G + P V+ L+
Sbjct: 3260 QVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3318
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A V+VA
Sbjct: 3319 GQKITRVACGSSHSVAWTTVDVA 3341
Score = 271 (100.5 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 73/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3957 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT- 4014
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 4015 -------ADG----KLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4063
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 4064 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAG 4123
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V V CGS +CL
Sbjct: 4124 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4173
Score = 256 (95.2 bits), Expect = 7.0e-15, Sum P(2) = 7.0e-15
Identities = 81/230 (35%), Positives = 107/230 (46%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L V + G A+ V G
Sbjct: 2964 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VEG 3022
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITI 532
K ++ G+ G+LG G + V +P + KVA G
Sbjct: 3023 K-----------VYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHAT 3071
Query: 533 ALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3072 ALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSSG 3129
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3130 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3179
Score = 221 (82.9 bits), Expect = 3.7e-11, Sum P(2) = 3.7e-11
Identities = 46/144 (31%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4200 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4259
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H + G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 4260 QGKKVIAIATGSLHCVCCSEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 4316
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 4317 NRVACGSAHTLAWSTSKPASAGKL 4340
Score = 219 (82.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 58/193 (30%), Positives = 93/193 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L IAC K +++++ G++++ S D P+L+ L
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLA 492
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 611 CGSGDAQTLAVTE 623
Score = 82 (33.9 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4282 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 4332
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 4333 ------KPASAGKLPVQVP--MEYNHLQEI 4354
Score = 37 (18.1 bits), Expect = 4.2e-41, Sum P(2) = 4.2e-41
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 2770 FCGRSGKQLKRCHNSQ--PG 2787
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 495 (179.3 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 115/356 (32%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G++++ GE + G+LG G+ + V P+ I A
Sbjct: 2983 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITA 3042
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 3043 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3099
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AA+TS+G+L+T+G G +G LGHGD ++ P+ V+ L + + +C
Sbjct: 3100 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3159
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T GL +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3160 G----SRDAQTLALTD--EGL----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3209
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3210 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGAL 3268
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +VY WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3269 HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 470 (170.5 bits), Expect = 3.4e-38, Sum P(2) = 3.4e-38
Identities = 117/364 (32%), Positives = 181/364 (49%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3978 VPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 4037
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G++Y+WG+ G LG + PR + + G+
Sbjct: 4038 QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGI 4094
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ + G H+A +T+AG L+T+G G +G LGH D P+ VE L+ + V +CG
Sbjct: 4095 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG 4154
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ T +++WGDG G+LG G ++ VP+ + + K
Sbjct: 4155 SGDAQTLCLTDDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4204
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4205 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4262
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H + EVYTWG GQLG G Q P LV AL+ K+V V CGS T A
Sbjct: 4263 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4322
Query: 642 KGVS 645
K S
Sbjct: 4323 KPAS 4326
Score = 418 (152.2 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 114/343 (33%), Positives = 174/343 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G + A + + ++F WG +LG + + P + L+ N+ VA G
Sbjct: 2949 AAGLESAATI--RTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLF 3006
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAI 418
AVT+ G +Y G+ + LGL G +S + IPR+++ + + + G H A+
Sbjct: 3007 AVTVEGKVYACGEATNGRLGL-G-LSSGTVPIPRQITA-LSSYVVKKVAVHSGGRHATAL 3063
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T GK+F++G+G G LGH R + PR +E LK + +CG H+AA+
Sbjct: 3064 TVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------- 3116
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTA 536
SS +L+TWG G G+LGHGD ++ P VKV +VACG + T+ALT
Sbjct: 3117 -----SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G VFS G D+G+LG GS G P IE + + + I CG+ ++ V+TW
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3230
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GKG +LGHG + + + P +VE LR K++ V G+ A+
Sbjct: 3231 GKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 401 (146.2 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 109/334 (32%), Positives = 167/334 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 4013
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+++++G+
Sbjct: 4014 YGAGGRLGIGGTESVSTPTLLESI--QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A + AG L+TWG
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT-AAGD-----------LYTWG 4119
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGH D+E ++ P V+ VACG + T+ LT V+S G DYG+
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGK 4179
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4180 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ + P V+ L+ K+V ++ GS C G
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDG 4271
Score = 399 (145.5 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 102/318 (32%), Positives = 160/318 (50%)
Query: 334 ADVSYPKLIDALNGSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
+D P+L+ L NI +A H A+ +G++Y+WG G + G LG +
Sbjct: 480 SDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLE 537
Query: 392 IPRKVS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
P+ +S G+ G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P
Sbjct: 538 EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Query: 449 VETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
V LK LK + +CG T A+ E NG ++++WGDG G+LG G ++
Sbjct: 598 VAGLKGLKVIDVACGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDG 645
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE 565
P ++ D+ KV CG +IALT GQV+S G D +LG ++P +E
Sbjct: 646 CKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDK 623
G ++ + + D+A GS H ++ SEV++WG +N Q H D K P + L K
Sbjct: 706 G-LQGKKVIDVAAGSTHCLALTEDSEVHSWG--SNDQCQHFDTLRVTKPEPAALPGLDTK 762
Query: 624 QVKSVVCG--SNFTAAIC 639
+ + CG +F + C
Sbjct: 763 HIVGIACGPAQSFAWSSC 780
Score = 389 (142.0 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 106/331 (32%), Positives = 162/331 (48%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ A D L P++++ + IA S H + + G+++SWG G GG+LGHG
Sbjct: 475 TQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTV 534
Query: 335 DVSYPKLIDALNGSNI--HMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+ PK+I A +G H+V ACG ++ A+T G+LYTWG G N G LG S
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDE 592
Query: 391 WIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G P+
Sbjct: 593 AIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKL 651
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
+E L++L V CG + A+ + +G ++++WG G +LGHG E
Sbjct: 652 IEKLQDLDVVKVRCGSQFSIALTK--------DG----QVYSWGKGDNQRLGHGTEEHVR 699
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGN 567
P ++ VA G + +ALT +V S GS D Q + T P + G
Sbjct: 700 YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPG- 758
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+ ++I IACG SS SE W G
Sbjct: 759 LDTKHIVGIACGPAQSFAWSSCSE---WSIG 786
Score = 339 (124.4 bits), Expect = 7.0e-24, Sum P(2) = 7.0e-24
Identities = 80/251 (31%), Positives = 128/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G++++WG G G+LGHG PK++ L
Sbjct: 3091 PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 3150
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3151 GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3207
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGA 3267
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ + AG+ ++ WGD GQ G+G P V+ + +V
Sbjct: 3268 LHCLAVTD-AGQ-----------VYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3315
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3316 ACGSSHSVAWT 3326
Score = 288 (106.4 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 69/197 (35%), Positives = 100/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +D D L PK++E+ +ACGS A + +T ++SWG+G GKLG G
Sbjct: 4126 LGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGS 4185
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4186 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4242
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V L
Sbjct: 4243 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4301
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 4302 QGKKVNRVACGSAHTLA 4318
Score = 278 (102.9 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 65/203 (32%), Positives = 106/203 (52%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3132 LGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGS 3191
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG S++ P
Sbjct: 3192 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGSDVHVRKP 3249
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T AG+++ +GD G G+G + P V+ L+
Sbjct: 3250 QVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308
Query: 454 ELKTVMASCGVWHTAA--IVEVA 474
K +CG H+ A ++VA
Sbjct: 3309 GQKITRVACGSSHSVAWTTIDVA 3331
Score = 269 (99.8 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 73/230 (31%), Positives = 114/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3947 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT- 4004
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 4005 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4053
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+V+S G A+ G+LG + R+ +++ + D+A G H A V++
Sbjct: 4054 CLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAG 4113
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
++YTWGKG G+LGH D+E++ P LVEAL+ +V V CGS +CL
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163
Score = 255 (94.8 bits), Expect = 7.1e-15, Sum P(2) = 7.1e-15
Identities = 81/230 (35%), Positives = 107/230 (46%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L V + G A+ V G
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVT-VEG 3012
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITI 532
K ++ G+ G+LG G + V +P + KVA G
Sbjct: 3013 K-----------VYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHAT 3061
Query: 533 ALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3062 ALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAALTSSG 3119
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
Score = 225 (84.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 47/144 (32%), Positives = 78/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4190 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4249
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H T G++YTWGD ++ G LG + + PR V+ ++G ++
Sbjct: 4250 QGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKV 4306
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ SAGKL
Sbjct: 4307 NRVACGSAHTLAWSTSKPASAGKL 4330
Score = 219 (82.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 58/193 (30%), Positives = 93/193 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L IAC K +++++ G++++ S D P+L+ L
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNS----------DTLAPQLVQGLA 492
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 462 CGVW--HTAAIVE 472
CG T A+ E
Sbjct: 611 CGSGDAQTLAVTE 623
Score = 82 (33.9 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 24/90 (26%), Positives = 41/90 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWGD EGQLG G P V +VACG + T+A + +
Sbjct: 4272 EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS--------- 4322
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
P S GK P ++ +++ ++++I
Sbjct: 4323 ------KPASAGKLPAQVP--MEYNHLQEI 4344
Score = 38 (18.4 bits), Expect = 5.5e-41, Sum P(2) = 5.5e-41
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 53 YAGKEEKQLKLSHVSRIIPG 72
+ G+ KQLK H S+ PG
Sbjct: 2760 FCGRSGKQLKRCHSSQ--PG 2777
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 487 (176.5 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 113/356 (31%), Positives = 194/356 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
+P E+ L+ +A GSK VT +G++++ GE + G+LG G+ + + P+ I A
Sbjct: 2978 VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISA 3037
Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
L+ + VA G H A+T+ G +++WG+G + G LG S ++ PR + ++
Sbjct: 3038 LSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3094
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
+I I CG H+AAITS+G+L+++G G +G LGHGD ++ P+ V+ L + V +C
Sbjct: 3095 KRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVAC 3154
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G + + T G+ +F+WGDG G+LG G +E +P ++ + C
Sbjct: 3155 G----SRDAQTLALTD--EGM----VFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVC 3204
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
++ CG ++ALT +G V++ G DY +LG + P +EG ++ + I +A G+
Sbjct: 3205 QIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEG-LRGKKIVHVAVGAL 3263
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H V+ +V+ WG +GQ G+G + PTLV+ L +++ V CGS+ + A
Sbjct: 3264 HCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3319
Score = 476 (172.6 bits), Expect = 9.3e-39, Sum P(2) = 9.3e-39
Identities = 116/356 (32%), Positives = 181/356 (50%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P E+ L + G + VT G++++ G G+GG+LG G VS P L++++
Sbjct: 3973 VPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI 4032
Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
I VA G H A++ G+LY+WG+ G LG + PR + + G+
Sbjct: 4033 QHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED--GKLGHGNRSPCDRPRVIES-LRGV 4089
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I G H+A IT++G+L+T+G G +G LGHGD P+ VE L+ + + +CG
Sbjct: 4090 EVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACG 4149
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+G +++WGDG G+LG G ++ VP+ + + K
Sbjct: 4150 ----------SGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK 4199
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSY 581
V CG ++ALT +G V++ G DY +LG GS + P +++G ++ + + IA GS
Sbjct: 4200 VECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSL 4257
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
H + EVYTWG GQLG G Q P LV AL+ K++ V CGS T A
Sbjct: 4258 HCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4313
Score = 416 (151.5 bits), Expect = 3.9e-32, Sum P(2) = 3.9e-32
Identities = 113/333 (33%), Positives = 169/333 (50%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
T + ++F WG +LG + + P + L+ N+ VA G AVT G +Y
Sbjct: 2952 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 3011
Query: 372 WGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFG 428
G+ + LGL G +S + IPR++S + + + G H A+T GK+F++G
Sbjct: 3012 CGEATNGRLGL-G-LSSGTIPIPRQISA-LSNYVVKKVAVHSGGRHAMALTVDGKVFSWG 3068
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+G G LGH R + PR +E LK + +CG H+AAI SS +L
Sbjct: 3069 EGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SSGEL 3116
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSA 546
++WG G G+LGHGD ++ P VKV +VACG + T+ALT G VFS G
Sbjct: 3117 YSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDG 3176
Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
D+G+LG GS G P IE + + + I CG+ ++ V+TWGKG +LGH
Sbjct: 3177 DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3235
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G + + + P +VE LR K++ V G+ A+
Sbjct: 3236 GTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3268
Score = 412 (150.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 111/334 (33%), Positives = 169/334 (50%)
Query: 315 GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G I+ WG G+LG G+E A V P +AL + GE AVT G LY G
Sbjct: 3950 GTIYGWGHNHRGQLG-GIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATG 4008
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G LG+ G S + + + Q ++ ++ G H A++S G+L+++G+
Sbjct: 4009 YGAGGRLGIGGTESVSTPTLLESI--QHVFIRKVAVNSGGKHCLALSSEGELYSWGEAED 4066
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+RS PR +E+L+ ++ V + G H+A I +S +L+TWG
Sbjct: 4067 GKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT------------ASGELYTWG 4114
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGHGD+E ++ P V+ VACG + T+ LT V+S G DYG+
Sbjct: 4115 KGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGK 4174
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P +I+ ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4175 LGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4233
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ + P V+ L+ K+V ++ GS C G
Sbjct: 4234 HVRRPRQVQGLQGKKVIAIATGS-LHCVCCTEDG 4266
Score = 384 (140.2 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 101/321 (31%), Positives = 164/321 (51%)
Query: 339 PKLIDALNGSNIHMVAC---GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
P L+ AL I +A G+ H A++++G++++WG G + G LG P
Sbjct: 474 PMLVHALTSRKIMKLAAHPDGQ-HYLALSVNGEVFSWGCG--DGGRLGHGDTTYLEEPTM 530
Query: 396 VS---GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
+S G+ G Q+ I CG ++AAIT+ G+L T+G G +G LGHG + P V L
Sbjct: 531 ISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTAL 590
Query: 453 KELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
K LK + +CG T A+ E NG ++++WGDG G+LG G ++ P
Sbjct: 591 KGLKVIDVACGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTP 638
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIK 569
V+ D+ KV CG ++ALT GQV++ G D +LG ++P ++ +++
Sbjct: 639 KLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLD-SLQ 697
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKS 627
+ + DIA GS H ++ + EV++WG +N +L H D NK+ P + L K +
Sbjct: 698 GKRVVDIAVGSTHCLALTEEGEVHSWG--SNDKLQHFDTLFSNKKQPKALPGLNSKHIVG 755
Query: 628 VVCG--SNFTAAICLHKGVSI 646
+ CG +F+ + C V +
Sbjct: 756 ISCGPGQSFSWSSCSEWSVGL 776
Score = 358 (131.1 bits), Expect = 7.9e-26, Sum P(2) = 7.9e-26
Identities = 98/301 (32%), Positives = 147/301 (48%)
Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG----SNIHMVACGEFHTC 361
+H + ++ G++FSWG G GG+LGHG + P +I +G + +ACG ++
Sbjct: 495 QHYLALSVNGEVFSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSA 554
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW--HTAAIT 419
A+T G+L+TWG G N G LG S P V+ ++GL++ + CG T A+T
Sbjct: 555 AITADGELHTWGRG--NYGRLGHGSSEDQTTPMLVTA-LKGLKVIDVACGSGDAQTLAVT 611
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+++++GDG +G LG G P+ VE L++L V CG + A+ +
Sbjct: 612 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------- 664
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+G +++TWG G +LGHG E P + +A G + +ALT G+
Sbjct: 665 -DG----QVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGE 719
Query: 540 VFSMGSADYGQ-LGSPGSTGKFPTRIEG-NIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
V S GS D Q + S K P + G N KH I I+CG SS SE W
Sbjct: 720 VHSWGSNDKLQHFDTLFSNKKQPKALPGLNSKH--IVGISCGPGQSFSWSSCSE---WSV 774
Query: 598 G 598
G
Sbjct: 775 G 775
Score = 349 (127.9 bits), Expect = 7.4e-25, Sum P(2) = 7.4e-25
Identities = 82/251 (32%), Positives = 126/251 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + IACGS H+ +T G+++SWG G G+LGHG PKL+ L
Sbjct: 3086 PRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLL 3145
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VACG + T A+T G +++WGDG + G LG+ IP+ + ++ G
Sbjct: 3146 GHRVVQVACGSRDAQTLALTDEGMVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 3202
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG + A+T +G ++T+G G + LGHG P+ VE L+ K V + G
Sbjct: 3203 VCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGA 3262
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H A+ E ++F WGD GQ G+G P V+ + +V
Sbjct: 3263 LHCLAVTETG------------QVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3310
Query: 525 ACGHSITIALT 535
ACG S ++A T
Sbjct: 3311 ACGSSHSVAWT 3321
Score = 300 (110.7 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 82/279 (29%), Positives = 135/279 (48%)
Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
SG +Y WG HN G LG + +P + L+ + G A+T+ GKL
Sbjct: 3949 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPTEA-LATLRPVQLIGGEQTLFAVTADGKL 4004
Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
+ G G G LG G S S P +E+++ ++ V + G H A+ S G
Sbjct: 4005 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL--------SSEG 4056
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
+L++WG+ +G+LGHG+ P P ++ + +A G + + +TA+G++++
Sbjct: 4057 ----ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYT 4112
Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
G YG+LG S + P +E HR I D+ACGS ++ V++WG G
Sbjct: 4113 WGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI-DVACGSGDAQTLCLTDDDMVWSWGDGD 4171
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G+LG G ++ + P +++L V V CGS F+ A+
Sbjct: 4172 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4210
Score = 295 (108.9 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 65/184 (35%), Positives = 102/184 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EF 358
IACGS ++ +T G++ +WG G+ G+LGHG D + P L+ AL G + VACG +
Sbjct: 546 IACGSTYSAAITADGELHTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVIDVACGSGDA 605
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T AVT +G +++WGDG + G LG+ P+ V +++ L I +CCG + A+
Sbjct: 606 QTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVAL 662
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T G+++T+G G LGHG P+ +++L+ + V + G H A+ E S
Sbjct: 663 TKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKRVVDIAVGSTHCLALTEEGEVHS 722
Query: 479 -GSN 481
GSN
Sbjct: 723 WGSN 726
Score = 286 (105.7 bits), Expect = 4.4e-18, Sum P(2) = 4.4e-18
Identities = 69/197 (35%), Positives = 99/197 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D D L PK++E+ +ACGS A + +T ++SWG+G GKLG G
Sbjct: 4121 LGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGS 4180
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P ID+L G + V CG + A+T SG +YTWG G H LG G +
Sbjct: 4181 DGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRR-- 4237
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR+V G ++G ++ +I G H T G+++T+GD G LG G ++ PR V L
Sbjct: 4238 PRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL 4296
Query: 453 KELKTVMASCGVWHTAA 469
+ K +CG HT A
Sbjct: 4297 QGKKINRVACGSAHTLA 4313
Score = 277 (102.6 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 62/196 (31%), Positives = 101/196 (51%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK+++ + +ACGS+ A + +T +G +FSWG+G GKLG G
Sbjct: 3127 LGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGS 3186
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+ P+ I+ LNG + + CG + A+T SG ++TWG G + LG +++ P
Sbjct: 3187 EGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKG--DYFRLGHGTDVHVRKP 3244
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ V G + G +I + G H A+T G++F +GD G G+G + P V+ L+
Sbjct: 3245 QMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3303
Query: 454 ELKTVMASCGVWHTAA 469
K +CG H+ A
Sbjct: 3304 GQKITRVACGSSHSVA 3319
Score = 276 (102.2 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
Identities = 74/230 (32%), Positives = 115/230 (50%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
W T + +G ++ +G G LG + + VP E L L+ V G A+
Sbjct: 3942 W-TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT- 3999
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSI 530
++G KL+ G GA G+LG G E P ++ + KVA G
Sbjct: 4000 -------ADG----KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKH 4048
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
+AL++ G+++S G A+ G+LG + R+ +++ + DIA G H A +++
Sbjct: 4049 CLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASG 4108
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWGKG G+LGHGD+E++ P LVEAL+ +V V CGS +CL
Sbjct: 4109 ELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 4158
Score = 261 (96.9 bits), Expect = 3.7e-35, Sum P(2) = 3.7e-35
Identities = 79/231 (34%), Positives = 113/231 (48%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L +V+VAG
Sbjct: 2949 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2995
Query: 476 KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
+ ++++ K++ G+ G+LG G + + +P + + KVA G
Sbjct: 2996 GSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHA 3055
Query: 532 IALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
+ALT G+VFS G D G+LG S + K P IE +K + I DIACGS H A ++S
Sbjct: 3056 MALTVDGKVFSWGEGDDGKLGHFSRMNCDK-PRLIEA-LKTKRIRDIACGSSHSAAITSS 3113
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+Y+WG G G+LGHGDN + P LV+ L +V V CGS + L
Sbjct: 3114 GELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLAL 3164
Score = 234 (87.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 63/191 (32%), Positives = 95/191 (49%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVEA 334
SS D+ +L L+ V+D +ACGS A + VT+ GQ++SWG+G GKLG G
Sbjct: 577 SSEDQTTPMLVTALKGLKVID---VACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 633
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
PKL++ L +I V CG + A+T G +YTWG G + LG ++ H
Sbjct: 634 GCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR--LGHGTD-EHVRYP 690
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETL 452
K+ ++G ++ I G H A+T G++ ++G L H D S+ P+ + L
Sbjct: 691 KLLDSLQGKRVVDIAVGSTHCLALTEEGEVHSWGSND--KLQHFDTLFSNKKQPKALPGL 748
Query: 453 KELKTVMASCG 463
V SCG
Sbjct: 749 NSKHIVGISCG 759
Score = 228 (85.3 bits), Expect = 6.6e-12, Sum P(2) = 6.6e-12
Identities = 48/144 (33%), Positives = 79/144 (54%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P ++S L + CGS+ +V +TK G +++WG+G +LGHG + V P+ + L
Sbjct: 4185 VPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4244
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + +A G H T G++YTWGD ++ G LG + + PR V+ ++G +I
Sbjct: 4245 QGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKI 4301
Query: 406 SSICCGP-----WHTAAITSAGKL 424
+ + CG W T+ T+AGKL
Sbjct: 4302 NRVACGSAHTLAWSTSKPTNAGKL 4325
Score = 226 (84.6 bits), Expect = 8.9e-37, Sum P(2) = 8.9e-37
Identities = 47/139 (33%), Positives = 77/139 (55%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
PK++E LD + CGS+ +V +TK GQ+++WG+G +LGHG + V YPKL+D+L
Sbjct: 638 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQ 697
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + +A G H A+T G++++WG D + + L S P+ + G +
Sbjct: 698 GKRVVDIAVGSTHCLALTEEGEVHSWGSNDKLQHFDTL--FSNKKQ--PKALPG-LNSKH 752
Query: 405 ISSICCGPWHTAAITSAGK 423
I I CGP + + +S +
Sbjct: 753 IVGISCGPGQSFSWSSCSE 771
Score = 214 (80.4 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 43/120 (35%), Positives = 69/120 (57%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I CG++ ++ +TK G +++WG+G +LGHG + V P++++ L G I VA G H
Sbjct: 3206 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHC 3265
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
AVT +G ++ WGD H G G + + P V G +EG +I+ + CG H+ A T+
Sbjct: 3266 LAVTETGQVFAWGDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3322
Score = 37 (18.1 bits), Expect = 5.4e-40, Sum P(2) = 5.4e-40
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 53 YAGKEEKQLKLSHVSR 68
++G+ KQLK H S+
Sbjct: 2755 FSGRSGKQLKRHHSSQ 2770
Score = 37 (18.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 14/68 (20%), Positives = 32/68 (47%)
Query: 793 APSPISRKSSPACSITMNSFTDLANS-EVIFEYS---KQTNDNFNQEPDVLRAQLEDLTR 848
+P+P+ +K + S + + L N+ + +Y +F+Q L + + + +
Sbjct: 1580 SPAPVDKKQTTVKSAKQDKWQPLLNTIGSVQKYRWLRHSVQGSFSQSS--LMSTIVEFSL 1637
Query: 849 KSQFLEVE 856
K + L+VE
Sbjct: 1638 KEEPLDVE 1645
Score = 37 (18.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 18/99 (18%), Positives = 33/99 (33%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA- 334
+ +A+ R L +L + + S++ G + + + + G S E
Sbjct: 888 LPTAEERARALSSLLPNAASANEMSVSPGRRFMIDLLVSSLMADGGLESALNAAITAEIQ 947
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
D+ K + + H C TL DL G
Sbjct: 948 DIEAKKEAQKEKEIDEQEASASSLHRCRTTLDKDLINTG 986
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 494 (179.0 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 117/361 (32%), Positives = 189/361 (52%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R+ ++P S AQ + CG ++ G + + GEGS G+LG G D+ +
Sbjct: 4015 RNVMVPVAAPS--FSQAQQVVCGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTV 4072
Query: 342 IDALNGSNIHMV--ACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
I AL G + + +CG + H+ A+T SG++++WGDG + G LG + PR++
Sbjct: 4073 ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA 4130
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
++G ++ + CG H+A +T+ GKLFTFG+G +G LG G+ S+ +P V L+ +
Sbjct: 4131 -LQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4189
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
+CG+ HT A+ T GS ++ +GDG G+LG G++ + P V +
Sbjct: 4190 QVACGLNHTVAV-----STDGS------MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCG 4238
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDI 576
I KVACG ++ALT G V++ G +G P + R + + +IEDI
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDI 4298
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
A G+ H +SS +VY WG + GQLG G + + PTL+ L+ K ++ + G +A
Sbjct: 4299 AVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSA 4358
Query: 637 A 637
A
Sbjct: 4359 A 4359
Score = 429 (156.1 bits), Expect = 8.2e-35, Sum P(2) = 8.2e-35
Identities = 112/357 (31%), Positives = 181/357 (50%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
L PK+ S DAQ+I G +++ G + + G+GS G+LG G + S K +
Sbjct: 394 LQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 345 LNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+I V+ + HT A T G++++WGDG + G LG + + P+ + G ++
Sbjct: 452 EPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG--DYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + + G H+AA+T G+L+T+G+G FG LGHGD +S ++P V+ + + V S
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--S 567
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG HT A+ + G+T ++++G G G+LGHGD P ++ +
Sbjct: 568 CGSSHTIALSK-DGRT----------VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
KV G ++ALT+TGQV++ G GS +T P IE R + DI+ G
Sbjct: 617 RKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIV-DISIGDS 675
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
H +S +EVY WG + GQ G G++ T P V L ++ + G++ + A
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLA 732
Score = 370 (135.3 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 107/345 (31%), Positives = 173/345 (50%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
SI G A +V++ +++ WG S +L G + + PKL + S+ + G++
Sbjct: 359 SIQTGD--APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYC 414
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T ++ G + G G + LGL G + S ++SS HT A
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGL-GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKT 477
T+ G++F++GDG +G LGHG+ S+ P+ ++ + K V+ S G H+AA+ E
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE----- 528
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+G +L+TWG+G G+LGHGD+ R +P VK ++ +V+CG S TIAL+
Sbjct: 529 ---DG----ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKD 579
Query: 538 GQ-VFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ V+S G D G+LG G T + P IE ++ +I + GS ++S +VY
Sbjct: 580 GRTVWSFGGGDNGKLGH-GDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
WG GA LG G +E P L+E L ++ + G + A+
Sbjct: 638 WGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 348 (127.6 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 95/329 (28%), Positives = 166/329 (50%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
++ WG G G+L +V P + A + S V CG+ T + +G + G+G
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVP--VAAPSFSQAQQVVCGQNCTFVIQANGTVLACGEGS 4055
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGP-WHTAAITSAGKLFTFGDGTFG 433
+ G LGQ + + +S ++G ++ + CG H+ A+T +G++F++GDG +G
Sbjct: 4056 Y--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHG+ PR++E L+ + V SCG H+A + ++G KLFT+G+
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--------ADG----KLFTFGN 4160
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
G G+LG G+ + +P V + +VACG + T+A++ G V++ G DYG+LG
Sbjct: 4161 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLG 4220
Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG--HGDNE 609
ST K P +++ + I+ +ACG+ ++ VYT+G+ ++ +G G
Sbjct: 4221 LGNSTAKSSPQKVD-ILCGIGIKKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRAR 4279
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
N P V L ++ + G+ T A+
Sbjct: 4280 NHNRPQQVPVLSGVFIEDIAVGAEHTLAL 4308
Score = 318 (117.0 bits), Expect = 2.0e-19, Sum P(4) = 2.0e-19
Identities = 85/277 (30%), Positives = 142/277 (51%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
D+Y WG G H GQ++E + V+ Q + CG T I + G +
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPVAAPSFS-QAQQVVCGQNCTFVIQANGTVLAC 4051
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
G+G++G LG G+ V + L+ + ++ SCG H+ A+ E SG
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SG----- 4101
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
++F+WGDG G+LGHG+++ + P ++ +++CG + +TA G++F+ G
Sbjct: 4102 --EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4159
Query: 545 SADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
+ DYG+LG G+T K P R+ ++ I +ACG H +AV + S V+ +G G G
Sbjct: 4160 NGDYGRLGL-GNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYG 4217
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+LG G++ K +P V+ L +K V CG+ F+ A+
Sbjct: 4218 KLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4254
Score = 294 (108.6 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 86/296 (29%), Positives = 151/296 (51%)
Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y WG + H L + G +I + K++ Q +I G + T I++ G +
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKI---LQPKLAPSFSDAQ--TIEAGQYCTFVISTDGSVRA 426
Query: 427 FGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGL 483
G G++G LG GD ++ S +++ E + +K V +S G HT A T G
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT-----TEG---- 477
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVF 541
++F+WGDG G+LGHG++ + P ++ + + C V+ G+ + A+T G+++
Sbjct: 478 ---EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELY 533
Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGA 599
+ G D+G+LG S + PT ++ +I + + +++CGS H IA+ V+++G G
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
NG+LGHGD P ++EAL+ ++ V GS + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 268 (99.4 bits), Expect = 1.6e-13, Sum P(4) = 1.6e-13
Identities = 74/253 (29%), Positives = 124/253 (49%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ +E+ + ++CG KH+ +VT G++F++G G G+LG G ++ P+ + AL
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4184
Query: 347 GSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I VACG HT AV+ G + + +GDG + G LG + + P+KV + G+ I
Sbjct: 4185 GYQIGQVACGLNHTVAVSTDGSMVWAFGDG--DYGKLGLGNSTAKSSPQKVD-ILCGIGI 4241
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCG 463
+ CG + A+T G ++TFG + +G G + + P++V L + + G
Sbjct: 4242 KKVACGTQFSVALTKDGHVYTFGQVSDRLIGLPEGRARNHNRPQQVPVLSGVFIEDIAVG 4301
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
HT A+ S G ++ WG +EGQLG G P + V + +
Sbjct: 4302 AEHTLAL--------SSTG----DVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ 4349
Query: 524 VACGHSITIALTA 536
++ G + A TA
Sbjct: 4350 ISAGRCHSAAWTA 4362
Score = 229 (85.7 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 66/230 (28%), Positives = 113/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
WH ++ +G G G L R+ VP + + + V+ CG + +++
Sbjct: 3991 WHLGGKCD---VYLWGAGRHGQLAEAGRN-VMVPVAAPSFSQAQQVV--CGQ-NCTFVIQ 4043
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACGHS- 529
+NG + G+G+ G+LG G+++ V + ++ +CG
Sbjct: 4044 -------ANGT----VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ALT +G+VFS G DYG+LG S + P +IE ++ + ++CG H AVV++
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTA 4151
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+++T+G G G+LG G+ NK+ P V AL Q+ V CG N T A+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV 4201
Score = 180 (68.4 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EA 334
+ D PKV+E+ + + + GS+ ++ +T GQ+++WG G LG G EA
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEA 651
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-P 393
PKLI+ L + I ++ G+ H A++ ++Y WG+ +++G GQ + P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNSTGPITKP 709
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITS 420
+KVSG ++G+ I I G H+ A T+
Sbjct: 710 KKVSG-LDGVSIQQISAGTSHSLAWTA 735
Score = 49 (22.3 bits), Expect = 8.2e-35, Sum P(2) = 8.2e-35
Identities = 19/83 (22%), Positives = 37/83 (44%)
Query: 779 KISASPPGSRRVSRAPSPISRKS---SPACS--ITMNSFTDLANSEVIFEYSKQTNDNFN 833
++ PP S++ R + ++ + AC+ I ++ L S VI ++ K+ D
Sbjct: 1412 RLDDQPPQSQQERRISTDLTEGQDVYTAACNSVIHRSALLILGVSPVIEDFQKRREDGHL 1471
Query: 834 QEPDVLRAQLEDLTRKSQFLEVE 856
Q+P + L +S+ L E
Sbjct: 1472 QQPPSTAPEGIGLMTRSESLTAE 1494
Score = 42 (19.8 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 311 VTKQGQIFSWGEGSGGKLGHGV 332
+ + GQI + GSGGK G+G+
Sbjct: 2044 IVENGQILT--HGSGGK-GYGL 2062
Score = 40 (19.1 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 143 TQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
T +HV+S+ + D+ +T + ++Y N
Sbjct: 891 TSLQDHTHVASLLGYSSPSDTTETSSLCISYGN 923
Score = 40 (19.1 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 751 PKGKSYHASPSLN-GKFQ--WEPNSDFIK-SNKISASPPGSRRVSRAPSP 796
P S SPS G+ Q P+S + +N+ + S P SR +S +P P
Sbjct: 2702 PPISSLPTSPSDEVGRRQSLTSPDSQSARPTNRTALSDPSSR-LSTSPPP 2750
Score = 39 (18.8 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 80 RYPQPEKEY-QSFSLIYRNRSLDLICKDKD 108
RY QP K + + +Y+ RS L CK+ +
Sbjct: 1287 RY-QPGKALAEVYRCVYKVRSRLLACKNME 1315
Score = 38 (18.4 bits), Expect = 4.6e-32, Sum P(3) = 4.6e-32
Identities = 14/48 (29%), Positives = 19/48 (39%)
Query: 770 PNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLA 816
P++D + + S SP V A S S S+T DLA
Sbjct: 2838 PSADAAEMEEGFSESPDNMDHVDNAASASGPPSRSRSSVTRRHKFDLA 2885
Score = 38 (18.4 bits), Expect = 5.0e-19, Sum P(4) = 5.0e-19
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 361 CAVTLSGDLYTWGDGIHNLGLL--GQVSEISHW 391
C + +G + T G G GL G S W
Sbjct: 2042 CCIVENGQILTHGSGGKGYGLASTGVTSGCYQW 2074
Score = 37 (18.1 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 616 LVEALRDKQVKSVVCG 631
L+ L KQ++ +VCG
Sbjct: 4716 LLSLLTAKQLEQMVCG 4731
Score = 37 (18.1 bits), Expect = 1.9e-38, Sum P(4) = 1.9e-38
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 147 SPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRL 181
SPS LT+ DS +P + P +RL
Sbjct: 2710 SPSDEVGRRQSLTSPDSQSARPTNRTALSDPSSRL 2744
Score = 37 (18.1 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH----KGVSIADHSICSGC 655
G ++E++ P + E D + K+ C I H KG +A + SGC
Sbjct: 2019 GESEDEDENLP-IQEVSFDPE-KAQCCIVE-NGQILTHGSGGKGYGLASTGVTSGC 2071
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 489 (177.2 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 120/356 (33%), Positives = 182/356 (51%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E+ +L +A G + VT G++F+ G GSGG+LG G + P L+ +L
Sbjct: 4073 PTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQ 4132
Query: 347 GSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
+ VA G H A+T G++Y WG+G G LG + +S+ P+ V + G+
Sbjct: 4133 HVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED--GKLGHGNRMSYDRPKLVE-HLNGMS 4189
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
++ I CG H+AAIT++G + T+G G +G LGHGD P+ VE L + + +CG
Sbjct: 4190 VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG- 4248
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
+ + T N +++WGDG G+LG G ++ +P ++ + KV
Sbjct: 4249 ---SGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKV 4299
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH 582
CG ++ALT +G V++ G D+ +LG GS + P ++ ++ + I IA GS H
Sbjct: 4300 ECGSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLH 4357
Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S EVYTWG GQLG G Q P LV AL+ K + V CGS T A+
Sbjct: 4358 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 457 (165.9 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 115/342 (33%), Positives = 177/342 (51%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEF 358
IA GSK +V++ G++++ GEG+ G+LG GV +V P + L + VA G
Sbjct: 3024 IAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGK 3083
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
H A+TL G +++WG+G G LG + + PR V + +I + CG H+AAI
Sbjct: 3084 HALALTLDGKVFSWGEGED--GKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAI 3140
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW--HTAAIVEVAGK 476
+S G+L+T+G G +G LGHGD ++ P+ V L + V +CG T A+ E
Sbjct: 3141 SSQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE---- 3196
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
G+ +F+WGDG G+LG G +E P ++ I ++ CG ++ALT
Sbjct: 3197 -DGA-------VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTR 3248
Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G+V++ G DY +LG G + P I G ++ R + +A G+ H V+ +VY W
Sbjct: 3249 AGEVWTWGKGDYYRLGHGGDQHVRKPQPI-GGLRGRRVIHVAVGALHCLAVTDAGQVYAW 3307
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G +GQ G G+ + P LV L V V CGS+ + A
Sbjct: 3308 GDNDHGQQGSGNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 423 (154.0 bits), Expect = 2.8e-31, Sum P(3) = 2.8e-31
Identities = 106/301 (35%), Positives = 154/301 (51%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
LP VL VV ++ G KHA+ +T G++FSWGEG GKLGHG + P+L++AL
Sbjct: 3065 LP-VLRQYVVKKV-AVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL 3122
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
I VACG H+ A++ G+LYTWG G + G LG + P+ V+ + G ++
Sbjct: 3123 RAKKIRDVACGSSHSAAISSQGELYTWGLGEY--GRLGHGDNTTQLKPKLVTA-LAGRRV 3179
Query: 406 SSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
+ CG T A+T G +F++GDG FG LG G + P E+E L + V CG
Sbjct: 3180 VQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECG 3239
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+ A+ AG+ ++TWG G +LGHG + P +
Sbjct: 3240 AQFSLALTR-AGE-----------VWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIH 3287
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSY 581
VA G +A+T GQV++ G D+GQ GS G+T K P + G + ++ +ACGS
Sbjct: 3288 VAVGALHCLAVTDAGQVYAWGDNDHGQQGS-GNTFVNKKPALVIG-LDAVFVNRVACGSS 3345
Query: 582 H 582
H
Sbjct: 3346 H 3346
Score = 402 (146.6 bits), Expect = 4.7e-32, Sum P(2) = 4.7e-32
Identities = 110/333 (33%), Positives = 165/333 (49%)
Query: 317 IFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
I+ WG G+LG G+E + P +AL+ +A GE AVT G L+ G G
Sbjct: 4051 IYGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYG 4109
Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTFG 433
+ G LG V W + G ++ + + + G H A+T+ G+++ +G+G G
Sbjct: 4110 --SGGRLG-VGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDG 4166
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHG+R S P+ VE L + +CG H+AAI +S + TWG
Sbjct: 4167 KLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAIT------------ASGHVLTWGK 4214
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQL 551
G G+LGHGD+E ++ P V+ +ACG + T+ +T V+S G DYG+L
Sbjct: 4215 GRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKL 4274
Query: 552 GSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
G GS G K P +IE ++ + + CGS ++ VYTWGKG +LGHG ++
Sbjct: 4275 GRGGSDGCKLPYKIE-SLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4333
Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ P V AL+ K++ S+ GS A C G
Sbjct: 4334 VRRPKKVAALQGKKIISIATGSLHCVA-CSDSG 4365
Score = 399 (145.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 95/307 (30%), Positives = 151/307 (49%)
Query: 286 LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
+P +L S V + ++ G KH + +T +G++++WGEG GKLGHG PKL++
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
LNG ++ +ACG H+ A+T SG + TWG G + G LG P+ V + G
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4240
Query: 404 QISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
+ I CG T IT ++++GDG +G LG G +P ++E+L L V
Sbjct: 4241 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG + A+ + SG+ ++TWG G +LGHG + P V
Sbjct: 4301 CGSQFSVALTK-----SGA-------VYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
+A G +A + +G+V++ G D GQLG T R+ ++ ++I + CGS
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408
Query: 582 HIAVVSS 588
H +S+
Sbjct: 4409 HTLALST 4415
Score = 370 (135.3 bits), Expect = 1.4e-28, Sum P(2) = 1.4e-28
Identities = 108/329 (32%), Positives = 162/329 (49%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-IHMVACGEFHTCAVTLSGDLYTWGDG 375
+ WG +LG + V P ++ IH +A G V+ G +Y G+G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQDGKVYACGEG 3046
Query: 376 IHN---LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
+ LG+ V + H +P V Q +++ + G H A+T GK+F++G+G
Sbjct: 3047 TNGRLGLGVTHNVP-LPHQLP--VLRQYVVKKVA-VHSGGKHALALTLDGKVFSWGEGED 3102
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG+R++ PR VE L+ K +CG H+AAI S G +L+TWG
Sbjct: 3103 GKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAI--------SSQG----ELYTWG 3150
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMGSADYGQ 550
G G+LGHGD ++ P V +VACG + T+ALT G VFS G D+G+
Sbjct: 3151 LGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGK 3210
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G P IE + + I CG+ ++ EV+TWGKG +LGHG ++
Sbjct: 3211 LGRGGSEGSDTPHEIE-RLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQ 3269
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + P + LR ++V V G+ A+
Sbjct: 3270 HVRKPQPIGGLRGRRVIHVAVGALHCLAV 3298
Score = 354 (129.7 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 86/256 (33%), Positives = 129/256 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
PK++E + IACGS H+ +T G + +WG+G G+LGHG D PKL++AL
Sbjct: 4179 PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL 4238
Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G +ACG + T +T ++++WGDG + G LG+ +P K+ + GL
Sbjct: 4239 GYRAIDIACGSGDAQTLCITDDDNVWSWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLG 4295
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ + CG + A+T +G ++T+G G F LGHG P++V L+ K + + G
Sbjct: 4296 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 4355
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
H VA SG +++TWGD EGQLG G P V KV
Sbjct: 4356 LHC-----VACSDSG-------EVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKV 4403
Query: 525 ACGHSITIALTATGQV 540
CG + T+AL+ T Q+
Sbjct: 4404 TCGSAHTLALS-TSQL 4418
Score = 303 (111.7 bits), Expect = 3.1e-18, Sum P(3) = 3.1e-18
Identities = 72/198 (36%), Positives = 105/198 (53%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D D L PK++E+ + A IACGS A + +T ++SWG+G GKLG G
Sbjct: 4220 LGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGS 4279
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P I++L G + V CG + A+T SG +YTWG G H LG G V +
Sbjct: 4280 DGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRR-- 4336
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P+KV+ ++G +I SI G H A + +G+++T+GD G LG G ++ PR V L
Sbjct: 4337 PKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAAL 4395
Query: 453 KELKTVMASCGVWHTAAI 470
+ V +CG HT A+
Sbjct: 4396 QGKHIVKVTCGSAHTLAL 4413
Score = 282 (104.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 85/286 (29%), Positives = 138/286 (48%)
Query: 355 CGEFHTCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
C H A+ + + Y+WG G H LG G + +P K++ +E + S+ CG
Sbjct: 623 CEGRHFLAIDSNHNAYSWGTGEDHRLGH-GDTH--ARAVPTKIAA-LEQHCVQSVYCGCS 678
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW--HTAAIV 471
++AAIT G L T+G GT+ LGHG+ S+P V L + V + G H+ A+
Sbjct: 679 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 738
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
S GL +F WGDG G+LG+G+ + P+ V+ + +V G +
Sbjct: 739 --------SEGL----VFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFS 784
Query: 532 IALTATGQVFSMGSAD-YG-QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
+AL++ GQ+++ G A G QL G R+ +++H+ I D+A H +SS
Sbjct: 785 VALSSEGQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSS 844
Query: 590 SEVYTWGKGANGQLGHGDNENK---QTPTLVEALRDKQVKSVVCGS 632
EV+ WG+ + Q+ ++ +TP LV +L + C S
Sbjct: 845 GEVFGWGRNDSQQICPASVSSEPLLRTPILV-SLPTFPASGIACTS 889
Score = 260 (96.6 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 63/173 (36%), Positives = 90/173 (52%)
Query: 471 VEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--G 527
+ +AG + +S K++ G+G G+LG G +P + V KVA G
Sbjct: 3022 IHIAGGSKSLFIVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSG 3081
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ALT G+VFS G + G+LG T R+ ++ + I D+ACGS H A +S
Sbjct: 3082 GKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAIS 3141
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
S+ E+YTWG G G+LGHGDN + P LV AL ++V V CGS + L
Sbjct: 3142 SQGELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Score = 257 (95.5 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 71/224 (31%), Positives = 109/224 (48%)
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
A ++ +G G LG + S P E L L+ V + G A+
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTP-------- 4099
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
+G KLF G G+ G+LG G ++ +P + + KVA G +ALT G
Sbjct: 4100 DG----KLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155
Query: 539 QVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
+V++ G + G+LG G+ + P +E ++ + DIACGS H A +++ V TWG
Sbjct: 4156 EVYAWGEGEDGKLGH-GNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLTWG 4213
Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
KG G+LGHGD+E++ P LVEAL + + CGS +C+
Sbjct: 4214 KGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4257
Score = 245 (91.3 bits), Expect = 4.4e-12, Sum P(3) = 4.4e-12
Identities = 58/197 (29%), Positives = 96/197 (48%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVE 333
+ D L PK++ + +ACGS+ A + +T+ G +FSWG+G GKLG G
Sbjct: 3157 LGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGS 3216
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWI 392
P I+ L+G + + CG + A+T +G+++TWG G + LG G +
Sbjct: 3217 EGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGD-QHVRK-- 3273
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P+ + G + G ++ + G H A+T AG+++ +GD G G G+ P V L
Sbjct: 3274 PQPIGG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVIGL 3332
Query: 453 KELKTVMASCGVWHTAA 469
+ +CG H+ A
Sbjct: 3333 DAVFVNRVACGSSHSIA 3349
Score = 243 (90.6 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 79/267 (29%), Positives = 122/267 (45%)
Query: 300 SIA--CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
SIA C +H + + +SWG G +LGHG + P I AL + V CG
Sbjct: 618 SIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGC 677
Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS-SICCGPWHTA 416
++ A+T G+L TWG G + LG + +P V + + + ++ G H+
Sbjct: 678 SYSAAITCGGNLLTWGRGTY--ARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSL 735
Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
A+TS G +F +GDG +G LG+G+ + + P VE+L ++ V A G + A+
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFA--GSQFSVAL------ 787
Query: 477 TSGSNGLSSKKLFTWGDGA-EG-QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
S G +L+TWG G QL + VP V VA + +AL
Sbjct: 788 --SSEG----QLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLAL 841
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFP 561
+++G+VF G D Q+ P S P
Sbjct: 842 SSSGEVFGWGRNDSQQI-CPASVSSEP 867
Score = 233 (87.1 bits), Expect = 8.1e-11, Sum P(3) = 8.1e-11
Identities = 50/136 (36%), Positives = 77/136 (56%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
LP +ES L + CGS+ +V +TK G +++WG+G +LGHG V PK + AL
Sbjct: 4284 LPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAAL 4343
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I +A G H A + SG++YTWGD ++ G LG + + PR V+ ++G I
Sbjct: 4344 QGKKIISIATGSLHCVACSDSGEVYTWGD--NDEGQLGDGTVTAIQRPRLVAA-LQGKHI 4400
Query: 406 SSICCGPWHTAAITSA 421
+ CG HT A++++
Sbjct: 4401 VKVTCGSAHTLALSTS 4416
Score = 229 (85.7 bits), Expect = 6.3e-13, Sum P(2) = 6.3e-13
Identities = 56/174 (32%), Positives = 87/174 (50%)
Query: 471 VEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
+ +AG G + L S+ ++WG G + +LGHGD R VP + + V CG
Sbjct: 617 ISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCG 676
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHIA 584
S + A+T G + + G Y +LG S + PT + H + D+A GS H
Sbjct: 677 CSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVV-DVALGSGDAHSL 735
Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
++S+ V+ WG G G+LG+G+ P LVE+L +V+ V GS F+ A+
Sbjct: 736 ALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVAL 787
Score = 211 (79.3 bits), Expect = 1.8e-33, Sum P(2) = 1.8e-33
Identities = 62/188 (32%), Positives = 97/188 (51%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG-- 356
QS+ CG ++ +T G + +WG G+ +LGHG D S P L+ AL+ + VA G
Sbjct: 671 QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSG 730
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHT 415
+ H+ A+T G ++ WGDG + G LG + P V E L ++ + G +
Sbjct: 731 DAHSLALTSEGLVFAWGDG--DYGKLGNGNCNGSLQPILV----ESLPRVQRVFAGSQFS 784
Query: 416 AAITSAGKLFTFGDGTFGALGHG--DRS--STSVPREVETLKELKTVMASCGVWHTAAIV 471
A++S G+L+T+G T LGH +RS SVPR V +L+ + V + V H A+
Sbjct: 785 VALSSEGQLYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALS 842
Query: 472 EVAGKTSG 479
+G+ G
Sbjct: 843 S-SGEVFG 849
Score = 174 (66.3 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 46/157 (29%), Positives = 82/157 (52%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMG 544
KL+TW +L +AEP +P+ +V+ D+ F +A C +A+ + +S G
Sbjct: 592 KLYTW------RLAKPEAEP--LPM-EEVAHDV-FISIAGHCEGRHFLAIDSNHNAYSWG 641
Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
+ + +LG + + PT+I +H ++ + CG + A ++ + TWG+G +L
Sbjct: 642 TGEDHRLGHGDTHARAVPTKIAALEQH-CVQSVYCGCSYSAAITCGGNLLTWGRGTYARL 700
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHG+++++ PTLV AL D V V GS ++ L
Sbjct: 701 GHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 737
Score = 114 (45.2 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 54/202 (26%), Positives = 85/202 (42%)
Query: 276 ISSADRR-DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFS--WGEGSGGKLGHGV 332
IS DR L+P+ L + Q+ A S A Q +I++ W S + G
Sbjct: 501 ISHLDRMVQPLMPRCL----LRGGQATAASSSSA----PQQRIYALGWPSLSKDQQGFSA 552
Query: 333 EADVSYPKL---IDALNGS-NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI 388
E +S+ + L+ I VAC E ++ G LYTW L + E+
Sbjct: 553 EPTLSWSGESAGVPTLSCRFQIKQVACCETQMLILSQEGKLYTWRLAKPEAEPL-PMEEV 611
Query: 389 SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
+H + ++G EG H AI S +++G G LGHGD + +VP +
Sbjct: 612 AHDVFISIAGHCEGR----------HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTK 661
Query: 449 VETLKELKTVMASCGVWHTAAI 470
+ L++ CG ++AAI
Sbjct: 662 IAALEQHCVQSVYCGCSYSAAI 683
Score = 51 (23.0 bits), Expect = 4.2e-38, Sum P(2) = 4.2e-38
Identities = 8/43 (18%), Positives = 20/43 (46%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
+P+++ S +A H + ++ G++F WG ++
Sbjct: 816 VPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQI 858
Score = 46 (21.3 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 12/56 (21%), Positives = 23/56 (41%)
Query: 730 CKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPP 785
C E++ + S+ P+ S + PS N +SD ++ ++ S P
Sbjct: 2561 CANTIEEDTLPLASSASSHD-PEADSDNECPSSNSTTSSSTSSDTVEGQPMAVSGP 2615
Score = 44 (20.5 bits), Expect = 1.8e-15, Sum P(3) = 1.8e-15
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGE-----FHT-CAVTLSGDLYTWGDGIHNL 379
GKL V + S+P +D +N + + + E F + C+ D DG +
Sbjct: 3652 GKLPKPVMQESSHP-YVDNVNVTGVVRIPGAEMLRLEFDSQCSTEKRNDPLVIMDGTGRV 3710
Query: 380 GLLGQVSEISHWIPR-KVSG 398
+ E +HW P +V G
Sbjct: 3711 LAMRSGREFAHWAPEIRVLG 3730
Score = 40 (19.1 bits), Expect = 2.2e-15, Sum P(3) = 2.2e-15
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP 412
S ++H+ Q+ GL + +C GP
Sbjct: 1379 SRLTHFSSECALAQLLGLVANLMCSGP 1405
Score = 37 (18.1 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 30 YGRRGKPKFCPFRLSSDEKL 49
+GR + CP +SS+ L
Sbjct: 850 WGRNDSQQICPASVSSEPLL 869
Score = 37 (18.1 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 148 PSHVSSISSDLTNKDSGDTQPILVA 172
PS S+ SS T+ D+ + QP+ V+
Sbjct: 2590 PSSNSTTSSS-TSSDTVEGQPMAVS 2613
Score = 37 (18.1 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 16/56 (28%), Positives = 23/56 (41%)
Query: 761 SLNGK-FQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDL 815
S +G+ F W N S +I + S + R P +S + PA I S L
Sbjct: 842 SSSGEVFGWGRND----SQQICPASVSSEPLLRTPILVSLPTFPASGIACTSAQSL 893
Score = 37 (18.1 bits), Expect = 9.2e-13, Sum P(4) = 9.2e-13
Identities = 16/65 (24%), Positives = 33/65 (50%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
+ALL + + + + ++ + A+ + G+ S+G+ G LG ++AD+S L
Sbjct: 1158 EALLLQYMHALIPACVATLQKAHELALQCREPGEN-SFGQ-MVGHLGRVLQADISDALLN 1215
Query: 343 DALNG 347
+ L G
Sbjct: 1216 ELLVG 1220
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 438 (159.2 bits), Expect = 9.2e-38, P = 9.2e-38
Identities = 109/346 (31%), Positives = 167/346 (48%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + + + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI V+CGE HT A+ G +Y WG D LGLLG SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G D + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + SG+ +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
IACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 379 (138.5 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 99/328 (30%), Positives = 157/328 (47%)
Query: 320 WGEGSGGKLG-HGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+LG G++ ++ P+ D + V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
+LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 438 -GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G VPR +++L +++ V +CG +H+ A+ K S ++F WG
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL----SKAS--------EVFCWGQNKY 166
Query: 497 GQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GQLG G D + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++ P
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKG 643
V L V + CG T+A G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSG 314
Score = 301 (111.0 bits), Expect = 7.6e-23, P = 7.6e-23
Identities = 86/277 (31%), Positives = 130/277 (46%)
Query: 372 WGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
WG+ LGL G + E PRK S ++ + CG HT + G ++T G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH S P +V L V SCG HT A+ G +++
Sbjct: 62 DLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLAL--------NDKG----QVYA 107
Query: 491 WGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G YG
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG K P I+ + +++ +A G H V++ ++ WG+ GQLG D
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 220 (82.5 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 69/222 (31%), Positives = 104/222 (46%)
Query: 424 LFTFGDGTFGALGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
+ +G+ +FG LG G D PR+ + K CG+ HT +++ G+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGT- 54
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
++T G GQLGH + R P V D + V+CG + T+AL GQV+
Sbjct: 55 ------VYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVY 106
Query: 542 SMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
+ G GQLG GS + P I+ ++ I +ACG YH +S SEV+ WG+
Sbjct: 107 AWGLDSDGQLGLLGSEECIRVPRNIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 600 NGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAICL 640
GQLG G + KQ +P L+++L V G + + L
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/154 (30%), Positives = 72/154 (46%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +L+S I CG H +TK+G +F++G G G+LGH + P
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y++G G + G LG S + P V G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN--GQLGTGSTSNRKSPFTVKG 343
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
+ C + ++F+ GD +F
Sbjct: 344 NW--FPYNGQCPPDIDSEEYFCVKRIFSGGDQSF 375
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 438 (159.2 bits), Expect = 9.4e-38, P = 9.4e-38
Identities = 109/346 (31%), Positives = 167/346 (48%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + + + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI V+CGE HT A+ G +Y WG D LGLLG SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G D + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + SG+ +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
IACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 379 (138.5 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 99/328 (30%), Positives = 157/328 (47%)
Query: 320 WGEGSGGKLG-HGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+LG G++ ++ P+ D + V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
+LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 438 -GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G VPR +++L +++ V +CG +H+ A+ K S ++F WG
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL----SKAS--------EVFCWGQNKY 166
Query: 497 GQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GQLG G D + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++ P
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKG 643
V L V + CG T+A G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSG 314
Score = 301 (111.0 bits), Expect = 7.7e-23, P = 7.7e-23
Identities = 86/277 (31%), Positives = 130/277 (46%)
Query: 372 WGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
WG+ LGL G + E PRK S ++ + CG HT + G ++T G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH S P +V L V SCG HT A+ G +++
Sbjct: 62 DLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLAL--------NDKG----QVYA 107
Query: 491 WGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G YG
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG K P I+ + +++ +A G H V++ ++ WG+ GQLG D
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 220 (82.5 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 69/222 (31%), Positives = 104/222 (46%)
Query: 424 LFTFGDGTFGALGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
+ +G+ +FG LG G D PR+ + K CG+ HT +++ G+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGT- 54
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
++T G GQLGH + R P V D + V+CG + T+AL GQV+
Sbjct: 55 ------VYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVY 106
Query: 542 SMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
+ G GQLG GS + P I+ ++ I +ACG YH +S SEV+ WG+
Sbjct: 107 AWGLDSDGQLGLLGSEECIRVPRNIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 600 NGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAICL 640
GQLG G + KQ +P L+++L V G + + L
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 170 (64.9 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 47/154 (30%), Positives = 72/154 (46%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +L+S I CG H +TK+G +F++G G G+LGH + P
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y++G G + G LG S + P V G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN--GQLGTGSTSNRKSPFTVKG 343
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
+ C + ++F+ GD +F
Sbjct: 344 NW--FPYNGQCPPDIDSEEYFCVKRIFSGGDQSF 375
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 437 (158.9 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 109/346 (31%), Positives = 167/346 (48%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + + + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI V+CGE HT A+ G +Y WG D LGLLG SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G D + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + SG+ +F WG GQLG D R VP +
Sbjct: 189 GIPFMQIAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
IACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 378 (138.1 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 98/328 (29%), Positives = 157/328 (47%)
Query: 320 WGEGSGGKLG-HGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+LG G++ ++ P+ D + V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
+LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 438 -GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G VPR +++L +++ V +CG +H+ A+ K S ++F WG
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL----SKAS--------EVFCWGQNKY 166
Query: 497 GQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GQLG G D + + P +K I F ++A G + + LT +G +F G +GQLG
Sbjct: 167 GQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++ P
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKG 643
V L V + CG T+A G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSG 314
Score = 302 (111.4 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 87/277 (31%), Positives = 130/277 (46%)
Query: 372 WGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
WG+ LGL G + E PRK S ++ + CG HT + G ++T G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH S P +V L V SCG HT A+ G +++
Sbjct: 62 DLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLAL--------NDKG----QVYA 107
Query: 491 WGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G YG
Sbjct: 108 WGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG K P I+ + +++ IA G H V++ ++ WG+ GQLG D
Sbjct: 168 QLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 227 ENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263
Score = 219 (82.2 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 68/222 (30%), Positives = 104/222 (46%)
Query: 424 LFTFGDGTFGALGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
+ +G+ +FG LG G D PR+ + K CG+ HT +++ G+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD-----DGT- 54
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
++T G GQLGH + R P V D + V+CG + T+AL GQV+
Sbjct: 55 ------VYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVY 106
Query: 542 SMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
+ G GQLG GS + P I+ ++ I +ACG YH +S SEV+ WG+
Sbjct: 107 AWGLDSDGQLGLLGSEECIRVPRNIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 600 NGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAICL 640
GQLG G + KQ +P L+++L + G + + L
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTL 207
Score = 174 (66.3 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 47/154 (30%), Positives = 73/154 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +L+S I CG H +TK+G +F++G G G+LGH + P
Sbjct: 226 DENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y++G G + G LG S + P V G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN--GQLGTGSTSNRKSPFTVKG 343
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
+ C + + ++F+ GD +F
Sbjct: 344 NW--FPYNGQCPPDFDSEEYFCVKRIFSGGDQSF 375
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 435 (158.2 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 109/346 (31%), Positives = 166/346 (47%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + V + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI VACGE HT A+ G +Y WG D LGL G SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G D + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + SG+ +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
+ACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 386 (140.9 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 100/328 (30%), Positives = 157/328 (47%)
Query: 320 WGEGSGGKLG-HGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+LG G++ ++ P+ D + V CG HT V G +YT G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG- 436
+LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G VPR +++L +++ V +CG +H+ A+ K S ++F WG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL----SKAS--------EVFCWGQNKY 166
Query: 497 GQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GQLG G D + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++ P
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKG 643
V L V V CG T+A G
Sbjct: 287 KVFELMGSIVTQVACGRQHTSAFVPSSG 314
Score = 338 (124.0 bits), Expect = 7.5e-27, P = 7.5e-27
Identities = 89/276 (32%), Positives = 138/276 (50%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDA 344
+P+ ++S + +ACG H++ ++K ++F WG+ G+LG G++ + P+LI +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKS 186
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L G VA G H+ +TLSG ++ WG + G LG E ++P + + +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-ETLKELKTVMASCG 463
I ICCG HTAA+T G +FTFG G +G LGH S PR+V E + + T +A CG
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVA-CG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
HT+A V SS +++++G G GQLG G R P VK + S+
Sbjct: 303 RQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GNWFSY-N 349
Query: 524 VACGHSI-TIALTATGQVFSMGSADYGQLGSPGSTG 558
C I + ++FS G + SP + G
Sbjct: 350 GQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQNCG 385
Score = 302 (111.4 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 84/277 (30%), Positives = 131/277 (47%)
Query: 372 WGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
WG+ + LGL G + E PR+ S ++ + CG HT + G ++T G
Sbjct: 4 WGNASYGQLGL-GGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH S P +V L V +CG HT A+ G +++
Sbjct: 62 DLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLAL--------NDKG----QVYA 107
Query: 491 WGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G YG
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG K P I+ + +++ +A G H V++ ++ WG+ GQLG D
Sbjct: 168 QLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 193 (73.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 51/155 (32%), Positives = 78/155 (50%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHSITIALTATGQVFSMG 544
+ WG+ + GQLG G + +V L + SD KV CG T+ + G V++ G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIV-LEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
D GQLG S K P ++ + + I +ACG H ++ K +VY WG ++GQLG
Sbjct: 60 CNDLGQLGHEKSRKK-PEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 605 -HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G E + P +++L D Q+ V CG + A+
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL 152
Score = 168 (64.2 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 43/120 (35%), Positives = 61/120 (50%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +L+S I CG H +TK+G +F++G G G+LGH + P
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + VACG HT A V SG +Y++G G + G LG S + P V G
Sbjct: 286 RKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN--GQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 435 (158.2 bits), Expect = 2.0e-37, P = 2.0e-37
Identities = 108/346 (31%), Positives = 168/346 (48%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + + + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI V+CGE HT A+ G +Y WG D LGL+G SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G D + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + SG+ +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
+IACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 378 (138.1 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 99/328 (30%), Positives = 157/328 (47%)
Query: 320 WGEGSGGKLG-HGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+LG G++ ++ P+ D + V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
+LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 438 -GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G VPR +++L +++ V +CG +H+ A+ K S ++F WG
Sbjct: 119 VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL----SKAS--------EVFCWGQNKY 166
Query: 497 GQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GQLG G D + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 167 GQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++ P
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKG 643
V L V + CG T+A G
Sbjct: 287 KVFELMGSIVTEIACGRQHTSAFVPSSG 314
Score = 302 (111.4 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 84/277 (30%), Positives = 131/277 (47%)
Query: 372 WGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
WG+ LGL G + E PRK S ++ + CG HT + G ++T G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH S P +V L V SCG HT A+ G +++
Sbjct: 62 DLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLAL--------NDKG----QVYA 107
Query: 491 WGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG ++GQLG +E + VP +K DI +VACG+ ++AL+ +VF G YG
Sbjct: 108 WGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG K P ++ + +++ +A G H V++ ++ WG+ GQLG D
Sbjct: 168 QLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 222 (83.2 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 69/222 (31%), Positives = 104/222 (46%)
Query: 424 LFTFGDGTFGALGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
+ +G+ +FG LG G D PR+ + + CG+ HT +++ G+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD-----DGT- 54
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
++T G GQLGH + R P V D + V+CG + T+AL GQV+
Sbjct: 55 ------VYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVY 106
Query: 542 SMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
+ G GQLG GS + P I+ ++ I +ACG YH +S SEV+ WG+
Sbjct: 107 AWGLDSDGQLGLVGSEECIRVPRNIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 600 NGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAICL 640
GQLG G + KQT P L+++L V G + + L
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207
Score = 167 (63.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/154 (30%), Positives = 72/154 (46%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +L+S I CG H +TK+G +F++G G G+LGH + P
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y++G G + G LG S + P V G
Sbjct: 286 RKVFELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN--GQLGTGSTSNRKSPFTVKG 343
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
+ C + ++F+ GD +F
Sbjct: 344 NW--YPYNGQCLPDIDSEEYFCVKRIFSGGDQSF 375
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 475 (172.3 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 117/361 (32%), Positives = 187/361 (51%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R+ ++P S AQ + CG ++ G + + GEGS G+LG G D+ +
Sbjct: 3272 RNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTV 3329
Query: 342 IDALNGSNIHMV--ACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
I AL G + + +CG + H+ A+T SG++++WGDG + G LG + PR++
Sbjct: 3330 ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA 3387
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
++G ++ + CG H+A +TS GKLFTFG+G +G LG G+ S+ +P V L+ +
Sbjct: 3388 -LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 3446
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
+CG+ HT A+ GS ++ +GDG G+LG G++ + P V V
Sbjct: 3447 QVACGLNHTLAV-----SADGS------MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG 3495
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDI 576
I KVACG ++ALT G V++ G +G P + R + + IED+
Sbjct: 3496 IGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDV 3553
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
A G+ H ++S +VY WG + GQLG G + + PTLV L+ K ++ + G +A
Sbjct: 3554 AVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSA 3613
Query: 637 A 637
A
Sbjct: 3614 A 3614
Score = 350 (128.3 bits), Expect = 1.1e-22, Sum P(4) = 1.1e-22
Identities = 96/327 (29%), Positives = 162/327 (49%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
++ WG G G+L +V P + S V CG+ T + +G + G+G
Sbjct: 3256 VYLWGAGRHGQLAEAGR-NVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGEGS 3312
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGP-WHTAAITSAGKLFTFGDGTFG 433
+ G LGQ + + +S ++G ++ + CG H+ A+T +G++F++GDG +G
Sbjct: 3313 Y--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 3369
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHG+ PR++E L+ + V SCG H+A + S+G KLFT+G+
Sbjct: 3370 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--------SDG----KLFTFGN 3417
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
G G+LG G+ + +P V + +VACG + T+A++A G V++ G DYG+LG
Sbjct: 3418 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 3477
Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
ST K P +++ + I+ +ACG+ ++ VYT+G+ L G N
Sbjct: 3478 LGNSTAKSSPQKVDV-LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 3536
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P + L ++ V G+ T A+
Sbjct: 3537 NRPQQIPVLAGVVIEDVAVGAEHTLAL 3563
Score = 311 (114.5 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 83/277 (29%), Positives = 141/277 (50%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
D+Y WG G H GQ++E + + Q + CG T I + G +
Sbjct: 3255 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 3308
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
G+G++G LG G+ V + L+ + ++ SCG H+ A+ E SG
Sbjct: 3309 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SG----- 3358
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
++F+WGDG G+LGHG+++ + P ++ +++CG + +T+ G++F+ G
Sbjct: 3359 --EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 3416
Query: 545 SADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
+ DYG+LG G+T K P R+ ++ I +ACG H +AV + S V+ +G G G
Sbjct: 3417 NGDYGRLGL-GNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 3474
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+LG G++ K +P V+ L +K V CG+ F+ A+
Sbjct: 3475 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 3511
Score = 278 (102.9 bits), Expect = 5.7e-15, Sum P(4) = 5.7e-15
Identities = 74/251 (29%), Positives = 122/251 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ +E+ + ++CG KH+ +VT G++F++G G G+LG G ++ P+ + AL
Sbjct: 3382 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 3441
Query: 347 GSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I VACG HT AV+ G + + +GDG + G LG + + P+KV + G+ I
Sbjct: 3442 GYQIGQVACGLNHTLAVSADGSMVWAFGDG--DYGKLGLGNSTAKSSPQKVD-VLCGIGI 3498
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ CG + A+T G ++TFG L G + + P+++ L + + G
Sbjct: 3499 KKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAE 3558
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
HT A+ S G ++ WG +EGQLG G P V V + +++
Sbjct: 3559 HTLALA--------STG----DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQIS 3606
Query: 526 CGHSITIALTA 536
G + A TA
Sbjct: 3607 AGRCHSAAWTA 3617
Score = 233 (87.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 67/230 (29%), Positives = 113/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
WH ++ +G G G L R+ VP + + + V+ CG + +++
Sbjct: 3248 WHLGGKCD---VYLWGAGRHGQLAEAGRN-VMVPAAAPSFSQAQQVI--CGQ-NCTFVIQ 3300
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACGHS- 529
+NG + G+G+ G+LG G+++ V + ++ +CG
Sbjct: 3301 -------ANGT----VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 3349
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ALT +G+VFS G DYG+LG S + P +IE ++ + ++CG H AVV+S
Sbjct: 3350 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTS 3408
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+++T+G G G+LG G+ NK+ P V AL Q+ V CG N T A+
Sbjct: 3409 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 3458
Score = 52 (23.4 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 326 GKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVT 364
G+ G G ++ PK + L+G I ++ G H+ A T
Sbjct: 2 GQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWT 41
Score = 40 (19.1 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 80 RYPQPEKEYQS-FSLIYRNRSLDLICKDKDEAELWFTALRALISED 124
RY QP K + +Y+ RS L CK+ + + ++ ISE+
Sbjct: 593 RY-QPGKSLSEVYRCVYKVRSRLLACKNLELIQTRSSSRDRWISEN 637
Score = 37 (18.1 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 616 LVEALRDKQVKSVVCG 631
L+ L KQ++ +VCG
Sbjct: 3971 LLSLLTAKQLEQMVCG 3986
Score = 37 (18.1 bits), Expect = 2.3e-37, Sum P(3) = 2.3e-37
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 143 TQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
T +HV+S+ + D+ D + Y N
Sbjct: 198 TSLQDHTHVASLLGYSSPSDAADLSSVCTGYGN 230
Score = 37 (18.1 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 147 SPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRL 181
SPS LT+ DS +P + P +RL
Sbjct: 1974 SPSDEVGRRQSLTSPDSQSARPANRTALSDPSSRL 2008
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 476 (172.6 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 118/361 (32%), Positives = 187/361 (51%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R+ ++P S AQ + CG ++ G + + GEGS G+LG G D+ +
Sbjct: 4010 RNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTV 4067
Query: 342 IDALNGSNIHMV--ACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
I AL G + + +CG + H+ A+T SG++++WGDG + G LG + PR++
Sbjct: 4068 ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA 4125
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
++G ++ + CG H+A +TS GKLFTFG+G +G LG G+ S+ +P V L+ +
Sbjct: 4126 -LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4184
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
+CG+ HT A+ GS ++ +GDG G+LG G++ + P V V
Sbjct: 4185 QVACGLNHTLAV-----SADGS------MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG 4233
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDI 576
I KVACG ++ALT G V++ G +G P + R + + IED+
Sbjct: 4234 IGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDV 4291
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
A G+ H ++S +VY WG + GQLG G + + PTLV L+ K V+ + G +A
Sbjct: 4292 AVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSA 4351
Query: 637 A 637
A
Sbjct: 4352 A 4352
Score = 427 (155.4 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 112/357 (31%), Positives = 181/357 (50%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
L PK+ S DAQ+I G +++ G + + G+GS G+LG G + S K +
Sbjct: 394 LQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 345 LNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+I V+ + HT A T G++++WGDG + G LG + + P+ + G ++
Sbjct: 452 EPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG--DYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + + G H+AA+T G+L+T+G+G FG LGHGD +S ++P V+ + + V S
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--S 567
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG HT A+ + G+T ++++G G G+LGHGD P ++ +
Sbjct: 568 CGSSHTIALSK-DGRT----------VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
KV G ++ALT+TGQV++ G GS +T P IE R + DI+ G
Sbjct: 617 RKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIV-DISIGDS 675
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
H +S +EVY WG + GQ G G++ T P V L ++ + G++ + A
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 367 (134.2 bits), Expect = 8.5e-27, Sum P(2) = 8.5e-27
Identities = 103/335 (30%), Positives = 169/335 (50%)
Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
+V++ +++ WG S +L G + + PKL + S+ + G++ T ++ G +
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTDGSV 424
Query: 370 YTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
G G + LGL G + S ++SS HT A T+ G++F++G
Sbjct: 425 RACGKGSYGRLGL-GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWG 483
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKK 487
DG +G LGHG+ S+ P+ ++ + K V+ S G H+AA+ E +G +
Sbjct: 484 DGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE--------DG----E 531
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSA 546
L+TWG+G G+LGHGD+ R +P VK ++ +V+CG S TIAL+ G+ V+S G
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKDGRTVWSFGGG 589
Query: 547 DYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
D G+LG G T + P IE ++ +I + GS ++S +VY WG GA LG
Sbjct: 590 DNGKLGH-GDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645
Query: 605 HGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G +E P L+E L ++ + G + A+
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 350 (128.3 bits), Expect = 6.9e-23, Sum P(4) = 6.9e-23
Identities = 96/327 (29%), Positives = 162/327 (49%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
++ WG G G+L +V P + S V CG+ T + +G + G+G
Sbjct: 3994 VYLWGAGRHGQLAEAGR-NVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGEGS 4050
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGP-WHTAAITSAGKLFTFGDGTFG 433
+ G LGQ + + +S ++G ++ + CG H+ A+T +G++F++GDG +G
Sbjct: 4051 Y--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4107
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHG+ PR++E L+ + V SCG H+A + S+G KLFT+G+
Sbjct: 4108 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--------SDG----KLFTFGN 4155
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
G G+LG G+ + +P V + +VACG + T+A++A G V++ G DYG+LG
Sbjct: 4156 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4215
Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
ST K P +++ + I+ +ACG+ ++ VYT+G+ L G N
Sbjct: 4216 LGNSTAKSSPQKVDV-LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4274
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P + L ++ V G+ T A+
Sbjct: 4275 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4301
Score = 311 (114.5 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 83/277 (29%), Positives = 141/277 (50%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
D+Y WG G H GQ++E + + Q + CG T I + G +
Sbjct: 3993 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4046
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
G+G++G LG G+ V + L+ + ++ SCG H+ A+ E SG
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SG----- 4096
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
++F+WGDG G+LGHG+++ + P ++ +++CG + +T+ G++F+ G
Sbjct: 4097 --EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4154
Query: 545 SADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
+ DYG+LG G+T K P R+ ++ I +ACG H +AV + S V+ +G G G
Sbjct: 4155 NGDYGRLGL-GNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4212
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+LG G++ K +P V+ L +K V CG+ F+ A+
Sbjct: 4213 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249
Score = 295 (108.9 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 88/304 (28%), Positives = 155/304 (50%)
Query: 360 TCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T V+ + ++Y WG + H L + G +I + K++ Q +I G + T I
Sbjct: 365 TPIVSETCEVYVWGSNSSHQL-VEGTQEKI---LQPKLAPSFSDAQ--TIEAGQYCTFVI 418
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAG 475
++ G + G G++G LG GD ++ S +++ E + +K V +S G HT A
Sbjct: 419 STDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT---- 474
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIA 533
T G ++F+WGDG G+LGHG++ + P ++ + + C V+ G+ + A
Sbjct: 475 -TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAA 525
Query: 534 LTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSE 591
+T G++++ G D+G+LG S + PT ++ +I + + +++CGS H IA+
Sbjct: 526 VTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRT 582
Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSI 651
V+++G G NG+LGHGD P ++EAL+ ++ V GS + A+ V
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642
Query: 652 CSGC 655
C GC
Sbjct: 643 CLGC 646
Score = 277 (102.6 bits), Expect = 1.4e-14, Sum P(4) = 1.4e-14
Identities = 74/251 (29%), Positives = 122/251 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ +E+ + ++CG KH+ +VT G++F++G G G+LG G ++ P+ + AL
Sbjct: 4120 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4179
Query: 347 GSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I VACG HT AV+ G + + +GDG + G LG + + P+KV + G+ I
Sbjct: 4180 GYQIGQVACGLNHTLAVSADGSMVWAFGDG--DYGKLGLGNSTAKSSPQKVD-VLCGIGI 4236
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ CG + A+T G ++TFG L G + + P+++ L + + G
Sbjct: 4237 KKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAE 4296
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
HT A+ S G ++ WG +EGQLG G P V V + +++
Sbjct: 4297 HTLALA--------STG----DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQIS 4344
Query: 526 CGHSITIALTA 536
G + A TA
Sbjct: 4345 AGRCHSAAWTA 4355
Score = 233 (87.1 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 67/230 (29%), Positives = 113/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
WH ++ +G G G L R+ VP + + + V+ CG + +++
Sbjct: 3986 WHLGGKCD---VYLWGAGRHGQLAEAGRN-VMVPAAAPSFSQAQQVI--CGQ-NCTFVIQ 4038
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACGHS- 529
+NG + G+G+ G+LG G+++ V + ++ +CG
Sbjct: 4039 -------ANGT----VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4087
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ALT +G+VFS G DYG+LG S + P +IE ++ + ++CG H AVV+S
Sbjct: 4088 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTS 4146
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+++T+G G G+LG G+ NK+ P V AL Q+ V CG N T A+
Sbjct: 4147 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4196
Score = 180 (68.4 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EA 334
+ D PKV+E+ + + + GS+ ++ +T GQ+++WG G LG G EA
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEA 651
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-P 393
PKLI+ L + I ++ G+ H A++ ++Y WG+ +++G GQ + P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNSTGPITKP 709
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITS 420
+KVSG ++G+ I I G H+ A T+
Sbjct: 710 KKVSG-LDGIAIQQISAGTSHSLAWTA 735
Score = 42 (19.8 bits), Expect = 6.9e-23, Sum P(4) = 6.9e-23
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 311 VTKQGQIFSWGEGSGGKLGHGV 332
+ + GQI + GSGGK G+G+
Sbjct: 2041 IVENGQILT--HGSGGK-GYGL 2059
Score = 40 (19.1 bits), Expect = 1.9e-36, Sum P(4) = 1.9e-36
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 80 RYPQPEKEYQS-FSLIYRNRSLDLICKDKDEAELWFTALRALISED 124
RY QP K + +Y+ RS L CK+ + + ++ ISE+
Sbjct: 1286 RY-QPGKSLSEVYRCVYKVRSRLLACKNLELIQTRSSSRDRWISEN 1330
Score = 40 (19.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 751 PKGKSYHASPSLN-GKFQ--WEPNSDFIK-SNKISASPPGSRRVSRAPSP 796
P S SPS G+ Q P+S + +N+ + S P SR +S +P P
Sbjct: 2697 PPISSLPTSPSDEVGRRQSLTSPDSQSARPTNRTALSDPSSR-LSTSPPP 2745
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVY 593
+KH + ACG S SEVY
Sbjct: 1272 LKHTNLLSQACGESRYQPGKSLSEVY 1297
Score = 39 (18.8 bits), Expect = 1.5e-33, Sum P(2) = 1.5e-33
Identities = 17/78 (21%), Positives = 34/78 (43%)
Query: 784 PPGSRRVSRAPSPISRKS---SPACSITMN--SFTDLANSEVIFEYSKQTNDNFNQEPDV 838
PP +++ R + + + AC+ ++ + L S VI E K+ + Q+P
Sbjct: 1418 PPQAQQERRVSTDLPEGQDVYTAACNSVIHRCALLILGVSPVIEELQKRREEGQLQQPST 1477
Query: 839 LRAQLEDLTRKSQFLEVE 856
++ L +S+ L E
Sbjct: 1478 STSEGGGLMTRSESLTAE 1495
Score = 38 (18.4 bits), Expect = 2.8e-18, Sum P(4) = 2.8e-18
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 361 CAVTLSGDLYTWGDGIHNLGLL--GQVSEISHW 391
C + +G + T G G GL G S W
Sbjct: 2039 CCIVENGQILTHGSGGKGYGLASTGVTSGCYQW 2071
Score = 37 (18.1 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 616 LVEALRDKQVKSVVCG 631
L+ L KQ++ +VCG
Sbjct: 4710 LLSLLTAKQLEQMVCG 4725
Score = 37 (18.1 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 143 TQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
T +HV+S+ + D+ D + Y N
Sbjct: 891 TSLQDHTHVASLLGYSSPSDAADLSSVCTGYGN 923
Score = 37 (18.1 bits), Expect = 1.9e-36, Sum P(4) = 1.9e-36
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 147 SPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRL 181
SPS LT+ DS +P + P +RL
Sbjct: 2705 SPSDEVGRRQSLTSPDSQSARPTNRTALSDPSSRL 2739
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 476 (172.6 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 117/361 (32%), Positives = 187/361 (51%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R+ ++P S AQ + CG ++ G + + GEGS G+LG G D+ +
Sbjct: 4015 RNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTV 4072
Query: 342 IDALNGSNIHMV--ACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
I AL G + + +CG + H+ A+T SG++++WGDG + G LG + PR++
Sbjct: 4073 ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA 4130
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
++G ++ + CG H+A +TS GKLFTFG+G +G LG G+ S+ +P V L+ +
Sbjct: 4131 -LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4189
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
+CG+ HT A+ GS ++ +GDG G+LG G++ + P + V
Sbjct: 4190 QVACGLNHTLAV-----SADGS------MVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG 4238
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDI 576
I KVACG ++ALT G V++ G +G P + R + + IED+
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVIIEDV 4296
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
A G+ H ++S +VY WG + GQLG G + + PTLV L+ K V+ + G +A
Sbjct: 4297 AVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSA 4356
Query: 637 A 637
A
Sbjct: 4357 A 4357
Score = 426 (155.0 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 111/357 (31%), Positives = 181/357 (50%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
L PK+ S DAQ+I G +++ G + + G+GS G+LG G + S K +
Sbjct: 394 LQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 345 LNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+I V+ + HT A T G++++WGDG + G LG + + P+ + G ++
Sbjct: 452 EPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG--DYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + + G H+AA+T G+L+T+G+G FG LGHGD +S ++P V+ + + V S
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--S 567
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG HT A+ + G+T ++++G G G+LGHGD P ++ +
Sbjct: 568 CGSSHTIALSK-DGRT----------VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
KV G ++ALT+TGQV++ G GS +T P IE R + D++ G
Sbjct: 617 RKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIV-DVSIGDS 675
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
H +S +EVY WG + GQ G G++ T P V L ++ + G++ + A
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 371 (135.7 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 108/345 (31%), Positives = 173/345 (50%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
SI G A +V++ +++ WG S +L G + + PKL + S+ + G++
Sbjct: 359 SIQTGD--APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYC 414
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T ++ G + G G + LGL G + S ++SS HT A
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGL-GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKT 477
T+ G++F++GDG +G LGHG+ S+ P+ ++ + K V+ S G H+AA+ E
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE----- 528
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+G +L+TWG+G G+LGHGD+ R +P VK ++ +V+CG S TIAL+
Sbjct: 529 ---DG----ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKD 579
Query: 538 GQ-VFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ V+S G D G+LG G T + P IE ++ +I + GS ++S +VY
Sbjct: 580 GRTVWSFGGGDNGKLGH-GDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
WG GA LG G +E P L+E L ++ V G + A+
Sbjct: 638 WGCGAC--LGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLAL 680
Score = 350 (128.3 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 97/327 (29%), Positives = 162/327 (49%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
++ WG G G+L +V P + S V CG+ T + +G + G+G
Sbjct: 3999 VYLWGAGRHGQLAEAGR-NVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGEGS 4055
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGP-WHTAAITSAGKLFTFGDGTFG 433
+ G LGQ + + +S ++G ++ + CG H+ A+T +G++F++GDG +G
Sbjct: 4056 Y--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4112
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHG+ PR++E L+ + V SCG H+A + S+G KLFT+G+
Sbjct: 4113 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--------SDG----KLFTFGN 4160
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
G G+LG G+ + +P V + +VACG + T+A++A G V++ G DYG+LG
Sbjct: 4161 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4220
Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
ST K P +I+ + I+ +ACG+ ++ VYT+G+ L G N
Sbjct: 4221 LGNSTAKSSPQKIDV-LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4279
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P + L ++ V G+ T A+
Sbjct: 4280 NRPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Score = 310 (114.2 bits), Expect = 4.5e-18, Sum P(4) = 4.5e-18
Identities = 82/277 (29%), Positives = 141/277 (50%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
D+Y WG G H GQ++E + + Q + CG T I + G +
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4051
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
G+G++G LG G+ V + L+ + ++ SCG H+ A+ E SG
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SG----- 4101
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
++F+WGDG G+LGHG+++ + P ++ +++CG + +T+ G++F+ G
Sbjct: 4102 --EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159
Query: 545 SADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
+ DYG+LG G+T K P R+ ++ I +ACG H +AV + S V+ +G G G
Sbjct: 4160 NGDYGRLGL-GNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+LG G++ K +P ++ L +K V CG+ F+ A+
Sbjct: 4218 KLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 294 (108.6 bits), Expect = 8.5e-18, Sum P(3) = 8.5e-18
Identities = 86/296 (29%), Positives = 151/296 (51%)
Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y WG + H L + G +I + K++ Q +I G + T I++ G +
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKI---LQPKLAPSFSDAQ--TIEAGQYCTFVISTDGSVRA 426
Query: 427 FGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGL 483
G G++G LG GD ++ S +++ E + +K V +S G HT A T G
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT-----TEG---- 477
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVF 541
++F+WGDG G+LGHG++ + P ++ + + C V+ G+ + A+T G+++
Sbjct: 478 ---EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELY 533
Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGA 599
+ G D+G+LG S + PT ++ +I + + +++CGS H IA+ V+++G G
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
NG+LGHGD P ++EAL+ ++ V GS + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 274 (101.5 bits), Expect = 3.0e-14, Sum P(4) = 3.0e-14
Identities = 73/251 (29%), Positives = 122/251 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ +E+ + ++CG KH+ +VT G++F++G G G+LG G ++ P+ + AL
Sbjct: 4125 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4184
Query: 347 GSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I VACG HT AV+ G + + +GDG + G LG + + P+K+ + G+ I
Sbjct: 4185 GYQIGQVACGLNHTLAVSADGSMVWAFGDG--DYGKLGLGNSTAKSSPQKID-VLCGIGI 4241
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ CG + A+T G ++TFG L G + + P+++ L + + G
Sbjct: 4242 KKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAE 4301
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
HT A+ SNG ++ WG +EGQLG G P V + +++
Sbjct: 4302 HTLALA--------SNG----DVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQIS 4349
Query: 526 CGHSITIALTA 536
G + A TA
Sbjct: 4350 AGRCHSAAWTA 4360
Score = 233 (87.1 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 67/230 (29%), Positives = 113/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
WH ++ +G G G L R+ VP + + + V+ CG + +++
Sbjct: 3991 WHLGGKCD---VYLWGAGRHGQLAEAGRN-VMVPAAAPSFSQAQQVI--CGQ-NCTFVIQ 4043
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACGHS- 529
+NG + G+G+ G+LG G+++ V + ++ +CG
Sbjct: 4044 -------ANGT----VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4092
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ALT +G+VFS G DYG+LG S + P +IE ++ + ++CG H AVV+S
Sbjct: 4093 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTS 4151
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+++T+G G G+LG G+ NK+ P V AL Q+ V CG N T A+
Sbjct: 4152 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4201
Score = 181 (68.8 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 46/147 (31%), Positives = 78/147 (53%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EA 334
+ D PKV+E+ + + + GS+ ++ +T GQ+++WG G LG G EA
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEA 651
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-P 393
PKLI+ L + I V+ G+ H A++ ++Y WG+ +++G GQ + P
Sbjct: 652 TALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNSTGPITKP 709
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITS 420
+KVSG ++G+ I I G H+ A T+
Sbjct: 710 KKVSG-LDGIAIQQISAGTSHSLAWTA 735
Score = 47 (21.6 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 710 TSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSL 762
+ E G Q P + S L + + +++ S+S T +S+ + S+ P+L
Sbjct: 2422 SEEKGDVEQKPESESAL--DMRTGLTSDDVKSQSTTSSKSENEIASFSLDPTL 2472
Score = 42 (19.8 bits), Expect = 9.4e-34, Sum P(2) = 9.4e-34
Identities = 18/78 (23%), Positives = 34/78 (43%)
Query: 784 PPGSRRVSRAPSPISRKS---SPACSITMN--SFTDLANSEVIFEYSKQTNDNFNQEPDV 838
PP S++ R + + + AC+ ++ + L S VI E K+ + Q+P
Sbjct: 1418 PPQSQQERRVSTDLPEGQDVYTAACNSVIHRCALLILGVSPVIDELQKRREEGQLQQPST 1477
Query: 839 LRAQLEDLTRKSQFLEVE 856
++ L +S+ L E
Sbjct: 1478 SASEGGGLMTRSESLTAE 1495
Score = 40 (19.1 bits), Expect = 1.9e-36, Sum P(4) = 1.9e-36
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 80 RYPQPEKEYQS-FSLIYRNRSLDLICKDKDEAELWFTALRALISED 124
RY QP K + +Y+ RS L CK+ + + ++ ISE+
Sbjct: 1286 RY-QPGKHLSEVYRCVYKVRSRLLACKNLELIQTRSSSRDRWISEN 1330
Score = 40 (19.1 bits), Expect = 3.8e-32, Sum P(3) = 3.8e-32
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 751 PKGKSYHASPSLN-GKFQ--WEPNSDFIK-SNKISASPPGSRRVSRAPSP 796
P S SPS G+ Q P+S + +N+ + S P SR +S +P P
Sbjct: 2702 PPISSLPTSPSDEVGRRQSLTSPDSQSARPANRTALSDPSSR-LSTSPPP 2750
Score = 40 (19.1 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 437 HGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVE 472
+ D+ S V + + L +LK +++ GV H A+ E
Sbjct: 1829 YADKLSPKVVQSLLDLLCSQLKNLLSQTGVLHMASFGE 1866
Score = 39 (18.8 bits), Expect = 3.8e-32, Sum P(3) = 3.8e-32
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 728 QNCKRVTEKENMNSRSATDGQSKPKGKS 755
Q+ KR +K S D + KP+ +S
Sbjct: 2409 QSTKRHEKKHRHESEEKGDVEQKPESES 2436
Score = 39 (18.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 593 YTWGKGANGQLGH 605
+T GKG +G+L H
Sbjct: 1693 HTGGKGESGRLHH 1705
Score = 37 (18.1 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 616 LVEALRDKQVKSVVCG 631
L+ L KQ++ +VCG
Sbjct: 4714 LLSLLTAKQLEQMVCG 4729
Score = 37 (18.1 bits), Expect = 3.1e-37, Sum P(3) = 3.1e-37
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 143 TQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
T +HV+S+ + D+ D + Y N
Sbjct: 891 TSLQDHTHVASLLGYSSPSDAADLSSVCTGYGN 923
Score = 37 (18.1 bits), Expect = 1.9e-36, Sum P(4) = 1.9e-36
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 147 SPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRL 181
SPS LT+ DS +P + P +RL
Sbjct: 2710 SPSDEVGRRQSLTSPDSQSARPANRTALSDPSSRL 2744
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 475 (172.3 bits), Expect = 4.1e-37, Sum P(3) = 4.1e-37
Identities = 117/361 (32%), Positives = 187/361 (51%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R+ ++P S AQ + CG ++ G + + GEGS G+LG G D+ +
Sbjct: 4016 RNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTV 4073
Query: 342 IDALNGSNIHMV--ACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
I AL G + + +CG + H+ A+T SG++++WGDG + G LG + PR++
Sbjct: 4074 ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA 4131
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
++G ++ + CG H+A +TS GKLFTFG+G +G LG G+ S+ +P V L+ +
Sbjct: 4132 -LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4190
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
+CG+ HT A+ GS ++ +GDG G+LG G++ + P V V
Sbjct: 4191 QVACGLNHTLAV-----SADGS------MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG 4239
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDI 576
I KVACG ++ALT G V++ G +G P + R + + IED+
Sbjct: 4240 IGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDV 4297
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
A G+ H ++S +VY WG + GQLG G + + PTLV L+ K ++ + G +A
Sbjct: 4298 AVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSA 4357
Query: 637 A 637
A
Sbjct: 4358 A 4358
Score = 420 (152.9 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 113/357 (31%), Positives = 180/357 (50%)
Query: 288 KVLESTVVL---DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
K+L+ + L DAQ+I G +++ G + + G+GS G+LG G + S K +
Sbjct: 392 KILQPKMALSFSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 345 LNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+I V+ + HT A T G++++WGDG + G LG + + P+ + G ++
Sbjct: 452 EPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG--DYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + + G H+AA+T G+L+T+G+G FG LGHGD +S ++P V+ + + V S
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--S 567
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG HT A+ + G+T S F GD G+LGHGD P V+ +
Sbjct: 568 CGSSHTIALSK-DGRTVWS--------FGGGDNV-GKLGHGDTNRVYKPKVVEALQGMFI 617
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
KV G ++ALT+TGQV++ G GS +T P IE R + DI+ G
Sbjct: 618 RKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIV-DISIGDS 676
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
H+ + +EVY WG + GQ G G++ T P V L ++ + G++ + A
Sbjct: 677 HVWLFVMDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 733
Score = 364 (133.2 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 104/340 (30%), Positives = 173/340 (50%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
SI G A +V++ +++ WG S +L G + + PK+ AL+ S+ + G++
Sbjct: 359 SIQTGD--APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM--ALSFSDAQTIEAGQYC 414
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T ++ G + G G + LGL G + S ++SS HT A
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGL-GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKT 477
T+ G++F++GDG +G LGHG+ S+ P+ ++ + K V+ S G H+AA+ E
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE----- 528
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+G +L+TWG+G G+LGHGD+ R +P VK ++ +V+CG S TIAL+
Sbjct: 529 ---DG----ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKD 579
Query: 538 GQ-VFSMGSAD-YGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ V+S G D G+LG G T + + ++ ++ +I + GS ++S +VY
Sbjct: 580 GRTVWSFGGGDNVGKLGH-GDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYA 638
Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSN 633
WG GA LG G +E P L+E L ++ + G +
Sbjct: 639 WGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDS 676
Score = 350 (128.3 bits), Expect = 2.2e-22, Sum P(4) = 2.2e-22
Identities = 96/327 (29%), Positives = 162/327 (49%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
++ WG G G+L +V P + S V CG+ T + +G + G+G
Sbjct: 4000 VYLWGAGRHGQLAEAGR-NVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGEGS 4056
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGP-WHTAAITSAGKLFTFGDGTFG 433
+ G LGQ + + +S ++G ++ + CG H+ A+T +G++F++GDG +G
Sbjct: 4057 Y--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4113
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHG+ PR++E L+ + V SCG H+A + S+G KLFT+G+
Sbjct: 4114 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--------SDG----KLFTFGN 4161
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
G G+LG G+ + +P V + +VACG + T+A++A G V++ G DYG+LG
Sbjct: 4162 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4221
Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
ST K P +++ + I+ +ACG+ ++ VYT+G+ L G N
Sbjct: 4222 LGNSTAKSSPQKVDV-LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4280
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P + L ++ V G+ T A+
Sbjct: 4281 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4307
Score = 311 (114.5 bits), Expect = 3.5e-18, Sum P(4) = 3.5e-18
Identities = 83/277 (29%), Positives = 141/277 (50%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
D+Y WG G H GQ++E + + Q + CG T I + G +
Sbjct: 3999 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4052
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
G+G++G LG G+ V + L+ + ++ SCG H+ A+ E SG
Sbjct: 4053 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SG----- 4102
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
++F+WGDG G+LGHG+++ + P ++ +++CG + +T+ G++F+ G
Sbjct: 4103 --EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4160
Query: 545 SADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
+ DYG+LG G+T K P R+ ++ I +ACG H +AV + S V+ +G G G
Sbjct: 4161 NGDYGRLGL-GNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4218
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+LG G++ K +P V+ L +K V CG+ F+ A+
Sbjct: 4219 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4255
Score = 284 (105.0 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 87/297 (29%), Positives = 151/297 (50%)
Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y WG + H L + G +I + K++ Q +I G + T I++ G +
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKI---LQPKMALSFSDAQ--TIEAGQYCTFVISTDGSVRA 426
Query: 427 FGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGL 483
G G++G LG GD ++ S +++ E + +K V +S G HT A T G
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT-----TEG---- 477
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVF 541
++F+WGDG G+LGHG++ + P ++ + + C V+ G+ + A+T G+++
Sbjct: 478 ---EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELY 533
Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGA 599
+ G D+G+LG S + PT ++ +I + + +++CGS H IA+ V+++G G
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 600 N-GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
N G+LGHGD P +VEAL+ ++ V GS + A+ V C GC
Sbjct: 591 NVGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 647
Score = 278 (102.9 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
Identities = 74/251 (29%), Positives = 122/251 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ +E+ + ++CG KH+ +VT G++F++G G G+LG G ++ P+ + AL
Sbjct: 4126 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4185
Query: 347 GSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I VACG HT AV+ G + + +GDG + G LG + + P+KV + G+ I
Sbjct: 4186 GYQIGQVACGLNHTLAVSADGSMVWAFGDG--DYGKLGLGNSTAKSSPQKVD-VLCGIGI 4242
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ CG + A+T G ++TFG L G + + P+++ L + + G
Sbjct: 4243 KKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAE 4302
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
HT A+ S G ++ WG +EGQLG G P V V + +++
Sbjct: 4303 HTLALA--------STG----DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQIS 4350
Query: 526 CGHSITIALTA 536
G + A TA
Sbjct: 4351 AGRCHSAAWTA 4361
Score = 233 (87.1 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 67/230 (29%), Positives = 113/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
WH ++ +G G G L R+ VP + + + V+ CG + +++
Sbjct: 3992 WHLGGKCD---VYLWGAGRHGQLAEAGRN-VMVPAAAPSFSQAQQVI--CGQ-NCTFVIQ 4044
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACGHS- 529
+NG + G+G+ G+LG G+++ V + ++ +CG
Sbjct: 4045 -------ANGT----VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4093
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ALT +G+VFS G DYG+LG S + P +IE ++ + ++CG H AVV+S
Sbjct: 4094 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTS 4152
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+++T+G G G+LG G+ NK+ P V AL Q+ V CG N T A+
Sbjct: 4153 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4202
Score = 176 (67.0 bits), Expect = 6.5e-27, Sum P(2) = 6.5e-27
Identities = 44/147 (29%), Positives = 76/147 (51%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EA 334
+ D PKV+E+ + + + GS+ ++ +T GQ+++WG G LG G EA
Sbjct: 595 LGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEA 652
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-P 393
PKLI+ L + I ++ G+ H + ++Y WG+ +++G GQ + P
Sbjct: 653 TALRPKLIEELAATRIVDISIGDSHVWLFVMDNEVYAWGN--NSMGQCGQGNSTGPITKP 710
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITS 420
+KVSG ++G+ I I G H+ A T+
Sbjct: 711 KKVSG-LDGIAIQQISAGTSHSLAWTA 736
Score = 43 (20.2 bits), Expect = 3.4e-33, Sum P(2) = 3.4e-33
Identities = 20/91 (21%), Positives = 37/91 (40%)
Query: 771 NSDFIKSNKISASPPGSRRVSRAPSPISRKS---SPACSITMN--SFTDLANSEVIFEYS 825
NS + PP S++ R + + + AC+ ++ + L S VI E
Sbjct: 1406 NSGAGSGTRADDPPPQSQQERRVSTDLPEGQDVYTAACNSVIHRCALLILGVSPVIDELQ 1465
Query: 826 KQTNDNFNQEPDVLRAQLEDLTRKSQFLEVE 856
K+ + Q+P ++ L +S+ L E
Sbjct: 1466 KRKEEGQLQQPSTSASEGGGLMTRSESLTAE 1496
Score = 40 (19.1 bits), Expect = 2.5e-36, Sum P(4) = 2.5e-36
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 80 RYPQPEKEYQS-FSLIYRNRSLDLICKDKDEAELWFTALRALISED 124
RY QP K + +Y+ RS L CK+ + + ++ ISE+
Sbjct: 1287 RY-QPGKSLSEVYRCVYKVRSRLLACKNLELIQTRSSSRDRWISEN 1331
Score = 40 (19.1 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 751 PKGKSYHASPSLN-GKFQ--WEPNSDFIK-SNKISASPPGSRRVSRAPSP 796
P S SPS G+ Q P+S + +N+ + S P SR +S +P P
Sbjct: 2703 PPISSLPTSPSDEVGRRQSLTSPDSQSARPANRTALSDPSSR-LSTSPPP 2751
Score = 40 (19.1 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVY 593
+KH + ACG S SEVY
Sbjct: 1273 LKHTNLLSQACGESRYQPGKSLSEVY 1298
Score = 37 (18.1 bits), Expect = 4.1e-37, Sum P(3) = 4.1e-37
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 616 LVEALRDKQVKSVVCG 631
L+ L KQ++ +VCG
Sbjct: 4716 LLSLLTAKQLEQMVCG 4731
Score = 37 (18.1 bits), Expect = 4.1e-37, Sum P(3) = 4.1e-37
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 143 TQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
T +HV+S+ + D+ D + Y N
Sbjct: 892 TSLQDHTHVASLLGYSSPSDAADLSSVCTGYGN 924
Score = 37 (18.1 bits), Expect = 2.5e-36, Sum P(4) = 2.5e-36
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 147 SPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRL 181
SPS LT+ DS +P + P +RL
Sbjct: 2711 SPSDEVGRRQSLTSPDSQSARPANRTALSDPSSRL 2745
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 406 (148.0 bits), Expect = 5.9e-37, P = 5.9e-37
Identities = 120/351 (34%), Positives = 180/351 (51%)
Query: 316 QIFSWGEGSGGKLGHGVE---------------ADVSY-----PKLIDALNGSNIHMVAC 355
Q+FSWG G+ G+LG G+E +D S+ P IDA + S ++C
Sbjct: 49 QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G FH+ +T+ GDL+ WG G + G LG E S ++P ++ E I I G H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHS 164
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK-TVMASCGVWHTAAIVEVA 474
A+T G +FT+G G FGALGH + VPR V+ + K + +A+ G HTAAI E
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGT-HTAAITE-- 221
Query: 475 GKTSGSNGLSSKKLFTWG-DGAEGQLGHGDAE-PRV-----VPLCVKVSDDISFCKVACG 527
SG +L+ WG + +G+LG G P VP VK + V+CG
Sbjct: 222 ---SG-------ELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCG 270
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
T+ALT GQ+++ G+ +LG + G + +++ I IACG YH ++
Sbjct: 271 GFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALT 330
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ +V +WG G +GQLG N++ PT +EAL DK++ + G + +AAI
Sbjct: 331 EEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381
Score = 390 (142.3 bits), Expect = 3.2e-35, P = 3.2e-35
Identities = 118/356 (33%), Positives = 174/356 (48%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+CG H+ L T G ++ WG+G GG+LG G E V P L +I +A G H+
Sbjct: 106 ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A+T GD++TWG G G LG +PR+V + +IS+I HTAAIT
Sbjct: 165 VALTHQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 221
Query: 421 AGKLFTFG----DGTFGALGHG----DRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
+G+L+ +G DG G LG G + SVP +V+ L + SCG + T A+ +
Sbjct: 222 SGELYMWGREEGDGRLG-LGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK 279
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
G +L+ WG + +LG GD P+ V + + ++ACG ++
Sbjct: 280 -----EG-------QLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSL 327
Query: 533 ALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
ALT G+V S G +GQLGS K PT IE + + I IA G A ++ E
Sbjct: 328 ALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA-LADKKIVFIASGGSSSAAITDGGE 386
Query: 592 VYTWGKGANGQLG-HGDNENKQTPTLVEALRDK------QVKSVVCGSNFTAAICL 640
++ WG + QLG G E + TP V L ++ +V S+ G++ A+CL
Sbjct: 387 LWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALCL 440
Score = 327 (120.2 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 95/303 (31%), Positives = 142/303 (46%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
IA G H+V +T QG +F+WG G G LGH V P+ +D I +A HT
Sbjct: 157 IALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHT 216
Query: 361 CAVTLSGDLYTWG--DGIHNLGL---LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
A+T SG+LY WG +G LGL G +P KV + ++S+ CG + T
Sbjct: 217 AAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFT 274
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
A+T G+L+ +G + LG GD P V +L+ ++ +CG +H+ A+ E
Sbjct: 275 MALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE--- 331
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
G K+ +WG G GQLG + VP ++ D +A G S + A+T
Sbjct: 332 --EG-------KVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAIT 382
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI--------KHRYIEDIACGSYHIAVVS 587
G+++ G+A QLG PG T +E N H+ I I+ G+ H +
Sbjct: 383 DGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVIS-ISIGASHALCLV 441
Query: 588 SKS 590
S+S
Sbjct: 442 SRS 444
Score = 264 (98.0 bits), Expect = 9.7e-20, P = 9.7e-20
Identities = 75/247 (30%), Positives = 118/247 (47%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG-GKLGHGVE------ADVS 337
L+P+ ++ + +IA H +T+ G+++ WG G G+LG G +S
Sbjct: 193 LVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLS 252
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
P + AL + V+CG F T A+T G L+ WG N L G+ + W P V
Sbjct: 253 VPSKVKALTVP-VASVSCGGFFTMALTKEGQLWNWGAN-SNYEL-GRGDNLGGWEPMPVP 309
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
+EG++I+ I CG +H+ A+T GK+ ++G G G LG + VP E+E L + K
Sbjct: 310 S-LEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKI 368
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCVKVS 516
V + G +AAI T G +L+ WG+ + QLG G E + P+ V
Sbjct: 369 VFIASGGSSSAAI------TDGG------ELWMWGNAKDFQLGVPGLPEIQTTPVEVNFL 416
Query: 517 DDISFCK 523
+ C+
Sbjct: 417 TEEDECQ 423
Score = 206 (77.6 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 59/193 (30%), Positives = 94/193 (48%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+P +++ V A S++CG + +TK+GQ+++WG S +LG G P + +L
Sbjct: 253 VPSKVKALTVPVA-SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSL 311
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I +ACG +H+ A+T G + +WG G H G LG S + +P ++ + +I
Sbjct: 312 EGVRITQIACGGYHSLALTEEGKVLSWGHGGH--GQLGSSSLRNQKVPTEIEA-LADKKI 368
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKEL------KTV 458
I G +AAIT G+L+ +G+ LG G + P EV L E K +
Sbjct: 369 VFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVI 428
Query: 459 MASCGVWHTAAIV 471
S G H +V
Sbjct: 429 SISIGASHALCLV 441
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 430 (156.4 bits), Expect = 7.1e-37, P = 7.1e-37
Identities = 108/346 (31%), Positives = 166/346 (47%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + V + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI V+CGE HT A+ G +Y WG D LGL G SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G + + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + SG+ +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
IACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 380 (138.8 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 98/328 (29%), Positives = 157/328 (47%)
Query: 320 WGEGSGGKLG-HGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+LG G++ ++ P+ D + V CG HT V G +YT G +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG- 436
+LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G LG
Sbjct: 62 DLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGL 118
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G VPR +++L +++ V +CG +H+ A+ K S ++F WG
Sbjct: 119 QGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL----SKAS--------EVFCWGQNKY 166
Query: 497 GQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GQLG G + + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 167 GQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++ P
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPR 286
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKG 643
V L V + CG T+A G
Sbjct: 287 KVFELMGSIVTQIACGRQHTSAFVPSSG 314
Score = 344 (126.2 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 91/276 (32%), Positives = 138/276 (50%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDA 344
+P+ ++S + +ACG H++ ++K ++F WG+ G+LG G+E + P+LI +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKS 186
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L G VA G H+ +TLSG ++ WG + G LG E ++P + + +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-ETLKELKTVMASCG 463
I ICCG HTAA+T G +FTFG G +G LGH S PR+V E + + T +A CG
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA-CG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
HT+A V SS +++++G G GQLG G R P VK + S+
Sbjct: 303 RQHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK-GNWFSY-N 349
Query: 524 VACGHSI-TIALTATGQVFSMGSADYGQLGSPGSTG 558
C I + ++FS G + SP S G
Sbjct: 350 GQCPQDIGSEDYFCVKRIFSGGDQSFSHYSSPQSCG 385
Score = 308 (113.5 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 86/277 (31%), Positives = 131/277 (47%)
Query: 372 WGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
WG+ + LGL G + E PRK S ++ + CG HT + G ++T G
Sbjct: 4 WGNASYGQLGL-GGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH S P +V L V SCG HT A+ G +++
Sbjct: 62 DLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLAL--------NDKG----QVYA 107
Query: 491 WGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G YG
Sbjct: 108 WGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYG 167
Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG K P I+ + +++ +A G H V++ ++ WG+ GQLG D
Sbjct: 168 QLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 227 ENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 191 (72.3 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 50/155 (32%), Positives = 78/155 (50%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHSITIALTATGQVFSMG 544
+ WG+ + GQLG G + +V L + SD KV CG T+ + G V++ G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIV-LEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
D GQLG S K P ++ + + I ++CG H ++ K +VY WG ++GQLG
Sbjct: 60 CNDLGQLGHEKSRKK-PEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117
Query: 605 -HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G E + P +++L D Q+ V CG + A+
Sbjct: 118 LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLAL 152
Score = 167 (63.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 42/120 (35%), Positives = 61/120 (50%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +L+S I CG H +TK+G +F++G G G+LGH + P
Sbjct: 226 DENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y++G G + G LG S + P V G
Sbjct: 286 RKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN--GQLGTGSTSNRKSPFTVKG 343
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 476 (172.6 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 118/361 (32%), Positives = 187/361 (51%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R+ ++P S AQ + CG ++ G + + GEGS G+LG G D+ +
Sbjct: 4013 RNVMVPAAAPS--FSQAQQVICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTV 4070
Query: 342 IDALNGSNIHMV--ACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
I AL G + + +CG + H+ A+T SG++++WGDG + G LG + PR++
Sbjct: 4071 ISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA 4128
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
++G ++ + CG H+A +TS GKLFTFG+G +G LG G+ S+ +P V L+ +
Sbjct: 4129 -LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIG 4187
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
+CG+ HT A+ GS ++ +GDG G+LG G++ + P V V
Sbjct: 4188 QVACGLNHTLAV-----SADGS------MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG 4236
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDI 576
I KVACG ++ALT G V++ G +G P + R + + IED+
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDV 4294
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
A G+ H ++S +VY WG + GQLG G + + PTLV L+ K V+ + G +A
Sbjct: 4295 AVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSA 4354
Query: 637 A 637
A
Sbjct: 4355 A 4355
Score = 427 (155.4 bits), Expect = 2.5e-33, Sum P(2) = 2.5e-33
Identities = 112/357 (31%), Positives = 181/357 (50%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
L PK+ S DAQ+I G +++ G + + G+GS G+LG G + S K +
Sbjct: 394 LQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 345 LNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+I V+ + HT A T G++++WGDG + G LG + + P+ + G ++
Sbjct: 452 EPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG--DYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + + G H+AA+T G+L+T+G+G FG LGHGD +S ++P V+ + + V S
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--S 567
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG HT A+ + G+T ++++G G G+LGHGD P ++ +
Sbjct: 568 CGSSHTIALSK-DGRT----------VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
KV G ++ALT+TGQV++ G GS +T P IE R + DI+ G
Sbjct: 617 RKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIV-DISIGDS 675
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
H +S +EVY WG + GQ G G++ T P V L ++ + G++ + A
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 370 (135.3 bits), Expect = 4.0e-27, Sum P(2) = 4.0e-27
Identities = 107/345 (31%), Positives = 173/345 (50%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
SI G A +V++ +++ WG S +L G + + PKL + S+ + G++
Sbjct: 359 SIQTGD--APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYC 414
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T ++ G + G G + LGL G + S ++SS HT A
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGL-GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKT 477
T+ G++F++GDG +G LGHG+ S+ P+ ++ + K V+ S G H+AA+ E
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE----- 528
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+G +L+TWG+G G+LGHGD+ R +P VK ++ +V+CG S TIAL+
Sbjct: 529 ---DG----ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKD 579
Query: 538 GQ-VFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ V+S G D G+LG G T + P IE ++ +I + GS ++S +VY
Sbjct: 580 GRTVWSFGGGDNGKLGH-GDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
WG GA LG G +E P L+E L ++ + G + A+
Sbjct: 638 WGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680
Score = 350 (128.3 bits), Expect = 8.7e-23, Sum P(4) = 8.7e-23
Identities = 96/327 (29%), Positives = 162/327 (49%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
++ WG G G+L +V P + S V CG+ T + +G + G+G
Sbjct: 3997 VYLWGAGRHGQLAEAGR-NVMVPAAAPSF--SQAQQVICGQNCTFVIQANGTVLACGEGS 4053
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGP-WHTAAITSAGKLFTFGDGTFG 433
+ G LGQ + + +S ++G ++ + CG H+ A+T +G++F++GDG +G
Sbjct: 4054 Y--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4110
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHG+ PR++E L+ + V SCG H+A + S+G KLFT+G+
Sbjct: 4111 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT--------SDG----KLFTFGN 4158
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
G G+LG G+ + +P V + +VACG + T+A++A G V++ G DYG+LG
Sbjct: 4159 GDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLG 4218
Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
ST K P +++ + I+ +ACG+ ++ VYT+G+ L G N
Sbjct: 4219 LGNSTAKSSPQKVDV-LCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNH 4277
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P + L ++ V G+ T A+
Sbjct: 4278 NRPQQIPVLAGVVIEDVAVGAEHTLAL 4304
Score = 311 (114.5 bits), Expect = 1.4e-18, Sum P(4) = 1.4e-18
Identities = 83/277 (29%), Positives = 141/277 (50%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
D+Y WG G H GQ++E + + Q + CG T I + G +
Sbjct: 3996 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4049
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
G+G++G LG G+ V + L+ + ++ SCG H+ A+ E SG
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE-----SG----- 4099
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
++F+WGDG G+LGHG+++ + P ++ +++CG + +T+ G++F+ G
Sbjct: 4100 --EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157
Query: 545 SADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
+ DYG+LG G+T K P R+ ++ I +ACG H +AV + S V+ +G G G
Sbjct: 4158 NGDYGRLGL-GNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4215
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+LG G++ K +P V+ L +K V CG+ F+ A+
Sbjct: 4216 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252
Score = 294 (108.6 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 86/296 (29%), Positives = 151/296 (51%)
Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y WG + H L + G +I + K++ Q +I G + T I++ G +
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKI---LQPKLAPSFSDAQ--TIEAGQYCTFVISTDGSVRA 426
Query: 427 FGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGL 483
G G++G LG GD ++ S +++ E + +K V +S G HT A T G
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT-----TEG---- 477
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVF 541
++F+WGDG G+LGHG++ + P ++ + + C V+ G+ + A+T G+++
Sbjct: 478 ---EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELY 533
Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGA 599
+ G D+G+LG S + PT ++ +I + + +++CGS H IA+ V+++G G
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
NG+LGHGD P ++EAL+ ++ V GS + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 277 (102.6 bits), Expect = 9.1e-15, Sum P(4) = 9.1e-15
Identities = 74/251 (29%), Positives = 122/251 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ +E+ + ++CG KH+ +VT G++F++G G G+LG G ++ P+ + AL
Sbjct: 4123 PRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALE 4182
Query: 347 GSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I VACG HT AV+ G + + +GDG + G LG + + P+KV + G+ I
Sbjct: 4183 GYQIGQVACGLNHTLAVSADGSMVWAFGDG--DYGKLGLGNSTAKSSPQKVD-VLCGIGI 4239
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ CG + A+T G ++TFG L G + + P+++ L + + G
Sbjct: 4240 KKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAE 4299
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
HT A+ S G ++ WG +EGQLG G P V V + +++
Sbjct: 4300 HTLALA--------STG----DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQIS 4347
Query: 526 CGHSITIALTA 536
G + A TA
Sbjct: 4348 AGRCHSAAWTA 4358
Score = 233 (87.1 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 67/230 (29%), Positives = 113/230 (49%)
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
WH ++ +G G G L R+ VP + + + V+ CG + +++
Sbjct: 3989 WHLGGKCD---VYLWGAGRHGQLAEAGRN-VMVPAAAPSFSQAQQVI--CGQ-NCTFVIQ 4041
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACGHS- 529
+NG + G+G+ G+LG G+++ V + ++ +CG
Sbjct: 4042 -------ANGT----VLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4090
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ALT +G+VFS G DYG+LG S + P +IE ++ + ++CG H AVV+S
Sbjct: 4091 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTS 4149
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+++T+G G G+LG G+ NK+ P V AL Q+ V CG N T A+
Sbjct: 4150 DGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV 4199
Score = 180 (68.4 bits), Expect = 2.5e-27, Sum P(2) = 2.5e-27
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EA 334
+ D PKV+E+ + + + GS+ ++ +T GQ+++WG G LG G EA
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEA 651
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-P 393
PKLI+ L + I ++ G+ H A++ ++Y WG+ +++G GQ + P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGN--NSMGQCGQGNSTGPITKP 709
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITS 420
+KVSG ++G+ I I G H+ A T+
Sbjct: 710 KKVSG-LDGIAIQQISAGTSHSLAWTA 735
Score = 42 (19.8 bits), Expect = 8.7e-23, Sum P(4) = 8.7e-23
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 311 VTKQGQIFSWGEGSGGKLGHGV 332
+ + GQI + GSGGK G+G+
Sbjct: 2042 IVENGQILT--HGSGGK-GYGL 2060
Score = 42 (19.8 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
H AA+V GK++ + L S D AE + G ++
Sbjct: 2812 HGAAVVGSGGKSNDPSYLQSPGDIPSADAAEMEEGFSES 2850
Score = 40 (19.1 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 199 TRAESVSKSLNFVASGGLDDA 219
++ ++SKS N +AS LD A
Sbjct: 2449 SQGTTISKSENEIASFSLDSA 2469
Score = 40 (19.1 bits), Expect = 4.8e-32, Sum P(3) = 4.8e-32
Identities = 17/50 (34%), Positives = 25/50 (50%)
Query: 751 PKGKSYHASPSLN-GKFQ--WEPNSDFIK-SNKISASPPGSRRVSRAPSP 796
P S SPS G+ Q P+S + +N+ + S P SR +S +P P
Sbjct: 2700 PPISSLPTSPSDEVGRRQSLTSPDSQSARPANRTALSDPSSR-LSTSPPP 2748
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVY 593
+KH + ACG S SEVY
Sbjct: 1272 LKHTNLLSQACGESRYQPGKSLSEVY 1297
Score = 39 (18.8 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 80 RYPQPEKEYQS-FSLIYRNRSLDLICKD 106
RY QP K + +Y+ RS L CK+
Sbjct: 1286 RY-QPGKSLSEVYRCVYKVRSRLLACKN 1312
Score = 38 (18.4 bits), Expect = 3.5e-18, Sum P(4) = 3.5e-18
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 361 CAVTLSGDLYTWGDGIHNLGLL--GQVSEISHW 391
C + +G + T G G GL G S W
Sbjct: 2040 CCIVENGQILTHGSGGKGYGLASTGVTSGCYQW 2072
Score = 37 (18.1 bits), Expect = 1.2e-36, Sum P(4) = 1.2e-36
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 616 LVEALRDKQVKSVVCG 631
L+ L KQ++ +VCG
Sbjct: 4712 LLSLLTAKQLEQMVCG 4727
Score = 37 (18.1 bits), Expect = 1.9e-36, Sum P(4) = 1.9e-36
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 143 TQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
T +HV+S+ + D+ D + Y N
Sbjct: 891 TSLQDHTHVASLLGYSSPSDAADLSSVCTGYGN 923
Score = 37 (18.1 bits), Expect = 2.4e-36, Sum P(4) = 2.4e-36
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 147 SPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRL 181
SPS LT+ DS +P + P +RL
Sbjct: 2708 SPSDEVGRRQSLTSPDSQSARPANRTALSDPSSRL 2742
Score = 37 (18.1 bits), Expect = 4.8e-32, Sum P(3) = 4.8e-32
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 705 IKLNTTSESGSNSQIPRNSSGLFQNCKRVT 734
+ L+ E GS S R SS FQ+ +T
Sbjct: 1646 VLLSGMEEKGSISLAGRGSSSGFQSSTLLT 1675
Score = 37 (18.1 bits), Expect = 7.1e-05, Sum P(4) = 7.1e-05
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 597 KGANGQLGHGDNENKQTPTLVEALR 621
KG+ G G + Q+ TL+ ++R
Sbjct: 1654 KGSISLAGRGSSSGFQSSTLLTSVR 1678
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 426 (155.0 bits), Expect = 1.9e-36, P = 1.9e-36
Identities = 105/325 (32%), Positives = 166/325 (51%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
+ + +ACG H+V + + G++++ G + G+LGH E++ S P+ I AL G +I VACG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPEPIGALAGQHIVHVACG 92
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHT 415
E H+ A++ G +++WG G G LG + E + +PR + ++ I I CG WH
Sbjct: 93 ESHSVALSDQGQVFSWGAGSD--GQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNWHC 149
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
A+ + G+ FT+G ++G LG G S + P+ V++L + + G H+ A+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
SG+ +F WG + GQLG D R P VK+ ++CG T L
Sbjct: 206 -SLSGA-------VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
T +G VF+ G+ GQLG + R + + IACG +H +A V S +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
+G G GQLG G N + P+ V+
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 391 (142.7 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 103/333 (30%), Positives = 166/333 (49%)
Query: 320 WGEGSGGK--LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+ +G ++ + P++ ++ N+ VACG H+ + G++YT G ++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG--LN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
G LG SE S P + G + G I + CG H+ A++ G++F++G G+ G LG
Sbjct: 62 TKGQLGHESEGSK--PEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 438 GD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
+ +VPR ++ L + + SCG WH A+ ++G + FTWG +
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA--------ADG----QFFTWGQNSY 166
Query: 497 GQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP 554
GQLG G P + P VK D I +VA G + + AL+ +G VF G GQLG S
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD 226
Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++ P
Sbjct: 227 ERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG + T A G+ A
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318
Score = 376 (137.4 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 89/271 (32%), Positives = 141/271 (52%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFH 359
+ACG H+V ++ QGQ+FSWG GS G+LG +E V+ P+LI LN I ++CG +H
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
A+ G +TWG ++ G LG E S P++V ++G+ ++ + G H+ A+
Sbjct: 149 CLALAADGQFFTWGQ--NSYGQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFAL 205
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
+ +G +F +G + G LG D P V+ L+ K V SCG HTA + + G
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGG--- 262
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
+FT+G G+ GQLGH V P V ++ACG T+A ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSS 313
Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN 567
G +++ G GQLG+ + K P+ ++G+
Sbjct: 314 GMIYAFGCGTRGQLGTGHTCNVKCPSPVKGH 344
Score = 282 (104.3 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 73/219 (33%), Positives = 113/219 (51%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLID 343
L+ K+ + T++ I+CG+ H + + GQ F+WG+ S G+LG G E + P+ +
Sbjct: 130 LIKKLNQQTIL----QISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVK 185
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+L+G + VA G H+ A++LSG ++ WG ++ G LG E P V +
Sbjct: 186 SLDGIPLAQVAAGGAHSFALSLSGAVFGWGK--NSSGQLGLSDERDRESPCHVK-LLRSQ 242
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I CG HTA +T +G +FTFG G+ G LGH + PR V L + +CG
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
HT A V S+G+ ++ +G G GQLG G
Sbjct: 303 RHHTLAFVP-------SSGM----IYAFGCGTRGQLGTG 330
Score = 243 (90.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 55/165 (33%), Positives = 86/165 (52%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ ++S + +A G H+ ++ G +F WG+ S G+LG E D P + L
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR 240
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ ++CGE HT +T SG ++T+G G + G LG S PR+V ++ G ++S
Sbjct: 241 SQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVS 297
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
I CG HT A + S+G ++ FG GT G LG G + P V+
Sbjct: 298 QIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 184 (69.8 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 46/148 (31%), Positives = 76/148 (51%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVP--LCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
+ WG + GQ G G ++P D + +VACG + ++ L G+V++ G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
GQLG S G P I G + ++I +ACG H +S + +V++WG G++GQLG
Sbjct: 61 NTKGQLGHE-SEGSKPEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 606 GDNENKQT-PTLVEALRDKQVKSVVCGS 632
E+ T P L++ L + + + CG+
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGN 146
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 425 (154.7 bits), Expect = 3.2e-36, P = 3.2e-36
Identities = 112/357 (31%), Positives = 181/357 (50%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
L PK+ S DAQ+I G +++ G + + G+GS G+LG G + S K +
Sbjct: 394 LQPKLAPS--FSDAQTIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTF 451
Query: 345 LNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+I V+ + HT A T G++++WGDG + G LG + + P+ + G ++
Sbjct: 452 EPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG--DYGKLGHGNSSTQKYPKLIQGPLQ 509
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + + G H+AA+T G+L+T+G+G FG LGHGD +S ++P V+ + + V S
Sbjct: 510 GKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--S 567
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG HT A+ + G+T ++++G G G+LGHGD P ++ +
Sbjct: 568 CGSSHTIALSK-DGRT----------VWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFI 616
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
KV G ++ALT+TGQV++ G GS +T P IE R + DI+ G
Sbjct: 617 RKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELAATRIV-DISIGDS 675
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
H +S +EVY WG + GQ G G++ T P V L ++ + G++ + A
Sbjct: 676 HCLSLSHDNEVYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 367 (134.2 bits), Expect = 6.7e-30, P = 6.7e-30
Identities = 106/340 (31%), Positives = 171/340 (50%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
SI G A +V++ +++ WG S +L G + + PKL + S+ + G++
Sbjct: 359 SIQTGD--APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYC 414
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T ++ G + G G + LGL G + S ++SS HT A
Sbjct: 415 TFVISTDGSVRACGKGSYGRLGL-GDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAF 473
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKT 477
T+ G++F++GDG +G LGHG+ S+ P+ ++ + K V+ S G H+AA+ E
Sbjct: 474 TTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE----- 528
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+G +L+TWG+G G+LGHGD+ R +P VK ++ +V+CG S TIAL+
Sbjct: 529 ---DG----ELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVG--EVSCGSSHTIALSKD 579
Query: 538 GQ-VFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ V+S G D G+LG G T + P IE ++ +I + GS ++S +VY
Sbjct: 580 GRTVWSFGGGDNGKLGH-GDTNRVYKPKVIEA-LQGMFIRKVCAGSQSSLALTSTGQVYA 637
Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSN 633
WG GA LG G +E P L+E L ++ + G +
Sbjct: 638 WGCGAC--LGCGSSEATALRPKLIEELAATRIVDISIGDS 675
Score = 294 (108.6 bits), Expect = 5.4e-22, P = 5.4e-22
Identities = 86/296 (29%), Positives = 151/296 (51%)
Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y WG + H L + G +I + K++ Q +I G + T I++ G +
Sbjct: 373 EVYVWGSNSSHQL-VEGTQEKI---LQPKLAPSFSDAQ--TIEAGQYCTFVISTDGSVRA 426
Query: 427 FGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGL 483
G G++G LG GD ++ S +++ E + +K V +S G HT A T G
Sbjct: 427 CGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT-----TEG---- 477
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVF 541
++F+WGDG G+LGHG++ + P ++ + + C V+ G+ + A+T G+++
Sbjct: 478 ---EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVTEDGELY 533
Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGA 599
+ G D+G+LG S + PT ++ +I + + +++CGS H IA+ V+++G G
Sbjct: 534 TWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRTVWSFGGGD 590
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
NG+LGHGD P ++EAL+ ++ V GS + A+ V C GC
Sbjct: 591 NGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 646
Score = 248 (92.4 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 71/227 (31%), Positives = 116/227 (51%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
++ +++ +G + L G + P+ + + +T+ A G + T I T
Sbjct: 368 VSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVI-----ST 420
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDA--EPRVVPLCVKVSDDI---SFCKVACGHSITI 532
GS + G G+ G+LG GD+ + + L + I S K + GH T+
Sbjct: 421 DGS-------VRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGH--TL 471
Query: 533 ALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
A T G+VFS G DYG+LG ST K+P I+G ++ + + ++ G H A V+ E
Sbjct: 472 AFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGE 531
Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+YTWG+G G+LGHGD+ ++ PTLV+ + + V V CGS+ T A+
Sbjct: 532 LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN--VGEVSCGSSHTIAL 576
Score = 177 (67.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 44/147 (29%), Positives = 78/147 (53%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EA 334
+ D PKV+E+ + + + GS+ ++ +T GQ+++WG G LG G EA
Sbjct: 594 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWG--CGACLGCGSSEA 651
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-P 393
PKLI+ L + I ++ G+ H +++ ++Y WG+ +++G GQ + P
Sbjct: 652 TALRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGN--NSMGQCGQGNSTGPITKP 709
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITS 420
+KVSG ++G+ I I G H+ A T+
Sbjct: 710 KKVSG-LDGIAIQQISAGTSHSLAWTA 735
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 420 (152.9 bits), Expect = 8.7e-36, P = 8.7e-36
Identities = 103/325 (31%), Positives = 164/325 (50%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
+ + +ACG H+V + + G++++ G + G+LGH E++ S P + L G +I VACG
Sbjct: 35 NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPAWVGTLAGQHIVHVACG 92
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHT 415
E H+ A++ G +++WG G G LG + E + +PR + ++ I I CG WH
Sbjct: 93 ESHSVALSDQGQVFSWGAGSD--GQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNWHC 149
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
A+ + G+ FT+G ++G LG G S + P+ V++L + + G H+ A+
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
SG+ +F WG + GQLG D R P VK+ ++CG T L
Sbjct: 206 -SLSGA-------VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
T +G VF+ G+ GQLG + R + + IACG +H +A V S +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317
Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
+G G GQLG G N + P+ V+
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 389 (142.0 bits), Expect = 2.1e-32, P = 2.1e-32
Identities = 104/333 (31%), Positives = 166/333 (49%)
Query: 320 WGEGSGGK--LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+ +G ++ + P++ ++ N+ VACG H+ + G++YT G ++
Sbjct: 4 WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG--LN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
G LG SE S P V G + G I + CG H+ A++ G++F++G G+ G LG
Sbjct: 62 TKGQLGHESEGSK--PAWV-GTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 438 GD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
+ +VPR ++ L + + SCG WH A+ ++G + FTWG +
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA--------ADG----QFFTWGQNSY 166
Query: 497 GQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP 554
GQLG G P + P VK D I +VA G + + AL+ +G VF G GQLG S
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSD 226
Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++ P
Sbjct: 227 ERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG + T A G+ A
Sbjct: 286 RRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318
Score = 376 (137.4 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 89/271 (32%), Positives = 141/271 (52%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFH 359
+ACG H+V ++ QGQ+FSWG GS G+LG +E V+ P+LI LN I ++CG +H
Sbjct: 89 VACGESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGNWH 148
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
A+ G +TWG ++ G LG E S P++V ++G+ ++ + G H+ A+
Sbjct: 149 CLALAADGQFFTWGQ--NSYGQLGLGKECPSQASPQRVKS-LDGIPLAQVAAGGAHSFAL 205
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
+ +G +F +G + G LG D P V+ L+ K V SCG HTA + + G
Sbjct: 206 SLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGG--- 262
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
+FT+G G+ GQLGH V P V ++ACG T+A ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSS 313
Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN 567
G +++ G GQLG+ + K P+ ++G+
Sbjct: 314 GMIYAFGCGTRGQLGTGHTCNVKCPSPVKGH 344
Score = 282 (104.3 bits), Expect = 8.7e-21, P = 8.7e-21
Identities = 73/219 (33%), Positives = 113/219 (51%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLID 343
L+ K+ + T++ I+CG+ H + + GQ F+WG+ S G+LG G E + P+ +
Sbjct: 130 LIKKLNQQTIL----QISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVK 185
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+L+G + VA G H+ A++LSG ++ WG ++ G LG E P V +
Sbjct: 186 SLDGIPLAQVAAGGAHSFALSLSGAVFGWGK--NSSGQLGLSDERDRESPCHVK-LLRSQ 242
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I CG HTA +T +G +FTFG G+ G LGH + PR V L + +CG
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
HT A V S+G+ ++ +G G GQLG G
Sbjct: 303 RHHTLAFVP-------SSGM----IYAFGCGTRGQLGTG 330
Score = 243 (90.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 55/165 (33%), Positives = 86/165 (52%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ ++S + +A G H+ ++ G +F WG+ S G+LG E D P + L
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR 240
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ ++CGE HT +T SG ++T+G G + G LG S PR+V ++ G ++S
Sbjct: 241 SQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVS 297
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
I CG HT A + S+G ++ FG GT G LG G + P V+
Sbjct: 298 QIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
Score = 185 (70.2 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVP--LCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
+ WG + GQ G G ++P D + +VACG + ++ L G+V++ G
Sbjct: 1 MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL 60
Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
GQLG S G P + G + ++I +ACG H +S + +V++WG G++GQLG
Sbjct: 61 NTKGQLGHE-SEGSKPAWV-GTLAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQLGL 118
Query: 606 GDNENKQT-PTLVEALRDKQVKSVVCGS 632
E+ T P L++ L + + + CG+
Sbjct: 119 TTIEDAVTVPRLIKKLNQQTILQISCGN 146
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 391 (142.7 bits), Expect = 2.5e-35, P = 2.5e-35
Identities = 102/367 (27%), Positives = 181/367 (49%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEF 358
++ACG H + +T+ ++F+ G G+LG V++ P + L+ +H ++ G +
Sbjct: 86 AVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILH-ISAGYY 144
Query: 359 HTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A+T+ G+LY WG + LGL + + + +P KV + G+ I S+ G H+ A
Sbjct: 145 HSAAITVDGELYMWGKNSSGQLGLGKKAARVVR-VPTKVEA-LHGITIQSVALGSEHSVA 202
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTS---------VPREVETLKELKTVMASCGVWHTA 468
+T G++ ++G G G LGHG +SS PR ++ L+ +K + G+ H+A
Sbjct: 203 VTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSA 262
Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VACG 527
E NG + F +G+ + ++G G P + ++ + + VACG
Sbjct: 263 CTDE--------NGSA----FMFGEKSINKMGFGGVRNATTP---SIISEVPYAEEVACG 307
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
T +T G++++ GS + G LG+ + P R+EG + ++CG H A +
Sbjct: 308 GYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367
Query: 587 SSKSEVYTWGKGAN------------GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
S + V+TWG G + GQLGHG + + P +V+ ++ + + CG N
Sbjct: 368 SDNN-VFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVDLGKNVRAVHISCGFNH 426
Query: 635 TAAICLH 641
TAA+ H
Sbjct: 427 TAAVLEH 433
Score = 349 (127.9 bits), Expect = 8.2e-31, P = 8.2e-31
Identities = 109/344 (31%), Positives = 158/344 (45%)
Query: 312 TKQGQIFS--WGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
++ G+ F+ WG G G+LG G D + P + AL+ +I VACG HT +T +
Sbjct: 44 SESGKRFAAMWGSGDYGRLGLG-NLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRR 102
Query: 369 LYTWGDGIHNLGLLGQVSEI-SHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++ G+++ G LG VS++ SH + P +VSG + I I G +H+AAIT G+L+
Sbjct: 103 VFA--TGLNDCGQLG-VSDVKSHAMDPLEVSGLDK--DILHISAGYYHSAAITVDGELYM 157
Query: 427 FGDGTFGALGHGDRSS--TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
+G + G LG G +++ VP +VE L + + G H+ A+ T G LS
Sbjct: 158 WGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAV------TDGGEVLS 211
Query: 485 SKKLFTWGDGAEGQLGHGD---------AEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
WG G G+LGHG + P +K + I VA G +
Sbjct: 212 ------WGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTD 265
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G F G ++G G I + Y E++ACG YH VV+ E+YTW
Sbjct: 266 ENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP--YAEEVACGGYHTCVVTRGGELYTW 323
Query: 596 GKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAAI 638
G NG LG +P VE + V V CG TAAI
Sbjct: 324 GSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSCGWKHTAAI 367
Score = 279 (103.3 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 80/260 (30%), Positives = 120/260 (46%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS-------- 337
+P +E+ + QS+A GS+H+V VT G++ SWG G G+LGHG ++ +
Sbjct: 178 VPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSE 237
Query: 338 -YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD-GIHNLGLLGQVSEISHWIPRK 395
P+LI L G + VA G H+ +G + +G+ I+ +G G V + P
Sbjct: 238 FTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGF-GGVRNAT--TPSI 294
Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKE 454
+S E + CG +HT +T G+L+T+G G LG + P VE E
Sbjct: 295 IS---EVPYAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLE 351
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
SCG HTAAI + T G G S G + GQLGHG P V
Sbjct: 352 STVSQVSCGWKHTAAISDNNVFTWGWGG-SHGTFSVDGHSSGGQLGHGSDVDYARPAMVD 410
Query: 515 VSDDISFCKVACGHSITIAL 534
+ ++ ++CG + T A+
Sbjct: 411 LGKNVRAVHISCGFNHTAAV 430
Score = 272 (100.8 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 88/313 (28%), Positives = 144/313 (46%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVA 354
D I+ G H+ +T G+++ WG+ S G+LG G +A V P ++AL+G I VA
Sbjct: 135 DILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVA 194
Query: 355 CGEFHTCAVTLSGDLYTWGDGI-------HNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
G H+ AVT G++ +WG G H L G + S + PR + ++EG+++++
Sbjct: 195 LGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIK-ELEGIKVTN 253
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
+ G H+A G F FG+ + +G G + + P + + + V +CG +HT
Sbjct: 254 VAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVPYAEEV--ACGGYHT 311
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD-DISFCKVAC 526
+ T G +L+TWG G LG P+ V+ + + +V+C
Sbjct: 312 CVV------TRGG------ELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVSQVSC 359
Query: 527 GHSITIALTAT--------GQ--VFSM-GSADYGQLGSPGSTGKF--PTRIEGNIKHRYI 573
G T A++ G FS+ G + GQLG GS + P ++ R +
Sbjct: 360 GWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGH-GSDVDYARPAMVDLGKNVRAV 418
Query: 574 EDIACGSYHIAVV 586
I+CG H A V
Sbjct: 419 H-ISCGFNHTAAV 430
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 414 (150.8 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 109/336 (32%), Positives = 168/336 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+V + +ACG H+V + + G++++ G + G+LGH E + + P+ I AL
Sbjct: 25 PQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALA 82
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQI 405
+I VACGE H+ A++ G L++WG G LGL+ +E S +PR + ++ I
Sbjct: 83 DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTI 139
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCG 463
+ CG WH A+ + G+ FT+G + G LG G S TS P+ V +L+ + + G
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS-PQRVRSLEGIPLAQVAAG 198
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
H+ A+ SG+ +F WG GQLG D + R P VK+
Sbjct: 199 GAHSFAL-----SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH- 582
++CG T LT +G VF+ G+ GQLG + R + + IACG H
Sbjct: 247 ISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHT 306
Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
+A+V S +Y +G GA GQLG G N + P+ V+
Sbjct: 307 LALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
Score = 370 (135.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 101/333 (30%), Positives = 166/333 (49%)
Query: 320 WGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+ G ++ V+ P++ ++ +I VACG H+ + G++YT G ++
Sbjct: 4 WGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG--VN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG- 436
G LG E + P ++ G + I + CG H+ A++ G+LF++G G+ G LG
Sbjct: 62 TKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
S +VPR ++ L + + SCG WH A+ ++G + FTWG +
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA--------ADG----QFFTWGKNSH 166
Query: 497 GQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP 554
GQLG G P + P V+ + I +VA G + + AL+ +G VF G + GQLG S
Sbjct: 167 GQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++ P
Sbjct: 227 EKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG T A+ G+ A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318
Score = 293 (108.2 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 75/219 (34%), Positives = 116/219 (52%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLID 343
L+ K+ + T++ ++CG+ H + + GQ F+WG+ S G+LG G E + P+ +
Sbjct: 130 LIQKLNQQTIL----QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVR 185
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+L G + VA G H+ A++LSG ++ WG ++N G LG E P V +
Sbjct: 186 SLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLSDEKDRESPCHVK-LLRTQ 242
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I CG HTA +T +G +FTFG G+ G LGH + PR V L + +CG
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
HT A+V S+GL ++ +G GA+GQLG G
Sbjct: 303 RQHTLALVP-------SSGL----IYAFGCGAKGQLGTG 330
Score = 161 (61.7 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 43/120 (35%), Positives = 61/120 (50%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
DR K+L + V+ I+CG +H ++TK G +F++G GS G+LGH D P
Sbjct: 229 DRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y +G G G LG + P V G
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAK--GQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 415 (151.1 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 106/323 (32%), Positives = 164/323 (50%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ +ACG H+V + + G++++ G + G+LGH E + + P+ I AL +I VACGE
Sbjct: 37 KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGES 94
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A++ G L++WG G LGL+ +E S +PR + ++ I + CG WH A
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151
Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
+ + G+ FT+G + G LG G + S + P+ V +L+ + + G H+ A+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
SG+ +F WG GQLG D E R P VK+ ++CG T LT
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
+G VF+ G+ GQLG + R + + IACG H +A V S +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 596 GKGANGQLGHGDNENKQTPTLVE 618
G GA GQLG G N + P+ V+
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVK 342
Score = 369 (135.0 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 100/333 (30%), Positives = 165/333 (49%)
Query: 320 WGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+ G ++ V+ P++ ++ ++ VACG H+ + G++YT G ++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG--LN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG- 436
G LG E + P ++ G + I + CG H+ A++ G+LF++G G+ G LG
Sbjct: 62 TKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
S +VPR ++ L + + SCG WH A+ ++G + FTWG +
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA--------ADG----QFFTWGKNSH 166
Query: 497 GQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP 554
GQLG G P + P V+ + I +VA G + + AL+ +G VF G + GQLG S
Sbjct: 167 GQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++ P
Sbjct: 227 EEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG T A G+ A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Score = 293 (108.2 bits), Expect = 5.6e-22, P = 5.6e-22
Identities = 75/219 (34%), Positives = 115/219 (52%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLID 343
L+ K+ + T++ ++CG+ H + + GQ F+WG+ S G+LG G E + P+ +
Sbjct: 130 LIQKLNQQTIL----QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVR 185
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+L G + VA G H+ A++LSG ++ WG ++N G LG E P V +
Sbjct: 186 SLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLSDEEDRESPCHVK-LLRTQ 242
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I CG HTA +T +G +FTFG G+ G LGH + PR V L + +CG
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
HT A V S+GL ++ +G GA+GQLG G
Sbjct: 303 RQHTLAFVP-------SSGL----IYAFGCGAKGQLGTG 330
Score = 226 (84.6 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 52/165 (31%), Positives = 83/165 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ + S + +A G H+ ++ G +F WG + G+LG E D P + L
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR 240
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ ++CGE HT +T SG ++T+G G + G LG S PR+V ++ G +++
Sbjct: 241 TQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
I CG HT A + S+G ++ FG G G LG G + P V+
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
Score = 162 (62.1 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 54/170 (31%), Positives = 80/170 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
DR K+L + V+ I+CG +H ++TK G +F++G GS G+LGH D P
Sbjct: 229 DRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y +G G G LG + P V G
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK--GQLGTGHTCNVKCPSPVKG 343
Query: 399 QMEGL--QISSICCG-PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
Q+S+ +H ++F+ GD TF + SS +V
Sbjct: 344 YWAAHSGQLSARADRFKYHIVK-----QIFSGGDQTFVLCSKYENSSPAV 388
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 410 (149.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 105/323 (32%), Positives = 163/323 (50%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ +ACG H+V + + G++++ G + G+LGH E + + P+ I AL +I VACGE
Sbjct: 37 KEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 94
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A++ G L++WG G LGL+ +E S +PR + ++ I + CG WH A
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151
Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
+ + G+ FT+G + G LG G S + P+ V +L+ + + G H+ A+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
SG+ +F WG GQLG D + R P VK+ ++CG T LT
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
+G VF+ G+ GQLG + R + + IACG H +A V S +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 596 GKGANGQLGHGDNENKQTPTLVE 618
G GA GQLG G N + P+ V+
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342
Score = 368 (134.6 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 100/333 (30%), Positives = 165/333 (49%)
Query: 320 WGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+ G ++ V+ P++ ++ ++ VACG H+ + G++YT G ++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG--LN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG- 436
G LG E + P ++ G + I + CG H+ A++ G+LF++G G+ G LG
Sbjct: 62 TKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
S +VPR ++ L + + SCG WH A+ ++G + FTWG +
Sbjct: 119 MTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA--------ADG----QFFTWGKNSH 166
Query: 497 GQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP 554
GQLG G P + P V+ + I +VA G + + AL+ +G VF G + GQLG S
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++ P
Sbjct: 227 EKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG T A G+ A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Score = 292 (107.8 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 75/219 (34%), Positives = 114/219 (52%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLID 343
L+ K+ + T++ ++CG+ H + + GQ F+WG+ S G+LG G E + P+ +
Sbjct: 130 LIQKLNQQTIL----QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 185
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+L G + VA G H+ A++LSG ++ WG ++N G LG E P V +
Sbjct: 186 SLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLSDEKDRESPCHVK-LLRTQ 242
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I CG HTA +T +G +FTFG G+ G LGH + PR V L + +CG
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
HT A V S+GL ++ +G GA GQLG G
Sbjct: 303 RQHTLAFVP-------SSGL----IYAFGCGARGQLGTG 330
Score = 226 (84.6 bits), Expect = 9.7e-15, P = 9.7e-15
Identities = 52/165 (31%), Positives = 83/165 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ + S + +A G H+ ++ G +F WG + G+LG E D P + L
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 240
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ ++CGE HT +T SG ++T+G G + G LG S PR+V ++ G +++
Sbjct: 241 TQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
I CG HT A + S+G ++ FG G G LG G + P V+
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 162 (62.1 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 43/120 (35%), Positives = 61/120 (50%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
DR K+L + V+ I+CG +H ++TK G +F++G GS G+LGH D P
Sbjct: 229 DRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y +G G G LG + P V G
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR--GQLGTGHTCNVKCPSPVKG 343
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 409 (149.0 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 106/348 (30%), Positives = 163/348 (46%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + + + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKA 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWI 392
P+ + AL+ NI V+CGE HT A+ G +Y WG DG LGL G I +
Sbjct: 72 RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDG--QLGLPGTEECIR--V 127
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVET 451
PR + E +QI + CG +H+ A++ ++F++G +G LG G + + P +++
Sbjct: 128 PRNIKSLSE-IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS 186
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
L + + G H+ + SG+ +F WG GQLG D R VP
Sbjct: 187 LLGIPFAQIAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDDNDRYVPT 234
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR 571
+K + CG T ALT G VF+ G+ YGQLG ++ + R +
Sbjct: 235 LLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGS 294
Query: 572 YIEDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
+ I CG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 295 LVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342
Score = 386 (140.9 bits), Expect = 4.5e-32, P = 4.5e-32
Identities = 101/329 (30%), Positives = 161/329 (48%)
Query: 320 WGEGSGGKLG-HGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+LG G++ ++ P+ D I V CG HT V G +YT G +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG--CN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG- 436
+LG LG E + P V G ++ I ++ CG HT A+ G+++ +G T G LG
Sbjct: 62 DLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGL 118
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G VPR +++L E++ V +CG +H+ A+ + GS ++F+WG
Sbjct: 119 PGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL------SKGS------EVFSWGQNKY 166
Query: 497 GQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GQLG G + + + P +K I F ++A G + + LT +G +F G +GQLG
Sbjct: 167 GQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 556 STGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
++ PT ++ +++ + + I CG H A ++ + V+T+G G GQLGH ++ P
Sbjct: 227 DNDRYVPTLLK-SLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKG 643
V L V + CG T A G
Sbjct: 286 RKVFELMGSLVTQITCGRQHTTAFVPSSG 314
Score = 300 (110.7 bits), Expect = 9.8e-23, P = 9.8e-23
Identities = 88/277 (31%), Positives = 130/277 (46%)
Query: 372 WGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
WG+ LGL G + E PRK S +I + CG HT + G ++T G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRK-SDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCN 61
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH + P V L V SCG HT A+ G +++
Sbjct: 62 DLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLAL--------NDKG----QVYA 107
Query: 491 WGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG +GQLG E + VP +K +I +VACG+ ++AL+ +VFS G YG
Sbjct: 108 WGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167
Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG K P I+ + + + IA G H V++ ++ WG+ GQLG D
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
+ ++ PTL+++LR ++V + CG + TAA+ GV
Sbjct: 227 DNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263
Score = 232 (86.7 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 68/222 (30%), Positives = 106/222 (47%)
Query: 424 LFTFGDGTFGALGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
+ +G+ +FG LG G D PR+ + + CG+ HT +++ G+
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLD-----DGT- 54
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
++T G GQLGH A R P V D + V+CG + T+AL GQV+
Sbjct: 55 ------VYTCGCNDLGQLGHEKARKR--PEHVGALDAQNIVAVSCGEAHTLALNDKGQVY 106
Query: 542 SMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
+ G A GQLG PG+ + P I+ ++ I +ACG YH +S SEV++WG+
Sbjct: 107 AWGLATDGQLGLPGTEECIRVPRNIK-SLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165
Query: 600 NGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAICL 640
GQLG G KQ +P ++++L + G + + L
Sbjct: 166 YGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTL 207
Score = 188 (71.2 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 50/163 (30%), Positives = 81/163 (49%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSD---DISFCKVACGHSITIALTATGQVFSMG 544
+ WG+ + GQLG G + +V L + SD + V CG T+ + G V++ G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIV-LEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
D GQLG + K P + G + + I ++CG H ++ K +VY WG +GQLG
Sbjct: 60 CNDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117
Query: 605 -HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
G E + P +++L + Q+ V CG + ++ L KG +
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACG--YYHSLALSKGSEV 158
Score = 180 (68.4 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 56/184 (30%), Positives = 85/184 (46%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +L+S I CG H +TK+G +F++G G G+LGH + P
Sbjct: 226 DDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + + CG HT A V SG +Y++G G + G LG + + P V G
Sbjct: 286 RKVFELMGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGN--GQLGTGTTSNRKSPFTVKG 343
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP----REVETLKE 454
L S+ C P + ++F+ GD +F H VP R + LK+
Sbjct: 344 NW--LPYSTQCLIPADSEQYYCVKRIFSGGDQSFA---HYFYPQNMVPPDDFRYPDLLKQ 398
Query: 455 LKTV 458
+ TV
Sbjct: 399 IWTV 402
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 401 (146.2 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 107/356 (30%), Positives = 172/356 (48%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ +ACG++H++ + G +++ G S G+LGH + S P+L+ AL+ I V+CG+
Sbjct: 37 KEVACGNQHSLFLLHDGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQA 94
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ AV G ++ WG G LGL G E +PR + E +IS + CG H A
Sbjct: 95 HSLAVNEQGQVFAWGAGDGGQLGL-GTAEEAVR-VPRLIKKLCEH-RISQVMCGNHHCIA 151
Query: 418 ITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
++ G+LF +G+ + G LG G ST P+ +++L + S G H+ A+
Sbjct: 152 LSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFAL-----S 206
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
SG+ +F WG + GQLG D + R VP +K ++CG T ALT
Sbjct: 207 FSGA-------VFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTK 259
Query: 537 TGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
G +F+ G+ GQLG + + P R+ + + IACG H +A V S +Y
Sbjct: 260 EGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIYA 318
Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
+G GQLG G + ++P V ++ + + + +H G DH+
Sbjct: 319 FGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHCTIAKIHSG---GDHN 371
Score = 384 (140.2 bits), Expect = 7.3e-32, P = 7.3e-32
Identities = 103/332 (31%), Positives = 156/332 (46%)
Query: 320 WGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN 378
WG G+LG G EA V P+ +G + VACG H+ + G +YT G ++
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS--NS 62
Query: 379 LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
G LG S P V G ++ +IS + CG H+ A+ G++F +G G G LG G
Sbjct: 63 CGQLGHDKGGSR--PELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG 119
Query: 439 D-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
+ VPR ++ L E + CG H A+ +G +LF WG+ + G
Sbjct: 120 TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIAL--------SKDG----QLFVWGENSSG 167
Query: 498 QLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
QLG G EP + P +K I +++ G + AL+ +G VF G GQLG
Sbjct: 168 QLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDE 227
Query: 557 TGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
+ P I+ ++ + + I+CG H A ++ + ++T+G G+ GQLGH N+ P
Sbjct: 228 QDRAVPCHIKF-LRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPR 286
Query: 616 LVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG N T A G+ A
Sbjct: 287 RVMELMGTEVSQIACGRNHTLAFVPSTGLIYA 318
Score = 380 (138.8 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 102/304 (33%), Positives = 154/304 (50%)
Query: 296 LDAQSIA---CGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIH 351
LDAQ I+ CG H++ V +QGQ+F+WG G GG+LG G E V P+LI L I
Sbjct: 81 LDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRIS 140
Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHN-LGL-LGQVSEISHWIPRKVSGQMEGLQISSIC 409
V CG H A++ G L+ WG+ LGL G+ S +S P+ + + G+ ++ I
Sbjct: 141 QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS---PQPLKS-LCGIPLTQIS 196
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
G H+ A++ +G +F +G + G LG D +VP ++ L+ K V SCG HTAA
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAA 256
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
+ + G LFT+G+G++GQLGH +P V ++ACG +
Sbjct: 257 LTKEGG------------LFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRN 304
Query: 530 ITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVV 586
T+A +TG +++ G GQLG+ G G K P + NI+ I + + H +
Sbjct: 305 HTLAFVPSTGLIYAFGCNTQGQLGT-GIRGSAKSPVPVS-NIQPLCIGNAYTRTEHCTIA 362
Query: 587 SSKS 590
S
Sbjct: 363 KIHS 366
Score = 294 (108.6 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 79/254 (31%), Positives = 124/254 (48%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDA 344
+P++++ + CG+ H + ++K GQ+F WGE S G+LG G E P+ + +
Sbjct: 127 VPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKS 186
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L G + ++ G H+ A++ SG ++ WG ++ G LG E +P + + +
Sbjct: 187 LCGIPLTQISAGGDHSFALSFSGAVFGWGK--NSAGQLGLNDEQDRAVPCHIKF-LRSQK 243
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG HTAA+T G LFTFG+G+ G LGH + +PR V L + +CG
Sbjct: 244 VVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGR 303
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG---HGDAE-P----RVVPLCV-KV 515
HT A V S GL ++ +G +GQLG G A+ P + PLC+
Sbjct: 304 NHTLAFVP-------STGL----IYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNA 352
Query: 516 SDDISFCKVACGHS 529
C +A HS
Sbjct: 353 YTRTEHCTIAKIHS 366
Score = 263 (97.6 bits), Expect = 9.8e-19, P = 9.8e-19
Identities = 61/172 (35%), Positives = 92/172 (53%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
L P+ L+S + I+ G H+ ++ G +F WG+ S G+LG E D + P I
Sbjct: 179 LSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKF 238
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L + ++CGE HT A+T G L+T+G+G + G LG S + +PR+V ++ G +
Sbjct: 239 LRSQKVVYISCGEEHTAALTKEGGLFTFGNG--SKGQLGHDSTRNEPLPRRVM-ELMGTE 295
Query: 405 ISSICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
+S I CG HT A + S G ++ FG T G LG G R S P V ++ L
Sbjct: 296 VSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347
Score = 212 (79.7 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 50/153 (32%), Positives = 77/153 (50%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+ WG GQLG G +E V P V D +VACG+ ++ L G V++ GS
Sbjct: 2 MLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSN 61
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
GQLG G P + G + + I ++CG H V+ + +V+ WG G GQLG G
Sbjct: 62 SCGQLGHDKG-GSRPELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG 119
Query: 607 DNENK-QTPTLVEALRDKQVKSVVCGSNFTAAI 638
E + P L++ L + ++ V+CG++ A+
Sbjct: 120 TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIAL 152
Score = 164 (62.8 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 55/184 (29%), Positives = 85/184 (46%)
Query: 280 DRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
D +D +P K L S V+ I+CG +H +TK+G +F++G GS G+LGH +
Sbjct: 226 DEQDRAVPCHIKFLRSQKVV---YISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNE 282
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
P+ + L G+ + +ACG HT A V +G +Y +G + G LG S P
Sbjct: 283 PLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFG--CNTQGQLGTGIRGSAKSPVP 340
Query: 396 VSGQMEGLQISSICCGPWHTAAI-TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
VS I +C G +T + K+ + GD F L + S P + L
Sbjct: 341 VSN------IQPLCIGNAYTRTEHCTIAKIHSGGDHNFLLLSTVE--GLSCPDDFRILNT 392
Query: 455 LKTV 458
K++
Sbjct: 393 TKSI 396
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 412 (150.1 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 106/323 (32%), Positives = 163/323 (50%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ +ACG H+V + + G++++ G + G+LGH E + + P+ I AL +I VACGE
Sbjct: 37 KEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADEHIVHVACGES 94
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A++ G L++WG G LGL+ +E S +PR + ++ I + CG WH A
Sbjct: 95 HSLALSDRGQLFSWGAGSDGQLGLM--TTEESVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151
Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
+ + G+ FT+G + G LG G S + P+ V +L+ + + G H+ A+
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
SG+ +F WG GQLG D E R P VK+ ++CG T LT
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTK 259
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
+G VF+ G+ GQLG + R + + IACG H +A V S +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 596 GKGANGQLGHGDNENKQTPTLVE 618
G GA GQLG G N + P+ V+
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342
Score = 367 (134.2 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 100/333 (30%), Positives = 165/333 (49%)
Query: 320 WGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+ G ++ V+ P++ ++ ++ VACG H+ + G++YT G ++
Sbjct: 4 WGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG--LN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG- 436
G LG E + P ++ G + I + CG H+ A++ G+LF++G G+ G LG
Sbjct: 62 TKGQLGHEREGNK--PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGL 118
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
S +VPR ++ L + + SCG WH A+ ++G + FTWG +
Sbjct: 119 MTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALA--------ADG----QFFTWGKNSH 166
Query: 497 GQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP 554
GQLG G P + P V+ + I +VA G + + AL+ +G VF G + GQLG S
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++ P
Sbjct: 227 EEDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG T A G+ A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Score = 294 (108.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 75/219 (34%), Positives = 114/219 (52%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLID 343
L+ K+ + T++ ++CG+ H + + GQ F+WG+ S G+LG G E + P+ +
Sbjct: 130 LIQKLNQQTIL----QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVR 185
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+L G + VA G H+ A++LSG ++ WG ++N G LG E P V +
Sbjct: 186 SLEGIPLAQVAAGGAHSFALSLSGAVFGWG--MNNAGQLGLSDEEDRESPCHVK-LLRAQ 242
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I CG HTA +T +G +FTFG G+ G LGH + PR V L + +CG
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
HT A V S+GL ++ +G GA GQLG G
Sbjct: 303 RQHTLAFVP-------SSGL----IYAFGCGARGQLGTG 330
Score = 228 (85.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 52/165 (31%), Positives = 83/165 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ + S + +A G H+ ++ G +F WG + G+LG E D P + L
Sbjct: 181 PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR 240
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ ++CGE HT +T SG ++T+G G + G LG S PR+V ++ G +++
Sbjct: 241 AQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
I CG HT A + S+G ++ FG G G LG G + P V+
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 163 (62.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 54/170 (31%), Positives = 80/170 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
DR K+L + V+ I+CG +H ++TK G +F++G GS G+LGH D P
Sbjct: 229 DRESPCHVKLLRAQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y +G G G LG + P V G
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR--GQLGTGHTCNVKCPSPVKG 343
Query: 399 QMEGL--QISSICCG-PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
Q+S+ +H ++F+ GD TF + SS +V
Sbjct: 344 YWAAHSGQLSARADRFKYHIVK-----QIFSGGDQTFVLCSKYENSSPAV 388
Score = 38 (18.4 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 627 SVVCGSNFTAAICLHKGVSI 646
S VC FT + L+KG +
Sbjct: 549 SQVCPKYFTKLVNLYKGAVV 568
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 405 (147.6 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 105/323 (32%), Positives = 161/323 (49%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ +ACG H+V + + G++++ G + G+LGH E + + P+ I AL +I VACGE
Sbjct: 37 KEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIVHVACGES 94
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A++ G L++WG G LGL+ E S +PR + ++ I + CG WH A
Sbjct: 95 HSLALSDQGQLFSWGAGSDGQLGLM--TIEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151
Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
+ + G+ FT+G + G LG G S + P+ V +L+ + G H+ A+
Sbjct: 152 LAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL-----S 206
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
SG+ +F WG GQLG D + R P VK+ ++CG T LT
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
+G VF+ G+ GQLG + R + + IACG H +A V S +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 596 GKGANGQLGHGDNENKQTPTLVE 618
G GA GQLG G N + P+ V+
Sbjct: 320 GCGARGQLGTGHTCNVKCPSPVK 342
Score = 362 (132.5 bits), Expect = 4.0e-28, Sum P(2) = 4.0e-28
Identities = 99/333 (29%), Positives = 164/333 (49%)
Query: 320 WGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
WG S G+ G ++ V+ P++ ++ ++ VACG H+ + G++YT G ++
Sbjct: 4 WGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG--VN 61
Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
G LG E + P ++ G + I + CG H+ A++ G+LF++G G+ G LG
Sbjct: 62 TKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGL 118
Query: 438 GD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
S +VPR ++ L + + SCG WH A+ ++G + FTWG +
Sbjct: 119 MTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA--------ADG----QFFTWGRNSH 166
Query: 497 GQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP 554
GQLG G P + P V+ + I +V G + + AL+ +G VF G + GQLG S
Sbjct: 167 GQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSD 226
Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++ P
Sbjct: 227 EKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
V L +V + CG T A G+ A
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Score = 287 (106.1 bits), Expect = 6.3e-20, Sum P(2) = 6.3e-20
Identities = 74/219 (33%), Positives = 112/219 (51%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLID 343
L+ K+ + T++ ++CG+ H + + GQ F+WG S G+LG G E + P+ +
Sbjct: 130 LIQKLNQQTIL----QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVR 185
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+L G + V G H+ A++LSG ++ WG ++N G LG E P V +
Sbjct: 186 SLEGIPLAQVVAGGAHSFALSLSGAVFGWG--MNNAGQLGLSDEKDRESPCHVK-LLRTQ 242
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I CG HTA +T +G +FTFG G+ G LGH + PR V L + +CG
Sbjct: 243 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACG 302
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
HT A V S+GL ++ +G GA GQLG G
Sbjct: 303 RQHTLAFVP-------SSGL----IYAFGCGARGQLGTG 330
Score = 222 (83.2 bits), Expect = 6.7e-13, Sum P(2) = 6.7e-13
Identities = 51/165 (30%), Positives = 82/165 (49%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ + S + + G H+ ++ G +F WG + G+LG E D P + L
Sbjct: 181 PQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR 240
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ ++CGE HT +T SG ++T+G G + G LG S PR+V ++ G +++
Sbjct: 241 TQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVT 297
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
I CG HT A + S+G ++ FG G G LG G + P V+
Sbjct: 298 QIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
Score = 163 (62.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 54/170 (31%), Positives = 80/170 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
DR K+L + V+ I+CG +H ++TK G +F++G GS G+LGH D P
Sbjct: 229 DRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 285
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y +G G G LG + P V G
Sbjct: 286 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAR--GQLGTGHTCNVKCPSPVKG 343
Query: 399 QMEGL--QISSICCG-PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
Q+S+ +H ++F+ GD TF + SS +V
Sbjct: 344 YWAAHSGQLSARADRFKYHIVK-----QIFSGGDQTFVLCSKYENSSPAV 388
Score = 38 (18.4 bits), Expect = 7.0e-33, Sum P(2) = 7.0e-33
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 627 SVVCGSNFTAAICLHKGVSI 646
S VC FT + L+KG +
Sbjct: 549 SQVCPKYFTKLVNLYKGAVV 568
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 390 (142.3 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 110/339 (32%), Positives = 169/339 (49%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+CG +H LVT+ G++F +G + G+LG G + V+ P + AL + + ACG HT
Sbjct: 41 ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100
Query: 361 CAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T G+LY G LGL G ++ + + + + +G I + G +AA+T
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGL-GDCNDRTSFHLVEFFNK-QG-PIKMLAAGSNTSAALT 157
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ +GD + G +G G S+ P+EV K + V SCG +H+A V V G
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFWV--SCGYYHSA-FVTVDGA--- 211
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
L+T+G+ G+LG A +V + D + +VACG T+ALT
Sbjct: 212 --------LYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV--VQVACGGGHTVALTE 261
Query: 537 TGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
+V+S G +GQLG + P +E K R ++ ACG H A+++ +YT
Sbjct: 262 N-EVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGR-VKHAACGENHTALITDNGLLYT 319
Query: 595 WGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
+G G +G+LG G+ N+ PTL D V SV CG
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358
Score = 307 (113.1 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 90/291 (30%), Positives = 144/291 (49%)
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
++CG+ HT VT +G L+ +G +N G LG ++ + P V ++ ++ CG
Sbjct: 41 ISCGDEHTALVTENGKLFMFGS--NNWGQLGLGTKTTVNKPTCVKA-LKSERVKLTACGR 97
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIV 471
HT TS G L+ G G LG GD + + VE + + M + G +AA+
Sbjct: 98 THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALT 157
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
+ +G +L+ WGD +EGQ+G G + P V V + + V+CG+ +
Sbjct: 158 Q--------DG----RLYMWGDNSEGQIGLGKESNALTPQEVSVGKRVFW--VSCGYYHS 203
Query: 532 IALTATGQVFSMGSADYGQLGSPG---STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+T G +++ G D G+LG + K P ++ +I R ++ +ACG H V +
Sbjct: 204 AFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVT-DIPDRVVQ-VACGGGH-TVALT 260
Query: 589 KSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
++EVY++G G GQLGHG + P +VE R +VK CG N TA I
Sbjct: 261 ENEVYSFGLGQFGQLGHGTFIFESRLPRVVEHFRKGRVKHAACGENHTALI 311
Score = 291 (107.5 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 84/293 (28%), Positives = 143/293 (48%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-IHMVACGEFHT 360
ACG H ++ T +G +++ G + G+LG G D + L++ N I M+A G +
Sbjct: 94 ACGRTHTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTS 153
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A+T G LY WGD ++ G +G E + P++VS G ++ + CG +H+A +T
Sbjct: 154 AALTQDGRLYMWGD--NSEGQIGLGKESNALTPQEVS---VGKRVFWVSCGYYHSAFVTV 208
Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
G L+TFG+ G LG ++ VP++V + + + V +CG HT A+ E
Sbjct: 209 DGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD-RVVQVACGGGHTVALTE------ 261
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA--EPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+++++G G GQLGHG E R+ P V+ ACG + T +T
Sbjct: 262 -------NEVYSFGLGQFGQLGHGTFIFESRL-PRVVEHFRKGRVKHAACGENHTALITD 313
Query: 537 TGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
G +++ G +G+LG T +F + ++ + CG H+ V++
Sbjct: 314 NGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGCHMLVLA 366
Score = 189 (71.6 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 67/222 (30%), Positives = 94/222 (42%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
I +G +FTFG F + + P + LK + SCG HTA + E
Sbjct: 9 IPESGAVFTFGKSKF---------ADNAPSKF-WLKNDVPLRISCGDEHTALVTE----- 53
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
NG KLF +G GQLG G P CVK ACG + T+ T+
Sbjct: 54 ---NG----KLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTLVFTSR 106
Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTR-IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
G +++ G + GQLG + +E K I+ +A GS A ++ +Y WG
Sbjct: 107 GNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGPIKMLAAGSNTSAALTQDGRLYMWG 166
Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ GQ+G G N TP V K+V V CG +A +
Sbjct: 167 DNSEGQIGLGKESNALTPQEVSV--GKRVFWVSCGYYHSAFV 206
Score = 55 (24.4 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 27/148 (18%), Positives = 51/148 (34%)
Query: 701 DDCFIKLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASP 760
+D K ++ E + +SS + EK +++++++ + + +
Sbjct: 1032 NDTMTKHSSEDEEKEKEEKSSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEKSGSSVKA 1091
Query: 761 SLNGKFQWEPNSDFIK--SNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLA-N 817
S + + E N D K S + S + V+ KS + D N
Sbjct: 1092 SSEDEEEEEENGDSFKASSKEESGDSANASNVNSEEEEQKSKSEATDDLESEEEEDNEDN 1151
Query: 818 SEVIFEYSKQTNDNFNQEPDVLRAQLED 845
E E S T D N + D E+
Sbjct: 1152 EEEKSETSASTEDESNDDEDKSETSQEE 1179
Score = 40 (19.1 bits), Expect = 5.7e-31, Sum P(2) = 5.7e-31
Identities = 10/36 (27%), Positives = 22/36 (61%)
Query: 834 QEPDVLRAQLEDLTRKSQFLEVELER-TSRKLKETT 868
+ D ++ Q + T+++Q +EV+ + TS+ +E T
Sbjct: 626 ESSDKVKKQSTEKTQQNQEVEVQRSKGTSKPTQEGT 661
Score = 39 (18.8 bits), Expect = 7.2e-31, Sum P(2) = 7.2e-31
Identities = 30/165 (18%), Positives = 56/165 (33%)
Query: 706 KLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGK 765
K + +S + S + +G E+E S S+ S+ + + S
Sbjct: 1050 KSSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEKSGSSVKASSEDEEEEEENGDSFKAS 1109
Query: 766 FQWEPNSDFIKSNKISASPPGSRRVSRAPSPIS------------RKSSPACSITMNSFT 813
+ E + D ++ +++ + S A + KS + S S
Sbjct: 1110 SK-EESGDSANASNVNSEEEEQKSKSEATDDLESEEEEDNEDNEEEKSETSASTEDESND 1168
Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELE 858
D SE E N E R++ +D +S+ E E+E
Sbjct: 1169 DEDKSETSQEEESGEESEGNSESRSERSEEDDEDEESEKEESEVE 1213
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 388 (141.6 bits), Expect = 2.6e-32, P = 2.6e-32
Identities = 115/375 (30%), Positives = 189/375 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ LE+ L A G +H++L+ +++S G+ S G+LG P+ I AL+
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQI 405
+I +V+CG+ H+ AV G ++TWG G LG+ G+ EIS ++P K++ + G++I
Sbjct: 79 TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEIS-FMPTKINS-LAGIKI 135
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGV 464
+ CG +H+ A++ G++F++G G LG G+ S + P++V++L+ + + G
Sbjct: 136 IQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGG 195
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISF 521
H+ A+ + G TS F WG+ GQL G+ E P + ++
Sbjct: 196 THSFAL-SLMG-TS----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNV 243
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGS 580
++CG+ T LT GQVF+ G + QL SP S P IEG H + I CGS
Sbjct: 244 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGS 301
Query: 581 YH-IAVVSSKSEVYTWGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS--N 633
YH IA V + +V + G+G + H + L+ A L D +VK + G+ N
Sbjct: 302 YHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHAN 361
Query: 634 FTAAICLH-KGVSIA 647
F C H + S++
Sbjct: 362 FVTT-CRHTRSTSVS 375
Score = 248 (92.4 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 57/195 (29%), Positives = 97/195 (49%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLI 342
+ +P + S + ++CG H++ +++ GQ+FSWG G+LG G + P+ +
Sbjct: 121 SFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 180
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQME 401
+L G + VA G H+ A++L G + WG+ L L G ++ + P + G ++
Sbjct: 181 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI-GALK 239
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
L + I CG HT+ +T G++FTFG + L H RS P+ +E +
Sbjct: 240 TLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIE 298
Query: 462 CGVWHTAAIVEVAGK 476
CG +HT A V G+
Sbjct: 299 CGSYHTIAYVYTTGQ 313
Score = 163 (62.4 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 44/138 (31%), Positives = 69/138 (50%)
Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFP 561
A R P ++ + K A G ++ L + +V+S G GQLG SP ST K P
Sbjct: 13 APGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQST-KRP 71
Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEAL 620
I+ + +I+ ++CG H V + V+TWG G+ GQLG G++ E PT + +L
Sbjct: 72 EPIQA-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL 130
Query: 621 RDKQVKSVVCGSNFTAAI 638
++ V CG + A+
Sbjct: 131 AGIKIIQVSCGHYHSLAL 148
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 387 (141.3 bits), Expect = 3.2e-32, P = 3.2e-32
Identities = 113/361 (31%), Positives = 185/361 (51%)
Query: 287 PKVLES-TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
P+ L++ T ++ A G H++L+ +++S G+ S G+LG + P+ I AL
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQ 404
N ++ +V+CG+ H+ AV G ++ WG G LG+ G+ EIS ++P K+ + G++
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGI-GEFKEIS-FMPTKIKA-LAGIK 128
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCG 463
I + CG +H+ A++ G +F++G + G LG G S S ++P++V++L+ + + G
Sbjct: 129 IIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAG 188
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDIS 520
H+ A+ + G TS F WG GQL G+ E P + ++S
Sbjct: 189 GTHSFAL-SLTG-TS----------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLS 236
Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACG 579
++CG+ T LT GQVF+ G GQL SP S + P IEG I R + I C
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGR-VSQIECA 294
Query: 580 SYH-IAVVSSKSEVYTWGKG----ANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS 632
SYH IA V + +V + G+G +N EN L+ A L D +VK + G+
Sbjct: 295 SYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGA 354
Query: 633 N 633
+
Sbjct: 355 H 355
Score = 281 (104.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 73/252 (28%), Positives = 121/252 (48%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR++ G+++ G H+ + S ++++ GD ++G LG ST P ++ L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPL 511
+L + SCG H+ A+ G K+F WG G+EGQLG G+ E +P
Sbjct: 72 NDLHVDLVSCGKEHSVAVCH--------KG----KVFAWGAGSEGQLGIGEFKEISFMPT 119
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGK-FPTRIEGNIK 569
+K I +V+CGH ++AL+ G VFS G GQLG S + P +++ +++
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK-SLE 178
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT---PTLVEALRDKQVK 626
+ +A G H +S + WG +GQL N+ K+ P + AL++ V
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238
Query: 627 SVVCGSNFTAAI 638
+ CG TA +
Sbjct: 239 YISCGYEHTAVL 250
Score = 247 (92.0 bits), Expect = 4.9e-17, P = 4.9e-17
Identities = 56/195 (28%), Positives = 98/195 (50%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLI 342
+ +P +++ + ++CG H++ +++ G +FSWG S G+LG G + + P+ +
Sbjct: 115 SFMPTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKV 174
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQME 401
+L G + VA G H+ A++L+G + WG L L G + + P + G ++
Sbjct: 175 KSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALK 233
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
L + I CG HTA +T G++FTFG + G L RS P+ +E + +
Sbjct: 234 NLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIE 292
Query: 462 CGVWHTAAIVEVAGK 476
C +HT A V G+
Sbjct: 293 CASYHTIAYVYTTGQ 307
Score = 153 (58.9 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 40/153 (26%), Positives = 73/153 (47%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL---GHGVEADVSY 338
R +P+ ++S + +A G H+ ++ G F WG G+L G+ V+ +
Sbjct: 166 RSQAIPQKVKSLEGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYK 225
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
P I AL ++ ++CG HT +T G ++T+G ++ G L P+ + G
Sbjct: 226 PHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGG--NSSGQLQPSPRSGQRGPQLIEG 283
Query: 399 QMEGLQISSICCGPWHTAA-ITSAGKLFTFGDG 430
G ++S I C +HT A + + G++ + G G
Sbjct: 284 I--GGRVSQIECASYHTIAYVYTTGQVVSLGRG 314
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 382 (139.5 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 105/339 (30%), Positives = 165/339 (48%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
L P + T Q +ACG +H + +T G++++ G +LGH + P LI
Sbjct: 29 LTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSNDYSQLGH--DLPTKRPLLIPE 86
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS--EISHWIPRKVSGQMEG 402
L I + CG H+ A++ G + +WGD ++ G LG + EI +P KV Q+
Sbjct: 87 LQDYVIIQICCGSRHSLALSDWGQVLSWGD--NDCGQLGHATDKEIVQ-LP-KVVRQLVT 142
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALG---HGDRSSTSVPREVETLKELKTVM 459
+ I CG H+ A+TS G+L+++G +G LG D + + P + TL +
Sbjct: 143 KTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAA 202
Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
+CG H+ I + SG+ +F WG GQLG D R P +K +
Sbjct: 203 IACGGNHSFLISK-----SGA-------VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTL 250
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
VACG ++ LT G VF+ G+ YGQLG S+ + R+ + I +ACG
Sbjct: 251 GVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACG 310
Query: 580 SYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
+ H +A+V S+ VY +G G++GQLG ++ P +V
Sbjct: 311 NRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 370 (135.3 bits), Expect = 2.5e-30, P = 2.5e-30
Identities = 87/277 (31%), Positives = 152/277 (54%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYP 339
+R L+P+ L+ V++ I CGS+H++ ++ GQ+ SWG+ G+LGH + + V P
Sbjct: 79 KRPLLIPE-LQDYVIIQ---ICCGSRHSLALSDWGQVLSWGDNDCGQLGHATDKEIVQLP 134
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHW-IPRKVS 397
K++ L + +ACG H+ A+T G+LY+WG I+ LG+ ++++H P +++
Sbjct: 135 KVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGV-NSPNDLTHCNYPLRLT 193
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
+ G+ +++I CG H+ I+ +G +F +G G LG D ++ S P +++TL+ L
Sbjct: 194 TLL-GIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGV 252
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
+CG + + G +FT G GA GQLGHG + ++P V
Sbjct: 253 RFVACGDEFSVFLTNEGG------------VFTCGAGAYGQLGHGFSSNEMLPRMVMELM 300
Query: 518 DISFCKVACGHSITIALTAT-GQVFSMGSADYGQLGS 553
+ +VACG+ T+AL + G+V++ G GQLG+
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGT 337
Score = 367 (134.2 bits), Expect = 5.3e-30, P = 5.3e-30
Identities = 97/338 (28%), Positives = 162/338 (47%)
Query: 316 QIFSWGEGSGGKLG-HGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+++ WG S G+LG G+E + + P I + + VACG HT +T +G +Y G
Sbjct: 6 ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65
Query: 374 DGIHNLGLLGQVSEISHWIPRK---VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+ S++ H +P K + +++ I ICCG H+ A++ G++ ++GD
Sbjct: 66 SNDY--------SQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117
Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
G LGH D+ +P+ V L V +CG H+ A+ S +L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT------------SCGELY 165
Query: 490 TWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+WG GQLG D PL + I +ACG + + ++ +G VF G
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
+ GQLG T + +PT+++ ++ + +ACG ++++ V+T G GA GQLGH
Sbjct: 226 NCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
G + N+ P +V L + V CG+ T A+ +G
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 322
Score = 321 (118.1 bits), Expect = 5.3e-25, P = 5.3e-25
Identities = 87/286 (30%), Positives = 137/286 (47%)
Query: 366 SG-DLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
SG +LY WG H LGL G + + P ++ + + + CG HT +T+ GK
Sbjct: 3 SGKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPD-TAVQQVACGHRHTLFLTATGK 60
Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
++ G + LGH T P + L++ + CG H+ A+ +
Sbjct: 61 VYACGSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSDWG--------- 109
Query: 484 SSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
++ +WGD GQLGH D E +P V+ + ++ACG++ ++ALT+ G+++S
Sbjct: 110 ---QVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166
Query: 543 MGSADYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
GS YGQLG SP +P R+ + + IACG H ++S V+ WG+
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
GQLG D N+ PT ++ LR V+ V CG F+ + GV
Sbjct: 226 NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271
Score = 289 (106.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 72/239 (30%), Positives = 117/239 (48%)
Query: 278 SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
+ D+ LPKV+ V IACG+ H++ +T G+++SWG G+LG D++
Sbjct: 125 ATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLT 184
Query: 338 ---YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
YP + L G + +ACG H+ ++ SG ++ WG +N G LG E + P
Sbjct: 185 HCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR--NNCGQLGLNDETNRSYPT 242
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
++ + L + + CG + +T+ G +FT G G +G LGHG S+ +PR V L
Sbjct: 243 QLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMG 301
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+CG HT A+V G+ ++ +G G+ GQLG + ++P V
Sbjct: 302 STITQVACGNRHTLALVPSRGR-----------VYAFGLGSSGQLGTRSTKSLMLPQVV 349
Score = 182 (69.1 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D + P L++ L + +ACG + +V +T +G +F+ G G+ G+LGHG ++ P
Sbjct: 234 DETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLP 293
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+++ L GS I VACG HT A+ S G +Y +G G + G LG S S +P+ V G
Sbjct: 294 RMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLG--SSGQLGTRSTKSLMLPQVVIG 351
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 376 (137.4 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 116/377 (30%), Positives = 190/377 (50%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL-IDAL 345
P+ LE+ L A G +H++L+ +++S G+ S G+LG P+ I AL
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEEPIQAL 78
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQ 404
+ +I +V+CG+ H+ AV G ++TWG G LG+ G+ EIS ++P K++ + G++
Sbjct: 79 STVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGI-GESKEIS-FMPTKINS-LAGIK 135
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCG 463
I + CG +H+ A++ G++F++G G LG G+ S + P++V++L+ + + G
Sbjct: 136 IIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAG 195
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGD---AEPRVVPLCVKVSDDI 519
H+ A+ + G TS F WG+ GQL G+ AE P + +
Sbjct: 196 GTHSFAL-SLMG-TS----------FGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTL 243
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIAC 578
+ ++CG+ T LT GQVF+ G + QL SP S P IEG H + I C
Sbjct: 244 NVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIEC 301
Query: 579 GSYH-IAVVSSKSEVYTWGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS- 632
GSYH IA V + +V + G+G + H + L+ A L D +VK + G+
Sbjct: 302 GSYHTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAH 361
Query: 633 -NFTAAICLH-KGVSIA 647
NF C H + S++
Sbjct: 362 ANFVTT-CRHTRSTSVS 377
Score = 327 (120.2 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 93/323 (28%), Positives = 157/323 (48%)
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
P+ ++A G + A GE H+ + + +Y+ GD ++ G LGQ S S P +
Sbjct: 19 PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGD--NSRGQLGQKSPQSTKRPEEPIQ 76
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS-VPREVETLKELKT 457
+ + I + CG H+ A+ G++FT+G G+ G LG G+ S +P ++ +L +K
Sbjct: 77 ALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKI 136
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE-PRVVPLCVKVS 516
+ SCG +H+ A+ E +G ++F+WG +GQLG G+ + P VK
Sbjct: 137 IQVSCGHYHSLALSE--------DG----QVFSWGSNRQGQLGLGNNLCSQASPQKVKSL 184
Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK----FPTRIEGNIKHRY 572
+ I +VA G + + AL+ G F G+ GQL G++ K + G +K
Sbjct: 185 EGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSIGALKTLN 244
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
+ I+CG H +V++ +V+T+G ++ QL H + P L+E + V + CGS
Sbjct: 245 VVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGS 303
Query: 633 NFTAAICLHKG--VSIADHSICS 653
T A G VS+ C+
Sbjct: 304 YHTIAYVYTTGQVVSLGRGPSCT 326
Score = 244 (91.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 57/196 (29%), Positives = 97/196 (49%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLI 342
+ +P + S + ++CG H++ +++ GQ+FSWG G+LG G + P+ +
Sbjct: 122 SFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKV 181
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISH-WIPRKVSGQM 400
+L G + VA G H+ A++L G + WG+ L L G ++ + P + G +
Sbjct: 182 KSLEGIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKAEQIYKPHSI-GAL 240
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
+ L + I CG HT+ +T G++FTFG + L H RS P+ +E +
Sbjct: 241 KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQI 299
Query: 461 SCGVWHTAAIVEVAGK 476
CG +HT A V G+
Sbjct: 300 ECGSYHTIAYVYTTGQ 315
Score = 158 (60.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 42/138 (30%), Positives = 68/138 (49%)
Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFP 561
A R P ++ + K A G ++ L + +V+S G GQLG SP ST +
Sbjct: 13 APGRRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPE 72
Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEAL 620
I+ + +I+ ++CG H V + V+TWG G+ GQLG G++ E PT + +L
Sbjct: 73 EPIQA-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSL 131
Query: 621 RDKQVKSVVCGSNFTAAI 638
++ V CG + A+
Sbjct: 132 AGIKIIQVSCGHYHSLAL 149
Score = 134 (52.2 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 29/100 (29%), Positives = 53/100 (53%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
+SA P + + L+ I+CG +H ++T+ GQ+F++G S +L H +
Sbjct: 224 NSAKAEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGR 283
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
P+LI+ + G ++ + CG +HT A V +G + + G G
Sbjct: 284 GGPQLIEGIGG-HVSQIECGSYHTIAYVYTTGQVVSLGRG 322
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 372 (136.0 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 104/346 (30%), Positives = 173/346 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G H++L+ G + S G+ S G+LG P+ I AL N+ +V+CG+ H+
Sbjct: 29 ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
AV G ++ WG LG+ G+ E + +IP+K+ + G++I + CG +H+ A++
Sbjct: 89 AVCHKGRVFAWGAASEGQLGI-GEFKETT-FIPKKIK-TLAGIKIIQVACGHYHSVALSE 145
Query: 421 AGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G++F++G + G LG G S + P+ V +L+ + + G H+ A+ SG
Sbjct: 146 DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----SLSG 200
Query: 480 SNGLSSKKLFTWGDGAEGQLG-HGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTA 536
++ F WG + GQL G+ P R P+ + + ++CG+ T LT
Sbjct: 201 TS-------FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQ 253
Query: 537 TGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
G+VF+ G YGQLG P + + P +E I+ + I CGS H +A + + +V +
Sbjct: 254 DGKVFTFGDNSYGQLGHDPTAEKRGPQLVE-RIEG-LVSQIDCGSDHTLAYIYTTGQVVS 311
Query: 595 WGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS--NF 634
+G+G + H E+ LV A L D QVK + G+ NF
Sbjct: 312 FGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANF 357
Score = 348 (127.6 bits), Expect = 6.8e-28, Sum P(2) = 6.8e-28
Identities = 93/315 (29%), Positives = 156/315 (49%)
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
G+ + A GE H+ + G + + GD ++ G LG+ P ++ +E L ++
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQSCGD--NSRGQLGRKGTPRGEQPERIPA-LETLNVA 78
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVW 465
+ CG H+ A+ G++F +G + G LG G+ + +T +P++++TL +K + +CG +
Sbjct: 79 LVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGIKIIQVACGHY 138
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKV 524
H+ A+ E +G ++F+WG + GQLG G P + P V+ + I +V
Sbjct: 139 HSVALSE--------DG----QVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQV 186
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF----PTRIEGNIKHRYIEDIACGS 580
A G + AL+ +G F GS GQL G+ P I G +K + I+CG
Sbjct: 187 AAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGY 245
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
H AV++ +V+T+G + GQLGH K+ P LVE + + V + CGS+ T A
Sbjct: 246 KHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLAYIY 304
Query: 641 HKGVSIADHSICSGC 655
G + GC
Sbjct: 305 TTG-QVVSFGRGPGC 318
Score = 329 (120.9 bits), Expect = 8.4e-26, Sum P(2) = 8.4e-26
Identities = 86/265 (32%), Positives = 139/265 (52%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
P+ + + L+ ++CG +H++ V +G++F+WG S G+LG G + ++ PK I L
Sbjct: 66 PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
G I VACG +H+ A++ G +++WG H G LG E S P++V +EG+
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTS--VPREVETLKELKTVMAS 461
++ + G H+ A++ +G F +G + G L G+ + P + LK L V S
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDIS 520
CG HTA + + +G K+FT+GD + GQLGH AE R L ++ +S
Sbjct: 243 CGYKHTAVLTQ--------DG----KVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS 290
Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
++ CG T+A + TGQV S G
Sbjct: 291 --QIDCGSDHTLAYIYTTGQVVSFG 313
Score = 308 (113.5 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 67/198 (33%), Positives = 109/198 (55%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYP 339
+ +PK +++ + +ACG H+V +++ GQ+FSWG S G+LG G E + P
Sbjct: 113 KETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASP 172
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSG 398
+ + +L G + VA G H+ A++LSG + WG + L L G + + + P + G
Sbjct: 173 QRVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-G 231
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
++ L + SI CG HTA +T GK+FTFGD ++G LGH + P+ VE ++ L +
Sbjct: 232 ALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQ 291
Query: 459 MASCGVWHTAAIVEVAGK 476
+ CG HT A + G+
Sbjct: 292 I-DCGSDHTLAYIYTTGQ 308
Score = 230 (86.0 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 98/362 (27%), Positives = 152/362 (41%)
Query: 417 AITSAGK---LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
A+ S GK L G A G + ET K + G+ I++V
Sbjct: 78 ALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTLAGI----KIIQV 133
Query: 474 AGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSIT 531
A S LS ++F+WG + GQLG G P + P V+ + I +VA G +
Sbjct: 134 ACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHS 193
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF----PTRIEGNIKHRYIEDIACGSYHIAVVS 587
AL+ +G F GS GQL G+ P I G +K + I+CG H AV++
Sbjct: 194 FALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GALKTLGVVSISCGYKHTAVLT 252
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
+V+T+G + GQLGH K+ P LVE + + V + CGS+ T A G +
Sbjct: 253 QDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERI-EGLVSQIDCGSDHTLAYIYTTG-QVV 310
Query: 648 DHSICSGCXXXXXXXXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKL 707
GC + +C L S+K LA ++ + + +
Sbjct: 311 SFGRGPGCASRSPHPGAESSDISC------LVSAKD-----LA-DVQVKH-IFAGTYANF 357
Query: 708 NTTSESGSNSQIPRNSSGLFQNCKR-VTEK-ENMNSRSATDGQSKPKGKSYHASPS-LNG 764
TTS+ S++ +PR + + +TEK + RS D +K + + +SP+ L
Sbjct: 358 VTTSQDTSSTSVPRKTLPEISRINQSLTEKWMAVAKRSIEDEVAKSEIRVIFSSPACLTA 417
Query: 765 KF 766
F
Sbjct: 418 SF 419
Score = 149 (57.5 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 52/177 (29%), Positives = 81/177 (45%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P + + L SI+CG KH ++T+ G++F++G+ S G+LGH A+ P+L++ +
Sbjct: 227 PVSIGALKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIE 286
Query: 347 GSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + + CG HT A + +G + ++G G G S H P G +
Sbjct: 287 GL-VSQIDCGSDHTLAYIYTTGQVVSFGRGP------GCASRSPH--P--------GAES 329
Query: 406 SSICC-GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
S I C A +F F D SSTSVPR+ TL E+ + S
Sbjct: 330 SDISCLVSAKDLADVQVKHIFAGTYANFVTTSQ-DTSSTSVPRK--TLPEISRINQS 383
Score = 50 (22.7 bits), Expect = 1.5e-30, Sum P(2) = 1.5e-30
Identities = 22/119 (18%), Positives = 42/119 (35%)
Query: 785 PGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIF-EYSK-QTNDNFNQEPDVLRAQ 842
PG SR+P P + S +C ++ D+ + Y+ T V R
Sbjct: 316 PGC--ASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFVTTSQDTSSTSVPRKT 373
Query: 843 LEDLTRKSQFLEVELERTSRKLKETTQIXXXXXXXXXXXXXVIRSLTAQARPGSALGIE 901
L +++R +Q L + +++ E + S + PG + I+
Sbjct: 374 LPEISRINQSLTEKWMAVAKRSIEDEVAKSEIRVIFSSPACLTASFLKKREPGEMISID 432
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 355 (130.0 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 105/354 (29%), Positives = 172/354 (48%)
Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
C + H++++T +G+++SWG G+LGHG + PKLI+ L I ACG HT A
Sbjct: 131 CAA-HSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLA 189
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSA 421
+T +G +YT+G+ + LG LGQ ++ + P + Q G I + CG + +
Sbjct: 190 LTENGTVYTFGE--NKLGQLGQGNQTDAVLSPATI--QYNGQPIVKVACGAEFSMIVDCK 245
Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTA-----AIVEVAG 475
G L++FG +G LGH D + + +E EL + + T + V
Sbjct: 246 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVA 305
Query: 476 K--TSGSNGL----SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--DISFCKVACG 527
+ G+N S K++F+WG G G+LGH + + +VP VK+ D ++ CG
Sbjct: 306 RDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCG 365
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ + AL+ G +F G + S ST +P ++ + I +ACG I V +
Sbjct: 366 YQCSFALSEMGGLFFWGVTNT----SREST-MYPKAVQDLCGWK-IRSLACGKSSIIVAA 419
Query: 588 SKSEVYTWGKGAN-GQLGHGDNENKQTPTL--VEALRDKQVKSVVCGSNFTAAI 638
S + +WG G+LG+GDN+ K + T V+ L + VV G + + I
Sbjct: 420 DDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 198 (74.8 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 54/180 (30%), Positives = 89/180 (49%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN--GSNIHMVAC 355
A+ +ACG+ H +++ Q ++FSWG G G+LGH + D P+L+ + G + C
Sbjct: 305 ARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYC 364
Query: 356 GEFHTCAVTLS--GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
G + C+ LS G L+ WG + N S S P+ V + G +I S+ CG
Sbjct: 365 G--YQCSFALSEMGGLFFWG--VTN------TSRESTMYPKAVQ-DLCGWKIRSLACGK- 412
Query: 414 HTAAITSAGKLFTFGDG-TFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAI 470
+ + + ++G TFG LG+GD S++ +EV+TL + + G H+ I
Sbjct: 413 SSIIVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVI 472
Score = 188 (71.2 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 56/195 (28%), Positives = 91/195 (46%)
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG-- 479
G+L FG + +G + VP++ + L + + + V+V+ SG
Sbjct: 77 GQLLIFGATNWDLIGRKE-----VPKQQAAFRNLGQNLWGPHRYGCLSDVQVSCVVSGPC 131
Query: 480 -SNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
++ L + KL++WG +GQLGHGD + P ++ + ACG + T+ALT
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
G V++ G GQLG T P I+ N + I +ACG+ +V K +Y
Sbjct: 192 ENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYN--GQPIVKVACGAEFSMIVDCKGNLY 249
Query: 594 TWGKGANGQLGHGDN 608
++G GQLGH +
Sbjct: 250 SFGCPEYGQLGHNSD 264
Score = 134 (52.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/113 (31%), Positives = 55/113 (48%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D + PK++E + ACG H + +T+ G ++++GE G+LG G + D
Sbjct: 155 LGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTD 214
Query: 336 -VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
V P I NG I VACG + V G+LY++G G LG S+
Sbjct: 215 AVLSPATIQ-YNGQPIVKVACGAEFSMIVDCKGNLYSFG--CPEYGQLGHNSD 264
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 350 (128.3 bits), Expect = 4.9e-29, P = 4.9e-29
Identities = 96/320 (30%), Positives = 155/320 (48%)
Query: 291 ESTVVLDAQSIACGSK-HAVLVTK-QGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNG 347
E + L Q+ GS + VL T +IF G G LG G +++ + P+ +D+L G
Sbjct: 39 EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIE-PRRLDSLTG 97
Query: 348 SNIHMVACGEF-HTCAVTLSGDLYTWGDGIHNL-GLLGQVSEISHWIPRKVSGQMEGLQI 405
I ++ G H T G+++TWG HN LG + +P +S + Q+
Sbjct: 98 KKIASLSYGSGPHIVLATTDGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGV 464
+ CG +H+ +TS G++F +G G +G G ++ +PR V + K VM +CG
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ 214
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
+ A+V+ +++ WG GQLG G + + P V I +V
Sbjct: 215 MCSMAVVDTG------------EVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRV 262
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHI 583
ACG++ T+ LT GQ+++ G+ YGQLG+ + + +PT + K R IE AC S H
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHT 321
Query: 584 AVVSSKS-EVYTWGKGANGQ 602
+ ++ VY WG+ GQ
Sbjct: 322 SAAKTQGGHVYMWGQ-CRGQ 340
Score = 302 (111.4 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 96/334 (28%), Positives = 161/334 (48%)
Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH----TCAVTLSGD--LYTW-GDG 375
G G+ G V+A +S K++D + + E C +G+ LYT D
Sbjct: 7 GFYGESGKSVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGSAGNEVLYTTVNDE 66
Query: 376 IHNLGL-----LGQVSEISHWI-PRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFG 428
I LG LG V +I I PR++ + G +I+S+ G H T+ G++FT+G
Sbjct: 67 IFVLGTNCSGCLG-VGDIQSTIEPRRLDS-LTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 429 DGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
+ LG+G + VP + T L + + +CG +H+ + S+G +
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT--------SDG----E 172
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVFSMGS 545
+F WG GQ+G G + +P V + + + +ACG ++A+ TG+V+ G
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVM-NIACGQMCSMAVVDTGEVYVWGY 231
Query: 546 ADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GQLG GS+G PT R+ ++ ++ +ACG H V++ + ++Y WG + GQL
Sbjct: 232 NGNGQLGL-GSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQL 289
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G G+ N+ PT V +D+ ++ C S T+A
Sbjct: 290 GTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 295 (108.9 bits), Expect = 7.9e-23, P = 7.9e-23
Identities = 79/221 (35%), Positives = 115/221 (52%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
++F G G LG GD ST PR +++L K S G + + +A T G
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYG---SGPHIVLA-TTDG--- 118
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
++FTWG A QLG+G +VP C +S ++S +VACG ++ LT+ G+
Sbjct: 119 ----EVFTWGHNAYSQLGNGTTNHGLVP-C-HISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
VF+ G + GQ+GS GST P R+ G ++++ + +IACG V EVY WG
Sbjct: 173 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY 231
Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
NGQLG G + N+ TP V AL+ +V+ V CG T +
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 176 (67.0 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
L++ VV++ IACG ++ V G+++ WG G+LG G + P + AL G
Sbjct: 202 LQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR 258
Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
+ VACG HT +T G +Y WG ++ G LG ++ + P V + + + I
Sbjct: 259 VQRVACGYAHTLVLTDEGQIYAWG--ANSYGQLGTGNKSNQSYPTPVVVEKDRI-IEIAA 315
Query: 410 CGPWHT-AAITSAGKLFTFG 428
C HT AA T G ++ +G
Sbjct: 316 CHSAHTSAAKTQGGHVYMWG 335
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 368 (134.6 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 100/337 (29%), Positives = 167/337 (49%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+CG H+ VT+QG++F +G+ + G+LG ++ V+ P + L G VACG HT
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98
Query: 361 CAVTLSGD-LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T G+ L G+ LGL G ++ + +++ + I + G +AA+T
Sbjct: 99 LVSTSQGEILAAGGNSDGQLGL-GHCNDSISF--QRLRPFCDYAPIKLLSAGDHTSAALT 155
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+LF +GD + G LG G+ S +P+E+ + + V SCG H+A + + SG
Sbjct: 156 EDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWV--SCGYRHSALVTD-----SG 208
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG- 538
++++G+ A+G+LG + +V S +VACG T+ALT
Sbjct: 209 D-------VYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTEDEL 261
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
F G LG+ P + G+ + + + CG H A+++ +YT+G G
Sbjct: 262 YCFGGGEFGQLGLGTLVFVADSPVAV-GHFRKGRVTHVTCGEQHSALITDSGLLYTFGDG 320
Query: 599 ANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCGSN 633
+G+LGHGD N+ TPT+ + + V +V CGS+
Sbjct: 321 RHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGSS 357
Score = 273 (101.2 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 87/292 (29%), Positives = 139/292 (47%)
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCG 411
++CG+ H+ VT G L+ +GD +N G LG +I + + V + ++G + S+ CG
Sbjct: 39 ISCGQSHSAFVTEQGRLFVFGD--NNRGQLGL--QIKGPVTKPVCVKVLKGERAQSVACG 94
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAI 470
HT TS G++ G + G LG G S S R + S G +AA+
Sbjct: 95 TDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAAL 154
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
E +G +LF WGD + GQLG G+ ++P + + I + V+CG+
Sbjct: 155 TE--------DG----RLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHW--VSCGYRH 200
Query: 531 TIALTATGQVFSMGSADYGQLGSPG---STGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ +T +G V+S G + G+LG + +P R+E H ++ +ACG H ++
Sbjct: 201 SALVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVES--LHSVLQ-VACGGKHTLALT 257
Query: 588 SKSEVYTWGKGANGQLGHGDNEN-KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ E+Y +G G GQLG G +P V R +V V CG +A I
Sbjct: 258 -EDELYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKGRVTHVTCGEQHSALI 308
Score = 264 (98.0 bits), Expect = 1.6e-16, Sum P(3) = 1.6e-16
Identities = 86/299 (28%), Positives = 145/299 (48%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACG 356
AQS+ACG+ H ++ T QG+I + G S G+LG G D +S+ +L + + I +++ G
Sbjct: 88 AQSVACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAG 147
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
+ + A+T G L+ WGD ++ G LG ++ +P++++ G I + CG H+A
Sbjct: 148 DHTSAALTEDGRLFLWGD--NSAGQLGFGNDSHALLPKELN---MGQSIHWVSCGYRHSA 202
Query: 417 AITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVE-- 472
+T +G +++FG+ G LG ++ S P+ VE+L + V +CG HT A+ E
Sbjct: 203 LVTDSGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQV--ACGGKHTLALTEDE 260
Query: 473 ---VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
G G GL + A G G RV V CG
Sbjct: 261 LYCFGGGEFGQLGLGTLVFVADSPVAVGHFRKG----RVT-------------HVTCGEQ 303
Query: 530 ITIALTATGQVFSMGSADYGQLG--SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAV 585
+ +T +G +++ G +G+LG T +F PT + ++ + +ACGS H+ V
Sbjct: 304 HSALITDSGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYS-VMTVACGSSHMLV 361
Score = 174 (66.3 bits), Expect = 4.9e-07, Sum P(3) = 4.9e-07
Identities = 61/222 (27%), Positives = 94/222 (42%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
I G +FTFG + + +VP + LK V SCG H+A + E
Sbjct: 7 IPDTGAVFTFGKS---------KIANNVPSRL-WLKSDIPVHISCGQSHSAFVTE----- 51
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
G +LF +GD GQLG P P+CVKV VACG T+ T+
Sbjct: 52 ---QG----RLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHTLVSTSQ 104
Query: 538 GQVFSMGSADYGQLGSPGSTGKFP-TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
G++ + G GQLG R+ + I+ ++ G + A ++ ++ WG
Sbjct: 105 GEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTSAALTEDGRLFLWG 164
Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ GQLG G++ + P E + + V CG +A +
Sbjct: 165 DNSAGQLGFGNDSHALLPK--ELNMGQSIHWVSCGYRHSALV 204
Score = 46 (21.3 bits), Expect = 5.9e-29, Sum P(2) = 5.9e-29
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 710 TSESGSNSQIP-RNSSGLFQNCK-RVTEKENMNSRSATDGQSKPK 752
T + + +P R +G + K R K+N+ R TDG P+
Sbjct: 1641 TKQKAKPNVLPARRQTGQTETQKTRPRGKQNVKIRKQTDGAQDPQ 1685
Score = 43 (20.2 bits), Expect = 8.0e-28, Sum P(3) = 8.0e-28
Identities = 26/110 (23%), Positives = 46/110 (41%)
Query: 710 TSESGSNSQIPRNSSGL-FQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQW 768
T + +NS P++S F K + + S+SA+ QS K + +L +
Sbjct: 836 TEKGETNSNSPQSSENRSFPTIKS-KKSDAEKSQSASTLQSDQKNSQSSTNKALAEQKHK 894
Query: 769 EPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANS 818
P+ IKS S S S S ++ S+P + + F+ ++S
Sbjct: 895 FPS---IKSLAPERSHSVSNLWSNNQSATNKSSAPKAAESGKLFSSTSSS 941
Score = 40 (19.1 bits), Expect = 8.0e-28, Sum P(3) = 8.0e-28
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 844 EDLTRKSQFLEVELERTSRKLKETTQ 869
E+ +S+ E E E+ S K +ET++
Sbjct: 1432 EEQAEESEEEEEETEQNSGKTRETSE 1457
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 357 (130.7 bits), Expect = 6.1e-29, P = 6.1e-29
Identities = 103/367 (28%), Positives = 178/367 (48%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVA 354
++ + A G +H++L+ GQ+ S G+ G+LG G + I AL ++ +V+
Sbjct: 23 VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDLVS 82
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
CG+ H+ AV G ++ WG G LG G+ E ++ IP K+ + ++I + CG +
Sbjct: 83 CGKEHSLAVCHKGRVFAWGAGSEGQLGT-GEFKE-TNLIPMKIK-TLNDIKIKQVSCGHY 139
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H+ A++ G++F++G + G LG G + S + P+ V +L + + G H+ A+
Sbjct: 140 HSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL-- 197
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGD--AEPRVVPLCVKVSDDISFCKVACGHS 529
SG++ F WG GQL H + + P + ++ ++CG+
Sbjct: 198 ---SLSGTS-------FGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYE 247
Query: 530 ITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVS 587
T+ LT G+VF+ G YGQLG SP + P +EG + I CGSYH +A V
Sbjct: 248 HTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI--DGLVSQIDCGSYHTLAYVY 305
Query: 588 SKSEVYTWGKGANGQLG--HGD--NENKQTPTLVEA--LRDKQVKSVVCGSNFTAAICLH 641
+ +V ++G+ + H + EN L+ A L D QVK + G+ + + +
Sbjct: 306 TTGKVVSFGREPTCKSSPTHPEALTENVDFTCLISADDLVDFQVKHIFAGT-YANFVTTY 364
Query: 642 KGVSIAD 648
+ S D
Sbjct: 365 QNTSSTD 371
Score = 348 (127.6 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 102/334 (30%), Positives = 161/334 (48%)
Query: 329 GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV-SE 387
G G VS ++ L G + A GE H+ + +G +++ GD + G LGQ +
Sbjct: 6 GPGPRGPVSRRRV--GLGGVELRQAASGERHSLLLLSNGQVHSCGD--NGRGQLGQRGAP 61
Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS-VP 446
S + ++ +E L + + CG H+ A+ G++F +G G+ G LG G+ T+ +P
Sbjct: 62 CSAQLKERIRA-LETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIP 120
Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
+++TL ++K SCG +H+ A+ E G ++F+WG ++GQLG G P
Sbjct: 121 MKIKTLNDIKIKQVSCGHYHSLALSE--------GG----QVFSWGSNSDGQLGLGKKFP 168
Query: 507 -RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS-----PGSTGKF 560
+ P V+ D I +VA G + + AL+ +G F G + GQL G + K
Sbjct: 169 SQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYK- 227
Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
P I +K+ + I+CG H V++ +V+T+G GQLGH K P LVE +
Sbjct: 228 PYSISA-LKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGI 286
Query: 621 RDKQVKSVVCGSNFTAAICLHKG--VSIADHSIC 652
D V + CGS T A G VS C
Sbjct: 287 -DGLVSQIDCGSYHTLAYVYTTGKVVSFGREPTC 319
Score = 305 (112.4 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 80/267 (29%), Positives = 134/267 (50%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLI 342
A L + + + L ++CG +H++ V +G++F+WG GS G+LG G + + P I
Sbjct: 64 AQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKI 123
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQME 401
LN I V+CG +H+ A++ G +++WG ++ G LG + S P++V ++
Sbjct: 124 KTLNDIKIKQVSCGHYHSLALSEGGQVFSWGS--NSDGQLGLGKKFPSQASPQRVRS-LD 180
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSS--TSVPREVETLKELKTV 458
G+ ++ + G H+ A++ +G F +G G L H + S + P + LK L +
Sbjct: 181 GIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVI 240
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
SCG HT + + NG K+FT+GD GQLGH + P V+ D
Sbjct: 241 YISCGYEHTVVLTQ--------NG----KVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDG 288
Query: 519 ISFCKVACGHSITIALT-ATGQVFSMG 544
+ ++ CG T+A TG+V S G
Sbjct: 289 L-VSQIDCGSYHTLAYVYTTGKVVSFG 314
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 349 (127.9 bits), Expect = 6.3e-29, P = 6.3e-29
Identities = 98/320 (30%), Positives = 155/320 (48%)
Query: 291 ESTVVLDAQSIACGSK-HAVLVTK-QGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNG 347
E + L Q+ GS + VL T +IF G G LG G V++ + P+ +D+LNG
Sbjct: 39 EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIE-PRRLDSLNG 97
Query: 348 SNIHMVACGEF-HTCAVTLSGDLYTWGDGIHNL-GLLGQVSEISHWIPRKVSGQMEGLQI 405
I ++ G H T G+++TWG HN LG + +P +S + Q+
Sbjct: 98 KKIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQV 154
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGV 464
+ CG +H+ +TS G++F +G G +G G + +PR V + K V+ +CG
Sbjct: 155 IEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ 214
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
A+V+ +++ WG GQLG G++ + P V I +V
Sbjct: 215 MCCMAVVDTG------------EVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRV 262
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHI 583
ACG++ T+ LT GQV++ G+ YGQLG+ + + +PT + K R IE AC S H
Sbjct: 263 ACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHT 321
Query: 584 AVVSSKS-EVYTWGKGANGQ 602
+ ++ VY WG+ GQ
Sbjct: 322 SAAKTQGGHVYMWGQ-CRGQ 340
Score = 293 (108.2 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 79/221 (35%), Positives = 115/221 (52%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
++F G G LG GD ST PR +++L K S G + + +A T G
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYG---SGPHIVLA-TTEG--- 118
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
++FTWG A QLG+G +VP C +S ++S +VACG ++ LT+ G+
Sbjct: 119 ----EVFTWGHNAYSQLGNGTTNHGLVP-C-HISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
VF+ G + GQ+GS GST P R+ G ++++ + IACG V EVY WG
Sbjct: 173 VFAWGYNNSGQVGS-GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGY 231
Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
NGQLG G++ N+ TP V AL+ +V+ V CG T +
Sbjct: 232 NGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 288 (106.4 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 78/281 (27%), Positives = 140/281 (49%)
Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPW-HTAAITSA 421
T++ +++ G G LG + ++ I PR++ + G +I+ + G H T+
Sbjct: 62 TVNDEIFVLGTNC--CGCLG-LGDVQSTIEPRRLDS-LNGKKIACLSYGSGPHIVLATTE 117
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGS 480
G++FT+G + LG+G + VP + T L + + +CG +H+ + S
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT--------S 169
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATG 538
+G ++F WG GQ+G G + +P V + + + +ACG +A+ TG
Sbjct: 170 DG----EVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKV-VVTIACGQMCCMAVVDTG 224
Query: 539 QVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
+V+ G GQLG G++G PT R+ ++ ++ +ACG H V++ + +VY WG
Sbjct: 225 EVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWG 282
Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
+ GQLG G+ N+ PT V +D+ ++ C S T+A
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 361 (132.1 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 103/341 (30%), Positives = 166/341 (48%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+CG +H +VT G+++ +G G+LG G + V P + AL + CG HT
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 101
Query: 361 CAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T G++Y G LGL G E + + +S +I + G + +AA+T
Sbjct: 102 LVYTEKGNVYAAGGNSEGQLGL-GDTEERTTF--HLISFFTNQHKIKQLAAGSYTSAAVT 158
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+LF +GD + G +G D++ SVP +V+ K + ++ SCG +H+A I
Sbjct: 159 EDGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFIT-------- 208
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+G +L+T+G+ G+LG + RV + + + ++ KVACG T+ LT
Sbjct: 209 GDG----ELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVN--KVACGGEHTVVLTE 262
Query: 537 TGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE--V 592
TG V++ G YGQLG K P ++ H+ I ++ CG H AV++ +
Sbjct: 263 TG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHK-IHNVTCGESHTAVIADTENGLM 320
Query: 593 YTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
+T+G G +G+LG G+ N+ P L V V CG
Sbjct: 321 FTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361
Score = 329 (120.9 bits), Expect = 3.5e-25, Sum P(2) = 3.5e-25
Identities = 89/244 (36%), Positives = 134/244 (54%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ +A GS + VT+ GQ+F WG+ S G++G + VS P +D G + ++CG +
Sbjct: 145 KQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYY 202
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ +T G+LYT+G+ + LGLL + + S +P+ V G ME +++ + CG HT
Sbjct: 203 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVLGIME--KVNKVACGGEHTVV 259
Query: 418 ITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
+T G ++TFG G +G LGHG TSVP+ V+ L+ K +CG HTA I +
Sbjct: 260 LTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADT--- 315
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVP-LCVKVSDDISFCK--VACG--HS 529
NGL +FT+GDG G+LG G+ + P LC S+ +SF VACG H
Sbjct: 316 ---ENGL----MFTFGDGRHGKLGLGEENFANQFDPALC---SNFLSFTVLLVACGGCHM 365
Query: 530 ITIA 533
+ A
Sbjct: 366 LVFA 369
Score = 302 (111.4 bits), Expect = 3.6e-22, Sum P(2) = 3.6e-22
Identities = 90/298 (30%), Positives = 145/298 (48%)
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
N +H ++CG+ HT VT +G LY +G ++ G LG S+ + P V ++ +
Sbjct: 36 NDKPVH-ISCGDEHTAVVTGNGKLYMFGS--NDWGQLGLGSKNTVRKPTCVKA-LKPEKT 91
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL-KELKTVMASCGV 464
CG HT T G ++ G + G LG GD + + + K + G
Sbjct: 92 KLAVCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGS 151
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
+ +AA+ E +G +LF WGD +EGQ+G D VP V V +S +
Sbjct: 152 YTSAAVTE--------DG----QLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVS--SI 197
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGS-PGS--TGKFPTRIEGNIKHRYIEDIACGSY 581
+CG+ + +T G++++ G + G+LG P + P + G ++ + +ACG
Sbjct: 198 SCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEK--VNKVACGGE 255
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
H VV +++ VYT+G G GQLGHG K + P V+ LR ++ +V CG + TA I
Sbjct: 256 H-TVVLTETGVYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 312
Score = 298 (110.0 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 89/294 (30%), Positives = 138/294 (46%)
Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTC 361
CG H ++ T++G +++ G S G+LG G E ++ + N I +A G + +
Sbjct: 96 CGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSA 155
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
AVT G L+ WGD ++ G +G + +P +V G +SSI CG +H+A IT
Sbjct: 156 AVTEDGQLFVWGD--NSEGQIGLADKTCVSVPCQVD---VGKPVSSISCGYYHSAFITGD 210
Query: 422 GKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+TFG+ G LG ++ VP+ V + E K +CG HT + E
Sbjct: 211 GELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIME-KVNKVACGGEHTVVLTETG----- 264
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACG--HSITIALTA 536
++T+G G GQLGHG + VP VK V CG H+ IA T
Sbjct: 265 --------VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIADTE 316
Query: 537 TGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
G +F+ G +G+LG +F + N + +ACG H+ V ++
Sbjct: 317 NGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCHMLVFAT 370
Score = 200 (75.5 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 67/223 (30%), Positives = 93/223 (41%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
+ +G +FTFG F + ++P + K K V SCG HTA +
Sbjct: 10 VPESGAVFTFGKSNF---------AENIPSKF-WFKNDKPVHISCGDEHTAVVT------ 53
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
NG KL+ +G GQLG G P CVK CG + T+ T
Sbjct: 54 --GNG----KLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHTLVYTEK 107
Query: 538 GQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G V++ G GQLG G T + T I I+ +A GSY A V+ +++ W
Sbjct: 108 GNVYAAGGNSEGQLGL-GDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVW 166
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G + GQ+G D P V+ K V S+ CG +A I
Sbjct: 167 GDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYYHSAFI 207
Score = 150 (57.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 55/215 (25%), Positives = 92/215 (42%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
++CG T +T G+++ GS D+GQLG +T + PT ++ +K + CG H
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKA-LKPEKTKLAVCGRNH 100
Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK-QVKSVVCGSNFTAAICLH 641
V + K VY G + GQLG GD E + T L+ ++ ++K + GS +AA+
Sbjct: 101 TLVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTED 160
Query: 642 KGVSI-ADHSICSGCXXXXXXXXXXHNCY-NCGLVYCKL-CSSKKSMKTALAPEINKPYR 698
+ + D+S G C + G + C S A + Y
Sbjct: 161 GQLFVWGDNS--EGQIGLADKTCVSVPCQVDVGKPVSSISCGYYHS---AFITGDGELYT 215
Query: 699 VCDDCFIKLNTTSESGSNSQIPRNSSGLFQNCKRV 733
+ KL E NS++P+ G+ + +V
Sbjct: 216 FGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKV 250
Score = 38 (18.4 bits), Expect = 8.9e-29, Sum P(2) = 8.9e-29
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 784 PPGSRRVSRAPSPISRKSSPACSITMN 810
PP R ++ P + + P C T N
Sbjct: 433 PPLGERFLKSSLPEASNTGPICFSTTN 459
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 330 (121.2 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 89/326 (27%), Positives = 151/326 (46%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
+ +WG G G+LG G + + ++DAL N+ V G ++ A+ G L+TWG
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG--W 64
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
+ G LG E + + ++I G WH A+ G+ + +G +G G
Sbjct: 65 NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
+ S R V +++ + C T V AG T ++TWG
Sbjct: 125 E-EPSKDETGRPVR--RDI-VIPKRCAQQLTVRQV-AAGGTHSVVLTREGYVWTWGQ--- 176
Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
GD + VP+ V+ +++ V H++ AL G +++ G+ +YGQLG+ G
Sbjct: 177 -PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNL--ALKEDGTLWAWGNNEYGQLGT-GD 232
Query: 557 TG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQ 612
T +P ++G + + DIA G +H ++++ EVY WG+G +G+LG GDN+ +K
Sbjct: 233 TQPRSYPIPVQG-LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKM 291
Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
P V L + + V CG + A+
Sbjct: 292 LPQKVNLLAGEDIIQVSCGGTHSVAL 317
Score = 295 (108.9 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 89/331 (26%), Positives = 149/331 (45%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDA 344
L V+++ + +S+ GS++++ + G++F+WG G LGH E S P L+ +
Sbjct: 28 LASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKS 87
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L I A G +H AV G Y WG + G G+ R V +
Sbjct: 88 LANVKIVQAAIGGWHCLAVDDQGRAYAWGG--NEYGQCGEEPSKDE-TGRPVR---RDIV 141
Query: 405 ISSICCGPWHTAAITSAG--KLFTFGDGTFGALGH----GDRSSTSVPREVETLKELKTV 458
I C + + G + +G G GD SVP V+ L+ ++ +
Sbjct: 142 IPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGLENVRLI 201
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
+ G +H A+ K G+ L+ WG+ GQLG GD +PR P+ V+ DD
Sbjct: 202 --AVGAFHNLAL-----KEDGT-------LWAWGNNEYGQLGTGDTQPRSYPIPVQGLDD 247
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI-- 576
++ +A G + ALT G+V+ G ++G+LG G K + + EDI
Sbjct: 248 LTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF-GDNDKSSKMLPQKVNLLAGEDIIQ 306
Query: 577 -ACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
+CG H ++ ++++G+G +G+LG+G
Sbjct: 307 VSCGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 241 (89.9 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 52/150 (34%), Positives = 84/150 (56%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
IA G+ H + + + G +++WG G+LG G SYP + L+ + +A G +H+
Sbjct: 201 IAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHS 260
Query: 361 CAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
A+T G++Y WG G H LG G + S +P+KV+ + G I + CG H+ A+T
Sbjct: 261 TALTNEGEVYGWGRGEHGRLGF-GDNDKSSKMLPQKVN-LLAGEDIIQVSCGGTHSVALT 318
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
G++F+FG G G LG+G + +T P E+
Sbjct: 319 RDGRIFSFGRGDHGRLGYGRKVTTGQPLEL 348
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ + D + P ++ L IA G H+ +T +G+++ WG G G+LG G + D
Sbjct: 228 LGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFG-DND 286
Query: 336 VS---YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL-----LGQVS 386
S P+ ++ L G +I V+CG H+ A+T G ++++G G H LG GQ
Sbjct: 287 KSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPL 346
Query: 387 EISHWIP------RKVSGQMEGLQISS-ICCGPWHTAAI 418
E+ IP + +G I+ + CG HT AI
Sbjct: 347 ELPIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAI 385
Score = 151 (58.2 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 59/230 (25%), Positives = 98/230 (42%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
+ SA + +G G G LG G + KEL +V+ + ++ ++V G
Sbjct: 1 MASATSVIAWGSGEDGQLGLG----------TDEEKELASVVDALEPFNVRSVV--GGSR 48
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+ KLFTWG G LGH + + P VK ++ + A G +A+
Sbjct: 49 NSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDD 108
Query: 537 TGQVFSMGSADYGQLG---SPGSTGKFPTRIEGNIKHRY-----IEDIACGSYHIAVVSS 588
G+ ++ G +YGQ G S TG+ P R + I R + +A G H V++
Sbjct: 109 QGRAYAWGGNEYGQCGEEPSKDETGR-PVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTR 167
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ V+TWG+ GD + P V+ L + V+ + G+ A+
Sbjct: 168 EGYVWTWGQ----PWPPGDIKQISVPVRVQGLEN--VRLIAVGAFHNLAL 211
Score = 59 (25.8 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 19/82 (23%), Positives = 36/82 (43%)
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG----DNENKQTPTLVEALR------D 622
I ++CG H ++ ++++G+G +G+LG+G + + P + D
Sbjct: 304 IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTD 363
Query: 623 KQ------VKSVVCGSNFTAAI 638
++ K V CG T AI
Sbjct: 364 EEDDGKWIAKHVACGGRHTLAI 385
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 329 (120.9 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 90/327 (27%), Positives = 155/327 (47%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
I +WG G G+LG G + + +++AL ++ V G ++ A+ G ++TWG
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG--W 64
Query: 377 HNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
+ G LG E + IP +V + ++I+ G WH A+ G+ + +G +G
Sbjct: 65 NQRGTLGHQPETKTENIPSRVKA-LANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQC 123
Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
G + + R V +++ + C T V AG T ++TWG
Sbjct: 124 GE-EPLKDEMGRPVR--RDI-VIPKRCAPKLTVRQV-AAGGTHSVVLTREGHVWTWGQ-- 176
Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
GD + VP+ V+ +++ V H++ AL G++ + G+ +YGQLG+ G
Sbjct: 177 --PWPPGDIKQISVPVRVQGLENVRLIAVGAFHNL--ALEEDGRLLAWGNNEYGQLGT-G 231
Query: 556 STG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NK 611
T P ++G + + DIA G +H ++ K EVY WG+G +G+LG GDN+ +K
Sbjct: 232 DTQPTSHPVPVQG-LDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSK 290
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P V L ++ + V CG + A+
Sbjct: 291 MVPQKVNLLAEEDIIQVSCGGTHSVAL 317
Score = 317 (116.6 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 97/334 (29%), Positives = 158/334 (47%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK---------LGHGVEADV 336
+P +++ + A G H + V QG+ ++WG G+ +G V D+
Sbjct: 81 IPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
PK + VA G H+ +T G ++TWG G + +IS +P +V
Sbjct: 141 VIPKR--CAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPP----GDIKQIS--VPVRV 192
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
G +E +++ I G +H A+ G+L +G+ +G LG GD TS P V+ L +L
Sbjct: 193 QG-LENVRL--IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT 249
Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVK 514
V + G WH+ A+ + G+ G WG G G+LG GD + ++VP V
Sbjct: 250 LVDIAAGGWHSTALTD-KGEVYG-----------WGRGEHGRLGLGDNDKSSKMVPQKVN 297
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-----SPGSTGKFPTRI---EG 566
+ + +V+CG + ++ALT G++FS G D+G+LG + G + P +I EG
Sbjct: 298 LLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEG 357
Query: 567 NIKHRYIED--------IACGSYH-IAVVSSKSE 591
+ H E+ IACG H +A+V KS+
Sbjct: 358 SFNHTDEEEEGKWSAKSIACGGRHTLAIVEWKSD 391
Score = 288 (106.4 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 89/329 (27%), Positives = 148/329 (44%)
Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNG 347
V+E+ +S+ GS++++ + G +F+WG G LGH E + P + AL
Sbjct: 31 VVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALAN 90
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
I A G +H AV G Y WG + G G+ + + R V + +
Sbjct: 91 VKITQAAIGGWHCLAVDDQGRAYAWGG--NEYGQCGE-EPLKDEMGRPVRRDI----VIP 143
Query: 408 ICCGPWHTAAITSAG---KLFTFGDGTFGALGH----GDRSSTSVPREVETLKELKTVMA 460
C P T +AG + +G G GD SVP V+ L+ ++ +
Sbjct: 144 KRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLI-- 201
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
+ G +H A+ E +G +L WG+ GQLG GD +P P+ V+ DD++
Sbjct: 202 AVGAFHNLALEE--------DG----RLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLT 249
Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI---A 577
+A G + ALT G+V+ G ++G+LG G K + + EDI +
Sbjct: 250 LVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGL-GDNDKSSKMVPQKVNLLAEEDIIQVS 308
Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
CG H ++ ++++G+G +G+LG+G
Sbjct: 309 CGGTHSVALTRDGRIFSFGRGDHGRLGYG 337
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 48/159 (30%), Positives = 74/159 (46%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ + D + P ++ L IA G H+ +T +G+++ WG G G+LG G + D
Sbjct: 228 LGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGLG-DND 286
Query: 336 VS---YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL-----LGQVS 386
S P+ ++ L +I V+CG H+ A+T G ++++G G H LG GQ
Sbjct: 287 KSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPL 346
Query: 387 EISHWIP------RKVSGQMEGL-QISSICCGPWHTAAI 418
E+ IP + EG SI CG HT AI
Sbjct: 347 ELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAI 385
Score = 142 (55.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 37/126 (29%), Positives = 57/126 (45%)
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
+++ + WG G +GQLG G E + V+ + S V G ++A+ G +F+
Sbjct: 2 VTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFT 61
Query: 543 MGSADYGQLG-SPGS-TGKFPTRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
G G LG P + T P+R++ N+K I A G +H V + Y WG
Sbjct: 62 WGWNQRGTLGHQPETKTENIPSRVKALANVK---ITQAAIGGWHCLAVDDQGRAYAWGGN 118
Query: 599 ANGQLG 604
GQ G
Sbjct: 119 EYGQCG 124
Score = 119 (46.9 bits), Expect = 0.00084, P = 0.00084
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
+ + WG G +GQLG G NE K+ +VEAL V+SVV GS + AIC
Sbjct: 5 TSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAIC 54
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 337 (123.7 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 97/333 (29%), Positives = 165/333 (49%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
+C + H++L+T +G+++SWG G+LGHG V P+LI+AL+ I + ACG HT
Sbjct: 155 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTL 213
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
A+T +G ++ +G+ + +G LG ++ +P G I+ + CG + +
Sbjct: 214 ALTDTGSVFAFGE--NKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMLMDCK 270
Query: 422 GKLFTFGDGTFGALGHGD------RSSTS------VPREVETLKELKTVMASCGVWHTAA 469
G L++FG +G LGH R+ VPR V E KT
Sbjct: 271 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIE-KTKDGQILPVPNVV 329
Query: 470 IVEVAGKTSGSNGLSS-KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--DISFCKVAC 526
+ +VA + + L S K++F+WG G G+LGH + + +VP VK+ D ++
Sbjct: 330 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYA 389
Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
G++ + A++ G +F G+ + S ST +P ++ R I +ACG I V
Sbjct: 390 GYTCSFAVSEVGGLFFWGATNT----SREST-MYPKAVQDLCGWR-IRSLACGKSSIIVA 443
Query: 587 SSKSEVYTWGKGAN-GQLGHGDNENKQTPTLVE 618
+ +S + +WG G+LG+GD++ K + E
Sbjct: 444 ADESTI-SWGPSPTFGELGYGDHKPKSSTAAQE 475
Score = 189 (71.6 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 58/194 (29%), Positives = 97/194 (50%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
+LP + + VV D +ACG+ H +++ Q ++FSWG G G+LGH + D P+L+
Sbjct: 322 ILP--VPNVVVRD---VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 376
Query: 345 LN--GSNIHMVACGEFHTCAVTLS--GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
+ G + G +TC+ +S G L+ WG S S P+ V +
Sbjct: 377 FDFPGRGATQIYAG--YTCSFAVSEVGGLFFWG--------ATNTSRESTMYPKAVQ-DL 425
Query: 401 EGLQISSICCGPWHTAAITSAGK-LFTFGDG-TFGALGHGDRS--STSVPREVETLKELK 456
G +I S+ CG ++ I +A + ++G TFG LG+GD S++ +EV+TL +
Sbjct: 426 CGWRIRSLACGK--SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIF 483
Query: 457 TVMASCGVWHTAAI 470
+ + G H+ I
Sbjct: 484 SEQVAMGYSHSLVI 497
Score = 177 (67.4 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 77/314 (24%), Positives = 128/314 (40%)
Query: 339 PKLIDALNGSNIHMVACGEF--HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
P L+G + V G H+ +T G L++WG + G LG PR +
Sbjct: 137 PHRYGCLSGVRVRTVVSGSCAAHSLLITTEGKLWSWGR--NEKGQLGHGDTKRVEAPRLI 194
Query: 397 SG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
E + +++ CG HT A+T G +F FG+ G LG G+++ +VP + +
Sbjct: 195 EALSHEAIVLAA--CGRNHTLALTDTGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNG 251
Query: 456 KTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG---AEGQLGHGDAE--PRVV 509
+ + +CG + +++ G +L DG A Q D E PR V
Sbjct: 252 QPITKMACGA-EFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRV 310
Query: 510 PLCVKVSDD--------ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
+ ++ + D + VACG + T+ L + +VFS G YG+LG +
Sbjct: 311 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV 370
Query: 562 TRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
R+ + R I G VS ++ WG N E+ P V+
Sbjct: 371 PRLVKLFDFPGRGATQIYAGYTCSFAVSEVGGLFFWG-ATNTS-----RESTMYPKAVQD 424
Query: 620 LRDKQVKSVVCGSN 633
L +++S+ CG +
Sbjct: 425 LCGWRIRSLACGKS 438
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 22/71 (30%), Positives = 43/71 (60%)
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
++ R + +C + H +++++ ++++WG+ GQLGHGD + + P L+EAL + +
Sbjct: 146 VRVRTVVSGSCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVL 204
Query: 628 VVCGSNFTAAI 638
CG N T A+
Sbjct: 205 AACGRNHTLAL 215
Score = 128 (50.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 36/115 (31%), Positives = 58/115 (50%)
Query: 525 ACG-HSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSY 581
+C HS+ I T G+++S G + GQLG G T + P IE + H I ACG
Sbjct: 155 SCAAHSLLI--TTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEA-LSHEAIVLAACGRN 210
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ-VKSVVCGSNFT 635
H ++ V+ +G+ GQLG G N+ P+ + + + Q + + CG+ F+
Sbjct: 211 HTLALTDTGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEFS 264
Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 625 VKSVVCGSNFTAAICLHKGV 644
V+ V CG+N T + K V
Sbjct: 330 VRDVACGANHTLVLDSQKRV 349
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 355 (130.0 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 107/355 (30%), Positives = 177/355 (49%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
++CG +H+ +VT +++ +G + G+LG G ++ +S P + AL + + ACG HT
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T G++Y T G+ LGL G E + + +S +I + G +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGL-GDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+LF +GD + G +G + S+ VP++V K + + SCG +H+A + T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+L+ +G+ G+LG + R L ++ + + +VACG T+ LT
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260
Query: 537 TGQVFSMGSADYGQLGSPG---STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
V++ G +GQLG T + P IE NI+ + I I+CG H A+++ +Y
Sbjct: 261 NA-VYTFGLGQFGQLGLGTFLFETSE-PKVIE-NIRDQTISYISCGENHTALITDIGLMY 317
Query: 594 TWGKGANGQLGHG-DN-ENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
T+G G +G+LG G +N N PTL VK V CG + H+GV+
Sbjct: 318 TFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372
Score = 266 (98.7 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 78/249 (31%), Positives = 127/249 (51%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ ++ GS + +T+ G++F WG+ S G++G ++V P+ + G + ++CG +
Sbjct: 143 KQLSAGSNTSAALTEDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTI--GKPVSWISCGYY 200
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ VT G+LY +G+ + LGL Q+ +H P+ VS E ++ + CG HT
Sbjct: 201 HSAFVTTDGELYVFGEPENGKLGLPNQLLG-NHRTPQLVSEIPE--KVIQVACGGEHTVV 257
Query: 418 ITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
+T ++TFG G FG LG G TS P+ +E +++ SCG HTA I ++
Sbjct: 258 LTE-NAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRDQTISYISCGENHTALITDI--- 313
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHG--DAEPRVVP-LCVKVSDDISFCK--VACG--HS 529
GL ++T+GDG G+LG G + +P LC S+ + F VACG H
Sbjct: 314 -----GL----MYTFGDGRHGKLGLGLENFTNHFIPTLC---SNFLRFIVKLVACGGCHM 361
Query: 530 ITIALTATG 538
+ A G
Sbjct: 362 VVFAAPHRG 370
Score = 41 (19.5 bits), Expect = 1.0e-27, Sum P(2) = 1.0e-27
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 735 EKENMNSRSATDGQSKPKGKSYHASPSLNGKF----QWEPNSDFIKSNKI 780
EK N+ R+ + PKG + S + + + P+ D K+ KI
Sbjct: 904 EKANLEERAICEYNENPKGYMLDDADSSSLEILENSETTPSKDMKKTKKI 953
Score = 37 (18.1 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 737 ENMNSRSAT--DGQSKPKGKSYHA 758
EN+ S+ T D +S P G YH+
Sbjct: 862 ENVESKKKTVGDDESVPTG--YHS 883
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 331 (121.6 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 90/323 (27%), Positives = 145/323 (44%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFH 359
++ H+ V + GQ+ + G+ S GH + PKL++AL G+ VA G
Sbjct: 168 VSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHF 227
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T ++ G YT G H G LG + +P+ V + I GP + A+T
Sbjct: 228 TVFLSREGHAYTCGSNTH--GQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVT 285
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKT 477
G +++FG G+ LGHG++ PR ++ K + + S G H A+
Sbjct: 286 QDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL------- 338
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKVACGHSITIALTA 536
SNG +++TWG G G LGHGD ++ P + V +++ ++ +V T L
Sbjct: 339 -DSNG----RVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAV-QVCARKRKTFVLVE 392
Query: 537 TGQVFSMGSADYGQLGSP--GSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
G ++ G +G LG P G + K P +E HR + ++ G YH VV+ + +
Sbjct: 393 GGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKPHR-VSQVSTGLYHTIVVTQRGRI 451
Query: 593 YTWGKGANGQLGHGDNENKQTPT 615
+ +G QLGH PT
Sbjct: 452 FGFGDNERAQLGHDSLRGCLEPT 474
Score = 278 (102.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 93/333 (27%), Positives = 145/333 (43%)
Query: 298 AQSIACGSKHAVLV----TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
A S C S H V V T Q ++F+ EG+ +L +++ +++ G +
Sbjct: 60 AASQLC-SMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKM--QI 116
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
A G++HT + S +Y+ G + G+L SE + + Q++ +
Sbjct: 117 ATGKYHTLLINNS-KVYSCGVSLS--GVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQN 173
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVE 472
H+A + +G++ T GD + GH D S P+ VE LK + G+ H +
Sbjct: 174 HSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGL-HFTVFLS 232
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSIT 531
G +T G GQLGHGD R VP V+ I ++A G S
Sbjct: 233 REGHA-----------YTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYV 281
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR--YIEDIACGSYHIAVVSSK 589
+A+T G V+S GS LG + R+ K + +I ++ G H + S
Sbjct: 282 LAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSN 341
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
VYTWGKG G LGHGD +K TP ++ L +
Sbjct: 342 GRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374
Score = 264 (98.0 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 84/291 (28%), Positives = 133/291 (45%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R PK++E+ + +A G V ++++G ++ G + G+LGHG D PK+
Sbjct: 202 RPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKV 261
Query: 342 IDALNGSN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG-Q 399
++ L + +A G + AVT G +Y++G G N LG + PR + +
Sbjct: 262 VEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSG-SNF-CLGHGEQQDELQPRVIQAFK 319
Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
+G+ I + G H A+ S G+++T+G G GALGHGD + P+ + L V
Sbjct: 320 RKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQ 379
Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW-GDGAEGQLGHGDAE----PRVVPLCVK 514
T +VE G G F W G G+ G G ++ PRV+ C+K
Sbjct: 380 VCARKRKTFVLVE-GGLLYG---------FGWMGFGSLGFPDRGVSDKVLRPRVLE-CLK 428
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRI 564
+S +V+ G TI +T G++F G + QLG G PT I
Sbjct: 429 -PHRVS--QVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 258 (95.9 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 73/232 (31%), Positives = 108/232 (46%)
Query: 276 ISSADRRDALLPKVLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ D D +PKV+E + IA G + + VT+ G ++S+G GS LGHG +
Sbjct: 248 LGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQ 307
Query: 335 DVSYPKLIDALNGSNIHM--VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
D P++I A IH+ V+ G+ H A+ +G +YTWG G G LG E
Sbjct: 308 DELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGY--CGALGHGDENDKIT 365
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSV--PREV 449
P+ + L + +C T + G L+ FG FG+LG DR S V PR +
Sbjct: 366 PQVLVNLNNCLAVQ-VCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVL 424
Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
E LK + S G++HT + + G ++F +GD QLGH
Sbjct: 425 ECLKPHRVSQVSTGLYHTIVVTQ--------RG----RIFGFGDNERAQLGH 464
Score = 193 (73.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 49/178 (27%), Positives = 87/178 (48%)
Query: 276 ISSADRRDALLPKVLES--TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
+ +++D L P+V+++ + ++ G +HAV + G++++WG+G G LGHG E
Sbjct: 301 LGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDE 360
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE-ISHWI 392
D P+++ LN + + C V + G L +G G G LG +S +
Sbjct: 361 NDKITPQVLVNLNNC-LAVQVCARKRKTFVLVEGGLL-YGFGWMGFGSLGFPDRGVSDKV 418
Query: 393 PR-KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
R +V ++ ++S + G +HT +T G++F FGD LGH P E+
Sbjct: 419 LRPRVLECLKPHRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHDSLRGCLEPTEI 476
Score = 179 (68.1 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 60/236 (25%), Positives = 105/236 (44%)
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP-REVETLKELKTVMASCGVWH 466
I G +HT I ++ K+++ G G L HG ++ V +E + S H
Sbjct: 116 IATGKYHTLLINNS-KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNH 174
Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDISFCKVA 525
+A +++ SG ++ T GD + GH D + P P V+ +VA
Sbjct: 175 SAFVLQ-----SG-------QVLTCGDNSSHCCGHLDTSRPIFRPKLVEALKGTPCKQVA 222
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
G T+ L+ G ++ GS +GQLG + + P +E + IA G ++
Sbjct: 223 AGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVL 282
Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK--QVKSVVCGSNFTAAI 638
V+ VY++G G+N LGHG+ +++ P +++A + K + V G A+
Sbjct: 283 AVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVAL 338
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 338 (124.0 bits), Expect = 6.3e-27, P = 6.3e-27
Identities = 84/277 (30%), Positives = 141/277 (50%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
I CG H++ ++K G++F+WG+ G+LG G + A S P++++ L+G + ++ GE H
Sbjct: 153 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 212
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
+ A+++SG++Y+WG ++ G LG + P + ++ ++ + CG HTA +T
Sbjct: 213 SMALSMSGNVYSWGR--NDCGQLGLGHTYNKESPSCIEA-LDDQKVEFLACGGCHTALLT 269
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
+G +FTFGDG +G LGH + PR V L + +CG HT A V GK
Sbjct: 270 KSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTGK--- 326
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+F++G G EGQLG+G +++P +K+ K S+ + G
Sbjct: 327 --------VFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEEL-KSESSTSVKELIMVAGG 377
Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
S+ + K PT EG +K R+I D+
Sbjct: 378 NQSILIWMEKENSYVNLRRKIPTLNEGTVK-RWIADV 413
Score = 306 (112.8 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 78/226 (34%), Positives = 116/226 (51%)
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCG 463
I I CG +H+ A++ G+LF +G G LG G +STS P VE L + V S G
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAG 209
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
H+ A+ SG+ +++WG GQLG G + P C++ DD
Sbjct: 210 EAHSMAL-----SMSGN-------VYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEF 257
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
+ACG T LT +G VF+ G YGQLG + + P + G + +R + IACG H
Sbjct: 258 LACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNR-VTQIACGRQH 316
Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
+A VS +V+++G G GQLG+G N+ P ++ L +++KS
Sbjct: 317 TLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKS 362
Score = 274 (101.5 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 60/174 (34%), Positives = 100/174 (57%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E+ + I+ G H++ ++ G ++SWG G+LG G + P I+AL+
Sbjct: 192 PEIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALD 251
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ +ACG HT +T SG ++T+GDG + G LG S + PR V+G + G +++
Sbjct: 252 DQKVEFLACGGCHTALLTKSGLVFTFGDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVT 308
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKT 457
I CG HT A ++ GK+F+FG G G LG+G + +PR ++ L +ELK+
Sbjct: 309 QIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPRPMKLLSSEELKS 362
Score = 234 (87.4 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 60/188 (31%), Positives = 94/188 (50%)
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VP 510
L+E + +CG +H+ A+ S G +LF WG +GQLG G P
Sbjct: 145 LQEKNIIQITCGDYHSLAL---------SKG---GELFAWGQNLDGQLGVGRIFASTSTP 192
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
V+ + +++ G + ++AL+ +G V+S G D GQLG + K P+ IE +
Sbjct: 193 EIVENLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA-LD 251
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
+ +E +ACG H A+++ V+T+G G GQLGH +N+ P LV L +V +
Sbjct: 252 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 311
Query: 630 CGSNFTAA 637
CG T A
Sbjct: 312 CGRQHTLA 319
Score = 172 (65.6 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 41/119 (34%), Positives = 65/119 (54%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSP---GSTGKFPTRIEGNIKHRYIEDIACG 579
++ CG ++AL+ G++F+ G GQLG ST P +E N+ + I+ G
Sbjct: 152 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTST-PEIVE-NLSGVPLVQISAG 209
Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
H +S VY+WG+ GQLG G NK++P+ +EAL D++V+ + CG TA +
Sbjct: 210 EAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALL 268
Score = 166 (63.5 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 45/173 (26%), Positives = 80/173 (46%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I G K + QG+ S GK + + + + L NI + CG++H+
Sbjct: 102 IKLGKKMKIHSMDQGEEHMLVLSSDGK-PFEYKYSIEHARFQCILQEKNIIQITCGDYHS 160
Query: 361 CAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
A++ G+L+ WG + LG+ G++ S P V + G+ + I G H+ A++
Sbjct: 161 LALSKGGELFAWGQNLDGQLGV-GRIFA-STSTPEIVEN-LSGVPLVQISAGEAHSMALS 217
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
+G ++++G G LG G + P +E L + K +CG HTA + +
Sbjct: 218 MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTK 270
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 330 (121.2 bits), Expect = 6.7e-27, P = 6.7e-27
Identities = 96/333 (28%), Positives = 163/333 (48%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
+C + H++L+T +G+++SWG G+LGHG V P+LI+ L+ I ACG HT
Sbjct: 157 SCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTL 215
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
A+T +G ++ +G+ + +G LG ++ +P G I+ + CG + +
Sbjct: 216 ALTETGSVFAFGE--NKMGQLGLGNQTDA-VPSPAQIMYNGQPITKMACGAEFSMIMDCK 272
Query: 422 GKLFTFGDGTFGALGHGD------RSSTS------VPREVETLKELKTVMASCGVWHTAA 469
G L++FG +G LGH R+ VPR V E KT
Sbjct: 273 GNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIE-KTKDGQILPVPNVV 331
Query: 470 IVEVAGKTSGSNGLSS-KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--DISFCKVAC 526
+ +VA + + L S K++F+WG G G+LGH + + +VP VK+ D ++
Sbjct: 332 VRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYA 391
Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
G++ + A++ G +F G+ + S ST +P ++ R I +ACG I V
Sbjct: 392 GYTCSFAVSEVGGLFFWGATNT----SREST-MYPKAVQDLCGWR-IRSLACGKSSIIVA 445
Query: 587 SSKSEVYTWGKGAN-GQLGHGDNENKQTPTLVE 618
+ +S + +WG G+LG+GD++ K + E
Sbjct: 446 ADESTI-SWGPSPTFGELGYGDHKPKSSTAAQE 477
Score = 200 (75.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 58/194 (29%), Positives = 90/194 (46%)
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G+L FG + +G + VP++ + L + + A V V SGS
Sbjct: 104 GQLLIFGATNWDLIGRKE-----VPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 158
Query: 482 GLSSK------KLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIAL 534
S KL++WG +GQLGHGD + P ++ +S ++ ACG + T+AL
Sbjct: 159 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEV-IVSAACGRNHTLAL 217
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
T TG VF+ G GQLG T P+ + + I +ACG+ ++ K +Y+
Sbjct: 218 TETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYS 277
Query: 595 WGKGANGQLGHGDN 608
+G GQLGH +
Sbjct: 278 FGCPEYGQLGHNSD 291
Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 59/201 (29%), Positives = 99/201 (49%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
+LP + + VV D +ACG+ H +++ Q ++FSWG G G+LGH + D P+L+
Sbjct: 324 ILP--VPNVVVRD---VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 378
Query: 345 LN--GSNIHMVACGEFHTCAVTLS--GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
+ G + G +TC+ +S G L+ WG S S P+ V +
Sbjct: 379 FDFPGRGASQIYAG--YTCSFAVSEVGGLFFWG--------ATNTSRESTMYPKAVQ-DL 427
Query: 401 EGLQISSICCGPWHTAAITSAGK-LFTFGDG-TFGALGHGDRS--STSVPREVETLKELK 456
G +I S+ CG ++ I +A + ++G TFG LG+GD S++ +EV+TL +
Sbjct: 428 CGWRIRSLACGK--SSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIF 485
Query: 457 TVMASCGVWHTAAIVEVAGKT 477
+ + G H+ I +T
Sbjct: 486 SEQVAMGYSHSLVIARDESET 506
Score = 188 (71.2 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 79/313 (25%), Positives = 127/313 (40%)
Query: 339 PKLIDALNGSNIHMVACGEF--HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
P L G + V G H+ +T G L++WG + G LG PR +
Sbjct: 139 PHRYGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGR--NEKGQLGHGDTKRVEAPRLI 196
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
G + +S+ CG HT A+T G +F FG+ G LG G+++ +VP + + +
Sbjct: 197 EGLSHEVIVSA-ACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD-AVPSPAQIMYNGQ 254
Query: 457 TVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG---AEGQLGHGDAE--PRVVP 510
+ +CG + I++ G +L DG A Q D E PR V
Sbjct: 255 PITKMACGA-EFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVA 313
Query: 511 LCVKVSDD--------ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT 562
+ ++ + D + VACG + T+ L + +VFS G YG+LG +
Sbjct: 314 IFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVP 373
Query: 563 RIEG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
R+ + R I G VS ++ WG N E+ P V+ L
Sbjct: 374 RLVKLFDFPGRGASQIYAGYTCSFAVSEVGGLFFWG-ATNTS-----RESTMYPKAVQDL 427
Query: 621 RDKQVKSVVCGSN 633
+++S+ CG +
Sbjct: 428 CGWRIRSLACGKS 440
Score = 139 (54.0 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 525 ACG-HSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSY 581
+C HS+ I T G+++S G + GQLG G T + P IEG + H I ACG
Sbjct: 157 SCAAHSLLI--TTEGKLWSWGRNEKGQLGH-GDTKRVEAPRLIEG-LSHEVIVSAACGRN 212
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ-VKSVVCGSNFT 635
H ++ V+ +G+ GQLG G N+ P+ + + + Q + + CG+ F+
Sbjct: 213 HTLALTETGSVFAFGENKMGQLGLG-NQTDAVPSPAQIMYNGQPITKMACGAEFS 266
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 22/71 (30%), Positives = 43/71 (60%)
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
++ R + +C + H +++++ ++++WG+ GQLGHGD + + P L+E L + + S
Sbjct: 148 VRVRTVVSGSCAA-HSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVS 206
Query: 628 VVCGSNFTAAI 638
CG N T A+
Sbjct: 207 AACGRNHTLAL 217
Score = 130 (50.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 35/113 (30%), Positives = 55/113 (48%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D + P+++E S ACG H + +T+ G +F++GE G+LG G + D
Sbjct: 182 LGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTD 241
Query: 336 -VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
V P I NG I +ACG + + G+LY++G G LG S+
Sbjct: 242 AVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLYSFG--CPEYGQLGHNSD 291
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 625 VKSVVCGSNFTAAICLHKGV 644
V+ V CG+N T + K V
Sbjct: 332 VRDVACGANHTLVLDSQKRV 351
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 331 (121.6 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 91/310 (29%), Positives = 143/310 (46%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL G
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLG 448
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H A++ G+L+ WG G + G LG + SH P++V G +
Sbjct: 449 YEMVQVACGASHVLALSTDGELFAWGRG--DGGRLGLGTRESHNCPQQVP-VAPGQEAQR 505
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALG--HGDRSSTSVP-REVETLKELKTVMASCGV 464
+ CG + +TS G++ G F LG H VP ++VE T + S +
Sbjct: 506 VVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSF-TPLGSAPL 564
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
+ G + +S +T+G GQLG P V+ + I V
Sbjct: 565 DQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMV 624
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSY 581
ACG + T+A+ A G+V+S G G+LG P ++ + H Y + ++C G+
Sbjct: 625 ACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSCCHGNT 684
Query: 582 HIAVVSSKSE 591
+AV S E
Sbjct: 685 LLAVRSVTDE 694
Score = 310 (114.2 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 99/323 (30%), Positives = 145/323 (44%)
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW-----GDGIHNLGLLGQVS-EIS 389
+S P + LN + + VA G VT SG L W G G L L G V
Sbjct: 327 LSSPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGTL-LPGAVELPQP 384
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
++ R + GQ G+ I + CG TA +T G + TFG G+ G LGHG+ + S P V
Sbjct: 385 QFVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIV 443
Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
E L + V +CG H A+ T G +LF WG G G+LG G E
Sbjct: 444 EALLGYEMVQVACGASHVLAL-----STDG-------ELFAWGRGDGGRLGLGTRESHNC 491
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPT---RIE 565
P V V+ +V CG ++ LT+ G+V + GS + +LG S + P ++E
Sbjct: 492 PQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVE 551
Query: 566 GNIKHRYI-------EDIAC---GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
+ + E + C G+ H A +++ + YT+G +GQLG + P
Sbjct: 552 EALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPC 611
Query: 616 LVEALRDKQVKSVVCGSNFTAAI 638
V+ L ++ V CG FT A+
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAV 634
Score = 310 (114.2 bits), Expect = 3.6e-24, P = 3.6e-24
Identities = 98/344 (28%), Positives = 157/344 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSW-----GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMV 353
+A G VT+ G++ W G G G L VE + ++ +G I V
Sbjct: 343 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHV 402
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
ACG+ T +T G + T+G G + LG G +++IS P V + G ++ + CG
Sbjct: 403 ACGDLFTACLTDRGIIMTFGSGSNGCLGH-GNLTDISQ--PTIVEALL-GYEMVQVACGA 458
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A+++ G+LF +G G G LG G R S + P++V + CG+ ++ I+
Sbjct: 459 SHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGI-DSSMILT 517
Query: 473 VAGKT--SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV--VPLCVKVSDDISFCKVACGH 528
G+ GSN + L E + + E + PL D V G
Sbjct: 518 SPGRVLACGSNRFNKLGLDHLSLDEE-PVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGT 576
Query: 529 SITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ + A+TA+G ++ GS +GQLG S + P R++G ++ + +ACG V
Sbjct: 577 AHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQG-LEGIKMVMVACGDAFTVAVG 635
Query: 588 SKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
++ EVY+WGKG G+LG D + P ++ V SV C
Sbjct: 636 AEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSC 679
Score = 264 (98.0 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 75/264 (28%), Positives = 123/264 (46%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ G++F+WG G GG+LG G + P+ +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQV 495
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL--LG---------QVSEISH 390
G V CG + +T G + G N LGL L QV E
Sbjct: 496 PVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALS 555
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
+ P S ++ + + G H+AAIT++G +TFG G LG R + P V+
Sbjct: 556 FTPLG-SAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQ 614
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L+ +K VM +CG T A+ G+ G ++++WG G G+LG D E +P
Sbjct: 615 GLEGIKMVMVACGDAFTVAV--------GAEG----EVYSWGKGTRGRLGRRD-EDAGLP 661
Query: 511 LCVKVSDDISFC--KVACGHSITI 532
V++ + + V+C H T+
Sbjct: 662 RPVQLDETHPYMVTSVSCCHGNTL 685
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 326 (119.8 bits), Expect = 2.2e-26, P = 2.2e-26
Identities = 93/304 (30%), Positives = 144/304 (47%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ VT ++F +G LG G PK ++AL G I ++ G H
Sbjct: 31 ASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLS 90
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G
Sbjct: 91 TEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADG 147
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA-GKTSGSN 481
+LF +G G +G G ++ PR+V +C HT +V +A G+TS
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKV----------TNC--LHTKKVVNIACGQTSSMA 195
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
L S +++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G ++
Sbjct: 196 VLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLY 255
Query: 542 SMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKG 598
+ G+ YGQLG+ GS PT+I K R IE AC S H + ++ VY WG+
Sbjct: 256 AWGANTYGQLGT-GSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWGQ- 312
Query: 599 ANGQ 602
GQ
Sbjct: 313 CRGQ 316
Score = 287 (106.1 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 79/226 (34%), Positives = 113/226 (50%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
+T + ++F FG LG GD ST VP+++E L K +K++ G H E
Sbjct: 37 VTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGP-HVLLSTE--- 92
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIAL 534
+G+ ++ WG QLG+G + P+ V + + +VACG ++AL
Sbjct: 93 -----DGV----VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMAL 143
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKH-RYIEDIACGSYHIAVVSSKSEV 592
A G++F+ G + GQ+GS GST PT R N H + + +IACG V EV
Sbjct: 144 AADGELFAWGYNNCGQVGS-GSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEV 202
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
Y WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGVCVNQIVCGYAHTLAL 248
Score = 272 (100.8 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 76/273 (27%), Positives = 126/273 (46%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + D + L+PK LE+ +S++ GS H +L T+ G +++WG +LG+G
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 335 DVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
P ++ L + VACG H+ A+ G+L+ WG +N G +G S + P
Sbjct: 114 QGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWG--YNNCGQVGSGSTANQPTP 171
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
RKV+ + ++ +I CG + A+ +G+++ +G G LG G+ + P V L
Sbjct: 172 RKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ CG HT A+ + GL L+ WG GQLG G + P +
Sbjct: 232 GVCVNQIVCGYAHTLALTD--------EGL----LYAWGANTYGQLGTGSKNNLLSPTQI 279
Query: 514 KVSDDISFCKVACGHSI--TIALTATGQVFSMG 544
V + ++A HS + A T G V+ G
Sbjct: 280 MVEKE-RVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 268 (99.4 bits), Expect = 6.9e-20, P = 6.9e-20
Identities = 65/213 (30%), Positives = 114/213 (53%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALN 346
+V + +V +ACGS H++ + G++F+WG + G++G G A+ P K+ + L+
Sbjct: 120 QVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLH 179
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ +ACG+ + AV SG++Y WG +G LGL ++++ P +V+ + G+ +
Sbjct: 180 TKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAA-LHGVCV 235
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ I CG HT A+T G L+ +G T+G LG G +++ P ++ KE +A+C
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHST 295
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
HT+A KT G + ++ WG GQ
Sbjct: 296 HTSA-----AKTQGGH------VYMWGQ-CRGQ 316
Score = 248 (92.4 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 77/282 (27%), Positives = 129/282 (45%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSA 421
VT S +++ +G N LG S +P+K+ + G +I S+ G H T
Sbjct: 37 VTDSDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEA-LCGKRIKSLSYGSGPHVLLSTED 93
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGS 480
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+ +
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALA--------A 145
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+G +LF WG GQ+G G PR V C+ ++ +ACG + ++A+
Sbjct: 146 DG----ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVN---IACGQTSSMAVLD 198
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTW 595
+G+V+ G GQLG G+ G T + H + I CG H ++ + +Y W
Sbjct: 199 SGEVYGWGYNGNGQLGL-GNNGNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G GQLG G N +PT + +++ ++ C S T+A
Sbjct: 258 GANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 330 (121.2 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 89/309 (28%), Positives = 143/309 (46%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL G
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLG 448
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H A++ G+L+ WG G + G LG + SH P++V + G +
Sbjct: 449 YEMVQVACGASHVLALSADGELFAWGRG--DGGRLGLGTRESHNCPQQVP-MVPGQEAQR 505
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK--TVMASCGVW 465
+ CG + +TS G++ G F LG S P + ++E T + S +
Sbjct: 506 VVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTPLGSAPLD 565
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
+ G + +S +T+G GQLG P V+ + I VA
Sbjct: 566 RETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVA 625
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYH 582
CG + T+A+ A G+V+S G G+LG P ++ + H Y + ++C G+
Sbjct: 626 CGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTL 685
Query: 583 IAVVSSKSE 591
+AV S E
Sbjct: 686 LAVRSVTDE 694
Score = 315 (115.9 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 99/344 (28%), Positives = 159/344 (46%)
Query: 301 IACGSKHAVLVTKQGQIFSW-----GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMV 353
+A G VT+ G++ W G G G L VE + ++ +G I V
Sbjct: 343 VAAGRTQKAGVTRSGRLILWEAPPLGTGGGTLLPGAVELPQPQFVSRFLEGQSGVTIKHV 402
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
ACG+ T +T G + T+G G + LG G +++IS P V + G ++ + CG
Sbjct: 403 ACGDLFTACLTDRGIIMTFGSGSNGCLGH-GSLTDISQ--PTIVEALL-GYEMVQVACGA 458
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A+++ G+LF +G G G LG G R S + P++V + + CG+ + I+
Sbjct: 459 SHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQRVVCGI-DCSMILT 517
Query: 473 VAGKT--SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV--VPLCVKVSDDISFCKVACGH 528
G+ GSN + L E + H E + PL D + V G
Sbjct: 518 SPGRVLACGSNRFNKLGLDCLSLEEE-PVPHQQVEEALSFTPLGSAPLDRETLLCVDLGT 576
Query: 529 SITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ + A+TA+G ++ GS +GQLG S + P R++G ++ + +ACG +
Sbjct: 577 AHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQG-LEGIKMVMVACGDAFTVAIG 635
Query: 588 SKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
++ EVY+WGKGA G+LG D + P ++ V SV C
Sbjct: 636 AEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 679
Score = 293 (108.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 98/323 (30%), Positives = 142/323 (43%)
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW-----GDGIHNLGLLGQVS-EIS 389
+S P + N + + VA G VT SG L W G G L L G V
Sbjct: 327 LSIPLRLPMPN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGTGGGTL-LPGAVELPQP 384
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
++ R + GQ G+ I + CG TA +T G + TFG G+ G LGHG + S P V
Sbjct: 385 QFVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIV 443
Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
E L + V +CG H A+ ++G +LF WG G G+LG G E
Sbjct: 444 EALLGYEMVQVACGASHVLAL--------SADG----ELFAWGRGDGGRLGLGTRESHNC 491
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPT---RIE 565
P V + +V CG ++ LT+ G+V + GS + +LG S + P ++E
Sbjct: 492 PQQVPMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVE 551
Query: 566 GNIKHRYI-------EDIAC---GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
+ + E + C G+ H A V++ YT+G +GQLG + P
Sbjct: 552 EALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPC 611
Query: 616 LVEALRDKQVKSVVCGSNFTAAI 638
V+ L ++ V CG FT AI
Sbjct: 612 RVQGLEGIKMVMVACGDAFTVAI 634
Score = 270 (100.1 bits), Expect = 8.4e-20, P = 8.4e-20
Identities = 77/264 (29%), Positives = 126/264 (47%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ G++F+WG G GG+LG G + P+ +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQV 495
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL--LGQVSE-ISHW-IPRKVS 397
+ G V CG + +T G + G N LGL L E + H + +S
Sbjct: 496 PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALS 555
Query: 398 GQMEG---LQISSICC---GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
G L ++ C G H+AA+T++G +TFG G LG R + P V+
Sbjct: 556 FTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQHGQLGTSSRRVSRAPCRVQG 615
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---PRV 508
L+ +K VM +CG T AI G+ G ++++WG GA G+LG D + PR
Sbjct: 616 LEGIKMVMVACGDAFTVAI--------GAEG----EVYSWGKGARGRLGRRDEDAGLPR- 662
Query: 509 VPLCVKVSDDISFCKVACGHSITI 532
P+ + + + V+C H T+
Sbjct: 663 -PVQLDETHPYTVTSVSCCHGNTL 685
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 333 (122.3 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 104/357 (29%), Positives = 172/357 (48%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G +H++L+ ++ S G+ S G+LG P+ I AL + +V+CG+ H+
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
AV G ++ WG G LG+ G+ EIS + P+K+ + ++I + CG +H+ A++
Sbjct: 89 AVCHKGRVFAWGAGSEGQLGI-GEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSK 145
Query: 421 AGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
++F++G + G LG G S + P+ V +L+ + + G H+ A+ + G TS
Sbjct: 146 DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCG-TS- 202
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTA 536
F WG + GQL V PL V ++ ++CG + T LT
Sbjct: 203 ---------FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQ 253
Query: 537 TGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
G+VF+ G GQLG SP + P +E I + I CGSYH +A V + +V +
Sbjct: 254 DGKVFTFGDNRSGQLGYSPTPEKRGPQLVE-RIDG-LVSQIDCGSYHTLAYVHTTGQVVS 311
Query: 595 WGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGSNFTAAICLHKGVS 645
+G G + + H + EN L+ A D QVK + G+ + + H+ S
Sbjct: 312 FGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGT-YANFVTTHQDTS 367
Score = 332 (121.9 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 85/265 (32%), Positives = 137/265 (51%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
LP+ +++ L ++CG +H++ V +G++F+WG GS G+LG G ++S+ PK I
Sbjct: 65 LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
LN I V+CG +H+ A++ +++WG H G LG E S P++V +EG+
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
++ + G H+ A++ G F +G + G L R+ ++ P V LK L V
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
SCG HTA + + +G K+FT+GD GQLG+ + P V+ D +
Sbjct: 242 SCGDAHTAVLTQ--------DG----KVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL- 288
Query: 521 FCKVACGHSITIALT-ATGQVFSMG 544
++ CG T+A TGQV S G
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 243 (90.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 71/251 (28%), Positives = 116/251 (46%)
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
R+ +G G ++ G H+ + + ++ + GD + G LG +P ++ L+
Sbjct: 15 RRTAGS-PGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALE 73
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLC 512
L + SCG H+ A+ G ++F WG G+EGQLG G+ E P
Sbjct: 74 TLIVDLVSCGKEHSLAVCH--------KG----RVFAWGAGSEGQLGIGEFKEISFTPKK 121
Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKH 570
+ +DI +V+CGH ++AL+ QVFS G +GQLG + P R+ +++
Sbjct: 122 IMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVR-SLEG 180
Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDKQVKS 627
+ +A G H +S + WG + GQL G N Q+ P V AL++ V
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVY 240
Query: 628 VVCGSNFTAAI 638
+ CG TA +
Sbjct: 241 ISCGDAHTAVL 251
Score = 134 (52.2 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 23/76 (30%), Positives = 47/76 (61%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+CG H ++T+ G++F++G+ G+LG+ + P+L++ ++G + + CG +HT
Sbjct: 241 ISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL-VSQIDCGSYHT 299
Query: 361 CA-VTLSGDLYTWGDG 375
A V +G + ++G G
Sbjct: 300 LAYVHTTGQVVSFGHG 315
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 325 (119.5 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 93/304 (30%), Positives = 144/304 (47%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ VT ++F +G LG G PK ++AL G I ++ G H
Sbjct: 31 ANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLT 90
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G
Sbjct: 91 TEDGVVYAWG---HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA-GKTSGSN 481
+LF +G G +G G ++ PR+V +C HT +V +A G+TS
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKV----------TNC--LHTKRVVNIACGQTSSMA 195
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
L S +++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G ++
Sbjct: 196 VLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 255
Query: 542 SMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKG 598
+ G+ YGQLG+ GS PT+I K R IE AC S H + ++ VY WG+
Sbjct: 256 AWGANTYGQLGT-GSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWGQ- 312
Query: 599 ANGQ 602
GQ
Sbjct: 313 CRGQ 316
Score = 287 (106.1 bits), Expect = 5.3e-22, P = 5.3e-22
Identities = 80/226 (35%), Positives = 113/226 (50%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
+T ++F FG LG GD ST VP+++E L K++K++ G H E
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTE--- 92
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIAL 534
+G+ ++ WG QLG+G + P+ V + I +VACG ++AL
Sbjct: 93 -----DGV----VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKH-RYIEDIACGSYHIAVVSSKSEV 592
A G++F+ G + GQ+GS GST PT R N H + + +IACG V EV
Sbjct: 144 AADGELFAWGYNNCGQVGS-GSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
Y WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLAL 248
Score = 275 (101.9 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 76/273 (27%), Positives = 126/273 (46%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + D + L+PK LE+ +S++ GS H +L T+ G +++WG +LG+G
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 335 DVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
P ++ L + VACG H+ A+ G+L+ WG +N G +G S + P
Sbjct: 114 QGIAPVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWG--YNNCGQVGSGSTANQPTP 171
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
RKV+ + ++ +I CG + A+ +G+++ +G G LG G+ + P V L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ CG HT A+ + GL L+ WG GQLG G + P +
Sbjct: 232 GMCVNQIVCGYAHTLALTD--------EGL----LYAWGANTYGQLGTGSKNNLLSPTQI 279
Query: 514 KVSDDISFCKVACGHSI--TIALTATGQVFSMG 544
V + ++A HS + A T G V+ G
Sbjct: 280 MVEKE-RVIEIAACHSTHTSAAKTQGGHVYMWG 311
Score = 267 (99.0 bits), Expect = 8.9e-20, P = 8.9e-20
Identities = 64/213 (30%), Positives = 114/213 (53%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALN 346
+V + ++ +ACGS H++ + G++F+WG + G++G G A+ P K+ + L+
Sbjct: 120 QVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLH 179
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ +ACG+ + AV SG++Y WG +G LGL ++++ P +V+ + G+ +
Sbjct: 180 TKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAA-LHGMCV 235
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ I CG HT A+T G L+ +G T+G LG G +++ P ++ KE +A+C
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHST 295
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
HT+A KT G + ++ WG GQ
Sbjct: 296 HTSA-----AKTQGGH------VYMWGQ-CRGQ 316
Score = 246 (91.7 bits), Expect = 1.9e-17, P = 1.9e-17
Identities = 76/282 (26%), Positives = 129/282 (45%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSA 421
VT + +++ +G N LG S +P+K+ + G +I S+ G H T
Sbjct: 37 VTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLTTED 93
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGS 480
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+ +
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALA--------A 145
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+G +LF WG GQ+G G PR V C+ ++ +ACG + ++A+
Sbjct: 146 DG----ELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVN---IACGQTSSMAVLD 198
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTW 595
+G+V+ G GQLG G+ G T + H + I CG H ++ + +Y W
Sbjct: 199 SGEVYGWGYNGNGQLGL-GNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G GQLG G N +PT + +++ ++ C S T+A
Sbjct: 258 GANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 324 (119.1 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 89/320 (27%), Positives = 158/320 (49%)
Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
E + + A + A+ +T +++ G LG G PK +D L+G +
Sbjct: 17 ELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKL 76
Query: 351 HMVACGEF-HTCAVTLSGDLYTWG-DGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISS 407
++ G H VT G+LY WG +G LG G ++ +S P VS ++G +++
Sbjct: 77 ISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGN-GTTNQGVS---PILVSTNLQGKRVTE 132
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWH 466
+ CG H+ A+T G++F +G G +G G ++ PR+V + K ++ +CG
Sbjct: 133 VSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTS 192
Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC--KV 524
+ A+ + NG +++ WG GQLG G+ ++ P C ++ FC ++
Sbjct: 193 SMAVTD--------NG----EVYGWGYNGNGQLGLGNNGNQLTP-CRLIALQ-GFCVLQI 238
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHI 583
A G++ ++ALT G +++ G+ YGQLG+ + + P ++ K R +E AC S H
Sbjct: 239 ASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTE-KERIVEIAACHSTHT 297
Query: 584 AVVSSKS-EVYTWGKGANGQ 602
+ ++S +VY WG+ GQ
Sbjct: 298 SAAKTQSGQVYMWGQ-CRGQ 316
Score = 264 (98.0 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 72/225 (32%), Positives = 110/225 (48%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW-HTAAIVEVAGK 476
IT +++ G LG GD ST P++++ L K + S G H + E
Sbjct: 37 ITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDCLSGKKLISLSYGSGPHVLLVTE---- 92
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS-DDISFCKVACGHSITIALT 535
+G +L+ WG QLG+G V P+ V + +V+CG ++ALT
Sbjct: 93 ----DG----ELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGKRVTEVSCGSHHSLALT 144
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
G+VF+ G + GQ+GS GST PT ++ ++++ I +IACG V+ EVY
Sbjct: 145 HEGEVFAWGYNNCGQVGS-GSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVY 203
Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
WG NGQLG G+N N+ TP + AL+ V + G + A+
Sbjct: 204 GWGYNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIASGYAHSLAL 248
Score = 169 (64.5 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
L++ V+++ IACG ++ VT G+++ WG G+LG G + P + AL G
Sbjct: 178 LQNKVIVN---IACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIALQGFC 234
Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
+ +A G H+ A+T G LY WG + G LG ++ + P +V + E + +
Sbjct: 235 VLQIASGYAHSLALTDEGLLYAWGANTY--GQLGTGNKSNQLSPVQVMTEKERI-VEIAA 291
Query: 410 CGPWHT-AAITSAGKLFTFG 428
C HT AA T +G+++ +G
Sbjct: 292 CHSTHTSAAKTQSGQVYMWG 311
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 328 (120.5 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 101/344 (29%), Positives = 160/344 (46%)
Query: 301 IACGSKHAVLVTKQGQIFSW-----GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMV 353
+A G VT+ G++ W G G G L VE + ++ +G I V
Sbjct: 343 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVTIKHV 402
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
ACG+ T +T G + T+G G + LG G +++IS P V + G ++ + CG
Sbjct: 403 ACGDLFTACLTDRGIIMTFGSGSNGCLGH-GGLNDISQ--PTIVEALL-GYEMVQVACGA 458
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A+++ +LF +G G G LG G R S S P++V + CG+ ++ I+
Sbjct: 459 SHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGI-DSSVILT 517
Query: 473 VAGKT--SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV--VPLCVKVSDDISFCKVACGH 528
V G+ GSN + L G E L H E + PL D V G
Sbjct: 518 VPGQALACGSNRFNKLGLDHLSLGEEPAL-HQQVEEALNFTPLGSAPLDQEPLLSVDLGT 576
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ + A+TA+G ++ GS +GQLG+ + P +++G ++ I +ACG +
Sbjct: 577 AHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQG-LQGIKIAMVACGDAFTVAIG 635
Query: 588 SKSEVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVVC 630
++ EVY+WGKGA G+LG D + P ++ + V SV C
Sbjct: 636 AEGEVYSWGKGARGRLGRRDEDAALPRPVQLDETQPYTVTSVSC 679
Score = 309 (113.8 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 97/322 (30%), Positives = 143/322 (44%)
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD---GIHNLGLL-GQVSEIS-H 390
+S P + LN + + VA G VT SG L W G LL G V +
Sbjct: 327 LSAPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQ 385
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
++ R + GQ G+ I + CG TA +T G + TFG G+ G LGHG + S P VE
Sbjct: 386 FVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVE 444
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L + V +CG H A+ + ++LF WG G G+LG G E P
Sbjct: 445 ALLGYEMVQVACGASHVLALS------------TERELFAWGRGDGGRLGLGTRESHSCP 492
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPT---RIE- 565
V + +V CG ++ LT GQ + GS + +LG S G+ P ++E
Sbjct: 493 QQVPMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEE 552
Query: 566 -------GN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
G+ + + + G+ H A V++ + YT+G +GQLG + P
Sbjct: 553 ALNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQ 612
Query: 617 VEALRDKQVKSVVCGSNFTAAI 638
V+ L+ ++ V CG FT AI
Sbjct: 613 VQGLQGIKIAMVACGDAFTVAI 634
Score = 296 (109.3 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 81/294 (27%), Positives = 130/294 (44%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL G
Sbjct: 389 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLG 448
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H A++ +L+ WG G + G LG + SH P++V G +
Sbjct: 449 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHSCPQQVP-MPPGQEAQR 505
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK--TVMASCGVW 465
+ CG + +T G+ G F LG S P + ++E T + S +
Sbjct: 506 VICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALNFTPLGSAPLD 565
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
+ G + +S +T+G GQLG P V+ I VA
Sbjct: 566 QEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQGIKIAMVA 625
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC 578
CG + T+A+ A G+V+S G G+LG P ++ + Y + ++C
Sbjct: 626 CGDAFTVAIGAEGEVYSWGKGARGRLGRRDEDAALPRPVQLDETQPYTVTSVSC 679
Score = 276 (102.2 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 77/264 (29%), Positives = 127/264 (48%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ + ++F+WG G GG+LG G S P+ +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQV 495
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL----LG-------QVSEISH 390
G V CG + +T+ G G N LGL LG QV E +
Sbjct: 496 PMPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGLDHLSLGEEPALHQQVEEALN 555
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
+ P S ++ + S+ G H+AA+T++G +TFG G LG R + P +V+
Sbjct: 556 FTPLG-SAPLDQEPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ 614
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L+ +K M +CG T AI G+ G ++++WG GA G+LG D E +P
Sbjct: 615 GLQGIKIAMVACGDAFTVAI--------GAEG----EVYSWGKGARGRLGRRD-EDAALP 661
Query: 511 LCVKVSDDISFC--KVACGHSITI 532
V++ + + V+C H T+
Sbjct: 662 RPVQLDETQPYTVTSVSCCHGNTL 685
Score = 195 (73.7 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 55/188 (29%), Positives = 92/188 (48%)
Query: 470 IVEVA-GKTSGSNGLSSKKLFTW-----GDGAEGQLGHGDAE---PRVVPLCVKVSDDIS 520
+V+VA G+T + S +L W G G G L G E P+ V ++ ++
Sbjct: 340 VVQVAAGRTQKAGVTRSGRLILWEAPPLGAGG-GALLPGAVEQQQPQFVSRFLEGQSGVT 398
Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACG 579
VACG T LT G + + GS G LG G PT +E + + ++ +ACG
Sbjct: 399 IKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGGLNDISQPTIVEALLGYEMVQ-VACG 457
Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
+ H+ +S++ E++ WG+G G+LG G E+ P V ++ + V+CG + ++ I
Sbjct: 458 ASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQRVICGID-SSVIL 516
Query: 640 LHKGVSIA 647
G ++A
Sbjct: 517 TVPGQALA 524
Score = 38 (18.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 777 SNKISASPPGSRRVSRAPSPI 797
SN+ +RRVSRAP +
Sbjct: 593 SNQHGQLGTNARRVSRAPCQV 613
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 328 (120.5 bits), Expect = 3.8e-26, P = 3.8e-26
Identities = 103/345 (29%), Positives = 158/345 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSW-----GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMV 353
+A G VT+ G++ W G G G L VE + ++ +G I V
Sbjct: 346 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQFVSRFLEGQSGVTIKHV 405
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
ACG+ T +T G + T+G G + LG G +++IS P V + G ++ + CG
Sbjct: 406 ACGDLFTACLTDRGIIMTFGSGSNGCLGH-GSLNDISQ--PTIVEALL-GYEMVQVACGA 461
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A+++ +LF +G G G LG G R S S P++V + CG+ ++ I+
Sbjct: 462 SHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQVSMPPGQEAQRVVCGI-DSSMILT 520
Query: 473 VAGKT--SGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHS 529
V G+ GSN + L G E E PL D V G +
Sbjct: 521 VPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFDREPLLSVDLGTA 580
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGS-TGKFPTRIEG--NIKHRYIEDIACGSYHIAVV 586
+ A+TA+G ++ GS +GQLG+ + P +++G NIK I +ACG V
Sbjct: 581 HSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIK---IAMVACGDAFTVAV 637
Query: 587 SSKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
++ EVY+WGKGA G+LG D + P ++ + V SV C
Sbjct: 638 GAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDEIHPYTVTSVSC 682
Score = 311 (114.5 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 87/303 (28%), Positives = 140/303 (46%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL G
Sbjct: 392 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 451
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H A++ +L+ WG G + G LG + SH P++VS G +
Sbjct: 452 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHSCPQQVS-MPPGQEAQR 508
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE-LKTVMASCGVWH 466
+ CG + +T G+ G F LG S P + ++E L +
Sbjct: 509 VVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALSFTPLGSAPFD 568
Query: 467 TAAIVEVAGKTSGSNGLS-SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
++ V T+ S ++ S +T+G GQLG P V+ +I VA
Sbjct: 569 REPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQGLQNIKIAMVA 628
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYH 582
CG + T+A+ A G+V+S G G+LG P ++ + H Y + ++C G+
Sbjct: 629 CGDAFTVAVGAEGEVYSWGKGARGRLGRRDEDAGLPRPVQLDEIHPYTVTSVSCCHGNTL 688
Query: 583 IAV 585
+AV
Sbjct: 689 LAV 691
Score = 305 (112.4 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 95/322 (29%), Positives = 143/322 (44%)
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD---GIHNLGLL-GQVSEIS-H 390
+S P + LN + + VA G VT SG L W G LL G V +
Sbjct: 330 LSAPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAVEQQQPQ 388
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
++ R + GQ G+ I + CG TA +T G + TFG G+ G LGHG + S P VE
Sbjct: 389 FVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVE 447
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L + V +CG H A+ + ++LF WG G G+LG G E P
Sbjct: 448 ALLGYEMVQVACGASHVLALS------------TERELFAWGRGDGGRLGLGTRESHSCP 495
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPT---RIE- 565
V + +V CG ++ LT G+ + GS + +LG S G+ P ++E
Sbjct: 496 QQVSMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEE 555
Query: 566 -------GN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
G+ + + G+ H A V++ + YT+G +GQLG + P
Sbjct: 556 ALSFTPLGSAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQ 615
Query: 617 VEALRDKQVKSVVCGSNFTAAI 638
V+ L++ ++ V CG FT A+
Sbjct: 616 VQGLQNIKIAMVACGDAFTVAV 637
Score = 271 (100.5 bits), Expect = 6.6e-20, P = 6.6e-20
Identities = 78/265 (29%), Positives = 127/265 (47%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ + ++F+WG G GG+LG G S P+ +
Sbjct: 439 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHSCPQQV 498
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL----LG-------QVSEISH 390
G V CG + +T+ G G N LGL LG QV E
Sbjct: 499 SMPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGLDRLSLGEEPAPNQQVEEALS 558
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
+ P S + + S+ G H+AA+T++G +TFG G LG R + P +V+
Sbjct: 559 FTPLG-SAPFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRVSRAPCQVQ 617
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L+ +K M +CG T A+ G+ G ++++WG GA G+LG D E +P
Sbjct: 618 GLQNIKIAMVACGDAFTVAV--------GAEG----EVYSWGKGARGRLGRRD-EDAGLP 664
Query: 511 LCVKVSDDI---SFCKVACGHSITI 532
V++ D+I + V+C H T+
Sbjct: 665 RPVQL-DEIHPYTVTSVSCCHGNTL 688
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 330 (121.2 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 87/284 (30%), Positives = 148/284 (52%)
Query: 301 IACGSKHAVLVTKQ--GQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGE 357
I CG H++ ++K G++F+WG+ G+LG G + + P+L++ L+G + ++ G+
Sbjct: 140 ITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 199
Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A+++SG++Y+WG ++LG LG P + ++ ++ + CG HTA
Sbjct: 200 AHSMALSMSGNIYSWGR--NDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGGSHTAL 256
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV-WHTAAIVEVAGK 476
+T G +FTFG G +G LGH + PR V L + +CG WHT A V GK
Sbjct: 257 LTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGSRWHTLAYVSDLGK 316
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--SDDISF-CKVACGHSITIA 533
+F++G G EGQLG+G +++PL +K+ ++++ F + + I IA
Sbjct: 317 -----------VFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIA 365
Query: 534 LTATGQVFSMGSAD-YGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
+ MG + Y L + PT EG +K R+I D+
Sbjct: 366 GGNQSILLWMGKKNPYVNLRR-----RIPTLNEGTVK-RWIADV 403
Score = 266 (98.7 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 73/228 (32%), Positives = 113/228 (49%)
Query: 405 ISSICCGPWHTAAITSA--GKLFTFGDGTFGALGHGDRSSTSVPRE--VETLKELKTVMA 460
I I CG +H+ A++ G+LF +G G LG G R TS+P VE L + V
Sbjct: 137 IIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVG-RLFTSIPTPQLVEHLSGVPLVQI 195
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
S G H+ A+ SG+ +++WG GQLG G P ++ D+
Sbjct: 196 SAGKAHSMAL-----SMSGN-------IYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQK 243
Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
+ACG S T LT G VF+ G+ YGQLG + + R+ + + +ACGS
Sbjct: 244 VEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGS 303
Query: 581 -YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
+H +A VS +V+++G G GQLG+G N+ P ++ ++++K
Sbjct: 304 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 351
Score = 259 (96.2 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 60/185 (32%), Positives = 98/185 (52%)
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VP 510
L+E + +CG +H+ A+ + G G +LF WG GQLG G + P
Sbjct: 132 LQEKSIIQITCGDYHSLAL------SKGQGG----ELFAWGQNLHGQLGVGRLFTSIPTP 181
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
V+ + +++ G + ++AL+ +G ++S G D GQLG + G+ FP+ IE +
Sbjct: 182 QLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA-LD 240
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
++ +E +ACG H A+++ V+T+G G GQLGH +N+ P LV L +V V
Sbjct: 241 NQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVA 300
Query: 630 CGSNF 634
CGS +
Sbjct: 301 CGSRW 305
Score = 255 (94.8 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 57/174 (32%), Positives = 97/174 (55%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E + I+ G H++ ++ G I+SWG G+LG G +P LI+AL+
Sbjct: 181 PQLVEHLSGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALD 240
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ +ACG HT +T G ++T+G G + G LG S + PR V+ ++ G +++
Sbjct: 241 NQKVEFLACGGSHTALLTKDGLVFTFGAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVT 297
Query: 407 SICCGP-WHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVP--REVETLKELK 456
+ CG WHT A ++ GK+F+FG G G LG+G + +P ++ + +ELK
Sbjct: 298 QVACGSRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELK 351
Score = 167 (63.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 36/122 (29%), Positives = 65/122 (53%)
Query: 520 SFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDI 576
S ++ CG HS+ ++ G++F+ G +GQLG PT ++ ++ + I
Sbjct: 136 SIIQITCGDYHSLALSKGQGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQI 195
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
+ G H +S +Y+WG+ GQLG G + P+L+EAL +++V+ + CG + TA
Sbjct: 196 SAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTA 255
Query: 637 AI 638
+
Sbjct: 256 LL 257
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 319 (117.4 bits), Expect = 5.3e-26, P = 5.3e-26
Identities = 108/366 (29%), Positives = 161/366 (43%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+CG +H V G +F+WG G+LG G E +PK + L + V+CG F T
Sbjct: 66 ISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCT 125
Query: 361 CAVTLSGDLYTWGDGI---HNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTA 416
A+ + DG L + GQ ++ S+ +PR SG I + CG H
Sbjct: 126 AAIAEPRE----NDGTLSTSRLWVWGQ-NQGSN-LPRLFSGAFPATTAIRQVSCGTAHVV 179
Query: 417 AITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVET----LKE----LKTVMASCGVWHT 467
A++ G L +G G LG G PR + L E +K + SCG +HT
Sbjct: 180 ALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCGEYHT 239
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH-----GDAEPRVVPLCVKVSDDISFC 522
AA+ + AG+ ++TWG G+ GQLGH GD E ++P V D +S
Sbjct: 240 AALSD-AGE-----------VYTWGLGSMGQLGHVSLQSGDKE--LIPRRVVGLDGVSMK 285
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG------NIKHRYIED- 575
+VACG T AL+ G +++ G GQLG +G F + G N+ I
Sbjct: 286 EVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLVIPTD 345
Query: 576 ---IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
+ACG H V + + WG + GQ + + P+ V+ QV+ + G
Sbjct: 346 VRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVG-QVRKLAAGG 404
Query: 633 NFTAAI 638
+A +
Sbjct: 405 GHSAVL 410
Score = 287 (106.1 bits), Expect = 3.1e-22, P = 3.1e-22
Identities = 93/325 (28%), Positives = 140/325 (43%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSY------PKLIDALNGSNIHM--VACGEFH 359
+V + + I+ WG G+ G + + P+L G+N ++CG H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T AV G L+ WG + G LG +E+ P+KV Q++ + + CG + TAAI
Sbjct: 73 TAAVASDGSLFAWG--ANEYGQLGDGTEVGRKHPKKVK-QLQSEFVKFVSCGAFCTAAIA 129
Query: 420 SAGKLFTFGDGTFGALG---HGDRSSTSVPREVETLKELKTVM--ASCGVWHTAAIVEVA 474
+ DGT G +++PR T + SCG H A+ E
Sbjct: 130 EPRE----NDGTLSTSRLWVWGQNQGSNLPRLFSGAFPATTAIRQVSCGTAHVVALSE-- 183
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAE----PRVVPLCVKVSDD----ISFCKVA 525
GL L WG +GQLG G E PRV+ K D+ + +++
Sbjct: 184 ------EGL----LQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLS 233
Query: 526 CGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
CG T AL+ G+V++ G GQLG G P R+ G + ++++ACG
Sbjct: 234 CGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVG-LDGVSMKEVACGGV 292
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHG 606
H +S + +Y WG G GQLG G
Sbjct: 293 HTCALSLEGALYAWGGGQAGQLGLG 317
Score = 283 (104.7 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 93/295 (31%), Positives = 137/295 (46%)
Query: 369 LYTWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISS------ICCGPWHTAAITSA 421
+Y WG + G G+ E IP+++ ++ G + I CG HTAA+ S
Sbjct: 22 IYVWG--YNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREHTAAVASD 79
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G LF +G +G LG G P++V+ L+ SCG + TAAI E + G+
Sbjct: 80 GSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFCTAAIAEPR-ENDGT- 137
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
LS+ +L+ WG L PR+ + I +V+CG + +AL+ G +
Sbjct: 138 -LSTSRLWVWGQNQGSNL------PRLFSGAFPATTAIR--QVSCGTAHVVALSEEGLLQ 188
Query: 542 SMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIED---------IACGSYHIAVVSSKS 590
+ G + GQLG G T G R+ N +++++ ++CG YH A +S
Sbjct: 189 AWGYNEQGQLGR-GVTCEGLQAPRVI-NAYAKFLDEAPELVKIMQLSCGEYHTAALSDAG 246
Query: 591 EVYTWGKGANGQLGH-----GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
EVYTWG G+ GQLGH GD E P V L +K V CG T A+ L
Sbjct: 247 EVYTWGLGSMGQLGHVSLQSGDKE--LIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Score = 246 (91.7 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 55/155 (35%), Positives = 94/155 (60%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA----LNGS----N 349
+ ++CG+ H V ++++G + +WG G+LG GV + + P++I+A L+ +
Sbjct: 169 RQVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVK 228
Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS---HWIPRKVSGQMEGLQIS 406
I ++CGE+HT A++ +G++YTWG G ++G LG VS S IPR+V G ++G+ +
Sbjct: 229 IMQLSCGEYHTAALSDAGEVYTWGLG--SMGQLGHVSLQSGDKELIPRRVVG-LDGVSMK 285
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
+ CG HT A++ G L+ +G G G LG G +S
Sbjct: 286 EVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQS 320
Score = 208 (78.3 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 55/193 (28%), Positives = 96/193 (49%)
Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEA-DVSY-PKLIDALNG 347
E+ ++ ++CG H ++ G++++WG GS G+LGH +++ D P+ + L+G
Sbjct: 222 EAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDG 281
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQ------VSEISHWIPRKVSGQM 400
++ VACG HTCA++L G LY WG G LGL Q VS S + R V +
Sbjct: 282 VSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLV 341
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVM 459
+ + CG HT G++ +G ++G + S P V+ + +++ +
Sbjct: 342 IPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVRKLA 401
Query: 460 ASCGVWHTAAIVE 472
A G H+A + +
Sbjct: 402 AGGG--HSAVLTD 412
Score = 132 (51.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 40/159 (25%), Positives = 70/159 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA- 334
+ S D+ L+P+ + + + +ACG H ++ +G +++WG G G+LG G ++
Sbjct: 264 LQSGDKE--LIPRRVVGLDGVSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSG 321
Query: 335 ---DVSYPKLIDALN------GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
VS + N +++ +VACG HT G + WG ++ G
Sbjct: 322 FFFSVSNGSEMLLRNVPVLVIPTDVRLVACGHSHTLVYMREGRICGWG--YNSYGQAANE 379
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
W P V + G Q+ + G H+A +T A L
Sbjct: 380 KSSYAWYPSPVDWCV-G-QVRKLAAGGGHSAVLTDAFSL 416
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 326 (119.8 bits), Expect = 6.1e-26, P = 6.1e-26
Identities = 100/344 (29%), Positives = 161/344 (46%)
Query: 301 IACGSKHAVLVTKQGQIFSW-----GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMV 353
+A G VT+ G++ W G G G L VE + ++ +G I V
Sbjct: 337 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHV 396
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
ACG+F T +T G + T+G G + LG G +++IS P V + G ++ + CG
Sbjct: 397 ACGDFFTACLTDRGIIMTFGSGSNGCLGH-GSLTDISQ--PTIVEALL-GYEMVQVACGA 452
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A+++ +LF +G G G LG G R S S P++V + CG+ ++ I+
Sbjct: 453 SHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSMILT 511
Query: 473 VAGKT--SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV--VPLCVKVSDDISFCKVACGH 528
V G+ GSN + L G E + H E + L D + G
Sbjct: 512 VPGQALACGSNRFNKLGLDHLSLGEE-PVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGT 570
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ + A+TA+G ++ GS +GQLG+ G + P +++G ++ + +ACG +
Sbjct: 571 AHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIG 629
Query: 588 SKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
++SEVY+WGKGA G+LG D + P ++ V SV C
Sbjct: 630 AESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673
Score = 317 (116.6 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 99/320 (30%), Positives = 143/320 (44%)
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW-----GDGIHNLGLLGQVSEIS-HWI 392
P + LN + + VA G VT SG L W G G +L L G V + +I
Sbjct: 324 PLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGSL-LPGAVEQPQPQFI 381
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
R + GQ G+ I + CG + TA +T G + TFG G+ G LGHG + S P VE L
Sbjct: 382 SRFLEGQ-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL 440
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
+ V +CG H A+ + ++LF WG G G+LG G E P
Sbjct: 441 LGYEMVQVACGASHVLALS------------TERELFAWGRGDSGRLGLGTRESHSCPQQ 488
Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPT---RIE--- 565
V + +V CG ++ LT GQ + GS + +LG S G+ P ++E
Sbjct: 489 VPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEAL 548
Query: 566 -----GN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
G+ + + I G+ H A V++ + YT+G +GQLG + P V+
Sbjct: 549 SFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQ 608
Query: 619 ALRDKQVKSVVCGSNFTAAI 638
L ++ V CG FT AI
Sbjct: 609 GLEGIKMAMVACGDAFTVAI 628
Score = 315 (115.9 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 88/312 (28%), Positives = 141/312 (45%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+ + LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL
Sbjct: 381 ISRFLEGQSGVTIKHVACGDFFTACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEAL 440
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + VACG H A++ +L+ WG G + G LG + SH P++V G +
Sbjct: 441 LGYEMVQVACGASHVLALSTERELFAWGRG--DSGRLGLGTRESHSCPQQVP-MPPGQEA 497
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALG--HGDRSSTSVP-REVETLKELKTVMASC 462
+ CG + +T G+ G F LG H VP ++VE T++ S
Sbjct: 498 QRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSF-TLLGSA 556
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
+ + G + +S +T+G GQLG P V+ + I
Sbjct: 557 PLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMA 616
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--G 579
VACG + T+A+ A +V+S G G+LG P ++ + H Y + ++C G
Sbjct: 617 MVACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHG 676
Query: 580 SYHIAVVSSKSE 591
+ +AV S E
Sbjct: 677 NTLLAVRSVTDE 688
Score = 258 (95.9 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 74/264 (28%), Positives = 122/264 (46%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ + ++F+WG G G+LG G S P+ +
Sbjct: 430 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQV 489
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL----LGQVSEISHWIPRKVS 397
G V CG + +T+ G G N LGL LG+ + +S
Sbjct: 490 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALS 549
Query: 398 GQMEGLQ------ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
+ G + SI G H+AA+T++G +TFG G LG R + P +V+
Sbjct: 550 FTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG 609
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---PRV 508
L+ +K M +CG T AI G S+ +++WG GA G+LG D + PR
Sbjct: 610 LEGIKMAMVACGDAFTVAI-----------GAESE-VYSWGKGARGRLGRRDEDAGLPR- 656
Query: 509 VPLCVKVSDDISFCKVACGHSITI 532
P+ + + + V+C H T+
Sbjct: 657 -PVQLDETHPYTVTSVSCCHGNTL 679
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 325 (119.5 bits), Expect = 7.8e-26, P = 7.8e-26
Identities = 104/355 (29%), Positives = 156/355 (43%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
GS + I++WG G ++ P + LN + + V+ G V
Sbjct: 307 GSARTGIPPPLSSIYTWGSG------------ITTPLRLPMLN-TEVVQVSAGRTQKAGV 353
Query: 364 TLSGDLYTW-GDGIHNLG---LLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T SG L W + G L G ++ ++ R + GQ G+ I + CG TA +
Sbjct: 354 TKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQ-SGVTIKHVSCGDLFTACL 412
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T G + TFG G+ G LGHG+ + S P+ VE L + V +CG H A+
Sbjct: 413 TDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAV-------- 464
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
SN +++F WG G G+LG G E P V V + +V CG ++ LT
Sbjct: 465 -SN---EREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNN 520
Query: 539 QVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYI-----------EDIAC---GSYHI 583
Q+ + GS +LG S+ + P+ E ++ + E + C G+ H
Sbjct: 521 QILACGSNRCNKLGLDRISSAEEPSP-EDQVEEATVFTCAQSAPLNQEPVVCADIGTAHS 579
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
A V++ + YT+G +GQLG N + P LV LR +V V CG FT AI
Sbjct: 580 AAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAI 634
Score = 288 (106.4 bits), Expect = 8.8e-22, P = 8.8e-22
Identities = 93/345 (26%), Positives = 155/345 (44%)
Query: 301 IACGSKHAVLVTKQGQIFSW-----GEGSGGKL-GHGVEADVSY-PKLIDALNGSNIHMV 353
++ G VTK G++ W G G L G + + + ++ +G I V
Sbjct: 343 VSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHV 402
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
+CG+ T +T G + T+G G + LG G +++S P+ V + G ++ + CG
Sbjct: 403 SCGDLFTACLTDRGIIMTFGSGSNGCLGH-GNFTDVSQ--PKIVEALL-GYEMVQVACGA 458
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A+++ ++F +G G G LG G + P++V E + CG+ ++ ++
Sbjct: 459 SHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGI-DSSMVLT 517
Query: 473 VAGK--TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC---G 527
V + GSN + L AE E V C + S ++ V C G
Sbjct: 518 VNNQILACGSNRCNKLGLDRISS-AEEPSPEDQVEEATVFTCAQ-SAPLNQEPVVCADIG 575
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
+ + A+TA+GQ ++ GS +GQLG+ + P + G ++ + +ACG +
Sbjct: 576 TAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVG-LRAMKVTVVACGDAFTVAI 634
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVC 630
+ EV TWGKGA G+LG D E P +E V SV C
Sbjct: 635 GADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVAC 679
Score = 286 (105.7 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 84/303 (27%), Positives = 135/303 (44%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + ++CG +T +G I ++G GS G LGHG DVS PK+++AL G
Sbjct: 389 RFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLG 448
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H AV+ +++ WG G + G LG + H P++V+ E +
Sbjct: 449 YEMVQVACGASHVLAVSNEREVFAWGRGDN--GRLGLGTLECHNSPQQVAVPPEH-EAQR 505
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK--TVMASCGVW 465
+ CG + +T ++ G LG SS P + ++E T S +
Sbjct: 506 VICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLN 565
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
+ G + +S + +T+G GQLG VP V + VA
Sbjct: 566 QEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVA 625
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI-EDIAC--GSYH 582
CG + T+A+ A G+V + G G+LG P ++ H Y+ +AC G+
Sbjct: 626 CGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYVVTSVACCHGNTL 685
Query: 583 IAV 585
+AV
Sbjct: 686 LAV 688
Score = 249 (92.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 74/265 (27%), Positives = 121/265 (45%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D PK++E+ + + +ACG+ H + V+ + ++F+WG G G+LG G + P+ +
Sbjct: 436 DVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQV 495
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRK------ 395
V CG + +T++ + G N LGL ++S P
Sbjct: 496 AVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKLGL-DRISSAEEPSPEDQVEEAT 554
Query: 396 --VSGQMEGLQISSICC---GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
Q L + C G H+AA+T++G+ +TFG G LG ++ VP V
Sbjct: 555 VFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNSRVPHLVV 614
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---PR 507
L+ +K + +CG T AI G++G ++ TWG GA G+LG D E PR
Sbjct: 615 GLRAMKVTVVACGDAFTVAI--------GADG----EVCTWGKGARGRLGRKDEETGMPR 662
Query: 508 VVPLCVKVSDDISFCKVACGHSITI 532
P+ ++ + VAC H T+
Sbjct: 663 --PVQLEETHPYVVTSVACCHGNTL 685
Score = 195 (73.7 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 52/193 (26%), Positives = 91/193 (47%)
Query: 470 IVEV-AGKTSGSNGLSSKKLFTWGDGAEGQLGH----GDAE---PRVVPLCVKVSDDISF 521
+V+V AG+T + S +L W G G G E P+ V ++ ++
Sbjct: 340 VVQVSAGRTQKAGVTKSGRLIMWEAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQSGVTI 399
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
V+CG T LT G + + GS G LG T P +E + + ++ +ACG+
Sbjct: 400 KHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLGYEMVQ-VACGA 458
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
H+ VS++ EV+ WG+G NG+LG G E +P V + + + V+CG + + + +
Sbjct: 459 SHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTV 518
Query: 641 HKGVSIADHSICS 653
+ + + C+
Sbjct: 519 NNQILACGSNRCN 531
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 328 (120.5 bits), Expect = 8.0e-26, Sum P(2) = 8.0e-26
Identities = 102/339 (30%), Positives = 164/339 (48%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
++CG +H +VT +++ +G + G+LG G +A + P I AL + + ACG HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
T +G +Y G +N G LG ++ I + G +AA+T
Sbjct: 100 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALTE 157
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
GKLF +GD + G +G D+S+ +P EV K + + SCG +H+A V + G+
Sbjct: 158 DGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSA-FVTMDGE---- 210
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
L+T+G+ G+LG + R + + + + +VACG T+ LT
Sbjct: 211 -------LYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV--IQVACGGGHTVVLTEK 261
Query: 538 GQVFSMGSADYGQLGSPG---STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
V++ G +GQLG T + P IE IK + I I+CG H A+++ +YT
Sbjct: 262 -VVYAFGLGQFGQLGLGTFLFETSE-PKIIE-RIKDQKICHISCGENHTALMTELGLLYT 318
Query: 595 WGKGANGQLGHG-DN-ENKQTPTLVEALRDKQVKSVVCG 631
+G G +G+LG G +N N+ PTL V+ + CG
Sbjct: 319 FGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 303 (111.7 bits), Expect = 4.4e-23, Sum P(2) = 4.4e-23
Identities = 89/290 (30%), Positives = 141/290 (48%)
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
++CG+ HT VT + LY +G +N G LG S+ + P + ++ ++ CG
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGS--NNWGQLGLGSKAAIIKPTCIKA-LKPEKVKLAACGR 96
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIV 471
HT T G ++ G G LG GD ++ T+ S G +AA+
Sbjct: 97 NHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTSAALT 156
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
E +G KLF WGD +EGQ+G D +P V V IS+ ++CG+ +
Sbjct: 157 E--------DG----KLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISW--ISCGYYHS 202
Query: 532 IALTATGQVFSMGSADYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+T G++++ G + G+LG P + P R+ G I R I+ +ACG H V++
Sbjct: 203 AFVTMDGELYTFGEPENGKLGLPNELLMNHRSPQRVLG-IPERVIQ-VACGGGHTVVLTE 260
Query: 589 KSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCGSNFTA 636
K VY +G G GQLG G E + P ++E ++D+++ + CG N TA
Sbjct: 261 KV-VYAFGLGQFGQLGLGTFLFETSE-PKIIERIKDQKICHISCGENHTA 308
Score = 284 (105.0 bits), Expect = 5.1e-21, Sum P(2) = 5.1e-21
Identities = 89/294 (30%), Positives = 150/294 (51%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D RD +++ T + ++ G+ + +T+ G++F WG+ S G++G +++
Sbjct: 121 LGDTDDRDTF-HQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSN 179
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI--SHWIP 393
V P + G I ++CG +H+ VT+ G+LYT+G+ N G LG +E+ +H P
Sbjct: 180 VCIPHEVTV--GKPISWISCGYYHSAFVTMDGELYTFGEP-EN-GKLGLPNELLMNHRSP 235
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETL 452
++V G E ++ + CG HT +T ++ FG G FG LG G TS P+ +E +
Sbjct: 236 QRVLGIPE--RVIQVACGGGHTVVLTEK-VVYAFGLGQFGQLGLGTFLFETSEPKIIERI 292
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG--DAEPRVVP 510
K+ K SCG HTA + E+ GL L+T+GDG G+LG G + + P
Sbjct: 293 KDQKICHISCGENHTALMTEL--------GL----LYTFGDGRHGKLGLGMENFTNQFFP 340
Query: 511 -LCVKVSDDISFCK--VACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKF 560
LC S+ + F +ACG + + AT ++ ++ + + P STG F
Sbjct: 341 TLC---SNFLRFAVQLIACG-GCHMLVFATPRLGTIDEPKFEDVYEPYISTGSF 390
Score = 273 (101.2 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 81/297 (27%), Positives = 144/297 (48%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
ACG H ++ T G +++ G + G+LG G D ++ +++ I ++ G +
Sbjct: 93 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 152
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A+T G L+ WGD ++ G +G + + IP +V+ G IS I CG +H+A +T
Sbjct: 153 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTM 207
Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
G+L+TFG+ G LG + + P+ V + E + + +CG HT + E
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 260
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSDDISFCKVACGHSITIA 533
K ++ +G G GQLG G +EP+++ ++ D C ++CG + T
Sbjct: 261 -------KVVYAFGLGQFGQLGLGTFLFETSEPKIIE---RIKDQ-KICHISCGENHTAL 309
Query: 534 LTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+T G +++ G +G+LG T +F + N ++ IACG H+ V ++
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 366
Score = 51 (23.0 bits), Expect = 8.0e-26, Sum P(2) = 8.0e-26
Identities = 27/94 (28%), Positives = 39/94 (41%)
Query: 782 ASPPGSRRVSRAP--SPISRKSSPACSI----TMNSFTDLANSEVI-FEYSKQTNDNFNQ 834
+SPP V+ P SP S P S MN T+ NS + E +TND N
Sbjct: 444 SSPPFHLSVNNYPEKSP-SESMEPLDSDYFEDKMNKDTETENSSAVDSENFGETNDILNM 502
Query: 835 EPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
+ + E L S + + + T K+ E+T
Sbjct: 503 THMMTTSSNEKLLDFSPIQKQQNQDTFEKVMEST 536
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 333 (122.3 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 106/346 (30%), Positives = 168/346 (48%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
++CG +H +VT +++ +G + G+LG G ++ VS P + AL + ACG HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 361 CAVTLSGDLYT-WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T G +Y G+ LGL G E S + +S +I + G +AA+T
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGL-GDTEERSTF--HLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+LF +GD + G +G + ++ VP++V K + + SCG +H+A + T G
Sbjct: 157 EDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TEG 209
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDA------EPRVVPLCVKVSDDISFCKVACGHSITIA 533
+L+T+G+ G+LG + P+ VP + + +VACG T+
Sbjct: 210 -------QLYTFGEPECGKLGLPNQLLVNHRMPQPVP---GIPGKV--VQVACGGGHTVV 257
Query: 534 LTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
LT V++ G +GQLG + P IE +IK + I IACG H A+++
Sbjct: 258 LTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIE-HIKDQKISFIACGENHTALITDMGL 315
Query: 592 VYTWGKGANGQLGHG-DNENKQ-TPTLVEALRDKQVKSVVCGSNFT 635
+YT+G G +G+LG G +N Q PTL V+ V CG T
Sbjct: 316 MYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHT 361
Score = 308 (113.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 90/291 (30%), Positives = 141/291 (48%)
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
++CG+ HT VT + LY +G +N G LG S+ + P V ++ ++ CG
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGS--NNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACGR 96
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAIV 471
HT T GK++ G G LG GD S + + K S G +AA+
Sbjct: 97 NHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALT 156
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
E +G +LF WGD +EGQ+G + VP V V IS+ ++CG+ +
Sbjct: 157 E--------DG----ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHS 202
Query: 532 IALTATGQVFSMGSADYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+T GQ+++ G + G+LG P + P + G I + ++ +ACG H V++
Sbjct: 203 AFVTTEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQ-VACGGGHTVVLTE 260
Query: 589 KSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
K+ VYT+G G GQLG G P +E ++D+++ + CG N TA I
Sbjct: 261 KA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310
Score = 294 (108.6 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
Identities = 81/249 (32%), Positives = 133/249 (53%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ ++ GS + +T+ G++F WG+ S G++G +V P+ + G I ++CG +
Sbjct: 143 KQLSAGSNTSAALTEDGELFMWGDNSEGQIGLENVTNVCVPQQVTV--GKPISWISCGYY 200
Query: 359 HTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ VT G LYT+G+ LGL Q+ ++H +P+ V G + G ++ + CG HT
Sbjct: 201 HSAFVTTEGQLYTFGEPECGKLGLPNQLL-VNHRMPQPVPG-IPG-KVVQVACGGGHTVV 257
Query: 418 ITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
+T ++TFG G FG LG G TSVP+ +E +K+ K +CG HTA I ++
Sbjct: 258 LTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIACGENHTALITDM--- 313
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHG--DAEPRVVP-LCVKVSDDISFCK--VACG--HS 529
GL ++T+GDG G+LG G ++ + +P LC S+ + F V+CG H+
Sbjct: 314 -----GL----MYTFGDGRHGKLGLGLENSTNQFIPTLC---SNFLRFIVQLVSCGGCHT 361
Query: 530 ITIALTATG 538
+ A G
Sbjct: 362 LVFATPRLG 370
Score = 285 (105.4 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 86/295 (29%), Positives = 148/295 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-IHMVACGEFHT 360
ACG H ++ T+ G++++ G + G+LG G + S LI I ++ G +
Sbjct: 93 ACGRNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTS 152
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A+T G+L+ WGD ++ G +G + + +P++V+ G IS I CG +H+A +T+
Sbjct: 153 AALTEDGELFMWGD--NSEGQIGLENVTNVCVPQQVT---VGKPISWISCGYYHSAFVTT 207
Query: 421 AGKLFTFGDGTFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
G+L+TFG+ G LG ++ + +P+ V + K V +CG HT + E
Sbjct: 208 EGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPG-KVVQVACGGGHTVVLTE------ 260
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVK-VSDD-ISFCKVACGHSITIALT 535
K ++T+G G GQLG G VP ++ + D ISF +ACG + T +T
Sbjct: 261 -------KAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISF--IACGENHTALIT 311
Query: 536 ATGQVFSMGSADYGQLGS--PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
G +++ G +G+LG ST +F + N ++ ++CG H V ++
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCHTLVFAT 366
Score = 42 (19.8 bits), Expect = 2.0e-25, Sum P(2) = 2.0e-25
Identities = 10/69 (14%), Positives = 29/69 (42%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEP 770
S+ G + + P + + + E + +R ++ + + P+ + + E
Sbjct: 632 SDGGQSQKDPEAEETVSEKENELAEMAGLQARRQSEENLRNINMFFDDLPNRDVNIEDEE 691
Query: 771 NSDFIKSNK 779
+ DF+K ++
Sbjct: 692 SKDFVKDSR 700
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 320 (117.7 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 99/344 (28%), Positives = 156/344 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSW-----GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMV 353
+A G VT+ G++ W G G G L +E + ++ +G I V
Sbjct: 345 VAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHV 404
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
ACG+ T +T G + T+G G + LG G +++IS P V + G ++ + CG
Sbjct: 405 ACGDLFTACLTDRGIIMTFGSGSNGCLGH-GSLNDISQ--PTIVEALL-GYEMVQVACGA 460
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A+++ +LF +G G G LG G R S P+ V + CG+ ++ I+
Sbjct: 461 SHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPGQEAQRVVCGI-DSSMILT 519
Query: 473 VAGKT--SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGH 528
V G+ GSN + L G E H E V PL D V G
Sbjct: 520 VPGQALACGSNRFNKLGLDPLSLGEE-PAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGP 578
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+ ++ LTA+G ++ GS +GQLG+ + P R++G ++ I +ACG +
Sbjct: 579 AHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQG-LQGIKISTVACGDAFTVAIG 637
Query: 588 SKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
++ EV++WGKGA G+LG D + P ++ V SV C
Sbjct: 638 AEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSC 681
Score = 313 (115.2 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 95/322 (29%), Positives = 144/322 (44%)
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD---GIHNLGLL-GQVSEIS-H 390
+S P + LN + + VA G VT SG L W G LL G + +
Sbjct: 329 LSAPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLGAGGGALLPGAIEQPQPQ 387
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
++ R + GQ G+ I + CG TA +T G + TFG G+ G LGHG + S P VE
Sbjct: 388 FVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVE 446
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L + V +CG H A+ + ++LF WG G G+LG G E P
Sbjct: 447 ALLGYEMVQVACGASHVLALS------------TERELFAWGRGDGGRLGLGTRESHCCP 494
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPT---RIE- 565
V + +V CG ++ LT GQ + GS + +LG P S G+ P ++E
Sbjct: 495 QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEE 554
Query: 566 -------GN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
G+ + + + G H ++++ + YT+G +GQLG + P
Sbjct: 555 AVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCR 614
Query: 617 VEALRDKQVKSVVCGSNFTAAI 638
V+ L+ ++ +V CG FT AI
Sbjct: 615 VQGLQGIKISTVACGDAFTVAI 636
Score = 303 (111.7 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 86/303 (28%), Positives = 134/303 (44%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL G
Sbjct: 391 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 450
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H A++ +L+ WG G + G LG + SH P+ V G +
Sbjct: 451 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHCCPQLVP-MPPGQEAQR 507
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV--MASCGVW 465
+ CG + +T G+ G F LG S P + ++E T + S +
Sbjct: 508 VVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLD 567
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
+ G +S +T+G GQLG P V+ I VA
Sbjct: 568 QEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQGLQGIKISTVA 627
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYH 582
CG + T+A+ A G+VFS G G+LG P ++ + H Y + ++C G+
Sbjct: 628 CGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSCCHGNTL 687
Query: 583 IAV 585
+AV
Sbjct: 688 LAV 690
Score = 263 (97.6 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 76/265 (28%), Positives = 123/265 (46%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ + ++F+WG G GG+LG G P+L+
Sbjct: 438 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLV 497
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL----LG-------QVSEISH 390
G V CG + +T+ G G N LGL LG QV E
Sbjct: 498 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVT 557
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
+ P S ++ + S+ GP H+ +T++G +TFG G LG R + P V+
Sbjct: 558 FTPLG-SAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQHGQLGTNARRVSRAPCRVQ 616
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---PR 507
L+ +K +CG T AI G+ G ++F+WG GA G+LG D + PR
Sbjct: 617 GLQGIKISTVACGDAFTVAI--------GAEG----EVFSWGKGARGRLGRKDEDAGLPR 664
Query: 508 VVPLCVKVSDDISFCKVACGHSITI 532
P+ + + + V+C H T+
Sbjct: 665 --PVQLDETHPYTVTSVSCCHGNTL 687
Score = 181 (68.8 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 56/184 (30%), Positives = 89/184 (48%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG----------- 329
R P+++ +AQ + CG ++++T GQ + G KLG
Sbjct: 488 RESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPA 547
Query: 330 -HG-VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS 386
H VE V++ L A L+ + V G H+ +T SGD YT+G H G LG +
Sbjct: 548 PHQQVEEAVTFTPLGSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQH--GQLGTNA 605
Query: 387 EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
P +V G ++G++IS++ CG T AI + G++F++G G G LG D + +P
Sbjct: 606 RRVSRAPCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDA-GLP 663
Query: 447 REVE 450
R V+
Sbjct: 664 RPVQ 667
Score = 135 (52.6 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 48/164 (29%), Positives = 78/164 (47%)
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
LSS ++TWG G L R+ L +V +VA G + +T +G++
Sbjct: 319 LSS--VYTWGGGLSAPL-------RLPMLNTEV------VQVAAGRTQKAGVTRSGRLIL 363
Query: 543 MGSADYGQLGS---PGSTGK----FPTR-IEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
+ G G PG+ + F +R +EG I+ +ACG A ++ + + T
Sbjct: 364 WEAPPLGAGGGALLPGAIEQPQPQFVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMT 422
Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+G G+NG LGHG + PT+VEAL ++ V CG++ A+
Sbjct: 423 FGSGSNGCLGHGSLNDISQPTIVEALLGYEMVQVACGASHVLAL 466
Score = 41 (19.5 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 777 SNKISASPPGSRRVSRAPSPIS-----RKSSPACSITMNSFTDLANSE-VIFEYSK 826
SN+ +RRVSRAP + + S+ AC ++FT +E +F + K
Sbjct: 595 SNQHGQLGTNARRVSRAPCRVQGLQGIKISTVACG---DAFTVAIGAEGEVFSWGK 647
Score = 38 (18.4 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 11/43 (25%), Positives = 14/43 (32%)
Query: 339 PKLIDALNGSNIHMVAC-----GEFHTCAVTLSGDLYTWGDGI 376
P L+ GS C G +YTWG G+
Sbjct: 287 PPLVPGSTGSRTSSARCRGVPRGPARPAIPPPLSSVYTWGGGL 329
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 317 (116.6 bits), Expect = 6.1e-25, P = 6.1e-25
Identities = 87/305 (28%), Positives = 149/305 (48%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
+ + LE + +S++CG +T +G I ++G GS G LGHG DV+ PK+++AL
Sbjct: 388 ISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEAL 447
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G + V+CG H AVT ++++WG G + G LG ++ SH P++VS + +
Sbjct: 448 LGYELVQVSCGASHVLAVTNEREVFSWGRGDN--GRLGLATQDSHNCPQQVSLPAD-FEA 504
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGV 464
+ CG + +++ ++ G+ F LG S T P ++E+ +
Sbjct: 505 QRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSAP 564
Query: 465 WHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
+T IV + T+ S ++ K + FT+G GQLG VP V I+
Sbjct: 565 LNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGLQGITMA- 623
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GS 580
ACG + T+A+ A G+V++ G G+LG P ++ + H + + +AC G+
Sbjct: 624 -ACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVACCHGN 682
Query: 581 YHIAV 585
+AV
Sbjct: 683 TLLAV 687
Score = 290 (107.1 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 89/321 (27%), Positives = 143/321 (44%)
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW---GDGIHNLGLLGQVSEIS-HW 391
+S P + LN + + V+ G VT SG L TW G L G V ++ +
Sbjct: 329 ISTPLRLPMLN-TEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQF 387
Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
I R + GQ G+ I S+ CG T +T G + TFG G+ G LGHG+ + + P+ VE
Sbjct: 388 ISRFLEGQ-SGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDVTQPKIVEA 446
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
L + V SCG H A+ + +++F+WG G G+LG + P
Sbjct: 447 LLGYELVQVSCGASHVLAVT------------NEREVFSWGRGDNGRLGLATQDSHNCPQ 494
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPT---RIE-- 565
V + D +V CG ++ ++ Q+ + G+ + +LG +G + P+ ++E
Sbjct: 495 QVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEV 554
Query: 566 --------GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
+ I I G+ H V+ K + +T+G +GQLG + + P V
Sbjct: 555 HLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQV 614
Query: 618 EALRDKQVKSVVCGSNFTAAI 638
L+ + CG FT AI
Sbjct: 615 SGLQG--ITMAACGDAFTLAI 633
Score = 274 (101.5 bits), Expect = 3.1e-20, P = 3.1e-20
Identities = 90/345 (26%), Positives = 156/345 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSW---GEGSGGKLGHGVEADVS---YPKLIDALNGSNIHMVA 354
++ G + VTK G++ +W GSG G + + ++ +G I V+
Sbjct: 345 VSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVS 404
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
CG+ T +T G + T+G G + LG G ++++ P+ V + G ++ + CG
Sbjct: 405 CGDLFTTCLTDRGIIMTFGSGSNGCLGH-GNFNDVTQ--PKIVEALL-GYELVQVSCGAS 460
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H A+T+ ++F++G G G LG + S + P++V + + CGV + I+
Sbjct: 461 HVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGV-DCSMIMST 519
Query: 474 AGK--TSGSNGLSSKKLFTWGDGAEGQLGHGDAEP----RVVPLCVKVSDDISFCKVACG 527
+ G+N + L G E E ++V ++ I + +
Sbjct: 520 QHQILACGNNRFNKLGLDKVS-GTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTA 578
Query: 528 HSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
HS+ A+T GQ F+ GS +GQLG S + + P ++ G + I ACG +
Sbjct: 579 HSV--AVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVSGL---QGITMAACGDAFTLAI 633
Query: 587 SSKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
++ EVYTWGKGA G+LG + + P ++ V SV C
Sbjct: 634 GAEGEVYTWGKGARGRLGRKEEDFGIPKPVQLDESHAFTVTSVAC 678
Score = 254 (94.5 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 78/264 (29%), Positives = 123/264 (46%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D PK++E+ + + ++CG+ H + VT + ++FSWG G G+LG + + P+ +
Sbjct: 437 DVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQV 496
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL---LG--------QVSEISH 390
V CG + ++ + G+ N LGL G QV E+ H
Sbjct: 497 SLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEV-H 555
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
S + +I I G H+ A+T G+ FTFG G LG R S+ VP +V
Sbjct: 556 LFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQLGCSHRRSSRVPYQVS 615
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L+ + MA+CG T AI G+ G +++TWG GA G+LG + E +P
Sbjct: 616 GLQGI--TMAACGDAFTLAI--------GAEG----EVYTWGKGARGRLGRKE-EDFGIP 660
Query: 511 LCVKVSDDISFC--KVACGHSITI 532
V++ + +F VAC H T+
Sbjct: 661 KPVQLDESHAFTVTSVACCHGNTL 684
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 37/147 (25%), Positives = 74/147 (50%)
Query: 500 GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG- 558
G G + P +P+ ++ ++ +V+ G + + +T +G++ + + G G P G
Sbjct: 326 GSGISTPLRLPM---LNTEV--IQVSLGRTQKMGVTKSGRLITWEAPSVGS-GEPTLPGA 379
Query: 559 ------KFPTR-IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
+F +R +EG I+ ++CG ++ + + T+G G+NG LGHG+ +
Sbjct: 380 VEQMQPQFISRFLEGQ-SGVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGHGNFNDV 438
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P +VEAL ++ V CG++ A+
Sbjct: 439 TQPKIVEALLGYELVQVSCGASHVLAV 465
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 312 (114.9 bits), Expect = 8.5e-25, P = 8.5e-25
Identities = 86/303 (28%), Positives = 143/303 (47%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ T ++F +G LG G PK ++AL G I ++ G H
Sbjct: 31 ANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLC 90
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G++Y WG HN LG + P +V + ++ + CG H+ A++ G
Sbjct: 91 TEDGEVYAWG---HNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDG 147
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSN 481
L+ +G G +G G ++ PR V + K V+ +CG + A+V +N
Sbjct: 148 DLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVV--------NN 199
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
G +++ WG GQLG G+ ++ P V + ++ACG++ T+ALT G ++
Sbjct: 200 G----EVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYAHTLALTDEGLLY 255
Query: 542 SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGA 599
+ G+ YGQLG+ + + P +I K R +E AC S H + ++S +VY WG+
Sbjct: 256 AWGANTYGQLGTGNKSNQLSPLQIMME-KERVVEIAACHSAHTSAAKTQSGQVYMWGQ-C 313
Query: 600 NGQ 602
GQ
Sbjct: 314 RGQ 316
Score = 304 (112.1 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 78/273 (28%), Positives = 134/273 (49%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGV-E 333
+ + D + ++PK LE+ S++ GS H +L T+ G++++WG +LG+G
Sbjct: 54 LGTGDSQSTIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATN 113
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
V+ ++ L + VACG H+ A++ GDLY WG +N G +G S + P
Sbjct: 114 QGVTPVQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWG--YNNCGQVGSGSTANQPTP 171
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
R+VS ++ + I CG + A+ + G+++ +G G LG G+ + P V L
Sbjct: 172 RRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALH 231
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + +CG HT A+ + GL L+ WG GQLG G+ ++ PL +
Sbjct: 232 GVCILQIACGYAHTLALTD--------EGL----LYAWGANTYGQLGTGNKSNQLSPLQI 279
Query: 514 KVSDDISFCKVACGHSI--TIALTATGQVFSMG 544
+ + ++A HS + A T +GQV+ G
Sbjct: 280 MMEKE-RVVEIAACHSAHTSAAKTQSGQVYMWG 311
Score = 238 (88.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 78/277 (28%), Positives = 126/277 (45%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFGDGTFG 433
G++ LG S +P+K+ + G +ISS+ G H T G+++ +G +
Sbjct: 47 GLNCSNCLGTGDSQSTIVPKKLEA-LCGKKISSLSYGSGPHVLLCTEDGEVYAWGHNGYS 105
Query: 434 ALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
LG+G + P +V T LK V+ +CG H+ A+ +G L+ WG
Sbjct: 106 QLGNGATNQGVTPVQVCTNLLLKKVIEVACGSHHSMAL--------SFDG----DLYAWG 153
Query: 493 DGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
GQ+G G PR V C++ D +ACG + ++A+ G+V+ G
Sbjct: 154 YNNCGQVGSGSTANQPTPRRVSNCLQ---DKMVVGIACGQTSSMAVVNNGEVYGWGYNGN 210
Query: 549 GQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
GQLG G+ G P R+ + I IACG H ++ + +Y WG GQLG G
Sbjct: 211 GQLGL-GNNGNQLTPCRVAA-LHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTG 268
Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ N+ +P + +++ V+ C S T+A G
Sbjct: 269 NKSNQLSPLQIMMEKERVVEIAACHSAHTSAAKTQSG 305
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 318 (117.0 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 85/252 (33%), Positives = 132/252 (52%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALN 346
K LE+ V+ IACG +H++ +T GQ+F WGE + G+LG E A P+ + +L
Sbjct: 113 KGLENRQVIQ---IACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLC 169
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
G + ++ G H+ ++LSG ++ WG ++ G LG ++P V+ ++ +I
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGG--NSAGQLGLGDTTDRFVPTVVNS-LKRKKIV 226
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
SI CG HTAA+ G +FTFG G FG LGH PR V L K +CG H
Sbjct: 227 SISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNH 286
Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV----KVSDDISFC 522
T +V A S K ++++G G +GQLG+G+ + VPL V + +D+ +
Sbjct: 287 T--LVSTA---------SPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQ 335
Query: 523 KVACGHSITIAL 534
K+ G + + AL
Sbjct: 336 KLVAGENHSFAL 347
Score = 285 (105.4 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 74/245 (30%), Positives = 115/245 (46%)
Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTV 458
+E Q+ I CG H+ A+T+ G+LF +G+ G LG +++ T PR +++L
Sbjct: 115 LENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSL------ 168
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
CG+ A + G S LS +F WG + GQLG GD R VP V
Sbjct: 169 ---CGI--PVAQISAGGNHSFVLSLSGV-VFGWGGNSAGQLGLGDTTDRFVPTVVNSLKR 222
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
++CG T AL G VF+ GS +GQLG + R+ + + + C
Sbjct: 223 KKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKVSQVTC 282
Query: 579 GSYHIAV-VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA---LRDKQ-VKSVVCGSN 633
G H V +S +Y++G G GQLG+G+ + P V+ D+ ++ +V G N
Sbjct: 283 GRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGEN 342
Query: 634 FTAAI 638
+ A+
Sbjct: 343 HSFAL 347
Score = 249 (92.7 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 68/214 (31%), Positives = 105/214 (49%)
Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG-QVSEISHWIPRKVSGQM 400
+ L + +ACG+ H+ A+T G L+ WG+ LG LG + + PR + +
Sbjct: 112 LKGLENRQVIQIACGDQHSMALTNDGQLFVWGENA--LGQLGLRKEQAGTQSPRHLQS-L 168
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
G+ ++ I G H+ ++ +G +F +G + G LG GD + VP V +LK K V
Sbjct: 169 CGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSI 228
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
SCG HTAA+ + G T +FT+G G GQLGH + P V
Sbjct: 229 SCGGEHTAALAK--GGT----------VFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSK 276
Query: 521 FCKVACGHSITIALTATGQ-VFSMGSADYGQLGS 553
+V CG + T+ TA+ + ++S G GQLG+
Sbjct: 277 VSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGN 310
Score = 243 (90.6 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 55/165 (33%), Positives = 89/165 (53%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ L+S + I+ G H+ +++ G +F WG S G+LG G D P ++++L
Sbjct: 162 PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLK 221
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
I ++CG HT A+ G ++T+G G G LG S PR V+ ++ G ++S
Sbjct: 222 RKKIVSISCGGEHTAALAKGGTVFTFGSG--GFGQLGHNSFKDEHHPRLVA-ELWGSKVS 278
Query: 407 SICCGPWHTAAITSAGKL-FTFGDGTFGALGHGDRSSTSVPREVE 450
+ CG HT T++ KL ++FG G G LG+G++ SVP V+
Sbjct: 279 QVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVD 323
Score = 227 (85.0 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 62/203 (30%), Positives = 99/203 (48%)
Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
D+S+ P ++ L+ + + +CG H+ A+ ++G +LF WG+ A GQ
Sbjct: 104 DKSTECSP--LKGLENRQVIQIACGDQHSMALT--------NDG----QLFVWGENALGQ 149
Query: 499 LG-----HGDAEPR-VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
LG G PR + LC I +++ G + + L+ +G VF G GQLG
Sbjct: 150 LGLRKEQAGTQSPRHLQSLC-----GIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLG 204
Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
+T +F + ++K + I I+CG H A ++ V+T+G G GQLGH +++
Sbjct: 205 LGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEH 264
Query: 613 TPTLVEALRDKQVKSVVCGSNFT 635
P LV L +V V CG N T
Sbjct: 265 HPRLVAELWGSKVSQVTCGRNHT 287
Score = 184 (69.8 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 46/143 (32%), Positives = 68/143 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P V+ S SI+CG +H + K G +F++G G G+LGH D +P
Sbjct: 207 DTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHP 266
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+L+ L GS + V CG HT T S L Y++G G+ G LG ++ +P V
Sbjct: 267 RLVAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQ--GQLGNGEQVKQSVPLPVDQ 324
Query: 399 QME---GLQISSICCGPWHTAAI 418
E I + G H+ A+
Sbjct: 325 PTEYNDEYTIQKLVAGENHSFAL 347
Score = 125 (49.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 43/145 (29%), Positives = 73/145 (50%)
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
L + I ++ CGE+ AV L DG L ++ + +E S P K G +E Q
Sbjct: 76 LKKNTIRLIVCGEYG--AVLLD-------DGGKVL-IMDKSTECS---PLK--G-LENRQ 119
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCG 463
+ I CG H+ A+T+ G+LF +G+ G LG +++ T PR +++L + S G
Sbjct: 120 VIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQSLCGIPVAQISAG 179
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKL 488
H+ ++ ++G G G S+ +L
Sbjct: 180 GNHSF-VLSLSGVVFGWGGNSAGQL 203
Score = 76 (31.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 30/122 (24%), Positives = 54/122 (44%)
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCV----KVSDDISFCKVACGHSITIALTATGQ 539
S K ++++G G +GQLG+G+ + VPL V + +D+ + K+ G + + AL
Sbjct: 293 SPKLIYSFGCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFALY---- 348
Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
+ +LG+ + PTR + IE CG + +V++
Sbjct: 349 --------FKELGNEANPD--PTRGIMTFDNGMIEQCECGKDPRKAIKDLKKVFSSAASL 398
Query: 600 NG 601
NG
Sbjct: 399 NG 400
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 330 (121.2 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 73/217 (33%), Positives = 118/217 (54%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
I CG H++ ++K G++F+WG+ G+LG G + + P++++ L G + ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
+ A+++SG++Y+WG + G LG S P + G ++ ++ + CG H+A +T
Sbjct: 203 SMALSMSGNIYSWGK--NECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G LFTFG G G LGH + P V L + +CG WHT A V GK
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLGK--- 316
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
+F++G G +GQLG+G +++PL VKVS
Sbjct: 317 --------VFSFGSGKDGQLGNGGTRDQLMPLPVKVS 345
Score = 274 (101.5 bits), Expect = 1.9e-18, Sum P(2) = 1.9e-18
Identities = 71/226 (31%), Positives = 117/226 (51%)
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASC 462
+I I CG +H+ A++ G+LF +G G LG G + ST+ P+ VE L + S
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
G H+ A+ SG+ +++WG GQLG G E + P ++ D+
Sbjct: 199 GEAHSMAL-----SMSGN-------IYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVE 246
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSY 581
VACG S + LT G +F+ G+ +GQLG + + P + + +R + IACG +
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYR-VTQIACGRW 305
Query: 582 H-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
H +A VS +V+++G G +GQLG+G ++ P V+ +++K
Sbjct: 306 HTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
Score = 265 (98.3 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 59/173 (34%), Positives = 94/173 (54%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+++E + I+ G H++ ++ G I+SWG+ G+LG G P LI+ L+
Sbjct: 182 PQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLD 241
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ VACG H+ +T G L+T+G G H G LG S + P V+ ++ G +++
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVT 298
Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPR--EVETLKELK 456
I CG WHT A ++ GK+F+FG G G LG+G +P +V + +ELK
Sbjct: 299 QIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELK 351
Score = 242 (90.2 bits), Expect = 5.5e-15, Sum P(2) = 5.5e-15
Identities = 60/188 (31%), Positives = 98/188 (52%)
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-P 510
L+E K + +CG +H+ A+ S G +LF WG GQLG G P P
Sbjct: 135 LQEKKIIQITCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTP 182
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIK 569
V+ + +++ G + ++AL+ +G ++S G + GQLG + K P+ IEG +
Sbjct: 183 QIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LD 241
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
++ +E +ACG H A+++ ++T+G G +GQLGH +N+ P LV L +V +
Sbjct: 242 NQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIA 301
Query: 630 CGSNFTAA 637
CG T A
Sbjct: 302 CGRWHTLA 309
Score = 179 (68.1 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 43/189 (22%), Positives = 87/189 (46%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
A PK ++ + S+ G++H ++++ G+ F + S + + +
Sbjct: 85 ARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS-----------MKHLRFES 133
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
L I + CG++H+ A++ G+L+ WG +H G LG + ++ + G+
Sbjct: 134 ILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLAGV 191
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I G H+ A++ +G ++++G G LG G S P +E L K +CG
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACG 251
Query: 464 VWHTAAIVE 472
H+A + +
Sbjct: 252 GSHSALLTQ 260
Score = 178 (67.7 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 41/120 (34%), Positives = 67/120 (55%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI-KHRY---IEDIAC 578
++ CG ++AL+ G++F+ G +GQLG G KFP+ I +H + I+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV-GR--KFPSTTTPQIVEHLAGVPLAQISA 198
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G H +S +Y+WGK GQLG G E+K P+L+E L +++V+ V CG + +A +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
Score = 37 (18.1 bits), Expect = 1.5e-24, Sum P(2) = 1.5e-24
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 697 YRVCDDCFIKL 707
Y++CD+ IKL
Sbjct: 889 YKMCDEDIIKL 899
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 316 (116.3 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 82/253 (32%), Positives = 130/253 (51%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALN 346
K L++T V+ IACG +H+V ++ GQ+F WGE + G+LG E A + P+ + +L
Sbjct: 113 KGLDNTKVIQ---IACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSLC 169
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
G + ++ G H+ ++LSG ++ WG ++ G LG ++P V + G +
Sbjct: 170 GIPVAQISAGGNHSFVLSLSGVVFGWGS--NSAGQLGLGDTTDRFVPTIVKS-LSGKKTV 226
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
SI CG HTA ++ G +FTFG G FG LGH PR V L K +CG H
Sbjct: 227 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHH 286
Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC---- 522
T +V + + +++++G G +GQLG+G+ + VPL V + D + C
Sbjct: 287 TLVLVAL-----------TNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTDCN-CEFTM 334
Query: 523 -KVACGHSITIAL 534
K+ G + AL
Sbjct: 335 EKIIAGEKHSFAL 347
Score = 266 (98.7 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 64/223 (28%), Positives = 108/223 (48%)
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETL 452
R + G ++ ++ I CG H+ A+++ G+LF +G+ G LG +++ P+ +++L
Sbjct: 110 RPLKG-LDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQSL 168
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
CG+ A + G S LS +F WG + GQLG GD R VP
Sbjct: 169 ---------CGI--PVAQISAGGNHSFVLSLSGV-VFGWGSNSAGQLGLGDTTDRFVPTI 216
Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
VK ++CG T L+ G VF+ GS +GQLG + R+ +
Sbjct: 217 VKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSK 276
Query: 573 IEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
+ + CG +H + +V+ + +Y++G G GQLG+G+ + P
Sbjct: 277 VSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVP 319
Score = 256 (95.2 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 79/257 (30%), Positives = 123/257 (47%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+SI CG AVL+ GGK+ + V P + L+ + + +ACG+
Sbjct: 82 RSIVCGEDGAVLLA-----------DGGKVLLMDKYTVCRP--LKGLDNTKVIQIACGDQ 128
Query: 359 HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A++ G L+ WG+ H LGL + + I P+ + + G+ ++ I G H+
Sbjct: 129 HSVALSNDGQLFVWGENAHGQLGLRKEQALIQS--PQHLQS-LCGIPVAQISAGGNHSFV 185
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
++ +G +F +G + G LG GD + VP V++L KTV SCG HTA + + G T
Sbjct: 186 LSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSK--GGT 243
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA- 536
+FT+G G GQLGH + P V +V CG T+ L A
Sbjct: 244 ----------VFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVAL 293
Query: 537 TGQVFSMGSADYGQLGS 553
T +++S G GQLG+
Sbjct: 294 TNRIYSFGCGMQGQLGN 310
Score = 240 (89.5 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 53/172 (30%), Positives = 91/172 (52%)
Query: 281 RRDALL--PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
+ AL+ P+ L+S + I+ G H+ +++ G +F WG S G+LG G D
Sbjct: 154 KEQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFV 213
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
P ++ +L+G ++CG HT ++ G ++T+G G G LG S PR V+
Sbjct: 214 PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSG--GFGQLGHNSLKDEHHPRLVA- 270
Query: 399 QMEGLQISSICCGPWHTAAITS-AGKLFTFGDGTFGALGHGDRSSTSVPREV 449
++ G ++S + CG HT + + ++++FG G G LG+G++ SVP V
Sbjct: 271 ELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPV 322
Score = 224 (83.9 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 59/196 (30%), Positives = 94/196 (47%)
Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
+V R ++ L K + +CG H+ A+ SN +LF WG+ A GQLG
Sbjct: 107 TVCRPLKGLDNTKVIQIACGDQHSVAL---------SN---DGQLFVWGENAHGQLGLRK 154
Query: 504 AEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT 562
+ + P ++ I +++ G + + L+ +G VF GS GQLG +T +F
Sbjct: 155 EQALIQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVP 214
Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
I ++ + I+CG H A +S V+T+G G GQLGH +++ P LV L
Sbjct: 215 TIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWG 274
Query: 623 KQVKSVVCGSNFTAAI 638
+V V CG + T +
Sbjct: 275 SKVSQVTCGRHHTLVL 290
Score = 187 (70.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 39/118 (33%), Positives = 63/118 (53%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +++S SI+CG +H ++K G +F++G G G+LGH D +P
Sbjct: 207 DTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHP 266
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
+L+ L GS + V CG HT V L+ +Y++G G+ G LG ++ +P V
Sbjct: 267 RLVAELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQ--GQLGNGEQVKQSVPLPV 322
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 186 (70.5 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 53/161 (32%), Positives = 78/161 (48%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G S ++ALTA QV+S GS
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 547 DYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACG-SYHIAVVSSKS---EVYTWGKG- 598
+GQLG +FPT R+ + +A G Y + +V ++ +Y G+
Sbjct: 581 TFGQLGH----SEFPTTVPRLSKVSSESGVWSVAAGHGYSLFLVDTEDFQPGLYYSGRQD 636
Query: 599 -ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
A G + TP L+ + + V G + A+
Sbjct: 637 RAEGDTLPENPSGTTTPVLLSCSKLGYISRVTAGKDSYLAL 677
Score = 186 (70.5 bits), Expect = 5.9e-24, Sum P(2) = 5.9e-24
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G KH VL+T+ G+++S+G K E S P L AL G ++ VA G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGT-LPWK-SEAAEICPSSPLLESALVGHHVVTVATGSFHSG 104
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ----MEGLQISSICCGPWHTAA 417
AVT SG +Y WG+ + +S P +S + ++I + CG HT A
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLACGEEHTLA 164
Query: 418 ITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
++ + +++ +G G LG + + P++VE L + +CG +H+ A+V+
Sbjct: 165 LSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 163 (62.4 bits), Expect = 1.5e-21, Sum P(2) = 1.5e-21
Identities = 43/138 (31%), Positives = 73/138 (52%)
Query: 289 VLESTVV-LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI---DA 344
+LES +V ++A GS H+ VT+ G ++ WGE + G+ + VS P + D+
Sbjct: 83 LLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDS 142
Query: 345 ----LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
L I +ACGE HT A+++S +++ WG G LGL+ ++ P+KV +
Sbjct: 143 ETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTTFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAI 418
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 137 (53.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 495 RVKTRTVVLTPTY--SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 552
Query: 348 SN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQ 399
IH+ A G H+ A+T +Y+WG + G LG SE +PR KVS +
Sbjct: 553 KEVIHLEAGGS-HSLALTAKSQVYSWGS--NTFGQLGH-SEFPTTVPRLSKVSSE 603
Score = 129 (50.5 bits), Expect = 0.00046, P = 0.00046
Identities = 47/165 (28%), Positives = 75/165 (45%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
G L L G +S++S + RK + + + ++ G + +++T+G G G
Sbjct: 472 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 531
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
LGHGD +PR L+ + C +E G S S L++K ++++WG
Sbjct: 532 QLGHGD----VLPR-------LQPLCVKCLDGKEVIHLEAGG--SHSLALTAKSQVYSWG 578
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
GQLGH + P VP KVS + VA GH ++ L T
Sbjct: 579 SNTFGQLGHSEF-PTTVPRLSKVSSESGVWSVAAGHGYSLFLVDT 622
Score = 120 (47.3 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 49/205 (23%), Positives = 89/205 (43%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P ++ G G + G H +T G++++FG T S P L
Sbjct: 32 PERLPG-WGGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWKSEAAEICPSSPLLESAL 88
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
V + G +H+ A+ E +G+ ++ WG+ A GQ + + P
Sbjct: 89 VGHHVVTVATGSFHSGAVTE--------SGV----VYMWGENAAGQCAVANQQYVSEPSP 136
Query: 513 VKVSDD-------ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
V +SD + ++ACG T+AL+ + ++++ G+ QLG +T FP
Sbjct: 137 VSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTT--FPVTKP 192
Query: 566 GNIKH---RYIEDIACGSYH-IAVV 586
++H R + +ACG++H +A+V
Sbjct: 193 QKVEHLAGRVVLQVACGAFHSLALV 217
Score = 109 (43.4 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S ++EV+TWGKG GQLGHGD + P V+ L K+V + G + + A+
Sbjct: 517 SLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 304 (112.1 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 86/303 (28%), Positives = 140/303 (46%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ VT ++F +G LG G PK ++AL G I ++ G H
Sbjct: 31 ANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLS 90
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G
Sbjct: 91 TEDGVVYAWG---HNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSN 481
++F +G G +G G ++ PR+V +K V+ +CG + A+++ N
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD--------N 199
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
G +++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G ++
Sbjct: 200 G----EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 542 SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGA 599
+ G+ YGQLG+ P I K R IE AC S H + ++ VY WG+
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVE-KERVIEIAACHSAHTSAAKTQGGHVYMWGQ-C 313
Query: 600 NGQ 602
GQ
Sbjct: 314 RGQ 316
Score = 288 (106.4 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 81/226 (35%), Positives = 113/226 (50%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
+T + ++F FG LG GD ST VP+++E L K++K++ G H E
Sbjct: 37 VTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTE--- 92
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIAL 534
+G+ ++ WG QLG+G + P+ V + I +VACG ++AL
Sbjct: 93 -----DGV----VYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKH-RYIEDIACGSYHIAVVSSKSEV 592
A G+VF+ G + GQ+GS GST PT R N H + + IACG V EV
Sbjct: 144 AADGEVFAWGYNNCGQVGS-GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
Y WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Score = 265 (98.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 75/273 (27%), Positives = 124/273 (45%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + D L+PK LE+ +S++ GS H +L T+ G +++WG +LG+G
Sbjct: 54 LGTGDNHSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 335 DVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
P ++ L + VACG H+ A+ G+++ WG +N G +G S + P
Sbjct: 114 QGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNCGQVGSGSTANQPTP 171
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
RKV+ + ++ I CG + A+ G+++ +G G LG G+ + P V L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ CG HT A+ + GL L+ WG GQLG G+ + P +
Sbjct: 232 SVCVNQIVCGYAHTLALTD--------EGL----LYAWGANTYGQLGTGNKNNLLSPAHI 279
Query: 514 KVSDDISFCKVACGHSI--TIALTATGQVFSMG 544
V + ++A HS + A T G V+ G
Sbjct: 280 MVEKE-RVIEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 256 (95.2 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 276 ISSADRRDALLP-KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + L P +V + ++ +ACGS H++ + G++F+WG + G++G G A
Sbjct: 107 LGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTA 166
Query: 335 DVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWI 392
+ P K+ + L+ + +ACG+ + AV +G++Y WG +G LGL ++++
Sbjct: 167 NQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT--- 223
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P +V+ + + ++ I CG HT A+T G L+ +G T+G LG G++++ P +
Sbjct: 224 PVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVE 282
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
KE +A+C HT+A KT G + ++ WG GQ
Sbjct: 283 KERVIEIAACHSAHTSA-----AKTQGGH------VYMWGQ-CRGQ 316
Score = 239 (89.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 74/282 (26%), Positives = 129/282 (45%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSA 421
VT S +++ +G ++ LG S +P+K+ + G +I S+ G H T
Sbjct: 37 VTDSDEVFVFG--LNYSSCLGTGDNHSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLSTED 93
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGS 480
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+ +
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALA--------A 145
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+G ++F WG GQ+G G PR V C+ + + +ACG + ++A+
Sbjct: 146 DG----EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVG---IACGQTSSMAVLD 198
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTW 595
G+V+ G GQLG G+ G T + H + I CG H ++ + +Y W
Sbjct: 199 NGEVYGWGYNGNGQLGL-GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G GQLG G+ N +P + +++ ++ C S T+A
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAACHSAHTSA 299
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 202 (76.2 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 45/114 (39%), Positives = 74/114 (64%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L A+ + G++HA+L+ + GQ+FSWG+G G+LGHG +EA+ P+L++AL G + VA
Sbjct: 95 LRARRLELGAEHALLLDEAGQVFSWGQGRHGQLGHGSLEAEPE-PRLLEALQGLPVAEVA 153
Query: 355 CGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQ-VSEISHWIPRKVSGQME-GLQI 405
G +H+ V+ +GD+Y WG + L L + ++E + IPR+ SG E G ++
Sbjct: 154 AGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNEDGFEV 207
Score = 139 (54.0 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 29/57 (50%), Positives = 35/57 (61%)
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCG 631
+CGS H AVV+ E+YTWG G GQLGH D + P VE DKQ V++V CG
Sbjct: 243 SCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCG 299
Score = 139 (54.0 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVM 459
G + CG HTA +T G+L+T+G G +G LGH D +S P VE K+L+
Sbjct: 236 GADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRA 295
Query: 460 ASCGVWHT 467
SCG W+T
Sbjct: 296 VSCGPWNT 303
Score = 137 (53.3 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
+P L+D G+++ +CG HT VT +G+LYTWG G + G LG S P +V
Sbjct: 227 FPALLDLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKY--GQLGHKDTTSLDRPCRVE 284
Query: 398 GQMEG-LQISSICCGPWHT 415
++ LQ+ ++ CGPW+T
Sbjct: 285 YFVDKQLQVRAVSCGPWNT 303
Score = 122 (48.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G H + +G +++WG G H G LG S + PR + ++GL ++ + G WH+
Sbjct: 103 GAEHALLLDEAGQVFSWGQGRH--GQLGHGSLEAEPEPRLLEA-LQGLPVAEVAAGGWHS 159
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRS----STSVPREVETLKE 454
++ G ++ +G G L RS + ++PRE L E
Sbjct: 160 VCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREASGLNE 202
Score = 116 (45.9 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 40/165 (24%), Positives = 70/165 (42%)
Query: 313 KQGQIFSWGE-GSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLSGD-- 368
++G F +G G G G G V P+ + +G+++ V+ +T VT
Sbjct: 5 RRGSWFGFGFCGFGQAPGSGRGRQVLSPEPLQTPGSGADVRRVSASWSYTALVTRERPPP 64
Query: 369 -LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
L G + G + PR ++ ++ ++ G H + AG++F++
Sbjct: 65 ALLRPGPRVP--GAKAPQPALRPPAPRALAPELRARRLE---LGAEHALLLDEAGQVFSW 119
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
G G G LGHG + PR +E L+ L + G WH+ + E
Sbjct: 120 GQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSE 164
Score = 115 (45.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++F+WG G GQLGHG E P ++ + +VA G ++ ++ TG ++ G
Sbjct: 115 QVFSWGQGRHGQLGHGSLEAEPEPRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWN 174
Query: 547 DYGQLGSP 554
+ GQL P
Sbjct: 175 ESGQLALP 182
Score = 99 (39.9 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNI-KHRYIEDIACGS 580
K +CG T +T TG++++ G YGQLG +T P R+E + K + ++CG
Sbjct: 241 KASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRAVSCGP 300
Query: 581 YHIAVVSSKSE 591
++ V + + E
Sbjct: 301 WNTYVYAVEKE 311
Score = 84 (34.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 23/77 (29%), Positives = 36/77 (46%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG---HGVEADV-SYPKLI 342
P++LE+ L +A G H+V V++ G I+ WG G+L + D + P+
Sbjct: 138 PRLLEALQGLPVAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPSRSLAEDTKTIPREA 197
Query: 343 DALN--GSNIHMVACGE 357
LN G + A GE
Sbjct: 198 SGLNEDGFEVRRTAKGE 214
Score = 80 (33.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 26/72 (36%), Positives = 34/72 (47%)
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--V 515
V ASCG HTA + +G+ +L+TWG G GQLGH D P V+ V
Sbjct: 240 VKASCGSRHTAVV-------TGTG-----ELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 287
Query: 516 SDDISFCKVACG 527
+ V+CG
Sbjct: 288 DKQLQVRAVSCG 299
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 304 (112.1 bits), Expect = 8.3e-24, P = 8.3e-24
Identities = 85/303 (28%), Positives = 141/303 (46%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ VT ++F +G LG G PK ++AL G I ++ G H
Sbjct: 60 ANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLS 119
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G
Sbjct: 120 TEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 176
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSN 481
++F +G G +G G ++ PR+V +K V++ +CG + A+++ N
Sbjct: 177 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLD--------N 228
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
G +++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G ++
Sbjct: 229 G----EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 284
Query: 542 SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGA 599
+ G+ YGQLG+ P I K R +E AC S H + ++ VY WG+
Sbjct: 285 AWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWGQ-C 342
Query: 600 NGQ 602
GQ
Sbjct: 343 RGQ 345
Score = 289 (106.8 bits), Expect = 3.9e-22, P = 3.9e-22
Identities = 81/226 (35%), Positives = 112/226 (49%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
+T ++F FG LG GD ST VP+++E L K++K++ G H E
Sbjct: 66 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTE--- 121
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIAL 534
+G+ ++ WG QLG+G + P+ V + I +VACG ++AL
Sbjct: 122 -----DGV----VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 172
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKH-RYIEDIACGSYHIAVVSSKSEV 592
A G+VF+ G + GQ+GS GST PT R N H + + IACG V EV
Sbjct: 173 AADGEVFAWGYNNCGQVGS-GSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEV 231
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
Y WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 232 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 277
Score = 270 (100.1 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 76/273 (27%), Positives = 126/273 (46%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + D + L+PK LE+ +S++ GS H +L T+ G +++WG +LG+G
Sbjct: 83 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 142
Query: 335 DVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
P ++ L + VACG H+ A+ G+++ WG +N G +G S + P
Sbjct: 143 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNCGQVGSGSTANQPTP 200
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
RKV+ + ++ SI CG + A+ G+++ +G G LG G+ + P V L
Sbjct: 201 RKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 260
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ CG HT A+ + GL L+ WG GQLG G+ + P +
Sbjct: 261 SVCVNQIVCGYAHTLALTD--------EGL----LYAWGANTYGQLGTGNKNNLLSPAHI 308
Query: 514 KVSDDISFCKVACGHSI--TIALTATGQVFSMG 544
V + ++A HS + A T G V+ G
Sbjct: 309 MVEKE-RVVEIAACHSAHTSAAKTQGGHVYMWG 340
Score = 257 (95.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 62/213 (29%), Positives = 113/213 (53%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALN 346
+V + ++ +ACGS H++ + G++F+WG + G++G G A+ P K+ + L+
Sbjct: 149 QVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH 208
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ +ACG+ + AV +G++Y WG +G LGL ++++ P +V+ + + +
Sbjct: 209 IKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAA-LHSVCV 264
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ I CG HT A+T G L+ +G T+G LG G++++ P + KE +A+C
Sbjct: 265 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSA 324
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
HT+A KT G + ++ WG GQ
Sbjct: 325 HTSA-----AKTQGGH------VYMWGQ-CRGQ 345
Score = 242 (90.2 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 76/282 (26%), Positives = 129/282 (45%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSA 421
VT + +++ +G N LG S +P+K+ + G +I S+ G H T
Sbjct: 66 VTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLSTED 122
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGS 480
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+ +
Sbjct: 123 GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALA--------A 174
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+G ++F WG GQ+G G PR V C+ + +S +ACG + ++A+
Sbjct: 175 DG----EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVS---IACGQTSSMAVLD 227
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTW 595
G+V+ G GQLG G+ G T + H + I CG H ++ + +Y W
Sbjct: 228 NGEVYGWGYNGNGQLGL-GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 286
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G GQLG G+ N +P + +++ V+ C S T+A
Sbjct: 287 GANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 328
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 303 (111.7 bits), Expect = 8.7e-24, P = 8.7e-24
Identities = 85/303 (28%), Positives = 140/303 (46%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ VT ++F +G LG G PK ++AL G I ++ G H
Sbjct: 31 ANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLS 90
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G
Sbjct: 91 TEDGVVYAWG---HNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSN 481
++F +G G +G G ++ PR+V +K V+ +CG + A+++ N
Sbjct: 148 EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD--------N 199
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
G +++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G ++
Sbjct: 200 G----EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 542 SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGA 599
+ G+ YGQLG+ P I K R +E AC S H + ++ VY WG+
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWGQ-C 313
Query: 600 NGQ 602
GQ
Sbjct: 314 RGQ 316
Score = 286 (105.7 bits), Expect = 6.9e-22, P = 6.9e-22
Identities = 81/226 (35%), Positives = 112/226 (49%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
+T ++F FG LG GD ST VP+++E L K++K++ G H E
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTE--- 92
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIAL 534
+G+ ++ WG QLG+G + P+ V + I +VACG ++AL
Sbjct: 93 -----DGV----VYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKH-RYIEDIACGSYHIAVVSSKSEV 592
A G+VF+ G + GQ+GS GST PT R N H + + IACG V EV
Sbjct: 144 AADGEVFAWGYNNCGQVGS-GSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
Y WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Score = 266 (98.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 75/273 (27%), Positives = 125/273 (45%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + D + L+PK LE+ +S++ GS H +L T+ G +++WG +LG+G
Sbjct: 54 LGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 335 DVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
P ++ L + VACG H+ A+ G+++ WG +N G +G S + P
Sbjct: 114 QGIAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNCGQVGSGSTTNQPTP 171
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
RKV+ + ++ I CG + A+ G+++ +G G LG G+ + P V L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ CG HT A+ + GL L+ WG GQLG G+ + P +
Sbjct: 232 SVCVNQIVCGYAHTLALTD--------EGL----LYAWGANTYGQLGTGNKNNLLSPAHI 279
Query: 514 KVSDDISFCKVACGHSI--TIALTATGQVFSMG 544
V + ++A HS + A T G V+ G
Sbjct: 280 MVEKE-RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 251 (93.4 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 61/213 (28%), Positives = 112/213 (52%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALN 346
+V + ++ +ACGS H++ + G++F+WG + G++G G + P K+ + L+
Sbjct: 120 QVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLH 179
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ +ACG+ + AV +G++Y WG +G LGL ++++ P +V+ + + +
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAA-LHSVCV 235
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ I CG HT A+T G L+ +G T+G LG G++++ P + KE +A+C
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSA 295
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
HT+A KT G + ++ WG GQ
Sbjct: 296 HTSA-----AKTQGGH------VYMWGQ-CRGQ 316
Score = 238 (88.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 75/282 (26%), Positives = 128/282 (45%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSA 421
VT + +++ +G N LG S +P+K+ + G +I S+ G H T
Sbjct: 37 VTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGPHVLLSTED 93
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGS 480
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+ +
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALA--------A 145
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+G ++F WG GQ+G G PR V C+ + + +ACG + ++A+
Sbjct: 146 DG----EVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVG---IACGQTSSMAVLD 198
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTW 595
G+V+ G GQLG G+ G T + H + I CG H ++ + +Y W
Sbjct: 199 NGEVYGWGYNGNGQLGL-GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G GQLG G+ N +P + +++ V+ C S T+A
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 299
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 189 (71.6 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 56/189 (29%), Positives = 88/189 (46%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS---YPKLID 343
P ++ T V S+ CG +H V +TK G+++S G G+LG G + S YP +
Sbjct: 35 PNDMDGTAVT---SVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP--VS 89
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW--IPRKVSGQME 401
+ + I ++ G HT +VT G ++ WG H G LG S+ + W PR+V +
Sbjct: 90 WTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEH--GQLGMESKFT-WQGTPRRVQEIND 146
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
+Q++S G H A+ G++F +G+ G H P VE L + V
Sbjct: 147 IVQVAS---GSNHCIALDEGGRVFVWGEQADGRCIHR-------PEPVEQLSGVPIVRVL 196
Query: 462 CGVWHTAAI 470
G H A+
Sbjct: 197 AGARHCLAL 205
Score = 185 (70.2 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 52/198 (26%), Positives = 94/198 (47%)
Query: 279 ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
AD R P+ +E + + G++H + ++ G +F+WG+ + G+LG +
Sbjct: 173 ADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTS 232
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVS 397
+ + ++G + ACG+ HT +T G +++G D + G +V + ++ P VS
Sbjct: 233 VQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTN--PTAVS 290
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
+ G ++ I G HT AI G + FG + G LG+G + S PR+ + L +
Sbjct: 291 -DLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDELDHVTG 348
Query: 458 VMASCGVWHTAAIVEVAG 475
V A +H V +G
Sbjct: 349 VFAG---YHQTFFVRSSG 363
Score = 174 (66.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 59/192 (30%), Positives = 82/192 (42%)
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
P VE L + V G H A+ SG+ +FTWG G+LG D
Sbjct: 181 PEPVEQLSGVPIVRVLAGARHCLAL-----SASGA-------VFTWGQNNSGELGIDDLR 228
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTR 563
P+ V D + + ACG + T+ LT G+ FS GS GQ G K PT
Sbjct: 229 PQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTA 288
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
+ I ++ IA G+ H + K Y +G ++GQLG+G + TP + L D
Sbjct: 289 VSDLIGS-HVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL-D- 344
Query: 624 QVKSVVCGSNFT 635
V V G + T
Sbjct: 345 HVTGVFAGYHQT 356
Score = 163 (62.4 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 56/182 (30%), Positives = 84/182 (46%)
Query: 373 GDGIHNLGLLG-QVSEISHWIPRKVSG---QMEGLQISSICCGPWHTAAITSAGKLFTFG 428
G G G LG ++SE + +P ++ G M+G ++S+ CG HT +T GK+++ G
Sbjct: 7 GCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVG 66
Query: 429 DGTFGALGHGDRSSTSVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
G LG G R+ S V K + S G HT ++ + +G +
Sbjct: 67 SNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD--------DG----R 114
Query: 488 LFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS- 545
+F WG GQLG + P V+ +DI +VA G + IAL G+VF G
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGTPRRVQEINDI--VQVASGSNHCIALDEGGRVFVWGEQ 172
Query: 546 AD 547
AD
Sbjct: 173 AD 174
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/172 (27%), Positives = 79/172 (45%)
Query: 470 IVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
IV+VA ++ L ++F WG+ A+G+ H EP V+ + +V G
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQADGRCIHRP-EP------VEQLSGVPIVRVLAGA 199
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+AL+A+G VF+ G + G+LG + + + + + ACG H +++
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTH 259
Query: 589 KSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAIC 639
+++G A GQ G G K+T PT V L V + G+ T AIC
Sbjct: 260 CGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Score = 148 (57.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 51/162 (31%), Positives = 74/162 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRV-VP-LCVKVSDDI---SFCKVACGHSITIALTATGQVF 541
+L G EGQLG +E + VP + +D+ + V CG T+ LT G+++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 542 SMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
S+GS GQLG + GS +P + K I I+ G H V+ V+ WG
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAK---IIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 598 GANGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAI 638
+GQLG Q TP V+ + D + V GSN A+
Sbjct: 121 NEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIAL 160
Score = 136 (52.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/182 (26%), Positives = 80/182 (43%)
Query: 465 WHTAA-IVEV-AGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISF 521
W ++A I+++ AG++ + ++F WG GQLG + P V+ +DI
Sbjct: 90 WTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDI-- 147
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
+VA G + IAL G+VF G + G P +E + I + G+
Sbjct: 148 VQVASGSNHCIALDEGGRVFVWGEQ------ADGRCIHRPEPVE-QLSGVPIVRVLAGAR 200
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H +S+ V+TWG+ +G+LG D + + V + V CG N T + H
Sbjct: 201 HCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLT-H 259
Query: 642 KG 643
G
Sbjct: 260 CG 261
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 189 (71.6 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 56/189 (29%), Positives = 88/189 (46%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS---YPKLID 343
P ++ T V S+ CG +H V +TK G+++S G G+LG G + S YP +
Sbjct: 35 PNDMDGTAVT---SVTCGEQHTVFLTKDGKMWSVGSNMDGQLGRGSRTEGSFSIYP--VS 89
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW--IPRKVSGQME 401
+ + I ++ G HT +VT G ++ WG H G LG S+ + W PR+V +
Sbjct: 90 WTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEH--GQLGMESKFT-WQGTPRRVQEIND 146
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
+Q++S G H A+ G++F +G+ G H P VE L + V
Sbjct: 147 IVQVAS---GSNHCIALDEGGRVFVWGEQADGRCIHR-------PEPVEQLSGVPIVRVL 196
Query: 462 CGVWHTAAI 470
G H A+
Sbjct: 197 AGARHCLAL 205
Score = 185 (70.2 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 52/198 (26%), Positives = 94/198 (47%)
Query: 279 ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
AD R P+ +E + + G++H + ++ G +F+WG+ + G+LG +
Sbjct: 173 ADGRCIHRPEPVEQLSGVPIVRVLAGARHCLALSASGAVFTWGQNNSGELGIDDLRPQTS 232
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVS 397
+ + ++G + ACG+ HT +T G +++G D + G +V + ++ P VS
Sbjct: 233 VQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTN--PTAVS 290
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
+ G ++ I G HT AI G + FG + G LG+G + S PR+ + L +
Sbjct: 291 -DLIGSHVTRIAAGACHTIAICK-GAPYPFGLNSSGQLGNGKIMTQSTPRKTDELDHVTG 348
Query: 458 VMASCGVWHTAAIVEVAG 475
V A +H V +G
Sbjct: 349 VFAG---YHQTFFVRSSG 363
Score = 174 (66.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 59/192 (30%), Positives = 82/192 (42%)
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
P VE L + V G H A+ SG+ +FTWG G+LG D
Sbjct: 181 PEPVEQLSGVPIVRVLAGARHCLAL-----SASGA-------VFTWGQNNSGELGIDDLR 228
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTR 563
P+ V D + + ACG + T+ LT G+ FS GS GQ G K PT
Sbjct: 229 PQTSVQHVHQMDGLGVVEAACGDNHTVLLTHCGRTFSFGSDALGQCGFGKKVEKRTNPTA 288
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
+ I ++ IA G+ H + K Y +G ++GQLG+G + TP + L D
Sbjct: 289 VSDLIGS-HVTRIAAGACHTIAIC-KGAPYPFGLNSSGQLGNGKIMTQSTPRKTDEL-D- 344
Query: 624 QVKSVVCGSNFT 635
V V G + T
Sbjct: 345 HVTGVFAGYHQT 356
Score = 163 (62.4 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 56/182 (30%), Positives = 84/182 (46%)
Query: 373 GDGIHNLGLLG-QVSEISHWIPRKVSG---QMEGLQISSICCGPWHTAAITSAGKLFTFG 428
G G G LG ++SE + +P ++ G M+G ++S+ CG HT +T GK+++ G
Sbjct: 7 GCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVG 66
Query: 429 DGTFGALGHGDRSSTSVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
G LG G R+ S V K + S G HT ++ + +G +
Sbjct: 67 SNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTD--------DG----R 114
Query: 488 LFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS- 545
+F WG GQLG + P V+ +DI +VA G + IAL G+VF G
Sbjct: 115 VFAWGSNEHGQLGMESKFTWQGTPRRVQEINDI--VQVASGSNHCIALDEGGRVFVWGEQ 172
Query: 546 AD 547
AD
Sbjct: 173 AD 174
Score = 159 (61.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 48/172 (27%), Positives = 79/172 (45%)
Query: 470 IVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
IV+VA ++ L ++F WG+ A+G+ H EP V+ + +V G
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGEQADGRCIHRP-EP------VEQLSGVPIVRVLAGA 199
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+AL+A+G VF+ G + G+LG + + + + + ACG H +++
Sbjct: 200 RHCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLTH 259
Query: 589 KSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAIC 639
+++G A GQ G G K+T PT V L V + G+ T AIC
Sbjct: 260 CGRTFSFGSDALGQCGFGKKVEKRTNPTAVSDLIGSHVTRIAAGACHTIAIC 311
Score = 148 (57.2 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 51/162 (31%), Positives = 74/162 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRV-VP-LCVKVSDDI---SFCKVACGHSITIALTATGQVF 541
+L G EGQLG +E + VP + +D+ + V CG T+ LT G+++
Sbjct: 4 ELLGCGHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMW 63
Query: 542 SMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
S+GS GQLG + GS +P + K I I+ G H V+ V+ WG
Sbjct: 64 SVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAK---IIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 598 GANGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAI 638
+GQLG Q TP V+ + D + V GSN A+
Sbjct: 121 NEHGQLGMESKFTWQGTPRRVQEIND--IVQVASGSNHCIAL 160
Score = 136 (52.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 49/182 (26%), Positives = 80/182 (43%)
Query: 465 WHTAA-IVEV-AGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISF 521
W ++A I+++ AG++ + ++F WG GQLG + P V+ +DI
Sbjct: 90 WTSSAKIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQGTPRRVQEINDI-- 147
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
+VA G + IAL G+VF G + G P +E + I + G+
Sbjct: 148 VQVASGSNHCIALDEGGRVFVWGEQ------ADGRCIHRPEPVE-QLSGVPIVRVLAGAR 200
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
H +S+ V+TWG+ +G+LG D + + V + V CG N T + H
Sbjct: 201 HCLALSASGAVFTWGQNNSGELGIDDLRPQTSVQHVHQMDGLGVVEAACGDNHTVLLT-H 259
Query: 642 KG 643
G
Sbjct: 260 CG 261
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 299 (110.3 bits), Expect = 2.4e-23, P = 2.4e-23
Identities = 84/303 (27%), Positives = 139/303 (45%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ VT ++F +G LG G PK ++ L G I ++ G H
Sbjct: 31 ASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLS 90
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G
Sbjct: 91 TEDGVVYAWG---HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADG 147
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSN 481
++F +G G +G G ++ PR+V +K V+ +CG + A+++ N
Sbjct: 148 EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLD--------N 199
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
G +++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G ++
Sbjct: 200 G----EVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLY 255
Query: 542 SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGA 599
+ G+ YGQLG+ P I K R +E AC S H + ++ VY WG+
Sbjct: 256 AWGANTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWGQ-C 313
Query: 600 NGQ 602
GQ
Sbjct: 314 RGQ 316
Score = 285 (105.4 bits), Expect = 8.9e-22, P = 8.9e-22
Identities = 81/226 (35%), Positives = 112/226 (49%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
+T ++F FG LG GD ST VP+++E L K++K++ G H E
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTE--- 92
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIAL 534
+G+ ++ WG QLG+G + P+ V + I +VACG ++AL
Sbjct: 93 -----DGV----VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMAL 143
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKH-RYIEDIACGSYHIAVVSSKSEV 592
A G+VF+ G + GQ+GS GST PT R N H + + IACG V EV
Sbjct: 144 AADGEVFAWGYNNCGQVGS-GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEV 202
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
Y WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Score = 265 (98.3 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 75/273 (27%), Positives = 124/273 (45%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + D + L+PK LE +S++ GS H +L T+ G +++WG +LG+G
Sbjct: 54 LGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTN 113
Query: 335 DVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
P ++ L + VACG H+ A+ G+++ WG +N G +G S + P
Sbjct: 114 QGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG--YNNCGQVGSGSTANQPTP 171
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
RKV+ + ++ I CG + A+ G+++ +G G LG G+ + P V L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALH 231
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ CG HT A+ + GL L+ WG GQLG G+ + P +
Sbjct: 232 SVCVNQIVCGYAHTLALTD--------EGL----LYAWGANTYGQLGTGNKNNLLSPAHI 279
Query: 514 KVSDDISFCKVACGHSI--TIALTATGQVFSMG 544
V + ++A HS + A T G V+ G
Sbjct: 280 MVEKE-RVVEIAACHSAHTSAAKTQGGHVYMWG 311
Score = 255 (94.8 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 62/213 (29%), Positives = 113/213 (53%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALN 346
+V + ++ +ACGS H++ + G++F+WG + G++G G A+ P K+ + L+
Sbjct: 120 QVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLH 179
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ +ACG+ + AV +G++Y WG +G LGL ++++ P +V+ + + +
Sbjct: 180 IKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLT---PVRVAA-LHSVCV 235
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ I CG HT A+T G L+ +G T+G LG G++++ P + KE +A+C
Sbjct: 236 NQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSA 295
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
HT+A KT G + ++ WG GQ
Sbjct: 296 HTSA-----AKTQGGH------VYMWGQ-CRGQ 316
Score = 244 (91.0 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 76/282 (26%), Positives = 129/282 (45%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSA 421
VT + +++ +G N LG S +P+K+ G + G +I S+ G H T
Sbjct: 37 VTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEG-LCGKKIKSLSYGSGPHVLLSTED 93
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGS 480
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+ +
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALA--------A 145
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+G ++F WG GQ+G G PR V C+ + + +ACG + ++A+
Sbjct: 146 DG----EVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVG---IACGQTSSMAVLD 198
Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTW 595
G+V+ G GQLG G+ G T + H + I CG H ++ + +Y W
Sbjct: 199 NGEVYGWGYNGNGQLGL-GNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 257
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G GQLG G+ N +P + +++ V+ C S T+A
Sbjct: 258 GANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 299
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 189 (71.6 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 53/161 (32%), Positives = 79/161 (49%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G S ++ALTA QV+S GS
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 547 DYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGS-YHIAVVSSKS---EVYTWGKG- 598
+GQLG +FPT R+ + +A G Y + +V ++ +Y G+
Sbjct: 581 TFGQLGH----SEFPTTVPRLSKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLYYSGRQD 636
Query: 599 -ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
A G + +TP L+ + + V G + A+
Sbjct: 637 RAEGDTLPENPSGTKTPVLLSCSKLGYISRVTAGKDSYLAL 677
Score = 176 (67.0 bits), Expect = 3.1e-23, Sum P(2) = 3.1e-23
Identities = 51/176 (28%), Positives = 86/176 (48%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G +H VL+T+ G+++S+G K E S P L AL G ++ VA G FH+
Sbjct: 47 ALGVRHGVLLTEDGEVYSFGT-LPWK-SESAEICPSSPLLESALVGHHVITVATGSFHSG 104
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG----LQISSICCGPWHTAA 417
AVT SG +Y WG+ + + P +S ++I + CG HT A
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVRILQLACGEEHTLA 164
Query: 418 ITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
++ + +++ +G G LG + + P++VE L + +CG +H+ A+V+
Sbjct: 165 LSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 158 (60.7 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 289 VLESTVV-LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+LES +V ++A GS H+ VT+ G ++ WGE + G+ + V P + +
Sbjct: 83 LLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDS 142
Query: 348 SN-------IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
I +ACGE HT A++LS +++ WG G LGL+ ++ P+KV +
Sbjct: 143 ETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQ-LGLITTTFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAI 418
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 139 (54.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 57/195 (29%), Positives = 89/195 (45%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 495 RVKTRTVVLTPTY--SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 552
Query: 348 SN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQMEGLQ 404
IH+ A G H+ A+T +Y+WG + G LG SE +PR KVS + G
Sbjct: 553 KEVIHLEAGGS-HSLALTAKSQVYSWGS--NTFGQLGH-SEFPTTVPRLSKVSSE-NG-- 605
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLKELKTVMASCG 463
+ S+ G ++ + F G + + G DR+ ++P K V+ SC
Sbjct: 606 VWSVAAGQDYSLFLVDTED---FQPGLYYS-GRQDRAEGDTLPENPSGTKT--PVLLSCS 659
Query: 464 VWHTAAIVEVAGKTS 478
+ V AGK S
Sbjct: 660 KLGYISRV-TAGKDS 673
Score = 119 (46.9 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 48/205 (23%), Positives = 89/205 (43%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P ++ G G + G H +T G++++FG T S P L
Sbjct: 32 PERLPG-WGGKTVLQAALGVRHGVLLTEDGEVYSFG--TLPWKSESAEICPSSPLLESAL 88
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
+ + G +H+ A+ E +G+ ++ WG+ A GQ + + P
Sbjct: 89 VGHHVITVATGSFHSGAVTE--------SGV----VYMWGENAAGQCAVANQQYVPEPSP 136
Query: 513 VKVSDD-------ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
V +SD + ++ACG T+AL+ + ++++ G+ QLG +T FP
Sbjct: 137 VSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGC--QLGLITTT--FPVTKP 192
Query: 566 GNIKH---RYIEDIACGSYH-IAVV 586
++H R + +ACG++H +A+V
Sbjct: 193 QKVEHLAGRVVLQVACGAFHSLALV 217
Score = 109 (43.4 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S ++EV+TWGKG GQLGHGD + P V+ L K+V + G + + A+
Sbjct: 517 SLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 282 (104.3 bits), Expect = 3.9e-23, P = 3.9e-23
Identities = 79/245 (32%), Positives = 124/245 (50%)
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
++ Q++SWG G+ G+LG D P+L+ + +I M+ACG H A+T G ++TW
Sbjct: 13 EEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTW 72
Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G G + G LG ++ +P+ VS + + I+ G H+ ++ +G +FT G+G+F
Sbjct: 73 GRG--SSGQLGHGDILNITLPKLVSFFDDSV-ITQAAAGWSHSGFVSDSGCIFTCGNGSF 129
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHGD S S P +V M +CG+ H+ +V AG ++ +G
Sbjct: 130 GQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHS--LVLFAGN----------QVCGFG 177
Query: 493 DGAEGQLGHGDAEPRVVPL-CVKVSD--DISFCKVACGHSITIALTATGQVFSMGSADYG 549
G GQLG + V L CV VS D+ +++ + A++A GQ FS G G
Sbjct: 178 SGKRGQLGFSSDRIKSVNLPCV-VSGLKDVEVVRISANGDHSAAISADGQFFSWGR---G 233
Query: 550 QLGSP 554
G P
Sbjct: 234 FCGGP 238
Score = 279 (103.3 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 66/191 (34%), Positives = 102/191 (53%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
+D LLP++L T + +ACG H + +T G++F+WG GS G+LGHG +++ PKL
Sbjct: 34 QDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKL 93
Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+ + S I A G H+ V+ SG ++T G+G + G LG +S P KVS
Sbjct: 94 VSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG--SFGQLGHGDTLSLSTPAKVS-HFN 150
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DR-SSTSVPREVETLKELKTVM 459
+ + CG H+ + + ++ FG G G LG DR S ++P V LK+++ V
Sbjct: 151 NDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVR 210
Query: 460 ASCGVWHTAAI 470
S H+AAI
Sbjct: 211 ISANGDHSAAI 221
Score = 240 (89.5 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 68/220 (30%), Positives = 111/220 (50%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSN 481
+++++G GT G LG +P ++ +L L ++ M +CG H A+ TSG
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIAL------TSGG- 67
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
K+FTWG G+ GQLGHGD +P V DD + A G S + ++ +G +F
Sbjct: 68 -----KVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIF 122
Query: 542 SMGSADYGQLGSPGSTGKFPTRIE-GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
+ G+ +GQLG G T T + + + ++ +ACG H V+ + ++V +G G
Sbjct: 123 TCGNGSFGQLGH-GDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKR 181
Query: 601 GQLGHGDNENKQT--PTLVEALRDKQVKSVVCGSNFTAAI 638
GQLG + K P +V L+D +V + + +AAI
Sbjct: 182 GQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAI 221
Score = 220 (82.5 bits), Expect = 5.0e-15, P = 5.0e-15
Identities = 82/275 (29%), Positives = 123/275 (44%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
G + G LG +S P KVS + + CG H+ + + ++ FG G G
Sbjct: 125 GNGSFGQLGHGDTLSLSTPAKVS-HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQ 183
Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGD 493
LG SV L V++ G+ +V ++ S +S+ + F+WG
Sbjct: 184 LGFSSDRIKSV--------NLPCVVS--GL-KDVEVVRISANGDHSAAISADGQFFSWGR 232
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA-----DY 548
G G G P+ +P +SF +VA G + + LT G+VF +GS +
Sbjct: 233 GFCG--GPDVHAPQSLP------SPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEK 284
Query: 549 GQLGSPGSTGKFPTRIE-GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QL S F + +K + IA G+ H A V+ EV TWG G +GQLG G+
Sbjct: 285 QQLQIDSSEALFEKVPDFDGVK---VMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGLGN 341
Query: 608 NENKQTPTLVEA----LRDKQVKSVVCGSNFTAAI 638
++ +P LV LR K++K V CGS FT A+
Sbjct: 342 TNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 375
Score = 212 (79.7 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 50/157 (31%), Positives = 75/157 (47%)
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
G+T +++++WG G +GQLG + ++P + ++ S +ACG + IAL
Sbjct: 5 GETQADEE-EEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIAL 63
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
T+ G+VF+ G GQLG ++ I A G H VS ++T
Sbjct: 64 TSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFT 123
Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
G G+ GQLGHGD + TP V + VK V CG
Sbjct: 124 CGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACG 160
Score = 177 (67.4 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 60/206 (29%), Positives = 103/206 (50%)
Query: 276 ISSADRRDALLPKVL---ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
+ D + LPK++ + +V+ A A G H+ V+ G IF+ G GS G+LGHG
Sbjct: 80 LGHGDILNITLPKLVSFFDDSVITQA---AAGWSHSGFVSDSGCIFTCGNGSFGQLGHGD 136
Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI--SH 390
+S P + N ++ MVACG H+ + + +G G G LG S+ S
Sbjct: 137 TLSLSTPAKVSHFNNDSVKMVACGMRHSLVLFAGNQVCGFGSG--KRGQLGFSSDRIKSV 194
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
+P VSG ++ +++ I H+AAI++ G+ F++G G G G + S+P +
Sbjct: 195 NLPCVVSG-LKDVEVVRISANGDHSAAISADGQFFSWGRGFCG--GPDVHAPQSLPSPL- 250
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGK 476
+ +E+ + G W+ A ++ V G+
Sbjct: 251 SFREV-----AVG-WNHALLLTVDGE 270
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 186 (70.5 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 57/163 (34%), Positives = 80/163 (49%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G ++ALTA QV+S GS
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 547 DYGQLGSPGSTGKFPTRIEGNIK---HRYIEDIACG-SYHIAVVSSKSEVYTWGKGANGQ 602
+GQLG FPT + K + IA G Y + +V + E + G +G+
Sbjct: 587 TFGQLGH----SDFPTTVPRLAKISSENGVWSIAAGRDYSLFLVDT--EDFQPGLYYSGR 640
Query: 603 LG--HGDN--EN---KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GDN EN +TP L+ + + V G + A+
Sbjct: 641 QDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLAL 683
Score = 174 (66.3 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 53/178 (29%), Positives = 92/178 (51%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G KH VL+T+ G+++S+G + G VE S P L +AL G + VA G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGT-LPWRSGP-VEICPSSPILENALVGQYVITVATGSFHSG 104
Query: 362 AVTLSGDLYTWGDG------IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
AVT +G Y WG+ + N + + + +S I + + ++I + CG HT
Sbjct: 105 AVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVS--IADSEASPLLAVRILQLACGEEHT 162
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
A++ + +++ +G G LG + + P++VE L + +CG +H+ A+V+
Sbjct: 163 LALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 154 (59.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 289 VLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK---LIDA 344
+LE+ +V ++A GS H+ VT G + WGE S G+ + V P + D+
Sbjct: 83 ILENALVGQYVITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADS 142
Query: 345 ----LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
L I +ACGE HT A+++S +++ WG G LGL+ ++ P+KV +
Sbjct: 143 EASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTAFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAI 418
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 137 (53.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 501 RVKTRTVVLTPTY--SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 558
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQ 399
+ + G +H+ A+T +Y+WG + G LG S+ +PR K+S +
Sbjct: 559 KEVIHLEAGGYHSLALTAKSQVYSWGS--NTFGQLGH-SDFPTTVPRLAKISSE 609
Score = 128 (50.1 bits), Expect = 0.00059, P = 0.00059
Identities = 41/164 (25%), Positives = 71/164 (43%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
G L L G +S++S + RK + + + ++ G + +++T+G G G
Sbjct: 478 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 537
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD P V+ L + + G +H+ A+ + ++++WG
Sbjct: 538 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT------------AKSQVYSWGS 585
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
GQLGH D P VP K+S + +A G ++ L T
Sbjct: 586 NTFGQLGHSDF-PTTVPRLAKISSENGVWSIAAGRDYSLFLVDT 628
Score = 127 (49.8 bits), Expect = 0.00075, P = 0.00075
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
GE +L +++TWG G G LG + P V ++G ++ + G +H+
Sbjct: 515 GEADALLPSLRTEVWTWGKGKE--GQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHS 571
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
A+T+ +++++G TFG LGH D T+VPR L + + GVW AA
Sbjct: 572 LALTAKSQVYSWGSNTFGQLGHSD-FPTTVPR-------LAKISSENGVWSIAA 617
Score = 108 (43.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
L +++ SC +A V VA T + LS KK+ + + G + P +K
Sbjct: 392 LNSLVVSCA---SAVGVRVAA-TYEAGALSLKKVMNFYSTTPCETGAQAGSSAIGPEGLK 447
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI---EGNIKHR 571
S + + + + +L + + G + +L PG + R+ +K R
Sbjct: 448 DSREEQVKQESMQGKKSSSLVDIREEETEGGSR--RLSLPGLLSQVSPRLLRKAARVKTR 505
Query: 572 YI--EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
+ G + S ++EV+TWGKG GQLGHGD + P V+ L K+V +
Sbjct: 506 TVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLE 565
Query: 630 CGSNFTAAI 638
G + A+
Sbjct: 566 AGGYHSLAL 574
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 185 (70.2 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 56/163 (34%), Positives = 80/163 (49%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G ++ALTA QV+S GS
Sbjct: 527 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 586
Query: 547 DYGQLGSPGSTGKFPTRIEGNIK---HRYIEDIACG-SYHIAVVSSKSEVYTWGKGANGQ 602
+GQLG FPT + K + +A G Y + +V + E + G +G+
Sbjct: 587 TFGQLGH----SDFPTTVPRLAKISSENGVWSVAAGRDYSLFLVDT--EDFQPGLYYSGR 640
Query: 603 LG--HGDN--EN---KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GDN EN +TP L+ + + V G + A+
Sbjct: 641 QDPTEGDNLPENHSGSKTPVLLSCSKLGYISRVTAGKDSYLAL 683
Score = 174 (66.3 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 53/178 (29%), Positives = 92/178 (51%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G KH VL+T+ G+++S+G + G VE S P L +AL G + VA G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGT-LPWRSGP-VEICPSSPILENALVGQYVVTVATGSFHSG 104
Query: 362 AVTLSGDLYTWGDG------IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
AVT +G Y WG+ + N + + + +S I + + ++I + CG HT
Sbjct: 105 AVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVS--IADSEASPLLAVRILQLACGEEHT 162
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
A++ + +++ +G G LG + + P++VE L + +CG +H+ A+V+
Sbjct: 163 LALSISREIWAWGTGC--QLGLITTAFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 155 (59.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 42/138 (30%), Positives = 70/138 (50%)
Query: 289 VLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK---LIDA 344
+LE+ +V ++A GS H+ VT G + WGE S G+ + V P + D+
Sbjct: 83 ILENALVGQYVVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADS 142
Query: 345 ----LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
L I +ACGE HT A+++S +++ WG G LGL+ ++ P+KV +
Sbjct: 143 EASPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTAFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAI 418
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 137 (53.3 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 501 RVKTRTVVLTPTY--SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 558
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQ 399
+ + G +H+ A+T +Y+WG + G LG S+ +PR K+S +
Sbjct: 559 KEVIHLEAGGYHSLALTAKSQVYSWGS--NTFGQLGH-SDFPTTVPRLAKISSE 609
Score = 129 (50.5 bits), Expect = 0.00046, P = 0.00046
Identities = 42/164 (25%), Positives = 71/164 (43%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
G L L G +S++S + RK + + + ++ G + +++T+G G G
Sbjct: 478 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 537
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD P V+ L + + G +H+ A+ + ++++WG
Sbjct: 538 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT------------AKSQVYSWGS 585
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
GQLGH D P VP K+S + VA G ++ L T
Sbjct: 586 NTFGQLGHSDF-PTTVPRLAKISSENGVWSVAAGRDYSLFLVDT 628
Score = 128 (50.1 bits), Expect = 0.00059, P = 0.00059
Identities = 35/114 (30%), Positives = 57/114 (50%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
GE +L +++TWG G G LG + P V ++G ++ + G +H+
Sbjct: 515 GEADALLPSLRTEVWTWGKGKE--GQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHS 571
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
A+T+ +++++G TFG LGH D T+VPR L + + GVW AA
Sbjct: 572 LALTAKSQVYSWGSNTFGQLGHSD-FPTTVPR-------LAKISSENGVWSVAA 617
Score = 108 (43.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 47/189 (24%), Positives = 80/189 (42%)
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
L +++ SC +A V VA T + LS KK+ + + G + P +K
Sbjct: 392 LNSLVVSCA---SAVGVRVAA-TYEAGALSLKKVMNFYSTTPCETGAQAGSSAIGPEGLK 447
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI---EGNIKHR 571
S + + + + +L + + G + +L PG + R+ +K R
Sbjct: 448 DSREEQVKQESMQGKKSSSLVDIREEETEGGSR--RLSLPGLLSQVSPRLLRKAARVKTR 505
Query: 572 YI--EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
+ G + S ++EV+TWGKG GQLGHGD + P V+ L K+V +
Sbjct: 506 TVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLE 565
Query: 630 CGSNFTAAI 638
G + A+
Sbjct: 566 AGGYHSLAL 574
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 199 (75.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 63/216 (29%), Positives = 95/216 (43%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALN---GSNIHMVACGEFHTCAVTL-----SGD 368
++SWG G+LG G + P+ ++ N G ++ +ACG HT +T G
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
W G G LG S S +P VS E + S+ CG +HT+ ++S G ++++G
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Query: 429 ---------DGTFGALGHGDRSSTSVPREVE--TLKELKTVMASCGVWHTAAIVEVAGKT 477
D F + GD SVPR++ + + V SCG HT +V+
Sbjct: 349 MERGLGLCPDVNFTEVEAGD---DSVPRKISGGSSRFRDPVQVSCGAAHTVLVVD----- 400
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
KL++WG G G LG G+ VP V
Sbjct: 401 ------GGYKLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 192 (72.6 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 62/216 (28%), Positives = 100/216 (46%)
Query: 397 SGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLK 453
SG+ G L++ ++ G + AI + G L+ +G+ R S TS+P L
Sbjct: 134 SGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILD 193
Query: 454 -ELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
+TV+ +CG H A+V G N L++WG+ GQLG GD E R P
Sbjct: 194 FHGRTVLKVACGDEHVVALVG-PGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQ 252
Query: 512 CVKVSDD---ISFCKVACGHSITIALTATGQV-------FSMGSADYGQLGSPGS-TGKF 560
V+ + ++ +ACG T LT + ++ G + GQLG + +
Sbjct: 253 TVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSL 312
Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
P + +H Y+ + CG +H +VVSS+ V++WG
Sbjct: 313 PEPVSDLPEHAYLVSVDCGLFHTSVVSSEGYVWSWG 348
Score = 190 (71.9 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 60/176 (34%), Positives = 83/176 (47%)
Query: 296 LDAQSIACGSKHAVLVT--KQ---GQIFSW--GEGSGGKLGHGVEADVSYPKLIDAL-NG 347
L IACG+ H L+T K+ G W G G G+LGH S P+ + L
Sbjct: 263 LTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEH 322
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS--EISHW---IPRKVSGQMEG 402
+ + V CG FHT V+ G +++WG LGL V+ E+ +PRK+SG
Sbjct: 323 AYLVSVDCGLFHTSVVSSEGYVWSWGME-RGLGLCPDVNFTEVEAGDDSVPRKISGGSSR 381
Query: 403 LQIS-SICCGPWHTAAITSAG-KLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
+ + CG HT + G KL+++G G G LG G+ S VP V ELK
Sbjct: 382 FRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWPNELK 437
Score = 183 (69.5 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 61/207 (29%), Positives = 95/207 (45%)
Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELK--TVM-ASCGVWHTAAIVEVAGKTSGS 480
L+++G+ G LG GD S + P+ VET + TV +CG HTA + +
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTY---RKETP 285
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQ 539
G S +T+G G GQLGH + +P V + + V CG T +++ G
Sbjct: 286 KGPSI--CWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGY 343
Query: 540 VFSMGSA-------DYGQLGSPGSTGKFPTRIEG-NIKHRYIEDIACGSYH-IAVVSSKS 590
V+S G D P +I G + + R ++CG+ H + VV
Sbjct: 344 VWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSSRFRDPVQVSCGAAHTVLVVDGGY 403
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLV 617
++++WG+G NG LG G+ + PTLV
Sbjct: 404 KLWSWGRGRNGVLGTGNVSDCYVPTLV 430
Score = 175 (66.7 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 80/288 (27%), Positives = 124/288 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWG----EGS--GGKLGHGVEADVSYPKLIDALNGSNIHMV 353
++ GS ++ + G ++ WG + S +L + +P ++D +G + V
Sbjct: 146 TVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSF-TSIPIPFP-ILD-FHGRTVLKV 202
Query: 354 ACGEFHTCAVTLSGD-----------LYTWGDGIHNLGLLGQVSEISHWIPRKVS--GQM 400
ACG+ H A+ GD LY+WG+ H G LG S P+ V Q
Sbjct: 203 ACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHH--GQLGLGDGESRARPQTVETFNQK 260
Query: 401 EGLQISSICCGPWHTAAITSAGKL-------FTFGDGTFGALGHGDRSSTSVPREVETLK 453
GL + I CG HTA +T + +TFG G G LGH S+S+P V L
Sbjct: 261 SGLTVYDIACGAHHTALLTYRKETPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLP 320
Query: 454 E-LKTVMASCGVWHTAAIVEVA-----GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
E V CG++HT+ + G G GL FT E + G D+ PR
Sbjct: 321 EHAYLVSVDCGLFHTSVVSSEGYVWSWGMERGL-GLCPDVNFT-----EVEAGD-DSVPR 373
Query: 508 VVPL-CVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGS 553
+ + D + +V+CG + T+ + G +++S G G LG+
Sbjct: 374 KISGGSSRFRDPV---QVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGT 418
Score = 162 (62.1 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 42/122 (34%), Positives = 65/122 (53%)
Query: 515 VSDDIS--FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-------FPTRIE 565
+S+D+S +A G + TIALT G V+S G +G+LG+ + + FP + E
Sbjct: 10 ISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAE 69
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
G+ + R + +A G+YH VS V+ WG GQLG D EN P L++ L +++
Sbjct: 70 GD-RIRIV-GVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIKNLFERET 126
Query: 626 KS 627
S
Sbjct: 127 SS 128
Score = 161 (61.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 66/238 (27%), Positives = 106/238 (44%)
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
D S LI I +A GE HT A+T G +Y+WG G+ G LG E +P
Sbjct: 3 DKSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGM--FGRLGTGKESDELVPV 60
Query: 395 KVS--GQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
V Q EG ++I + G +H+ A++ G ++ +G +G LG D ++ P ++
Sbjct: 61 LVEFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGF-DGENSLAPCLIK 119
Query: 451 TLKELKTVMASCGVW--HTAAIVEVAGKTSGSN-GLSSKK---LFTWGDGAEGQLGHGDA 504
L E +T +S + ++V +GS L+ L+ WG+ Q +
Sbjct: 120 NLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGN-VPPQ--DSEP 176
Query: 505 EPRV----VPLCVKVSD--DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
+PR+ +P+ + D + KVACG +AL G + S D L S G+
Sbjct: 177 DPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGN 234
Score = 153 (58.9 bits), Expect = 1.7e-22, Sum P(2) = 1.7e-22
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN---GSNIHMV--A 354
S+A G H + +T G ++SWG G G+LG G E+D P L++ N G I +V A
Sbjct: 20 SLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVA 79
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVS 386
G +H+ AV+ G ++ WG I+ LG G+ S
Sbjct: 80 AGAYHSLAVSDDGSVWCWGYNIYGQLGFDGENS 112
Score = 129 (50.5 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 37/110 (33%), Positives = 58/110 (52%)
Query: 540 VFSMGSADYGQLG-SPGSTGKFPTRIEG-NIKHRY-IEDIACGSYHIAVVSSKSEV---- 592
++S G+ +GQLG G + P +E N K + DIACG++H A+++ + E
Sbjct: 229 LYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRKETPKGP 288
Query: 593 ---YTWGKGANGQLGHGDNENKQTPTLVEALRDKQ-VKSVVCGSNFTAAI 638
+T+G G NGQLGH N++ P V L + + SV CG T+ +
Sbjct: 289 SICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVV 338
Score = 125 (49.1 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 42/157 (26%), Positives = 66/157 (42%)
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIK--H 570
+V D+ C V G +++A+ G ++ G+ Q P F + I I H
Sbjct: 137 EVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVP-PQDSEPDPRLSFTSIPIPFPILDFH 195
Query: 571 -RYIEDIACGSYHIAVVSSKSEV-----------YTWGKGANGQLGHGDNENKQTPTLVE 618
R + +ACG H+ + ++ Y+WG +GQLG GD E++ P VE
Sbjct: 196 GRTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVE 255
Query: 619 ALRDKQ---VKSVVCGSNFTAAICLHKGVSIADHSIC 652
K V + CG++ TA + K SIC
Sbjct: 256 TFNQKSGLTVYDIACGAHHTALLTYRKETPKGP-SIC 291
Score = 125 (49.1 bits), Expect = 0.00032, P = 0.00032
Identities = 55/217 (25%), Positives = 90/217 (41%)
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE-----LKTV 458
+I S+ G HT A+T G ++++G G FG LG G S VP VE + ++ V
Sbjct: 17 KIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIV 76
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---- 514
+ G +H+ A+ + GS ++ WG GQLG D E + P +K
Sbjct: 77 GVAAGAYHSLAVSD-----DGS-------VWCWGYNIYGQLGF-DGENSLAPCLIKNLFE 123
Query: 515 --------------VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF 560
V D+ C V G +++A+ G ++ G+ Q P F
Sbjct: 124 RETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVP-PQDSEPDPRLSF 182
Query: 561 PT-RIEGNIK--H-RYIEDIACGSYHIAVVSSKSEVY 593
+ I I H R + +ACG H+ + +++
Sbjct: 183 TSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIH 219
Score = 40 (19.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 159 TNKDSGDTQPILVAYENSPQ 178
T K+S + P+LV + N +
Sbjct: 50 TGKESDELVPVLVEFPNQAE 69
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 312 (114.9 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 86/296 (29%), Positives = 145/296 (48%)
Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEA-DVSYP--KLIDALNGSNIHMVACGEFHTCAVTLS 366
L T +G + +WG S KLG V A D S P + + N +I ++ G +++ +T +
Sbjct: 709 LDTSRG-LMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTEN 767
Query: 367 GDLYTWGDGIHN---LGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
GD+Y WG G + +LG + +I +P K+ + + +S C H AA+ + G
Sbjct: 768 GDVYLWGRGAVKTPAVPILG-IPQIEDQLLPFKLESLSDVVSVSIGFC---HGAAVRANG 823
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
+L T+G G G LGHGD ++ P+ +++L CG HT + + NG
Sbjct: 824 ELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK--------NG 875
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
K+++WG GQLG GD P+ V + + ++A G + LT + +V
Sbjct: 876 ----KVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLV 931
Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
G+ +G+ S PT + ++K+ +I+ + CG Y A ++ +VYTWG G
Sbjct: 932 FGNG--AAMGA-ASVVSLPTLVP-SLKYLHIDRLCCGHYSTAAITECGDVYTWGTG 983
Score = 279 (103.3 bits), Expect = 6.6e-19, Sum P(2) = 6.6e-19
Identities = 89/289 (30%), Positives = 135/289 (46%)
Query: 359 HTCAVTL--SGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
H A+ L S L TWG + LG + S P ++ I SI G +++
Sbjct: 703 HRSAIHLDTSRGLMTWGSASNCKLGFKVTAKDQSQPTPERLPN-FNIPDICSISSGSYYS 761
Query: 416 AAITSAGKLFTFGDGTFGA-----LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
+ +T G ++ +G G LG +P ++E+L ++ +V S G H AA+
Sbjct: 762 SVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDVVSV--SIGFCHGAAV 819
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
+NG +L TWG G GQLGHGD ++ P ++ +V CG
Sbjct: 820 --------RANG----ELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKH 867
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
TI LT G+V+S G+++YGQLG T P ++ K+ ++ IA GS H AV+++
Sbjct: 868 TICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQ-IASGSTHCAVLTTS 926
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
EV +G GA G PTLV +L+ + + CG TAAI
Sbjct: 927 KEVLVFGNGA----AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAI 971
Score = 272 (100.8 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 76/221 (34%), Positives = 108/221 (48%)
Query: 253 GDVFIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
GDV++W I D LLP LES + D S++ G H V
Sbjct: 768 GDVYLWGRGAVKTPAVPILGIPQIE-----DQLLPFKLES--LSDVVSVSIGFCHGAAVR 820
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
G++ +WG G G+LGHG + PK+I +L I V CGE HT +T +G +Y+W
Sbjct: 821 ANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880
Query: 373 GDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
G + LGL G V++ H P +VS +E + I G H A +T++ ++ FG+G
Sbjct: 881 GASEYGQLGL-GDVTQ--HSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNGA 936
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
A+G S S+P V +LK L CG + TAAI E
Sbjct: 937 --AMGAA--SVVSLPTLVPSLKYLHIDRLCCGHYSTAAITE 973
Score = 248 (92.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 77/277 (27%), Positives = 133/277 (48%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK-----LGHGVEADVSYPKL 341
P+ L + + D SI+ GS ++ ++T+ G ++ WG G+ LG D P
Sbjct: 740 PERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFK 799
Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
+++L S++ V+ G H AV +G+L TWG G N G LG + ++ I K+ +
Sbjct: 800 LESL--SDVVSVSIGFCHGAAVRANGELLTWGVG-EN-GQLGH-GDTNNQIEPKIIQSLT 854
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
I+ + CG HT +T GK++++G +G LG GD + S P +V L++ + +
Sbjct: 855 SFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIA 914
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
G H A + +SK++ +G+GA + P +VP + D
Sbjct: 915 SGSTHCAVLT------------TSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHID--- 959
Query: 522 CKVACGHSITIALTATGQVFSMGSA-DYGQLGSPGST 557
++ CGH T A+T G V++ G+ + G G+ T
Sbjct: 960 -RLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTET 995
Score = 242 (90.2 bits), Expect = 6.1e-15, Sum P(2) = 6.1e-15
Identities = 58/174 (33%), Positives = 91/174 (52%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
IA GS H ++T ++ +G G+ G + VS P L+ +L +I + CG + T
Sbjct: 913 IASGSTHCAVLTTSKEVLVFGNGAA----MGAASVVSLPTLVPSLKYLHIDRLCCGHYST 968
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A+T GD+YTWG G LG G +E S P+ + + I I CG HTA +T
Sbjct: 969 AAITECGDVYTWGTG-QELGHGGNSTETS---PKLIEA-LRNQSIRQISCGGRHTAFLTD 1023
Query: 421 AGKLFTFGDGTFGALGH--GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
+G++FT G +FG LG GD++ P+ +E+L + + SCG + A+ +
Sbjct: 1024 SGRIFTCGKDSFGQLGQMSGDQNK---PKRIESLTKTTFISVSCGENYNVALFD 1074
Score = 234 (87.4 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 48/150 (32%), Positives = 81/150 (54%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
K+++WG GQLG GD P+ V + + ++A G + LT + +V G+
Sbjct: 876 KVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGNG 935
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
+G+ S PT + ++K+ +I+ + CG Y A ++ +VYTWG G +LGHG
Sbjct: 936 --AAMGA-ASVVSLPTLVP-SLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHG 989
Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
N + +P L+EALR++ ++ + CG TA
Sbjct: 990 GNSTETSPKLIEALRNQSIRQISCGGRHTA 1019
Score = 190 (71.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 55/173 (31%), Positives = 90/173 (52%)
Query: 470 IVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
++++A G T + +SK++ +G+GA + P +VP + D ++ CGH
Sbjct: 910 VLQIASGSTHCAVLTTSKEVLVFGNGAAMGAASVVSLPTLVPSLKYLHID----RLCCGH 965
Query: 529 SITIALTATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
T A+T G V++ G+ +LG G ST P IE ++++ I I+CG H A ++
Sbjct: 966 YSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEA-LRNQSIRQISCGGRHTAFLT 1022
Query: 588 SKSEVYTWGKGANGQLGH--GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
++T GK + GQLG GD +NK P +E+L SV CG N+ A+
Sbjct: 1023 DSGRIFTCGKDSFGQLGQMSGD-QNK--PKRIESLTKTTFISVSCGENYNVAL 1072
Score = 180 (68.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
LP ++ S L + CG +T+ G +++WG G +LGHG + + PKLI+AL
Sbjct: 946 LPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEAL 1003
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+I ++CG HT +T SG ++T G + G LGQ+S + P+++ + I
Sbjct: 1004 RNQSIRQISCGGRHTAFLTDSGRIFTCGKD--SFGQLGQMSGDQNK-PKRIESLTKTTFI 1060
Query: 406 SSICCGPWHTAAITSAGKLF 425
S + CG + A+ + F
Sbjct: 1061 S-VSCGENYNVALFDTTRSF 1079
Score = 174 (66.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 49/142 (34%), Positives = 72/142 (50%)
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
L I +CCG + TAAIT G ++T+G G LGHG S+ + P+ +E L+ SC
Sbjct: 956 LHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEALRNQSIRQISC 1013
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH--GDA-EPRVVPLCVKVSDDI 519
G HTA + + SG ++FT G + GQLG GD +P+ + K +
Sbjct: 1014 GGRHTAFLTD-----SG-------RIFTCGKDSFGQLGQMSGDQNKPKRIESLTKTT--- 1058
Query: 520 SFCKVACGHSITIALTATGQVF 541
F V+CG + +AL T + F
Sbjct: 1059 -FISVSCGENYNVALFDTTRSF 1079
Score = 174 (66.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 63/252 (25%), Positives = 102/252 (40%)
Query: 414 HTAAI---TSAGKLFTFGDGTFGALGH---GDRSSTSVPREVETLKELKTVMASCGVWHT 467
H +AI TS G L T+G + LG S P + S G +++
Sbjct: 703 HRSAIHLDTSRG-LMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYS 761
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ-----LGHGDAEPRVVPLCVKVSDDISFC 522
+ + E NG ++ WG GA LG E +++P ++ D+
Sbjct: 762 SVLTE--------NG----DVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--V 807
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
V+ G A+ A G++ + G + GQLG + + +I ++ +I + CG H
Sbjct: 808 SVSIGFCHGAAVRANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKH 867
Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
++ +VY+WG GQLG GD +P V AL V + GS A + K
Sbjct: 868 TICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSK 927
Query: 643 GVSIADHSICSG 654
V + + G
Sbjct: 928 EVLVFGNGAAMG 939
Score = 170 (64.9 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 48/149 (32%), Positives = 71/149 (47%)
Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
G S S+P V +LK L CG + TAAI E ++TWG G E
Sbjct: 939 GAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGD------------VYTWGTGQE- 985
Query: 498 QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
LGHG P ++ + S +++CG T LT +G++F+ G +GQLG
Sbjct: 986 -LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGD 1044
Query: 558 GKFPTRIEGNIKHRYIEDIACG-SYHIAV 585
P RIE K +I ++CG +Y++A+
Sbjct: 1045 QNKPKRIESLTKTTFIS-VSCGENYNVAL 1072
Score = 44 (20.5 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 13/50 (26%), Positives = 27/50 (54%)
Query: 775 IKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEY 824
IK NK++ ++++PS ++ ++ ++T S + NSE + EY
Sbjct: 1280 IKVNKVT----NILNITQSPSSMASYTTSNPTVTAVSSSSSENSEFLKEY 1325
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 183 (69.5 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 53/160 (33%), Positives = 80/160 (50%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G +GQLGHGD PR+ PLCVK D + G ++ALTA QV+S GS
Sbjct: 521 EVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 580
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS-YHIAVVSSKSEVYTWGKGANGQLG- 604
+GQLG P + N ++ + +A G Y + +V + E + G +G+
Sbjct: 581 TFGQLGHSDFPTTVPRLAKMNSENG-VWSVAAGQDYSLFLVDT--EDFQPGLYYSGRQDP 637
Query: 605 -HGDN--ENK---QTPTLVEALRDKQVKSVVCGSNFTAAI 638
GDN EN +TP L+ + + V G + A+
Sbjct: 638 TEGDNLPENHSGTKTPVLLSCSKLGYISRVTAGKDSCLAL 677
Score = 174 (66.3 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 51/176 (28%), Positives = 86/176 (48%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G KH VL+T+ G+++S+G E S P L +AL G + VA G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPWRS--EPAELCPSSPILENALVGQYVVTVATGSFHSG 104
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ----MEGLQISSICCGPWHTAA 417
AVT SG +Y WG+ + + P +S + ++I + CG HT A
Sbjct: 105 AVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLA 164
Query: 418 ITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
++ + +++ +G G LG + + P++VE L + +CG +H+ A+V+
Sbjct: 165 LSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 160 (61.4 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 289 VLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI---DA 344
+LE+ +V ++A GS H+ VT+ G ++ WGE S G+ + V P + D+
Sbjct: 83 ILENALVGQYVVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDS 142
Query: 345 ----LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
L I +ACGE HT A+++S +++ WG G LGL+ ++ P+KV +
Sbjct: 143 ETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTTFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAI 418
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 136 (52.9 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 35/124 (28%), Positives = 59/124 (47%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 495 RVKTRTVVLTPTY--SGEADALLPSLRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDG 552
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ + G +H+ A+T +Y+WG + G LG S+ +PR E + S
Sbjct: 553 KEVIHLEAGGYHSLALTAKSQVYSWGS--NTFGQLGH-SDFPTTVPRLAKMNSEN-GVWS 608
Query: 408 ICCG 411
+ G
Sbjct: 609 VAAG 612
Score = 114 (45.2 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 48/205 (23%), Positives = 89/205 (43%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P ++ G G + G H +T G++++FG T S P L
Sbjct: 32 PERLPG-WTGKTVLQAALGVKHGVLLTEDGEVYSFG--TLPWRSEPAELCPSSPILENAL 88
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
V + G +H+ A+ E +G+ ++ WG+ + GQ + + P
Sbjct: 89 VGQYVVTVATGSFHSGAVTE--------SGV----VYMWGENSAGQCAVANQQYVPEPNP 136
Query: 513 VKVSDD-------ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
V +SD + ++ACG T+AL+ + ++++ G+ QLG +T FP
Sbjct: 137 VSISDSETSPLLAVRILQLACGEEHTLALSISREIWAWGTGC--QLGLITTT--FPVTKP 192
Query: 566 GNIKH---RYIEDIACGSYH-IAVV 586
++H R + +ACG++H +A+V
Sbjct: 193 QKVEHLAGRVVLQVACGAFHSLALV 217
Score = 107 (42.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S ++EV+TWGKG +GQLGHGD + P V+ L K+V + G + A+
Sbjct: 517 SLRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLAL 568
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 296 (109.3 bits), Expect = 2.4e-22, P = 2.4e-22
Identities = 76/227 (33%), Positives = 116/227 (51%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALN 346
K LE+ V+ IACG +H++ ++ GQ+F WGE + G+LG E A P+ + +L
Sbjct: 110 KSLENRQVIQ---IACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLC 166
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
+ ++ G H+ ++LSG ++ WG ++ G LG ++P V + G +
Sbjct: 167 EIPVAQISAGGNHSFVLSLSGVVFGWGS--NSAGQLGLGDTKDRFVPTIVKS-LCGKKTV 223
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
SI CG HTA ++ G +FTFG G FG LGH PR + L K +CG H
Sbjct: 224 SISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHH 283
Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
T E SSK ++++G G +GQLG+G+ + VPL V
Sbjct: 284 TLVFEE-----------SSKLIYSFGCGMQGQLGNGEQVKQSVPLPV 319
Score = 282 (104.3 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 65/217 (29%), Positives = 108/217 (49%)
Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTV 458
+E Q+ I CG H+ A+++ G+LF +G+ T G LG +++ T P+ +++L E+
Sbjct: 112 LENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVA 171
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
S G H+ ++ ++G +F WG + GQLG GD + R VP VK
Sbjct: 172 QISAGGNHSF-VLSLSGV-----------VFGWGSNSAGQLGLGDTKDRFVPTIVKSLCG 219
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
++CG T L+ G VF+ GS +GQLG + R+ + + + C
Sbjct: 220 KKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELWGSKVSQVTC 279
Query: 579 GSYHIAVVSSKSE-VYTWGKGANGQLGHGDNENKQTP 614
G +H V S+ +Y++G G GQLG+G+ + P
Sbjct: 280 GRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Score = 236 (88.1 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ L+S + I+ G H+ +++ G +F WG S G+LG G D P ++ +L
Sbjct: 159 PQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLC 218
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
G ++CG HT ++ G ++T+G G G LG S PR ++ ++ G ++S
Sbjct: 219 GKKTVSISCGGEHTATLSKGGTVFTFGSG--GFGQLGHNSLKDEHHPRLIA-ELWGSKVS 275
Query: 407 SICCGPWHTAAITSAGKL-FTFGDGTFGALGHGDRSSTSVPREV 449
+ CG HT + KL ++FG G G LG+G++ SVP V
Sbjct: 276 QVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPV 319
Score = 210 (79.0 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 55/194 (28%), Positives = 94/194 (48%)
Query: 443 TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-H 501
++V R +++L+ + + +CG H+ A+ SN +LF WG+ GQLG
Sbjct: 103 STVCRPLKSLENRQVIQIACGDQHSMAL---------SN---DGQLFVWGENTHGQLGLR 150
Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
+ P ++ +I +++ G + + L+ +G VF GS GQLG + +F
Sbjct: 151 KEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFV 210
Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
I ++ + I+CG H A +S V+T+G G GQLGH +++ P L+ L
Sbjct: 211 PTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLIAELW 270
Query: 622 DKQVKSVVCGSNFT 635
+V V CG + T
Sbjct: 271 GSKVSQVTCGRHHT 284
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 44/142 (30%), Positives = 71/142 (50%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D +D +P +++S SI+CG +H ++K G +F++G G G+LGH D +P
Sbjct: 204 DTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHP 263
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+LI L GS + V CG HT S L Y++G G+ G LG ++ +P V
Sbjct: 264 RLIAELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQ--GQLGNGEQVKQSVPLPVLL 321
Query: 399 QMEGLQIS--SICCGPWHTAAI 418
E + + + G H+ A+
Sbjct: 322 PTECTEFTMEKLITGEHHSFAL 343
Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 59/210 (28%), Positives = 99/210 (47%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ + D + L P L++ + +SI CG AVL+ G++ + +
Sbjct: 59 LHNEDADEKLEPLQLQNERI---RSIVCGEAGAVLLADDGKVLIMDQST----------- 104
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPR 394
V P + +L + +ACG+ H+ A++ G L+ WG+ H LGL + + P+
Sbjct: 105 VCRP--LKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGL--RKEQAGTQSPQ 160
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
+ E + ++ I G H+ ++ +G +F +G + G LG GD VP V++L
Sbjct: 161 HLQSLCE-IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCG 219
Query: 455 LKTVMASCGVWHTAAIVEVAGK--TSGSNG 482
KTV SCG HTA + + G T GS G
Sbjct: 220 KKTVSISCGGEHTATLSK-GGTVFTFGSGG 248
Score = 174 (66.3 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 42/126 (33%), Positives = 69/126 (54%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
++ACG ++AL+ GQ+F G +GQLG G + P ++ ++ + I+ G
Sbjct: 119 QIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQ-SLCEIPVAQISAGG 177
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
H V+S V+ WG + GQLG GD +++ PT+V++L K+ S+ CG TA L
Sbjct: 178 NHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTAT--L 235
Query: 641 HKGVSI 646
KG ++
Sbjct: 236 SKGGTV 241
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 270 (100.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 91/304 (29%), Positives = 138/304 (45%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPK-LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-- 373
+F+WG S G+LG G + DV P+ L D ++ + G H+ VT GDL+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 374 -DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TAAITSAGKLFTFGDGT 431
DG LGL G +I ++ P K + G I + CG W T +T G++ + G +
Sbjct: 77 KDG--QLGL-GHTEDIPYFTPCK---SLFGCPIQQVACG-WDFTIMLTENGQVLSCGSNS 129
Query: 432 FGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
FG LG HG R VP+ +E KE K V + G+ H VA SG +F
Sbjct: 130 FGQLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHA-----VAATASGI-------VF 175
Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDD-----ISFCKVAC---GHSITIALTATGQVF 541
WG G G + +PL + + K C G + +LT G+V+
Sbjct: 176 QWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 234
Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
GS +GQL + + P +IE + ++ + I G H+ + +++TWG+
Sbjct: 235 VWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 601 GQLG 604
GQLG
Sbjct: 295 GQLG 298
Score = 219 (82.2 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 79/280 (28%), Positives = 125/280 (44%)
Query: 281 RRDALLPKVLESTVV-LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
+ D LLP+ L + I G H+ +VT G +F G G+LG G D+ Y
Sbjct: 33 KEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYF 92
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
+L G I VACG T +T +G + + G ++ G LG + H R V Q
Sbjct: 93 TPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGS--NSFGQLG----VPHGPRRCVVPQ 146
Query: 400 MEGLQISSICC---GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
L + C G H A T++G +F +G G + G ++P T KE
Sbjct: 147 AIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFF-TAKEPS 204
Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
V G+ ++ A+ +AG ++ + +++ WG GQL + E +P+ K+
Sbjct: 205 RVT---GLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN---EAAFLPVPQKIE 258
Query: 517 ----DDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
+ + G + +A T TG++F+ G ADYGQLG
Sbjct: 259 AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLG 298
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 70/238 (29%), Positives = 106/238 (44%)
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
P + A +A LF +G ++G LG G + +P+++ + ++V G +A+V
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVV 64
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVPLCVKVSDDISFCKVACGHS 529
T G + LF G +GQLG G E P P C K +VACG
Sbjct: 65 -----TDGGD------LFVCGLNKDGQLGLGHTEDIPYFTP-C-KSLFGCPIQQVACGWD 111
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
TI LT GQV S GS +GQLG P + P IE + K + + IA G H +
Sbjct: 112 FTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELH-KEKVV-CIAAGLRHAVAAT 169
Query: 588 SKSEVYTWGKG---ANGQLGHGDNE----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ V+ WG G +L G + P+ V L + + V+ GS+ +A++
Sbjct: 170 ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Score = 188 (71.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 80/288 (27%), Positives = 130/288 (45%)
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A + L+ WG + LGL G ++ +P++++ + + I G H+A +T
Sbjct: 10 AAPAAAALFAWGANSYGQLGL-GHKEDVL--LPQQLNDFCKPRSVRRITGGGGHSAVVTD 66
Query: 421 AGKLFTFG---DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
G LF G DG G LGH + P ++L +CG T + E
Sbjct: 67 GGDLFVCGLNKDGQLG-LGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLTE----- 118
Query: 478 SGSNGLSSKKLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIA 533
NG ++ + G + GQLG HG PR VVP +++ + C +A G +A
Sbjct: 119 ---NG----QVLSCGSNSFGQLGVPHG---PRRCVVPQAIELHKEKVVC-IAAGLRHAVA 167
Query: 534 LTATGQVFSMGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAV 585
TA+G VF G+ A G+ PG T K P+R+ G +++ + GS H A
Sbjct: 168 ATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSAS 226
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG 631
++ EVY WG +GQL + + P +EA ++++V ++ G
Sbjct: 227 LTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSG 273
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 284 (105.0 bits), Expect = 2.9e-22, P = 2.9e-22
Identities = 100/351 (28%), Positives = 166/351 (47%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ +I G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVPI--PEDIVQAEAGGMHTVCLSKSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTEDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
+F R + V + L+ +K M V + +V+VA L++ +
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGE 192
Query: 488 LFTWGDGAEGQLGH--------GDA---EPRVVPLCVKVSD-----DISFCKVACGHSIT 531
L+T G G +GQLG G E +VP CV + + F CG T
Sbjct: 193 LYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFT 252
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYHIAVVSS 588
A+++ G V+ G ++Y QLG+PG+ F P + N ++ + G +H + S
Sbjct: 253 FAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVR-FSGGQHHTVCMDS 311
Query: 589 KSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 312 EGRAYSLGRAEYGRLGLGEGAEEKSVPTLISRL--PAVSSVACGASVGYAV 360
Score = 281 (104.0 bits), Expect = 6.7e-22, P = 6.7e-22
Identities = 102/375 (27%), Positives = 171/375 (45%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVSY 338
++ AL+P + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 58 KKPALVP-IPEDIVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEMV 111
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKVS 397
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 112 PGKVELQE--KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKEL 455
M ++++S G H +T+ G+L+T G G G LG ++ + +E L
Sbjct: 170 LSMPVVKVAS---GNDHLVMLTADGELYTLGSGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 456 KTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVP--L 511
K VM S G + + +SS+ ++ +G QLG E VP L
Sbjct: 227 KCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTPGTESCFVPQNL 286
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGK-FPTRIEGNIK 569
+ S+ + + G T+ + + G+ +S+G A+YG+LG G+ K PT I +
Sbjct: 287 TSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEYGRLGLGEGAEEKSVPTLIS---R 343
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV--EALRDKQVKS 627
+ +ACG+ V+ V+ WG G N QLG G E+ +P + + L ++ V S
Sbjct: 344 LPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLS 403
Query: 628 VVCGSNFTAAICLHK 642
V G T + K
Sbjct: 404 VSSGGQHTVLLVKDK 418
Score = 150 (57.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 55/198 (27%), Positives = 93/198 (46%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H + T G + T G G G LG G+ P V +++ V A G HT + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVPIPEDI--VQAEAGGMHTVCLSK 84
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSI 530
SG +++++G EG LG + +VP V++ + + +V+ G S
Sbjct: 85 -----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSH 130
Query: 531 TIALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
T ALT G+VF GS + G +G P P +++ ++ + +A G+ H+ ++
Sbjct: 131 TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSMP---VVKVASGNDHLVML 187
Query: 587 SSKSEVYTWGKGANGQLG 604
++ E+YT G G GQLG
Sbjct: 188 TADGELYTLGSGEQGQLG 205
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 9/25 (36%), Positives = 11/25 (44%)
Query: 701 DDCFIKLNTTSESGSNSQIPRNSSG 725
+ CF+ N TS S R S G
Sbjct: 278 ESCFVPQNLTSFKNSTKSWVRFSGG 302
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 194 (73.4 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 69/214 (32%), Positives = 98/214 (45%)
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF---GDGTFGA-LGHGD--RSST 443
H IP S + Q SS+ G + + + S G LF G T G D +S
Sbjct: 411 HIIPTLDSTSDDSSQHSSVDGGIYLSDLVISNGCLFESCEEGGDTAGTDFCPADLLQSKK 470
Query: 444 SVPREVETLKELK----TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT----WGDGA 495
S+ TL++ + ++ T+ + V TS S L LFT WG G
Sbjct: 471 SISLTDVTLEDTDRNSFSPVSPSDTHRTSNLRAVRASTSESRNLLPS-LFTEVWSWGKGH 529
Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
EGQLGHGD PR+ PLC+K K+ G + ++ALTA QV+S GS +GQLG
Sbjct: 530 EGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGSEKFGQLGRMN 589
Query: 556 STGKFP--TRIEGNIKHRYIEDIACGSYHIAVVS 587
S P T + I+ + D+A G H +++
Sbjct: 590 SPSTVPNLTTVSDGIR---VWDVAAGQTHTLLLA 620
Score = 161 (61.7 bits), Expect = 3.1e-22, Sum P(2) = 3.1e-22
Identities = 46/140 (32%), Positives = 68/140 (48%)
Query: 289 VLESTVVLDAQ---SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
VLEST L Q S++ GS H VT+ G + WGE S G+ G V P + +
Sbjct: 72 VLEST--LSGQHVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVTVV 129
Query: 346 NGSN-------IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + VACG HT A++ +++ WG G LGL+ V + W P+KV
Sbjct: 130 DDETHPPQLVRVLNVACGAQHTLALSNKHEVWAWGSGCQ-LGLVTNVFPV--WKPQKVE- 185
Query: 399 QMEGLQISSICCGPWHTAAI 418
+ G + I CG +H+ A+
Sbjct: 186 HLVGRYVVQIACGAFHSLAL 205
Score = 139 (54.0 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 63/274 (22%), Positives = 105/274 (38%)
Query: 149 SHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTRA-ESVSKS 207
SH S S LT + L +SP A S S T++A+ + A ++V++
Sbjct: 354 SHPPSRQSSLTCPFGSEQSDELTLRPSSP------ALSRTDSITSSARKHIIASDTVTEQ 407
Query: 208 LNFVASGGLD---DANSRSSTADXXXXXXXXXXXXX-XXXXCHEDFDGLGDVFIWXXXXX 263
N LD D +S+ S+ D C E D G F
Sbjct: 408 KNQHIIPTLDSTSDDSSQHSSVDGGIYLSDLVISNGCLFESCEEGGDTAGTDFC-PADLL 466
Query: 264 XXXXXXXXXXXXISSADRRD--ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWG 321
+ DR + P T L A + +L + +++SWG
Sbjct: 467 QSKKSISLTDVTLEDTDRNSFSPVSPSDTHRTSNLRAVRASTSESRNLLPSLFTEVWSWG 526
Query: 322 EGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGL 381
+G G+LGHG P I +L+ + + G H+ A+T +Y+WG G
Sbjct: 527 KGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLALTAQCQVYSWGS--EKFGQ 584
Query: 382 LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
LG+++ S +P ++ +G+++ + G HT
Sbjct: 585 LGRMNSPST-VPN-LTTVSDGIRVWDVAAGQTHT 616
Score = 114 (45.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+EV++WGKG GQLGHGD + P +++L K+V + G+N + A+
Sbjct: 520 TEVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLAL 568
Score = 95 (38.5 bits), Expect = 7.5e-12, Sum P(2) = 7.5e-12
Identities = 38/169 (22%), Positives = 64/169 (37%)
Query: 472 EVAGKTSGSNG-----LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
E G T+G++ L SKK + D P V P + ++ + +
Sbjct: 450 EEGGDTAGTDFCPADLLQSKKSISLTDVTLEDTDRNSFSP-VSPSDTHRTSNLRAVRAST 508
Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
S + + +V+S G GQLG + ++ + + I G+ H +
Sbjct: 509 SESRNLLPSLFTEVWSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKEVVKITAGANHSLAL 568
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
+++ +VY+WG GQLG N P L +V V G T
Sbjct: 569 TAQCQVYSWGSEKFGQLGRM-NSPSTVPNLTTVSDGIRVWDVAAGQTHT 616
Score = 89 (36.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 56/212 (26%), Positives = 91/212 (42%)
Query: 331 GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
G VS KL+ L+ +H A G H + G +Y++G+ S +
Sbjct: 18 GYFCSVSPEKLL--LSRPVLH-AALGSLHGLLLIEGGQVYSFGEQPWKPVEPPPASLV-- 72
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HG-DRSSTSVPRE 448
+ +SGQ + S+ G +H +A+T G + +G+ ++G G G DR + P
Sbjct: 73 -LESTLSGQ----HVISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGTDRVPSPTPVT 127
Query: 449 V---ETLK-ELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH-G 502
V ET +L V+ +CG HT A+ SN +++ WG G QLG
Sbjct: 128 VVDDETHPPQLVRVLNVACGAQHTLAL---------SN---KHEVWAWGSGC--QLGLVT 173
Query: 503 DAEPRVVPLCVKVSDDISFCKVACG--HSITI 532
+ P P V+ ++ACG HS+ +
Sbjct: 174 NVFPVWKPQKVEHLVGRYVVQIACGAFHSLAL 205
Score = 44 (20.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 787 SRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPD 837
S + S A +P S+ SSP ++ + TD +S F+ Q N +PD
Sbjct: 262 SGQSSPAQTPQSKNSSPNYQVSPLTSTDTFSSS--FQ---QNTTNQETQPD 307
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 268 (99.4 bits), Expect = 4.1e-22, P = 4.1e-22
Identities = 95/314 (30%), Positives = 140/314 (44%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK-LIDALNGSNIHMVACGEFHT 360
+C S+ V+ +F+WG S G+LG G + DV P+ L D I V G H+
Sbjct: 5 SCASE---AVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGGHS 61
Query: 361 CAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TA 416
VT G L+ G DG LGL G E+ + + + G I + CG W T
Sbjct: 62 VVVTDGGGLFVCGLNKDG--QLGL-GHTEEVLRFT---ICKPLLGCPIRQVACG-WDFTI 114
Query: 417 AITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
+T G++ + G FG LG HG R VP+ +E L+E K V + G+ H A +
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTDTG 172
Query: 475 GKTSGSNGLSS--KKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSIT 531
GL+S ++L G L EP RV L C VA G +
Sbjct: 173 STFQWGTGLASSGRRLCP---GQNLPLFLTAKEPSRVTGL----ESSTVVCAVA-GSDHS 224
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKS 590
+LT TG+++ G +GQL S + P R+E + + + + G H+ +
Sbjct: 225 ASLTDTGELYVWGRNKHGQLASLATFLPLPQRVEAHYFQDEKVTAVWSGWTHLVAKTETG 284
Query: 591 EVYTWGKGANGQLG 604
+V+TWG+ GQLG
Sbjct: 285 KVFTWGRADYGQLG 298
Score = 219 (82.2 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 85/281 (30%), Positives = 122/281 (43%)
Query: 281 RRDALLPKVLESTVVLDA-QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
+ D LLP+ L +S+ G H+V+VT G +F G G+LG G +V
Sbjct: 33 KEDVLLPQQLSDFCKSGCIKSVTGGGGHSVVVTDGGGLFVCGLNKDGQLGLGHTEEVLRF 92
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK--VS 397
+ L G I VACG T +T G + + G G LG + H PRK V
Sbjct: 93 TICKPLLGCPIRQVACGWDFTIMLTEKGQVLSCGSNA--FGQLG----VPHG-PRKCVVP 145
Query: 398 GQMEGLQISSIC--CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
+E L+ +C G H A T G F +G G + G ++P + T KE
Sbjct: 146 QAIECLREKVVCVAAGLRHALATTDTGSTFQWGTG-LASSGRRLCPGQNLPLFL-TAKEP 203
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
V G+ + + VAG ++ + +L+ WG GQL + +PL +V
Sbjct: 204 SRVT---GLESSTVVCAVAGSDHSASLTDTGELYVWGRNKHGQLA---SLATFLPLPQRV 257
Query: 516 S----DDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
D V G + +A T TG+VF+ G ADYGQLG
Sbjct: 258 EAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLG 298
Score = 193 (73.0 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 62/215 (28%), Positives = 102/215 (47%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACG 356
+ +ACG +++T++GQ+ S G + G+LG HG V P+ I+ L + VA G
Sbjct: 104 RQVACGWDFTIMLTEKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLR-EKVVCVAAG 161
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICC---GP 412
H A T +G + WG G+ + G L + ++ K ++ GL+ S++ C G
Sbjct: 162 LRHALATTDTGSTFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGS 221
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIV 471
H+A++T G+L+ +G G L + +P+ VE + + V A VW +
Sbjct: 222 DHSASLTDTGELYVWGRNKHGQLA-SLATFLPLPQRVEAHYFQDEKVTA---VW--SGWT 275
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
+ KT + K+FTWG GQLG P
Sbjct: 276 HLVAKTE------TGKVFTWGRADYGQLGRTLGSP 304
Score = 181 (68.8 bits), Expect = 8.0e-11, P = 8.0e-11
Identities = 67/235 (28%), Positives = 105/235 (44%)
Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE---LKTVMASCGVWHTAAIVEV 473
A+++A LF +G ++G LG G + +P+++ + +K+V G H+ + +
Sbjct: 10 AVSAAAVLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSGCIKSVTGGGG--HSVVVTDG 67
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITI 532
G LF G +GQLG G E + +C K +VACG TI
Sbjct: 68 GG------------LFVCGLNKDGQLGLGHTEEVLRFTIC-KPLLGCPIRQVACGWDFTI 114
Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
LT GQV S GS +GQLG P K P IE ++ + + +A G H +
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVPHGPRKCVVPQAIEC-LREKVV-CVAAGLRHALATTDTG 172
Query: 591 EVYTWGKG--ANGQ-LGHGDNE----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ WG G ++G+ L G N + P+ V L V V GS+ +A++
Sbjct: 173 STFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLESSTVVCAVAGSDHSASL 227
Score = 177 (67.4 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 82/285 (28%), Positives = 121/285 (42%)
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
AV+ + L+ WG + LGL G ++ +P+++S + I S+ G H+ +T
Sbjct: 10 AVSAAAVLFAWGANSYGQLGL-GHKEDVL--LPQQLSDFCKSGCIKSVTGGGGHSVVVTD 66
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
G LF G G LG G + L +CG W ++ G+
Sbjct: 67 GGGLFVCGLNKDGQLGLGHTEEVLRFTICKPLLGCPIRQVACG-WDFTIMLTEKGQV--- 122
Query: 481 NGLSSKKLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTA 536
LS G A GQLG HG PR VVP ++ + C VA G +A T
Sbjct: 123 --LSC------GSNAFGQLGVPHG---PRKCVVPQAIECLREKVVC-VAAGLRHALATTD 170
Query: 537 TGQVFSMGS--ADYGQLGSPGS------TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
TG F G+ A G+ PG T K P+R+ G ++ + GS H A ++
Sbjct: 171 TGSTFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTG-LESSTVVCAVAGSDHSASLTD 229
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG 631
E+Y WG+ +GQL P VEA +D++V +V G
Sbjct: 230 TGELYVWGRNKHGQLASLATF-LPLPQRVEAHYFQDEKVTAVWSG 273
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 182 (69.1 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L A+ + G++HA+L+ GQ+FSWG G G+LGHG +EA++ P+L++AL G + VA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEALQGLVMAEVA 216
Query: 355 CGEFHTCAVTLSGDLYTWG 373
G +H+ V+ +GD+Y WG
Sbjct: 217 AGGWHSVCVSETGDIYIWG 235
Score = 152 (58.6 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 41/109 (37%), Positives = 54/109 (49%)
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
QV G A+ G + FP ++ + ++ +CGS H AVV+ E+YTWG G
Sbjct: 267 QVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSRHTAVVTRTGELYTWGWG 325
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCGSNFTAAICLHKGVS 645
GQLGH D + P VE DKQ VK+V CG T + KG S
Sbjct: 326 KYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 374
Score = 148 (57.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
+P L+D GS+ +CG HT VT +G+LYTWG G + G LG S PR+V
Sbjct: 288 FPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHEDTTSLDRPRRVE 345
Query: 398 GQMEG-LQISSICCGPWHT 415
++ LQ+ ++ CGPW+T
Sbjct: 346 YFVDKQLQVKAVTCGPWNT 364
Score = 144 (55.7 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHT 467
CG HTA +T G+L+T+G G +G LGH D +S PR VE K+L+ +CG W+T
Sbjct: 305 CGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNT 364
Query: 468 AAIVEVAGKT 477
GK+
Sbjct: 365 YVYAVEKGKS 374
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P +L+ + DA +CGS+H +VT+ G++++WG G G+LGH + P+ ++
Sbjct: 289 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 347 GSNIHM--VACGEFHT 360
+ + V CG ++T
Sbjct: 349 DKQLQVKAVTCGPWNT 364
Score = 121 (47.7 bits), Expect = 0.00046, P = 0.00046
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
PR P ++ ++ ++ G + L A GQVFS G +GQLG + R+
Sbjct: 146 PRA-PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLL 204
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
++ + ++A G +H VS ++Y WG +GQL
Sbjct: 205 EALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
Score = 108 (43.1 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H + +AG++F++G G G LGHG + PR +E L+ L + G WH+ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 471 VE 472
E
Sbjct: 226 SE 227
Score = 102 (41.0 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 21/80 (26%), Positives = 40/80 (50%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G H + +G +++WG G H G LG + + PR + ++GL ++ + G WH+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRH--GQLGHGTLEAELEPRLLEA-LQGLVMAEVAAGGWHS 222
Query: 416 AAITSAGKLFTFGDGTFGAL 435
++ G ++ +G G L
Sbjct: 223 VCVSETGDIYIWGWNESGQL 242
Score = 97 (39.2 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNI-KHRYIEDIACG- 579
K +CG T +T TG++++ G YGQLG +T P R+E + K ++ + CG
Sbjct: 302 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGP 361
Query: 580 --SYHIAVVSSKS 590
+Y AV KS
Sbjct: 362 WNTYVYAVEKGKS 374
Score = 77 (32.2 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 25/72 (34%), Positives = 30/72 (41%)
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--V 515
V ASCG HTA + +L+TWG G GQLGH D P V+ V
Sbjct: 301 VKASCGSRHTAVVTRTG------------ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 348
Query: 516 SDDISFCKVACG 527
+ V CG
Sbjct: 349 DKQLQVKAVTCG 360
Score = 77 (32.2 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
L P++LE+ L +A G H+V V++ G I+ WG G+L
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 182 (69.1 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 35/79 (44%), Positives = 55/79 (69%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L A+ + G++HA+L+ GQ+FSWG G G+LGHG +EA++ P+L++AL G + VA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEALQGLVMAEVA 216
Query: 355 CGEFHTCAVTLSGDLYTWG 373
G +H+ V+ +GD+Y WG
Sbjct: 217 AGGWHSVCVSETGDIYIWG 235
Score = 152 (58.6 bits), Expect = 5.1e-22, Sum P(2) = 5.1e-22
Identities = 41/109 (37%), Positives = 54/109 (49%)
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
QV G A+ G + FP ++ + ++ +CGS H AVV+ E+YTWG G
Sbjct: 269 QVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVK-ASCGSRHTAVVTRTGELYTWGWG 327
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCGSNFTAAICLHKGVS 645
GQLGH D + P VE DKQ VK+V CG T + KG S
Sbjct: 328 KYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 376
Score = 148 (57.2 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 32/79 (40%), Positives = 46/79 (58%)
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
+P L+D GS+ +CG HT VT +G+LYTWG G + G LG S PR+V
Sbjct: 290 FPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHEDTTSLDRPRRVE 347
Query: 398 GQMEG-LQISSICCGPWHT 415
++ LQ+ ++ CGPW+T
Sbjct: 348 YFVDKQLQVKAVTCGPWNT 366
Score = 144 (55.7 bits), Expect = 3.5e-21, Sum P(2) = 3.5e-21
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHT 467
CG HTA +T G+L+T+G G +G LGH D +S PR VE K+L+ +CG W+T
Sbjct: 307 CGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNT 366
Query: 468 AAIVEVAGKT 477
GK+
Sbjct: 367 YVYAVEKGKS 376
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P +L+ + DA +CGS+H +VT+ G++++WG G G+LGH + P+ ++
Sbjct: 291 PALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 347 GSNIHM--VACGEFHT 360
+ + V CG ++T
Sbjct: 351 DKQLQVKAVTCGPWNT 366
Score = 121 (47.7 bits), Expect = 0.00047, P = 0.00047
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
PR P ++ ++ ++ G + L A GQVFS G +GQLG + R+
Sbjct: 146 PRA-PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLL 204
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
++ + ++A G +H VS ++Y WG +GQL
Sbjct: 205 EALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
Score = 108 (43.1 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H + +AG++F++G G G LGHG + PR +E L+ L + G WH+ +
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCV 225
Query: 471 VE 472
E
Sbjct: 226 SE 227
Score = 107 (42.7 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 27/103 (26%), Positives = 48/103 (46%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G H + +G +++WG G H G LG + + PR + ++GL ++ + G WH+
Sbjct: 166 GAEHALLLDAAGQVFSWGGGRH--GQLGHGTLEAELEPRLLEA-LQGLVMAEVAAGGWHS 222
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRS----STSVPREVETLKE 454
++ G ++ +G G L R+ +V RE L E
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNE 265
Score = 97 (39.2 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 25/73 (34%), Positives = 38/73 (52%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNI-KHRYIEDIACG- 579
K +CG T +T TG++++ G YGQLG +T P R+E + K ++ + CG
Sbjct: 304 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGP 363
Query: 580 --SYHIAVVSSKS 590
+Y AV KS
Sbjct: 364 WNTYVYAVEKGKS 376
Score = 77 (32.2 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 25/72 (34%), Positives = 30/72 (41%)
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--V 515
V ASCG HTA + +L+TWG G GQLGH D P V+ V
Sbjct: 303 VKASCGSRHTAVVTRTG------------ELYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 516 SDDISFCKVACG 527
+ V CG
Sbjct: 351 DKQLQVKAVTCG 362
Score = 77 (32.2 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
L P++LE+ L +A G H+V V++ G I+ WG G+L
Sbjct: 199 LEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 284 (105.0 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 111/388 (28%), Positives = 169/388 (43%)
Query: 281 RRDALLPKVLESTVVLDA-QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
+ D LP+ L +S+ G H+ +VT G +F G G+LG G +V
Sbjct: 33 KEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRF 92
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK--VS 397
+ L G I VACG T +T G + + G G LG + H PRK V
Sbjct: 93 TICKPLRGCPIRQVACGWDFTIMLTEKGQVLSCGSNA--FGQLG----VPHG-PRKCVVP 145
Query: 398 GQMEGLQISSIC--CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
+E L+ +C G H A T+ G +F +G G + G ++P + T KE
Sbjct: 146 QAIECLREKVVCVAAGLRHALATTATGSVFQWGTG-LASSGRRLCPGQNLPLFL-TAKEP 203
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
V G+ ++ A+ VAG ++ + +L+ WG GQL + +PL ++
Sbjct: 204 SRVT---GLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHGQLA---SRAVFLPLPQRI 257
Query: 516 S----DDISFCKVACGHSITIALTATGQVFSMGSADYGQLG---SPGSTGKFPTRIEGNI 568
D V G + +A T TG+VF+ G ADYGQLG P K P + ++
Sbjct: 258 EAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGRRLEPPEAQK-PVEQDSSL 316
Query: 569 KHRYIE--------------DIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
+ + +I+CGS H +AV+ K +WG +G G G N T
Sbjct: 317 AFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDKC--CSWGWNEHGMCGDGTESNVWT 374
Query: 614 PTLVEAL--RDKQVKSVVCGSNFTAAIC 639
PT V+AL ++ V CG+ + A+C
Sbjct: 375 PTPVQALPPSPSRLLLVGCGAGHSLAVC 402
Score = 278 (102.9 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 97/314 (30%), Positives = 141/314 (44%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK-LIDALNGSNIHMVACGEFHT 360
+C S+ V+ +F+WG S G+LG G + DV P+ L D I V G H+
Sbjct: 5 SCASE---TVSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHS 61
Query: 361 CAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TA 416
VT GDL+ G DG LGL G E+ + + + G I + CG W T
Sbjct: 62 AVVTDGGDLFVCGLNKDG--QLGL-GHTEEVLRFT---ICKPLRGCPIRQVACG-WDFTI 114
Query: 417 AITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
+T G++ + G FG LG HG R VP+ +E L+E K V + G+ H A
Sbjct: 115 MLTEKGQVLSCGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTATG 172
Query: 475 GKTSGSNGLSS--KKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSIT 531
GL+S ++L G L EP RV L + + C VA G +
Sbjct: 173 SVFQWGTGLASSGRRLCP---GQNLPLFLTAKEPSRVTGL----ENSTAVCAVA-GSDHS 224
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKS 590
+LT TG+++ G +GQL S P RIE + + + + G H+ +
Sbjct: 225 ASLTDTGELYVWGRNKHGQLASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETG 284
Query: 591 EVYTWGKGANGQLG 604
+V+TWG+ GQLG
Sbjct: 285 KVFTWGRADYGQLG 298
Score = 195 (73.7 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 86/290 (29%), Positives = 128/290 (44%)
Query: 360 TCA---VTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
+CA V+ + L+ WG + LGL G ++ ++P+++S + I S+ G H+
Sbjct: 5 SCASETVSAAAVLFAWGANSYGQLGL-GHKEDV--FLPQQLSDFCQAGCIKSVTGGGGHS 61
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
A +T G LF G G LG G + L+ +CG W ++ G
Sbjct: 62 AVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVACG-WDFTIMLTEKG 120
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSIT 531
+ LS G A GQLG HG PR VVP ++ + C VA G
Sbjct: 121 QV-----LSC------GSNAFGQLGVPHG---PRKCVVPQAIECLREKVVC-VAAGLRHA 165
Query: 532 IALTATGQVFSMGS--ADYGQLGSPGS------TGKFPTRIEGNIKHRYIEDIACGSYHI 583
+A TATG VF G+ A G+ PG T K P+R+ G + +A GS H
Sbjct: 166 LATTATGSVFQWGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVA-GSDHS 224
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG 631
A ++ E+Y WG+ +GQL P +EA +D++V +V G
Sbjct: 225 ASLTDTGELYVWGRNKHGQLA-SRAVFLPLPQRIEAHYFQDEKVTAVWSG 273
Score = 187 (70.9 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 66/231 (28%), Positives = 106/231 (45%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
+++A LF +G ++G LG G + +P+++ + + + G +A+V T
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVV-----T 65
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTA 536
G + LF G +GQLG G E + +C K +VACG TI LT
Sbjct: 66 DGGD------LFVCGLNKDGQLGLGHTEEVLRFTIC-KPLRGCPIRQVACGWDFTIMLTE 118
Query: 537 TGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
GQV S GS +GQLG P K P IE ++ + + +A G H ++ V+
Sbjct: 119 KGQVLSCGSNAFGQLGVPHGPRKCVVPQAIEC-LREKVV-CVAAGLRHALATTATGSVFQ 176
Query: 595 WGKG--ANGQ-LGHGDNE----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
WG G ++G+ L G N + P+ V L + V GS+ +A++
Sbjct: 177 WGTGLASSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASL 227
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 46/187 (24%), Positives = 76/187 (40%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVACGEFHTC 361
GS H+ +T G+++ WG G+L + P+ I+A + V G H
Sbjct: 220 GSDHSASLTDTGELYVWGRNKHGQLASRA-VFLPLPQRIEAHYFQDEKVTAVWSGWTHLV 278
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS------------SI 408
A T +G ++TWG + LG + E + + S +G Q S I
Sbjct: 279 AKTETGKVFTWGRADYGQLGRRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEI 338
Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWH 466
CG H A+ K ++G G G G S+ P V+ L + ++ CG H
Sbjct: 339 SCGSEHNLAVIR-DKCCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGH 397
Query: 467 TAAIVEV 473
+ A+ ++
Sbjct: 398 SLAVCQL 404
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 213 (80.0 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 75/273 (27%), Positives = 122/273 (44%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
+++WG+G G H + D YP L N+ ++ G H+ A+ ++ + WG+
Sbjct: 4 LYTWGKGKTGNTCHNI--DKKYPSPPSVLISLNLDQLSMGPNHSAAI-VNNECLMWGE-- 58
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
++G+ H K+ + ++ S+ CG HT +TS K+F+ G G LG
Sbjct: 59 ----VMGR----KHTTLFKIVWKR---RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLG 107
Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
+ ++VP V+TL + + G +AAI E AG L+ WG A
Sbjct: 108 IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITE-AGD-----------LYCWGSSAY 155
Query: 497 GQLGHG--DAE-----PRVV--PLCVKVSDD------ISFCKVACGHSITIALTATGQVF 541
GQLG+G +A+ P + PL D + + + G TIA++ TG +F
Sbjct: 156 GQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIF 215
Query: 542 SMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
S GS YGQLG K P ++ + + R
Sbjct: 216 SWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERR 248
Score = 199 (75.1 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
S++CG H +L+T + +IFS G G+LG D + P +D L+ N+ + G
Sbjct: 78 SVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNV 137
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQM-----------EGLQISS 407
+ A+T +GDLY WG + LG +++ + P + + + LQ ++
Sbjct: 138 SAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTN 197
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
IC G HT AI++ G +F++G +G LG G ++ VP
Sbjct: 198 ICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVP 236
Score = 199 (75.1 bits), Expect = 2.9e-10, Sum P(3) = 2.9e-10
Identities = 77/244 (31%), Positives = 115/244 (47%)
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP----------RE-- 448
+ LQ ++IC G HT AI++ G +F++G +G LG G ++ VP R
Sbjct: 191 QNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAG 250
Query: 449 -VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEP 506
+ +L E+ T + H +V++A S L+ + LF WG GQLG GD+
Sbjct: 251 HINSLGEIVTTDFTAKTIHRI-VVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLD 309
Query: 507 RVVPLCVKVS-DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK----FP 561
+ VP VK S + + ++A G++ TI LT VF+ GS ++ QLG GK FP
Sbjct: 310 QSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFP 369
Query: 562 TRIEGNIKHRYI-EDI-ACGSYHIAVVSSKSEVYT--WGK-----GANGQLGHGDNENKQ 612
T+I+ K + + DI A G V S V+ G+ GA G G G + N
Sbjct: 370 TQIQ---KPKVMASDIFAAGDCSAYFVLDDSPVHLNLLGQHQLLNGAGGNGGGGGSSNNN 426
Query: 613 TPTL 616
L
Sbjct: 427 NNLL 430
Score = 181 (68.8 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 37/114 (32%), Positives = 61/114 (53%)
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
+ACG FH+ +TL GDL+ WG + G LGQ + +P+ V G +E ++I+ + G
Sbjct: 275 IACGNFHSALLTLEGDLFLWGS--NQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGN 332
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGD---RSSTSVPREVETLKELKTVMASCG 463
HT +T +FTFG F LGHG ++ P +++ K + + + + G
Sbjct: 333 NHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQKPKVMASDIFAAG 386
Score = 150 (57.9 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 47/174 (27%), Positives = 73/174 (41%)
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
+ V SCG HT + S K+F+ G GQLG + VPL V
Sbjct: 75 RVVSVSCGFNHTLLLT------------SEYKIFSMGFNQTGQLGIENVVDSAVPLPVDT 122
Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF----PTRIEGNI--- 568
+ K+ G++++ A+T G ++ GS+ YGQLG+ K PT I +
Sbjct: 123 LSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIPD 182
Query: 569 --------KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
++ +I G+ H +S+ +++WG GQLG G K P
Sbjct: 183 AEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHCNAKLVP 236
Score = 146 (56.5 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID-ALNGSNIHM 352
+V+D IACG+ H+ L+T +G +F WG G+LG G D S PK + +L I+
Sbjct: 271 IVVD---IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINR 327
Query: 353 VACGEFHTCAVTLSGDLYTWGDG-IHNLG 380
+A G HT +T D++T+G + LG
Sbjct: 328 MALGNNHTILLTKEQDVFTFGSNEFYQLG 356
Score = 138 (53.6 bits), Expect = 1.3e-19, Sum P(4) = 1.3e-19
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
+ACG+ + LT G +F GS YGQLG S + P ++G+++ I +A G+ H
Sbjct: 275 IACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNH 334
Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQT---PTLVE 618
+++ + +V+T+G QLGHG K PT ++
Sbjct: 335 TILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQ 373
Score = 132 (51.5 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 24/76 (31%), Positives = 45/76 (59%)
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE-ALRDKQVKSV 628
HR + DIACG++H A+++ + +++ WG GQLG GD+ ++ P V+ +L ++ +
Sbjct: 269 HRIVVDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRM 328
Query: 629 VCGSNFTAAICLHKGV 644
G+N T + + V
Sbjct: 329 ALGNNHTILLTKEQDV 344
Score = 93 (37.8 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 28/115 (24%), Positives = 56/115 (48%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADV-SY-- 338
D+ +P +++ + I G+ + +T+ G ++ WG + G+LG+G + A + S+
Sbjct: 113 DSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTP 172
Query: 339 -----PKLIDALNGSNIHM------VACGEFHTCAVTLSGDLYTWGDGIHN-LGL 381
P + DA I+ + G HT A++ +G +++WG + LGL
Sbjct: 173 TTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGL 227
Score = 77 (32.2 bits), Expect = 1.3e-11, Sum P(4) = 1.3e-11
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
L +I G++H + ++ G IFSWG G+LG G
Sbjct: 193 LQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLG 228
Score = 57 (25.1 bits), Expect = 7.4e-22, Sum P(3) = 7.4e-22
Identities = 35/139 (25%), Positives = 63/139 (45%)
Query: 733 VTEKENMNSRSATDGQS-KPKGKSYHASPSLNGKFQWEPNSD---FIKSNKISASPP--G 786
+T K++ +S+S QS K + + SPS + + P D F + +++ + G
Sbjct: 1564 ITPKQSPSSKSI---QSLKNESEFICVSPSSPSRVLFNPIFDKSFFEQKHRVVNTDIVLG 1620
Query: 787 SRRVSRAP--SPISRKSSPACSITMNSFTDLANSEVIFEYSKQTND-NFNQEPDVLRAQL 843
S + S P SPI +S S T ++ NS + +TN N N + D +L
Sbjct: 1621 SHKRSSPPVISPIGEFNSTTNSTTNSTTNSTTNSNS--NINTKTNAINNNNKSDRELDKL 1678
Query: 844 EDLTRKSQFLEVELERTSR 862
+ + S F+ ++ +SR
Sbjct: 1679 KTKSGGSSFINIKSANSSR 1697
Score = 55 (24.4 bits), Expect = 1.2e-21, Sum P(3) = 1.2e-21
Identities = 28/124 (22%), Positives = 49/124 (39%)
Query: 708 NTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQ 767
N +E G+ + I N++ N + N+ + +S+ + + SP+L
Sbjct: 1002 NNNNEVGNINNINNNNNNN-NNSNDINNNSNLIIEKEINNKSQQQQEEETNSPNL----- 1055
Query: 768 WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQ 827
+P + SN + PP S +S + + +S S M S N + E
Sbjct: 1056 -QPTDN---SNSTNTRPPSSSLLSSVINSLETATS-IDSPPMFSLNSDDNVDSSMENRNF 1110
Query: 828 TNDN 831
TNDN
Sbjct: 1111 TNDN 1114
Score = 50 (22.7 bits), Expect = 3.9e-21, Sum P(3) = 3.9e-21
Identities = 24/94 (25%), Positives = 41/94 (43%)
Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG 725
H N +V L S K+S ++P I + + + T S + SNS I ++
Sbjct: 1610 HRVVNTDIV---LGSHKRSSPPVISP-IGE-FNSTTNSTTNSTTNSTTNSNSNINTKTNA 1664
Query: 726 LFQNCKRVTEKENMNSRSATDGQSKPKGKSYHAS 759
+ N K E + + ++S G S KS ++S
Sbjct: 1665 INNNNKSDRELDKLKTKSG--GSSFINIKSANSS 1696
Score = 48 (22.0 bits), Expect = 6.3e-21, Sum P(3) = 6.3e-21
Identities = 22/128 (17%), Positives = 49/128 (38%)
Query: 708 NTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQ 767
N+ + S +N+ I NS+ N N N+ + T+ + + + + + N
Sbjct: 1315 NSVNNSNNNNSINNNSNN--NNNNNTNNNNNTNNNNNTNNNNNNNNNNNNNNNNNNNNNN 1372
Query: 768 WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQ 827
N++ +N + + + + S ++S I + + D+ N + Q
Sbjct: 1373 NNNNNNNNNNNNNNNNNNNNNNSDKNSD--SEEASIGSGI-LGNIDDIQNIIGNIKNGDQ 1429
Query: 828 TNDNFNQE 835
N N N +
Sbjct: 1430 VNKNLNHK 1437
Score = 46 (21.3 bits), Expect = 1.6e-20, Sum P(4) = 1.6e-20
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 771 NSDF-IKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTN 829
NS+ K+N I+ + R + + + KS + I + S N+ +I+ + +
Sbjct: 1655 NSNINTKTNAINNNNKSDRELDK----LKTKSGGSSFINIKSANSSRNNSMIYHSIENRH 1710
Query: 830 DNFNQE 835
+N+N +
Sbjct: 1711 NNYNSD 1716
Score = 44 (20.5 bits), Expect = 1.6e-20, Sum P(4) = 1.6e-20
Identities = 11/46 (23%), Positives = 21/46 (45%)
Query: 705 IKLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSK 750
IKLN + + +N+ N++ N N N+ + +G +K
Sbjct: 949 IKLNNNNNNNNNNNNNNNNNN--NNNNNNNNNNNNNNNNNNNGDNK 992
Score = 41 (19.5 bits), Expect = 3.3e-20, Sum P(4) = 3.3e-20
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 709 TTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLN 763
T+S++ +NS + N S + ++ + S SA D S K S H LN
Sbjct: 899 TSSDTSTNSGVTLNDSPMIRSILKNNAINKRLSFSAEDIHSV-KVLSNHRKIKLN 952
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 181 (68.8 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 54/160 (33%), Positives = 78/160 (48%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G ++ALTA QV+S GS
Sbjct: 526 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALTAKSQVYSWGSN 585
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS-YHIAVVSSKSEVYTWGKGANGQL-- 603
+GQLG P R+ + +A G Y + +V + E + G +G+
Sbjct: 586 TFGQLGHYDFPTTVP-RLAKVSSENGVWSVAAGQDYSLFLVDT--EDFQPGLYYSGRQDP 642
Query: 604 GHGDN--ENK---QTPTLVEALRDKQVKSVVCGSNFTAAI 638
GDN EN +TP L+ + + V G + A+
Sbjct: 643 AEGDNLPENHSGTKTPVLLSCSKLGYISRVTAGKDSYLAL 682
Score = 171 (65.3 bits), Expect = 7.5e-22, Sum P(2) = 7.5e-22
Identities = 51/176 (28%), Positives = 84/176 (47%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G KH VL+T+ G+++S+G E S P L +AL G + VA G FH
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPWRS--EPAEICPSCPILENALIGQFVVTVASGSFHNG 104
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS----GQMEGLQISSICCGPWHTAA 417
AVT SG Y WG+ + + P +S + ++I + CG HT A
Sbjct: 105 AVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDSETSSLLAVRILQLACGEEHTLA 164
Query: 418 ITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
++ + +++ +G G LG + + P++VE L + +CG +H+ A+V+
Sbjct: 165 LSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 154 (59.3 bits), Expect = 4.5e-20, Sum P(2) = 4.5e-20
Identities = 41/138 (29%), Positives = 70/138 (50%)
Query: 289 VLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI---DA 344
+LE+ ++ ++A GS H VT+ G + WGE S G+ + V P + D+
Sbjct: 83 ILENALIGQFVVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVSISDS 142
Query: 345 LNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
S I +ACGE HT A+++S +++ WG G LGL+ ++ P+KV +
Sbjct: 143 ETSSLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTTFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAI 418
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
Score = 134 (52.2 bits), Expect = 0.00013, P = 0.00013
Identities = 34/114 (29%), Positives = 57/114 (50%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 500 RVKTRTVVLTPTY--SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 557
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQ 399
+ + G +H+ A+T +Y+WG + G LG + +PR KVS +
Sbjct: 558 KEVIYLEAGGYHSLALTAKSQVYSWGS--NTFGQLGHY-DFPTTVPRLAKVSSE 608
Score = 129 (50.5 bits), Expect = 0.00046, P = 0.00046
Identities = 49/193 (25%), Positives = 78/193 (40%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
G L L G +S++S + RK + + + ++ G + +++T+G G G
Sbjct: 477 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 536
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD P V+ L + + G +H+ A+ + ++++WG
Sbjct: 537 QLGHGDVLPRLQPLCVKCLDGKEVIYLEAGGYHSLALT------------AKSQVYSWGS 584
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
GQLGH D P VP KVS + VA G ++ L T + F G Y
Sbjct: 585 NTFGQLGHYDF-PTTVPRLAKVSSENGVWSVAAGQDYSLFLVDT-EDFQPGLY-YSGRQD 641
Query: 554 PGSTGKFPTRIEG 566
P P G
Sbjct: 642 PAEGDNLPENHSG 654
Score = 112 (44.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 49/189 (25%), Positives = 81/189 (42%)
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
L +++ SC +A V VA T + LS KK+ + A + G + P +K
Sbjct: 391 LNSLVVSCA---SAVGVRVAA-TYEAGALSLKKVMNFYSTAPCEPGTQAGSSSIGPEGLK 446
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI---EGNIKHR 571
S + + + + +L + S G + +L PG + R+ +K R
Sbjct: 447 DSREEQVKQESMQGKKSSSLVDIREEESEGGSR--RLSLPGLLSQVSPRLLRKAARVKTR 504
Query: 572 YI--EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
+ G + S ++EV+TWGKG GQLGHGD + P V+ L K+V +
Sbjct: 505 TVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYLE 564
Query: 630 CGSNFTAAI 638
G + A+
Sbjct: 565 AGGYHSLAL 573
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 289 (106.8 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 72/250 (28%), Positives = 119/250 (47%)
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETL 452
R + G +E Q+ I CG H+ A+T+ G+LF +G+ G LG +++ T P+ +++L
Sbjct: 108 RPLKG-LENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPQHLQSL 166
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
CG+ A + G S LS +F WG + GQLG GD R +P
Sbjct: 167 ---------CGI--PVAQISAGGNHSFVLSLSGV-VFGWGSNSAGQLGLGDTTDRFIPTI 214
Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
VK ++CG T L+ G VF+ GS +GQLG + R+ +
Sbjct: 215 VKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSK 274
Query: 573 IEDIACGSYHIAVVS-SKSEVYTWGKGANGQLGHGDNENKQTPT---LVEALRDKQVKSV 628
+ + CG +H V S +++Y++G G GQLG+G+ + P L + ++ +
Sbjct: 275 VSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKL 334
Query: 629 VCGSNFTAAI 638
+ G N + A+
Sbjct: 335 IAGENHSFAL 344
Score = 246 (91.7 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 74/257 (28%), Positives = 119/257 (46%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+SI CG AVL+ G++ + + V P + L + +ACG+
Sbjct: 80 RSIVCGEAGAVLLADDGKVLVMDQST-----------VCRP--LKGLENRQVIQIACGDQ 126
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLG-QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H+ A+T G L+ WG+ LG LG + + P+ + + G+ ++ I G H+
Sbjct: 127 HSMALTNDGQLFVWGENA--LGQLGLRKEQAGTQSPQHLQS-LCGIPVAQISAGGNHSFV 183
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
++ +G +F +G + G LG GD + +P V++L KTV SCG HTA + + G T
Sbjct: 184 LSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSK--GGT 241
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-A 536
+FT+G G GQLGH + P V +V CG T+ +
Sbjct: 242 ----------VFTFGSGGFGQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFEDS 291
Query: 537 TGQVFSMGSADYGQLGS 553
+ Q++S G GQLG+
Sbjct: 292 SNQIYSFGCGMQGQLGN 308
Score = 239 (89.2 bits), Expect = 3.6e-16, P = 3.6e-16
Identities = 52/164 (31%), Positives = 87/164 (53%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P+ L+S + I+ G H+ +++ G +F WG S G+LG G D P ++ +L+
Sbjct: 160 PQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLS 219
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
G ++CG HT ++ G ++T+G G G LG S PR V+ ++ G ++S
Sbjct: 220 GKKTVSISCGGEHTATLSKGGTVFTFGSG--GFGQLGHNSLKDEHHPRLVA-ELWGSKVS 276
Query: 407 SICCGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
+ CG HT S+ ++++FG G G LG+G++ SVP V
Sbjct: 277 QVTCGRHHTLVFEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPV 320
Score = 214 (80.4 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 57/194 (29%), Positives = 95/194 (48%)
Query: 443 TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-H 501
++V R ++ L+ + + +CG H+ A+ ++G +LF WG+ A GQLG
Sbjct: 104 STVCRPLKGLENRQVIQIACGDQHSMALT--------NDG----QLFVWGENALGQLGLR 151
Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
+ P ++ I +++ G + + L+ +G VF GS GQLG +T +F
Sbjct: 152 KEQAGTQSPQHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI 211
Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
I ++ + I+CG H A +S V+T+G G GQLGH +++ P LV L
Sbjct: 212 PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAELW 271
Query: 622 DKQVKSVVCGSNFT 635
+V V CG + T
Sbjct: 272 GSKVSQVTCGRHHT 285
Score = 181 (68.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 38/118 (32%), Positives = 61/118 (51%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
D D +P +++S SI+CG +H ++K G +F++G G G+LGH D +P
Sbjct: 205 DTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHP 264
Query: 340 KLIDALNGSNIHMVACGEFHTCAVT-LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
+L+ L GS + V CG HT S +Y++G G+ G LG ++ +P V
Sbjct: 265 RLVAELWGSKVSQVTCGRHHTLVFEDSSNQIYSFGCGMQ--GQLGNGEQVKQSVPLPV 320
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 270 (100.1 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 95/352 (26%), Positives = 162/352 (46%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHT 360
+C H T+ G + + G+G G+LG G + P L+ ++ G HT
Sbjct: 39 SCQVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHT 96
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
++ SG +Y++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+
Sbjct: 97 VCLSKSGQVYSFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAAL 151
Query: 419 TSAGKLFTFGD--GTFGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIV---E 472
T G++F +G G +G + S VP +V+ ++ V + G H + +
Sbjct: 152 TDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLTADGD 209
Query: 473 VAGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD-----DISFCKVA 525
+ G G + +LF G +G E +VP CV + + F
Sbjct: 210 LYTLGCGEQGQLGRVPELFANRGGRQG------LERLLVPKCVMLKSRGSRGHVRFQDAF 263
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYH 582
CG T A++ G V+ G ++Y QLG+PG+ F P + N ++ + G +H
Sbjct: 264 CGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWV-GFSGGQHH 322
Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSN 633
+ S+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++
Sbjct: 323 TVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGAS 372
Score = 195 (73.7 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 79/312 (25%), Positives = 138/312 (44%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVS 337
+R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 73 ERKKPALVSIPEDVVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 127
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKV 396
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 128 VPGKVELQE--KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 185
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKE 454
Q++ + + + G H +T+ G L+T G G G LG ++ + +E L
Sbjct: 186 --QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 242
Query: 455 LKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVP-- 510
K VM S G + + +S + ++ +G QLG E +P
Sbjct: 243 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQN 302
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGK-FPTRIEGNI 568
L + S+ + G T+ + + G+ +S+G A+YG+LG G+ K PT I
Sbjct: 303 LTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS--- 359
Query: 569 KHRYIEDIACGS 580
+ + +ACG+
Sbjct: 360 RLPAVSSVACGA 371
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 179 (68.1 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 42/103 (40%), Positives = 58/103 (56%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++++WG G +GQLGHGD PR+ P CVK + KVA G ++ALTA QVFS G
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCN 609
Query: 547 DYGQLGSPGSTGKFP--TRIEGNIKHRYIEDIACGSYHIAVVS 587
GQLG S FP T++ I+ + DI G H +++
Sbjct: 610 TSGQLGHMESPTTFPQLTKLSDGIR---VWDIGAGLQHTLLLA 649
Score = 177 (67.4 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 59/191 (30%), Positives = 98/191 (51%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+VL S VL A A G++H VL+ + GQ++S+GE K A+ P L L+
Sbjct: 33 RVLLSRPVLQA---ALGARHGVLLVEGGQVYSFGE-LPWKQNQTSSAE---PILEAVLSE 85
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKV----SGQMEG 402
+ VA G H+ VT G ++ WG+ +H GLLG +S I + P V + +
Sbjct: 86 QRVVFVAAGSAHSGVVTEDGGVHMWGENVHGQCGLLG-LSVIPNPTPVGVLDSEATPPQT 144
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMA 460
++I + CG HT A+++ +++ +G G LG + S+ V P++V+ L +
Sbjct: 145 VKILEVACGDQHTLALSAKHEVWAWGSGC--QLGL-NTSTFPVWKPQKVDHLSGRHVLQV 201
Query: 461 SCGVWHTAAIV 471
+CG H+ A+V
Sbjct: 202 ACGSAHSVALV 212
Score = 153 (58.9 bits), Expect = 4.9e-19, Sum P(3) = 4.9e-19
Identities = 46/144 (31%), Positives = 71/144 (49%)
Query: 283 DALLPKVL-ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE---GSGGKLGHGVEADVSY 338
+ +L VL E VV +A GS H+ +VT+ G + WGE G G LG V + +
Sbjct: 76 EPILEAVLSEQRVVF----VAAGSAHSGVVTEDGGVHMWGENVHGQCGLLGLSVIPNPTP 131
Query: 339 PKLID--ALNGSNIHM--VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
++D A + + VACG+ HT A++ +++ WG G LGL S W P+
Sbjct: 132 VGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWGSGCQ-LGL--NTSTFPVWKPQ 188
Query: 395 KVSGQMEGLQISSICCGPWHTAAI 418
KV + G + + CG H+ A+
Sbjct: 189 KVD-HLSGRHVLQVACGSAHSVAL 211
Score = 143 (55.4 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
A L + Q +++SWG+G G+LGHG P + +LNG + VA G H+ A+T
Sbjct: 542 AHLPSLQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQS 601
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
+++WG + G LG + E P+ ++ +G+++ I G HT
Sbjct: 602 QVFSWG--CNTSGQLGHM-ESPTTFPQ-LTKLSDGIRVWDIGAGLQHT 645
Score = 129 (50.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 61/226 (26%), Positives = 97/226 (42%)
Query: 373 GDGIHNLGLLGQVSEISH-WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
GD GLL S+ P +V LQ + G H + G++++FG+
Sbjct: 10 GDSSGERGLLHTWKGYSYSTAPERVLLSRPVLQAA---LGARHGVLLVEGGQVYSFGELP 66
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
+ +++S++ P L E + V + G H+ + E G + W
Sbjct: 67 WKQ----NQTSSAEPILEAVLSEQRVVFVAAGSAHSGVVTEDGG------------VHMW 110
Query: 492 GDGAEGQLGH-G-DAEPRVVPLCVKVSD-----DISFCKVACGHSITIALTATGQVFSMG 544
G+ GQ G G P P+ V S+ + +VACG T+AL+A +V++ G
Sbjct: 111 GENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAKHEVWAWG 170
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYH-IAVV 586
S QLG ST FP + H R++ +ACGS H +A+V
Sbjct: 171 SGC--QLGLNTST--FPVWKPQKVDHLSGRHVLQVACGSAHSVALV 212
Score = 112 (44.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S ++EV++WG+G +GQLGHGD + P V++L K+V V G++ + A+
Sbjct: 546 SLQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLAL 597
Score = 101 (40.6 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 19/67 (28%), Positives = 37/67 (55%)
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+V+S G GQLG + ++ + + +A G++H ++++S+V++WG
Sbjct: 550 EVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVLKVAAGAHHSLALTAQSQVFSWGCN 609
Query: 599 ANGQLGH 605
+GQLGH
Sbjct: 610 TSGQLGH 616
Score = 43 (20.2 bits), Expect = 1.7e-21, Sum P(3) = 1.7e-21
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 784 PPGSRRVSRAPSPISRKSS 802
PP + RA PISR +S
Sbjct: 1047 PPSTGMTQRADPPISRTAS 1065
Score = 40 (19.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 301 IACGSKHAVLVTK 313
+ACGS H+V + +
Sbjct: 201 VACGSAHSVALVR 213
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 277 (102.6 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 100/351 (28%), Positives = 166/351 (47%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ L ++ G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTEDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
+F R + V + L+ +K M V A +V+VA L++
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGD 192
Query: 488 LFTWGDGAEGQLGH--------GDAEPR---VVPLCVKVSDD-----ISFCKVACGHSIT 531
L+T G G +GQLG G + +VP CV + + F CG T
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFT 252
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYHIAVVSS 588
A++ G V+ G ++Y QLG+PG+ F P + N ++ + G +H + S
Sbjct: 253 FAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWV-GFSGGQHHTVCMDS 311
Query: 589 KSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAV 360
Score = 259 (96.2 bits), Expect = 2.6e-19, P = 2.6e-19
Identities = 105/383 (27%), Positives = 169/383 (44%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVSY 338
++ AL+P +L+ V +A G H V +++ GQ++S+G G LG VE
Sbjct: 58 KKPALVP-LLQDVVQAEA-----GGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMV 111
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKVS 397
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 112 PGKVELQE--KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV- 168
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH--------GDRSSTS---VP 446
Q++ + + G H +T+ G L+T G G G LG G R VP
Sbjct: 169 -QLDA-PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVP 226
Query: 447 REV-----ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
R V T ++ A CG + T AI G G GLS+ QLG
Sbjct: 227 RCVLLKSRGTRGRVRFQDAFCGAYFTFAISR-EGHVYGF-GLSNYH----------QLGT 274
Query: 502 GDAEPRVVP--LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTG 558
+P L + S+ + G T+ + + G+ +S+G A+YG+LG G+
Sbjct: 275 PGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE 334
Query: 559 K-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
K PT I + + +ACG+ VS V+ WG G N QLG G +E+ +P +
Sbjct: 335 KSIPTLIS---RLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEM 391
Query: 618 --EALRDKQVKSVVCGSNFTAAI 638
+ L ++ V +V G T +
Sbjct: 392 TGKQLENRVVLTVSSGGQHTVLL 414
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 55/198 (27%), Positives = 93/198 (46%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
H + T G + T G G G LG G+ P V L+++ V A G HT + +
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLSQ 84
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSI 530
SG +++++G EG LG + +VP V++ + + +V+ G S
Sbjct: 85 -----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSH 130
Query: 531 TIALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
T ALT G+VF GS + G +G P P +++ + + +A G+ H+ ++
Sbjct: 131 TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDAP---VVKVASGNDHLVML 187
Query: 587 SSKSEVYTWGKGANGQLG 604
++ ++YT G G GQLG
Sbjct: 188 TNDGDLYTLGCGEQGQLG 205
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 277 (102.6 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 100/351 (28%), Positives = 165/351 (47%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ L ++ G HT + SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLNQSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTEDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
+F R + V + L+ +K M V +V+VA L++
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGD 192
Query: 488 LFTWGDGAEGQLGH--------GDA---EPRVVPLCVKVSDD-----ISFCKVACGHSIT 531
L+T G G +GQLG G E +VP CV + + F CG +T
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLT 252
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYHIAVVSS 588
A++ G V+ G ++Y QLG+PG+ F P + N ++ + G +H + S
Sbjct: 253 FAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWV-GFSGGQHHTICMDS 311
Query: 589 KSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAV 360
Score = 258 (95.9 bits), Expect = 3.5e-19, P = 3.5e-19
Identities = 98/375 (26%), Positives = 166/375 (44%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVSY 338
++ AL+P +L+ V +A G H V + + GQ++S+G G LG VE
Sbjct: 58 KKPALVP-LLQDVVQAEA-----GGMHTVCLNQSGQVYSFGCNDEGALGRDTSVEGSEMV 111
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKVS 397
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 112 PGKVELQE--KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQ 169
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKEL 455
M ++++S G H +T+ G L+T G G G LG ++ + +E L
Sbjct: 170 LDMPVVKVAS---GNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG--QLGHGDAEPRVVP--L 511
K V+ + A + S++ +G G QLG +P L
Sbjct: 227 KCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNL 286
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGK-FPTRIEGNIK 569
+ S+ + G TI + + G+ +S+G A+YG+LG G+ K PT I +
Sbjct: 287 TSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS---R 343
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV--EALRDKQVKS 627
+ +ACG+ VS V+ WG G N QLG G +E+ +P + + L ++ V +
Sbjct: 344 LPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLT 403
Query: 628 VVCGSNFTAAICLHK 642
V G T + K
Sbjct: 404 VSSGGQHTVLLVKDK 418
Score = 147 (56.8 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 55/198 (27%), Positives = 94/198 (47%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
H + T G + T G G G LG G+ P V L+++ V A G HT + +
Sbjct: 27 HRSHKTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLNQ 84
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSI 530
SG +++++G EG LG + +VP V++ + + +V+ G S
Sbjct: 85 -----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSH 130
Query: 531 TIALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
T ALT G+VF GS + G +G P P +++ ++ + +A G+ H+ ++
Sbjct: 131 TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDMP---VVKVASGNDHLVML 187
Query: 587 SSKSEVYTWGKGANGQLG 604
++ ++YT G G GQLG
Sbjct: 188 TTDGDLYTLGCGEQGQLG 205
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 185 (70.2 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 54/160 (33%), Positives = 80/160 (50%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G ++ALTA QV+S GS
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALTAKSQVYSWGSN 590
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS-YHIAVVSSKSEVYTWGKGANGQLG- 604
+GQLG P + N ++ + +A G Y + +V + E + G +G+L
Sbjct: 591 TFGQLGHSDFPTTVPRLAKVNSENG-VWSVAAGQDYSLFLVDT--EDFQPGLCYSGRLDP 647
Query: 605 -HGDN--ENK---QTPTLVEALRDKQVKSVVCGSNFTAAI 638
GDN EN + P L+ + + V G + A+
Sbjct: 648 TEGDNLPENHSGTKMPVLLSCSKLGYISRVTAGKDSYLAL 687
Score = 162 (62.1 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 44/138 (31%), Positives = 70/138 (50%)
Query: 289 VLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI---DA 344
+LES +V ++A GS H VT G ++ WGE S G+ + V P + D+
Sbjct: 88 ILESALVGQYVVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDS 147
Query: 345 ----LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
L I +ACGE HT A++LS +++ WG G LGL+ ++ P+KV +
Sbjct: 148 ETSPLLAVRILQLACGEEHTLALSLSREIWAWGTGCQ-LGLITTTFPVTK--PQKVE-HL 203
Query: 401 EGLQISSICCGPWHTAAI 418
G + + CG +H+ A+
Sbjct: 204 AGRVVLQVACGAFHSLAL 221
Score = 160 (61.4 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 53/183 (28%), Positives = 89/183 (48%)
Query: 302 ACGSKHAVLVTK-----QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
A G KH VL+T+ G+++S+G E S P L AL G + VA G
Sbjct: 47 ALGVKHGVLLTEVFKPSDGEVYSFGTLPWRS--EPAETCPSNPILESALVGQYVVTVATG 104
Query: 357 EFHTCAVTLSGDLYTWGDG------IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
FHT AVT SG +Y WG+ + N + + + +S I + + ++I + C
Sbjct: 105 SFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVS--ISDSETSPLLAVRILQLAC 162
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAA 469
G HT A++ + +++ +G G LG + + P++VE L + +CG +H+ A
Sbjct: 163 GEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGAFHSLA 220
Query: 470 IVE 472
+V+
Sbjct: 221 LVQ 223
Score = 135 (52.6 bits), Expect = 0.00010, P = 0.00010
Identities = 34/114 (29%), Positives = 58/114 (50%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 505 RVKTRTVVLTPTY--SGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 562
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQ 399
+ + G +H+ A+T +Y+WG + G LG S+ +PR KV+ +
Sbjct: 563 KEVIHLEAGGYHSLALTAKSQVYSWGS--NTFGQLGH-SDFPTTVPRLAKVNSE 613
Score = 133 (51.9 bits), Expect = 0.00017, P = 0.00017
Identities = 49/193 (25%), Positives = 80/193 (41%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
G L L G +S++S + RK + + + ++ G + +++T+G G G
Sbjct: 482 GSRRLSLPGLLSQVSPRLLRKAARVKTRTVVLTPTYSGEADALLPSLRTEVWTWGKGKEG 541
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD P V+ L + + G +H+ A+ + ++++WG
Sbjct: 542 QLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGYHSLALT------------AKSQVYSWGS 589
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
GQLGH D P VP KV+ + VA G ++ L T + F G G+L
Sbjct: 590 NTFGQLGHSDF-PTTVPRLAKVNSENGVWSVAAGQDYSLFLVDT-EDFQPGLCYSGRL-D 646
Query: 554 PGSTGKFPTRIEG 566
P P G
Sbjct: 647 PTEGDNLPENHSG 659
Score = 128 (50.1 bits), Expect = 0.00059, P = 0.00059
Identities = 36/114 (31%), Positives = 57/114 (50%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
GE +L +++TWG G G LG + P V ++G ++ + G +H+
Sbjct: 519 GEADALLPSLRTEVWTWGKGKE--GQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGYHS 575
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
A+T+ +++++G TFG LGH D T+VPR L V + GVW AA
Sbjct: 576 LALTAKSQVYSWGSNTFGQLGHSD-FPTTVPR-------LAKVNSENGVWSVAA 621
Score = 112 (44.5 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 49/189 (25%), Positives = 82/189 (43%)
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
L +++ SC +A V VA T + LS KK+ + + A + G + P +K
Sbjct: 396 LNSLVVSCA---SAVGVRVAA-TYEAGALSLKKVMNFYNTAPCEPGALAGSSSIGPEGLK 451
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI---EGNIKHR 571
S + + + + +L + S G + +L PG + R+ +K R
Sbjct: 452 DSREEQVKQESMQGKKSSSLVDIREEESEGGSR--RLSLPGLLSQVSPRLLRKAARVKTR 509
Query: 572 YI--EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
+ G + S ++EV+TWGKG GQLGHGD + P V+ L K+V +
Sbjct: 510 TVVLTPTYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLE 569
Query: 630 CGSNFTAAI 638
G + A+
Sbjct: 570 AGGYHSLAL 578
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 276 (102.2 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 100/351 (28%), Positives = 165/351 (47%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ L ++ G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTEDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
+F R + V + L+ +K M V +V+VA L++
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGD 192
Query: 488 LFTWGDGAEGQLGH--------GDA---EPRVVPLCVKVSDD-----ISFCKVACGHSIT 531
L+T G G +GQLG G E +VP CV + + F CG T
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFT 252
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYHIAVVSS 588
A++ G V+ G ++Y QLG+PG+ F P + N ++ + G +H + S
Sbjct: 253 FAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWV-GFSGGQHHTVCMDS 311
Query: 589 KSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAV 360
Score = 265 (98.3 bits), Expect = 5.3e-20, P = 5.3e-20
Identities = 106/387 (27%), Positives = 171/387 (44%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVSY 338
++ AL+P +L+ V +A G H V +++ GQ++S+G G LG VE
Sbjct: 58 KKPALVP-LLQDVVQAEA-----GGMHTVCLSQSGQVYSFGCNDEGALGRDTSVEGSEMV 111
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKVS 397
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 112 PGKVELQE--KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV- 168
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH--------GDRSSTS---VP 446
Q++ Q+ + G H +T+ G L+T G G G LG G R VP
Sbjct: 169 -QLD-TQVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVP 226
Query: 447 REV-----ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
R V T ++ A CG + T AI G G GLS+ QLG
Sbjct: 227 RCVLLKSRGTRGRVRFQDAFCGAYFTFAISR-EGHVYGF-GLSNYH----------QLGT 274
Query: 502 GDAEPRVVP--LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTG 558
+P L + S+ + G T+ + + G+ +S+G A+YG+LG G+
Sbjct: 275 PGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE 334
Query: 559 K-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
K PT I + + +ACG+ VS V+ WG G N QLG G ++ +P +
Sbjct: 335 KSIPTLIS---RLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQEDDAWSPVEM 391
Query: 618 --EALRDKQVKSVVCGSNFTAAICLHK 642
+ L +++V +V G T + K
Sbjct: 392 TGKQLENREVLTVSSGGQHTVLLVKDK 418
Score = 148 (57.2 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 55/198 (27%), Positives = 94/198 (47%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVE 472
H + T G + T G G G LG G+ P V L+++ V A G HT + +
Sbjct: 27 HRSHNTEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQDV--VQAEAGGMHTVCLSQ 84
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSI 530
SG +++++G EG LG + +VP V++ + + +V+ G S
Sbjct: 85 -----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSH 130
Query: 531 TIALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
T ALT G+VF GS + G +G P P +++ + + + +A G+ H+ ++
Sbjct: 131 TAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDTQ---VVKVASGNDHLVML 187
Query: 587 SSKSEVYTWGKGANGQLG 604
++ ++YT G G GQLG
Sbjct: 188 TTDGDLYTLGCGEQGQLG 205
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 280 (103.6 bits), Expect = 3.2e-21, P = 3.2e-21
Identities = 91/342 (26%), Positives = 157/342 (45%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFH 359
A G+ +L++ G++++ G+ S G+ +G + V+ P+L+ +L + A G +
Sbjct: 201 AAGAARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYF 260
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T ++ G +YT+ G N G LG +E + PR + G +E + + I G + A+
Sbjct: 261 TAVLSREGKVYTFSWG--NDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALA 318
Query: 420 ---SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGVWHTAAIVEVA 474
+ +++ G G G LGHG R+ PR +E + L+ + + G WH AA+V
Sbjct: 319 CQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWH-AAVV--- 374
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
G +G ++ TWG G G LGHG+ E VP V+ + VA G T +
Sbjct: 375 ----GQDG----RVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVATGDYTTFVV 426
Query: 535 TATGQVFSMGSADYGQLGSPGSTGK---------FPTRIEG--NIKHRYIEDIACGS-Y- 581
+ G V+S G + LG S + PT + + R ++ S Y
Sbjct: 427 SDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQISLTNSIYW 486
Query: 582 --HIAVVSSKSEVYTWGKGANGQLGH--GDNENKQ-TPTLVE 618
H ++ +++ +G G GQLG G N+ ++ P V+
Sbjct: 487 NAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVD 528
Score = 276 (102.2 bits), Expect = 9.0e-21, P = 9.0e-21
Identities = 94/300 (31%), Positives = 145/300 (48%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G H+ AVT G++YT+G +N G LG + V ++G++I G T
Sbjct: 151 GPGHSVAVTSKGEVYTFG--YNNSGQLGHGHTEDEARIQPVRS-LQGVRIIQAAAGAART 207
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEV 473
I+ GK++ G +FG +G + + V P+ V +LK + V A+ G + TA ++
Sbjct: 208 MLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTA-VLSR 266
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGH----GDAEPRVVPLCVKVSDDISFCKVACGHS 529
GK F+WG+ +G+LGH D EPR PL + +++ ++A G+
Sbjct: 267 EGKVY---------TFSWGN--DGRLGHQTEAADVEPR--PLLGPL-ENVPVVQIAAGYC 312
Query: 530 ITIALTA--TGQ-VFSMGSADYGQLGSPGSTG-KFPTRIEG-NIKHRYIEDIACGSYHIA 584
+AL G V+S+G G+LG T K+P IE I + +A G++H A
Sbjct: 313 YLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAA 372
Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV-VCGSNFTAAICLHKG 643
VV V TWG G G LGHG+ E + P +VE L VK+V V ++T + G
Sbjct: 373 VVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGL--SHVKAVHVATGDYTTFVVSDDG 430
Score = 271 (100.5 bits), Expect = 3.2e-20, P = 3.2e-20
Identities = 93/353 (26%), Positives = 160/353 (45%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
+Q++A G H+V VT +G+++++G + G+LGHG D + + + +L G I A G
Sbjct: 146 SQAVA-GPGHSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGA 204
Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
T ++ G +Y G G P+ V+ ++ + + G + TA
Sbjct: 205 ARTMLISDDGKVYACGKESFGEAEYGGQGTKPVTTPQLVTS-LKNIFVVQAAIGNYFTAV 263
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-ETLKELKTVMASCGVWHTAAIVEVAGK 476
++ GK++TF G G LGH ++ PR + L+ + V + G + A+
Sbjct: 264 LSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALA----- 318
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK--VACGHSITIAL 534
NG+S +++ G G G+LGHG P ++ ++ VA G +
Sbjct: 319 -CQPNGMS---VYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVV 374
Query: 535 TATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
G+V + G YG LG + P +EG + H +A G Y VVS +VY
Sbjct: 375 GQDGRVCTWGWGRYGCLGHGNEECESVPKVVEG-LSHVKAVHVATGDYTTFVVSDDGDVY 433
Query: 594 TWGKGANGQLGHGDNENKQ--------TPTLVEALRDKQVKSVVCGSNFTAAI 638
++G G + LGH + ++Q +PT+V +L KQV + + T +I
Sbjct: 434 SFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSL--KQVNERMVQISLTNSI 484
Score = 261 (96.9 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 77/275 (28%), Positives = 131/275 (47%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDAL 345
P+++ S + A G+ +++++G+++++ G+ G+LGH EA DV L+ L
Sbjct: 240 PQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPL 299
Query: 346 NGSNIHMVACGEFHTCAVTL--SG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSG-QME 401
+ +A G + A+ +G +Y+ G G+ G LG S PR + Q+
Sbjct: 300 ENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLG--GKLGHGSRTDEKYPRVIEQFQIL 357
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
LQ + G WH A + G++ T+G G +G LGHG+ SVP+ VE L +K V +
Sbjct: 358 NLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHVKAVHVA 417
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD---D 518
G + T + + S G S+ +G P VV +V++
Sbjct: 418 TGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQVNERMVQ 477
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
IS ++ T ALT +G++F+ G+ D GQLG+
Sbjct: 478 ISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGT 512
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 63/192 (32%), Positives = 96/192 (50%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQS--IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
+ R D P+V+E +L+ Q +A G+ HA +V + G++ +WG G G LGHG E
Sbjct: 337 LGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNE 396
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSE----- 387
S PK+++ L+ VA G++ T V+ GD+Y++G G +LG E
Sbjct: 397 ECESVPKVVEGLSHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRH 456
Query: 388 ---ISHWIPRKVSGQMEGL-QISSICCGPW--HTAAITSAGKLFTFGDGTFGALGH--G- 438
+S + + E + QIS W HT A+T +GKLF FG G G LG G
Sbjct: 457 ANVLSPTVVTSLKQVNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGK 516
Query: 439 DRSSTSVPREVE 450
++ VP +V+
Sbjct: 517 NQKERCVPEKVD 528
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 277 (102.6 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 103/345 (29%), Positives = 154/345 (44%)
Query: 317 IFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-- 373
+F+WG S G+LG G + DV S +L D I + G H+ VT G L+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSLFVCGLN 76
Query: 374 -DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TAAITSAGKLFTFGDGT 431
DG LGL G E+ ++ P K + G I + CG W T +T G++ + G +
Sbjct: 77 KDG--QLGL-GHTEEVLYFTPCK---SLLGCAIQQVACG-WDFTIILTENGQVLSCGSNS 129
Query: 432 FGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
FG LG HG R +P+ +E L+E K V + G+ H +A SG+ +F
Sbjct: 130 FGQLGVPHGPRRCV-IPQAIELLRE-KVVSIAAGLRHA-----LAATASGT-------VF 175
Query: 490 TWGDG--AEGQ-LGHGDAEPRVV----PLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
WG G + G+ L G P + P V ++ V G + +LT G+++
Sbjct: 176 QWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYV 235
Query: 543 MGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
GS +GQL S + P RIE ++ I + G H+ + +V+TWG+ G
Sbjct: 236 WGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYG 295
Query: 602 QLGH------GDNENKQTPTLVEALRDKQVKSVV-CGSNFTAAIC 639
QLG G KQ P+L + K S + C + T C
Sbjct: 296 QLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISC 340
Score = 263 (97.6 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 104/361 (28%), Positives = 162/361 (44%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I G H+ +VT +G +F G G+LG G +V Y +L G I VACG T
Sbjct: 54 ITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFT 113
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQ--ISSICCGPWHTAA 417
+T +G + + G ++ G LG + H R V Q +E L+ + SI G H A
Sbjct: 114 IILTENGQVLSCGS--NSFGQLG----VPHGPRRCVIPQAIELLREKVVSIAAGLRHALA 167
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
T++G +F +G G + G ++P + T KE TV G+ ++ A+ +AG
Sbjct: 168 ATASGTVFQWGTG-LASSGRRLCPGQTLPLFL-TAKEPSTVT---GLENSQAVCVLAGSD 222
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS--DDISFCKVACGHSITIALT 535
++ + +L+ WG GQL A ++P ++ + V G + +A T
Sbjct: 223 HSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQT 281
Query: 536 ATGQVFSMGSADYGQLGSPGST--G----KFPTRIEGNIKHRYIE----------DIACG 579
TG+VF+ G ADYGQLG T G K + G+ + +I+CG
Sbjct: 282 VTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCG 341
Query: 580 SYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S H +AV+ ++WG +G G G + P V LR V CG+ + A+
Sbjct: 342 SEHNLAVIGGVC--HSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLAL 399
Query: 639 C 639
C
Sbjct: 400 C 400
Score = 201 (75.8 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 63/208 (30%), Positives = 98/208 (47%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACG 356
Q +ACG +++T+ GQ+ S G S G+LG HG V P+ I+ L + +A G
Sbjct: 104 QQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCV-IPQAIELLR-EKVVSIAAG 161
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICC---GP 412
H A T SG ++ WG G+ + G L + ++ K + GL+ S C G
Sbjct: 162 LRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGS 221
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H+A++T AG+L+ +G G L + +P+ +E +A+ VW +
Sbjct: 222 DHSASLTDAGELYVWGSNKHGQLA-SQAAFLLLPQRIEARCFQNEKIAA--VWSGWTHL- 277
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
VA +G K+FTWG GQLG
Sbjct: 278 VAQTVTG-------KVFTWGRADYGQLG 298
Score = 185 (70.2 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 67/239 (28%), Positives = 105/239 (43%)
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE---LKTVMASCGVWHTA 468
P + A+ +A LF +G ++G LG G + +++ + +K + G H+A
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGG--HSA 62
Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
+ + GS LF G +GQLG G E + K + +VACG
Sbjct: 63 VVTD-----EGS-------LFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVV 586
TI LT GQV S GS +GQLG P + P IE + + IA G H
Sbjct: 111 DFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIE--LLREKVVSIAAGLRHALAA 168
Query: 587 SSKSEVYTWGKG--ANGQ-LGHGDNE----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
++ V+ WG G ++G+ L G + P+ V L + Q V+ GS+ +A++
Sbjct: 169 TASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASL 227
Score = 181 (68.8 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 72/276 (26%), Positives = 115/276 (41%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEG---SGGKLGHGVEADV-- 336
R ++P+ +E + SIA G +HA+ T G +F WG G SG +L G +
Sbjct: 140 RRCVIPQAIE-LLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFL 198
Query: 337 --SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
P + L S V G H+ ++T +G+LY WG H L Q + + +P+
Sbjct: 199 TAKEPSTVTGLENSQAVCVLAGSDHSASLTDAGELYVWGSNKHGQ-LASQAAFLL--LPQ 255
Query: 395 KVSGQ-MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG--DRSSTSVPREVET 451
++ + + +I+++ G H A T GK+FT+G +G LG R ++ +
Sbjct: 256 RIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPS 315
Query: 452 LKEL--KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
L + SC T A E++ + + + +WG G G G
Sbjct: 316 LPGSGPQKGTPSCLPCLTGA-TEISCGSEHNLAVIGGVCHSWGWNEHGMCGDGTEADVWA 374
Query: 510 PLCVKVSDDISFCKVACG--HSITI----ALTATGQ 539
P V V CG HS+ + AL A GQ
Sbjct: 375 PKPVPGLRFFLGLHVGCGAGHSLALCQLPALPALGQ 410
Score = 169 (64.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 73/258 (28%), Positives = 113/258 (43%)
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
AV + L+ WG + LGL G ++ +++S + I I G H+A +T
Sbjct: 10 AVPTAAALFAWGANSYGQLGL-GHKEDVLS--AQQLSDFCKSGCIKRITGGGGHSAVVTD 66
Query: 421 AGKLFTFG---DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
G LF G DG G LGH + P ++L +CG W I+
Sbjct: 67 EGSLFVCGLNKDGQLG-LGHTEEVLYFTP--CKSLLGCAIQQVACG-WDFTIILT----- 117
Query: 478 SGSNGLSSKKLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIA 533
NG ++ + G + GQLG HG PR V+P +++ + +A G +A
Sbjct: 118 --ENG----QVLSCGSNSFGQLGVPHG---PRRCVIPQAIELLRE-KVVSIAAGLRHALA 167
Query: 534 LTATGQVFSMGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAV 585
TA+G VF G+ A G+ PG T K P+ + G +++ + GS H A
Sbjct: 168 ATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTG-LENSQAVCVLAGSDHSAS 226
Query: 586 VSSKSEVYTWGKGANGQL 603
++ E+Y WG +GQL
Sbjct: 227 LTDAGELYVWGSNKHGQL 244
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 274 (101.5 bits), Expect = 4.6e-21, P = 4.6e-21
Identities = 99/351 (28%), Positives = 164/351 (46%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ ++ G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTDDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
+F R + V + L+ +K M V +V+VA L++
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGD 192
Query: 488 LFTWGDGAEGQLGH--------GDA---EPRVVPLCVKVSD-----DISFCKVACGHSIT 531
L+T G G +GQLG G E +VP CV + + F CG T
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFT 252
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYHIAVVSS 588
A++ G V+ G ++Y QLG+PG+ F P + N ++ + G +H + S
Sbjct: 253 FAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWV-GFSGGQHHTVCMDS 311
Query: 589 KSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PAVSSVACGASVGYAV 360
Score = 263 (97.6 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 98/376 (26%), Positives = 167/376 (44%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVS 337
+R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 56 ERKKPALVSIPEDVVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 110
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKV 396
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 111 VPGKVELQE--KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 168
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKE 454
Q++ + + + G H +T+ G L+T G G G LG ++ + +E L
Sbjct: 169 --QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 455 LKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVP-- 510
K VM S G + + +S + ++ +G QLG E +P
Sbjct: 226 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQN 285
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGK-FPTRIEGNI 568
L + S+ + G T+ + + G+ +S+G A+YG+LG G+ K PT I
Sbjct: 286 LTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLIS--- 342
Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT--LVEALRDKQVK 626
+ + +ACG+ V+ V+ WG G N QLG G +E+ +P + + L ++ V
Sbjct: 343 RLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVL 402
Query: 627 SVVCGSNFTAAICLHK 642
SV G T + K
Sbjct: 403 SVSSGGQHTVLLVKDK 418
Score = 147 (56.8 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 53/197 (26%), Positives = 92/197 (46%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H + T G + T G G G LG G+ + ++ E V A G HT + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DVVQAEAGGMHTVCLSK- 84
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSIT 531
SG +++++G EG LG + +VP V++ + + +V+ G S T
Sbjct: 85 ----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSHT 131
Query: 532 IALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
ALT G+VF GS + G +G P P +++ ++ + +A G+ H+ +++
Sbjct: 132 AALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLT 188
Query: 588 SKSEVYTWGKGANGQLG 604
+ ++YT G G GQLG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 284 (105.0 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 77/315 (24%), Positives = 137/315 (43%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G IH
Sbjct: 369 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQ 428
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +VS P +++ + + + CG
Sbjct: 429 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSN-PVEQVSCGD 487
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P+ V+ K L V CG T + +
Sbjct: 488 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 547
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHS 529
+GK GL+ G + H ++ +SF K+ A G +
Sbjct: 548 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKT 605
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSS 588
T A+ G++ + G GQLG + + G + + + ++CG +
Sbjct: 606 HTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 665
Query: 589 KSEVYTWGKGANGQL 603
+ ++ WG G NG+L
Sbjct: 666 DNHIFAWGNGGNGRL 680
Score = 273 (101.2 bits), Expect = 7.3e-20, P = 7.3e-20
Identities = 96/352 (27%), Positives = 151/352 (42%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 338 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 385
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 386 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIHQVSCGDDFTVCVTDE 442
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G S V P ++ SCG H +
Sbjct: 443 GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 495
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 496 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK 550
Query: 540 VFSMGSADYGQLG-SPGSTG--------KFPTRIEGNIKHR---Y-IEDIACGSYHIAVV 586
V + G ++ +LG + +G + P + + Y I IA G H A +
Sbjct: 551 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 610
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 611 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 662
Score = 244 (91.0 bits), Expect = 9.9e-17, P = 9.9e-17
Identities = 90/329 (27%), Positives = 150/329 (45%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D+ PK +E ++CG V VT +GQ++++G G +G V+
Sbjct: 404 LGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG--VDK- 460
Query: 336 VSYPKLIDA--LNG--SN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
VS P++++ LN SN + V+CG+ H +T + ++Y+WG G + G LG SE +
Sbjct: 461 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDY 518
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
+ P++V + L I ++ CG T +T +GK+ G F LG S + E
Sbjct: 519 YTPQRVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 577
Query: 451 TLKELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV- 508
T I +A GKT + +L T+G GQLG G+ + R+
Sbjct: 578 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 637
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKF 560
+ L +V+CG TIA T +F+ G+ G+L +P GS +
Sbjct: 638 INLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW 697
Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
P I G++ H + D++C +H ++ K
Sbjct: 698 PRPIFGSLHH--VPDLSCRGWHTILIVEK 724
Score = 162 (62.1 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 73/283 (25%), Positives = 123/283 (43%)
Query: 384 QVSEISHW-----IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD---GT--FG 433
+ SE+ W P+K+ G +C G H A +T +L+T+ + GT G
Sbjct: 343 RTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHG 402
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD++S P+ VE L+ SCG T + + G +L+ +G
Sbjct: 403 QLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD--------EG----QLYAFGS 450
Query: 494 GAEGQLGHGDAE-PRVV-PLCVK--VSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
G +G P V+ P+ + +S+ + +V+CG + + LT +V+S G +YG
Sbjct: 451 DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYG 508
Query: 550 QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK------GAN-- 600
+LG + P R++ K I + CG +++ +V G G N
Sbjct: 509 RLGLDSEEDYYTPQRVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQC 567
Query: 601 --GQLGH-GDNENKQTP--TLVEALRDKQVKSVVCGSNFTAAI 638
G + H +E T TL + L +++++ G TAAI
Sbjct: 568 MSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 610
Score = 137 (53.3 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K + V C
Sbjct: 372 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 431
Query: 631 GSNFTAAICLHKGVSIADHSICSGC 655
G +FT + +G A S GC
Sbjct: 432 GDDFTVCVT-DEGQLYAFGSDYYGC 455
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 274 (101.5 bits), Expect = 4.7e-21, P = 4.7e-21
Identities = 99/351 (28%), Positives = 164/351 (46%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ +I G HT ++ SG +Y
Sbjct: 32 TEPGVVLTLGQGDVGQLGLGENVMERKKPALVSI--PEDIVQAEAGGMHTVCLSKSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVDLQEKVIQVSA---GDSHTAALTEDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS-SKK 487
+F R + V + L+ +K M V + +V+VA L+
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGD 192
Query: 488 LFTWGDGAEGQLGH--------GDA---EPRVVPLCVKVSD-----DISFCKVACGHSIT 531
L+T G G +GQLG G E +VP CV + + F CG T
Sbjct: 193 LYTLGSGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFT 252
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYHIAVVSS 588
A+++ G V+ G ++Y QLG+ G+ F P + N ++ + G +H + S
Sbjct: 253 FAISSEGHVYGFGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWV-GFSGGQHHTVCMDS 311
Query: 589 KSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 312 EGKAYSLGRAEYGRLGLGEGAEEKSVPTLIPRL--PTVSSVACGASVGYAV 360
Score = 265 (98.3 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 100/376 (26%), Positives = 167/376 (44%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVS 337
+R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 56 ERKKPALVSIPEDIVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 110
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKV 396
P +D + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 111 VPGKVDLQE--KVIQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 168
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKE 454
+ ++++S G H +T G L+T G G G LG ++ + +E L
Sbjct: 169 QLSVPVVKVAS---GNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 455 LKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVP-- 510
K VM S G + + +SS+ ++ +G QLG E VP
Sbjct: 226 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISSEGHVYGFGLSNYHQLGTQGTESCFVPQN 285
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGK-FPTRIEGNI 568
L + S+ + G T+ + + G+ +S+G A+YG+LG G+ K PT I
Sbjct: 286 LTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSVPTLIP--- 342
Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV--EALRDKQVK 626
+ + +ACG+ V+ V+ WG G N QLG G +E+ +P + + L ++ V
Sbjct: 343 RLPTVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVL 402
Query: 627 SVVCGSNFTAAICLHK 642
+V G T + K
Sbjct: 403 TVSSGGQHTVLLVKDK 418
Score = 143 (55.4 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 53/197 (26%), Positives = 90/197 (45%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H + T G + T G G G LG G+ + ++ E V A G HT + +
Sbjct: 27 HRSHGTEPGVVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DIVQAEAGGMHTVCLSK- 84
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSIT 531
SG +++++G EG LG + +VP V + + + +V+ G S T
Sbjct: 85 ----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVDLQEKV--IQVSAGDSHT 131
Query: 532 IALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
ALT G+VF GS + G +G P P +++ ++ + +A G+ H+ +++
Sbjct: 132 AALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLSVP---VVKVASGNDHLVMLT 188
Query: 588 SKSEVYTWGKGANGQLG 604
++YT G G GQLG
Sbjct: 189 VDGDLYTLGSGEQGQLG 205
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 169 (64.5 bits), Expect = 6.8e-14, Sum P(3) = 6.8e-14
Identities = 45/140 (32%), Positives = 69/140 (49%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--------VSYPKLIDALN--GSNI 350
I+CGS H + ++ Q ++SWG GKLGHG + ++ PK I +L G +
Sbjct: 374 ISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTV 433
Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME-GLQISSIC 409
V+ G H A+TL + TWG G G LG W P ++ ++ +I IC
Sbjct: 434 ISVSSGYSHCMALTLDSGILTWGKGSD--GQLGTGFRHDIWSPFEIKRVIDKNEKIVQIC 491
Query: 410 CGPWHTAAIT-SAGKLFTFG 428
CG +++ IT +L+ FG
Sbjct: 492 CGYFNSFFITLEKRELYQFG 511
Score = 158 (60.7 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P +L S+ + S A ++ T ++ S+G + GV + + D +N
Sbjct: 311 PNLLSSSS--SSSSAATNNELKFKQTTPTKVLSFGGSNDNNFLGGV-INNELQMMTDQMN 367
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ------VSEISHWI--PRKVSG 398
I ++CG H A++ +Y+WG H G LG VS+ WI P+K+
Sbjct: 368 SIKIIQISCGSNHILALSDQYHVYSWGSAEH--GKLGHGEDYSFVSQNPRWINSPKKIKS 425
Query: 399 -QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KEL 455
Q +G+ + S+ G H A+T + T+G G+ G LG G R P E++ + K
Sbjct: 426 LQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNE 485
Query: 456 KTVMASCGVWHT 467
K V CG +++
Sbjct: 486 KIVQICCGYFNS 497
Score = 144 (55.7 bits), Expect = 4.9e-21, Sum P(4) = 4.9e-21
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEG-SGGKLGHGVEADVSY--PK------LIDALNGSNIH 351
++CGS H ++++ G ++SWG S G+LGHG ++ Y PK LI AL+G ++
Sbjct: 43 LSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHG-DSKNQYGKPKNIKKFSLIKALSGDSVI 101
Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
V+ G T +T G +Y WG I LGQ
Sbjct: 102 QVSTGLDFTFVLTDQGSIYNWGSNIEGQLALGQ 134
Score = 141 (54.7 bits), Expect = 4.9e-21, Sum P(4) = 4.9e-21
Identities = 40/145 (27%), Positives = 71/145 (48%)
Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSV-PREVETLK 453
++ QM ++I I CG H A++ ++++G G LGHG D S S PR + + K
Sbjct: 362 MTDQMNSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPK 421
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLS-SKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
++K++ GV ++ V+ S L+ + TWG G++GQLG G P
Sbjct: 422 KIKSLQEK-GV----TVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFE 476
Query: 513 VK--VSDDISFCKVACGHSITIALT 535
+K + + ++ CG+ + +T
Sbjct: 477 IKRVIDKNEKIVQICCGYFNSFFIT 501
Score = 135 (52.6 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 41/139 (29%), Positives = 70/139 (50%)
Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF----PTRIEGNIKHRY 572
+ I +++CG + +AL+ V+S GSA++G+LG G F P I K +
Sbjct: 367 NSIKIIQISCGSNHILALSDQYHVYSWGSAEHGKLGH-GEDYSFVSQNPRWINSPKKIKS 425
Query: 573 IED-------IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
+++ ++ G H ++ S + TWGKG++GQLG G + +P ++ + DK
Sbjct: 426 LQEKGVTVISVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNE 485
Query: 626 KSV-VCGSNFTAA-ICLHK 642
K V +C F + I L K
Sbjct: 486 KIVQICCGYFNSFFITLEK 504
Score = 129 (50.5 bits), Expect = 8.0e-13, Sum P(3) = 8.0e-13
Identities = 38/129 (29%), Positives = 59/129 (45%)
Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
QIF WG G H +E + P+L N NI ++CG HT ++ SGDLY+WG
Sbjct: 11 QIFYWGRGVNQGDKHIIEP-IEVPEL----NKKNIVQLSCGSTHTLVLSDSGDLYSWGSS 65
Query: 376 IHNLGLLGQV-SEISHWIPRKVSG-----QMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
++ G LG S+ + P+ + + G + + G T +T G ++ +G
Sbjct: 66 -NSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGS 124
Query: 430 GTFGALGHG 438
G L G
Sbjct: 125 NIEGQLALG 133
Score = 121 (47.7 bits), Expect = 5.7e-13, Sum P(3) = 5.7e-13
Identities = 42/142 (29%), Positives = 68/142 (47%)
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMG-SADYGQLGSP-GSTGKFPTRIEGNIKHRY 572
+S S A + + T +V S G S D LG + + T +IK
Sbjct: 314 LSSSSSSSSAATNNELKFKQTTPTKVLSFGGSNDNNFLGGVINNELQMMTDQMNSIK--- 370
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-----ENKQ---TPTLVEALRDKQ 624
I I+CGS HI +S + VY+WG +G+LGHG++ +N + +P +++L++K
Sbjct: 371 IIQISCGSNHILALSDQYHVYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKG 430
Query: 625 VK--SVVCGSNFTAAICLHKGV 644
V SV G + A+ L G+
Sbjct: 431 VTVISVSSGYSHCMALTLDSGI 452
Score = 118 (46.6 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 45/155 (29%), Positives = 68/155 (43%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
++F +G G + GD+ P EV L + V SCG HT + + SG
Sbjct: 11 QIFYWGRG----VNQGDKHIIE-PIEVPELNKKNIVQLSCGSTHTLVLSD-----SGD-- 58
Query: 483 LSSKKLFTWGDG-AEGQLGHGDAE-----PRVVPL--CVKVSDDISFCKVACGHSITIAL 534
L++WG + GQLGHGD++ P+ + +K S +V+ G T L
Sbjct: 59 -----LYSWGSSNSSGQLGHGDSKNQYGKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVL 113
Query: 535 TATGQVFSMGSADYGQL--GSPGSTGKFPTRIEGN 567
T G +++ GS GQL G P + + I N
Sbjct: 114 TDQGSIYNWGSNIEGQLALGQPVNKNEKENNINNN 148
Score = 111 (44.1 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN--IHMVACGE 357
S++ G H + +T I +WG+GS G+LG G D+ P I + N I + CG
Sbjct: 435 SVSSGYSHCMALTLDSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVIDKNEKIVQICCGY 494
Query: 358 FHTCAVTLSG-DLYTWG 373
F++ +TL +LY +G
Sbjct: 495 FNSFFITLEKRELYQFG 511
Score = 104 (41.7 bits), Expect = 4.9e-21, Sum P(4) = 4.9e-21
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSP---GSTGK-----FPTRIEGNIKHRYIE 574
+++ G+S T+ L G+ S+G ++GQLG P S K +PT I + + ++E
Sbjct: 568 QISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPY-FVE 626
Query: 575 DIACGSYH-IAVVSSKS 590
+ CG +H +A+VS+++
Sbjct: 627 SVQCGRWHSVAIVSNRN 643
Score = 89 (36.4 bits), Expect = 9.9e-10, Sum P(3) = 9.9e-10
Identities = 28/92 (30%), Positives = 40/92 (43%)
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALG----HG--DRSS-TSVPREVETLKELK 456
+I I G HT + G+ + G G FG LG H D+ S + P + L
Sbjct: 565 RIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYF 624
Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
CG WH+ AIV + + + +SKKL
Sbjct: 625 VESVQCGRWHSVAIV--SNRNLRDHLTNSKKL 654
Score = 85 (35.0 bits), Expect = 4.1e-19, Sum P(4) = 4.1e-19
Identities = 28/92 (30%), Positives = 45/92 (48%)
Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG----HG--DNEN-KQTPTLV 617
E N I+ I+ G H +++ E + G+G GQLG H D ++ PT++
Sbjct: 558 ENNDNSNRIKQISSGYSHTLILNENGECLSIGQGEFGQLGIPLDHSSIDKDSFVNYPTVI 617
Query: 618 EALRDKQVKSVVCGSNFTAAICLHKGVSIADH 649
AL V+SV CG + AI ++ ++ DH
Sbjct: 618 PALLPYFVESVQCGRWHSVAIVSNR--NLRDH 647
Score = 47 (21.6 bits), Expect = 4.9e-21, Sum P(4) = 4.9e-21
Identities = 17/65 (26%), Positives = 27/65 (41%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEP 770
+++ +S + RNS + N N S DG S +S+ +N K EP
Sbjct: 693 NKNNISSSLKRNSKSIINNSNSNNNNNNRGSLDVFDGLSV-SFQSF--IDFVNDKKNEEP 749
Query: 771 NSDFI 775
+ D I
Sbjct: 750 SPDAI 754
Score = 40 (19.1 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 717 SQIPRN--SSGLFQNCKRVTEKENMNSRSATDG 747
S+I +N SS L +N K + N N+ + G
Sbjct: 690 SKINKNNISSSLKRNSKSIINNSNSNNNNNNRG 722
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 210 (79.0 bits), Expect = 5.3e-21, Sum P(3) = 5.3e-21
Identities = 48/162 (29%), Positives = 89/162 (54%)
Query: 279 ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
A + + LP+VLE ++IACG++H ++++ GQ+ +WG G+ G G ++
Sbjct: 760 APKPEQHLPRVLEYPGGRP-RAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIAN 818
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVS 397
+D + I +ACG+FH+ + G L+T+G G+ LG G+ + + +P +V+
Sbjct: 819 LHQVDG-DWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGR-NNSNQLVPTRVN 876
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
G + +++ I CG HT +T G++ G G++G +G D
Sbjct: 877 GLI--CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDD 916
Score = 192 (72.6 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 71/242 (29%), Positives = 115/242 (47%)
Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE- 450
+PR + + G + +I CG H ++S+G+L +G FG G G + +V+
Sbjct: 767 LPRVL--EYPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG 824
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG--DAEPRV 508
++ + +CG +H+A I S+G L+T+G G GQLGHG + ++
Sbjct: 825 DWPAIEKI--ACGQFHSAFIC--------SDG----SLWTFGWGVWGQLGHGGRNNSNQL 870
Query: 509 VPLCVKVSDDISFCKV---ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
VP +V+ I CKV ACG + T+ LT TG+V GS YGQ+G K
Sbjct: 871 VP--TRVNGLI--CKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTP 926
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
+ + DIA YH ++ + V+ WG+ N Q E K +++ +R Q+
Sbjct: 927 LPLGPLRVRDIATHYYHSICITEDNRVFEWGR--NPQ------ELKMRMFVMKKIRSAQL 978
Query: 626 KS 627
K+
Sbjct: 979 KN 980
Score = 179 (68.1 bits), Expect = 7.7e-16, Sum P(3) = 7.7e-16
Identities = 56/208 (26%), Positives = 91/208 (43%)
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
P++++ G +ACG H ++ SG L WG +G I++ +V G
Sbjct: 768 PRVLE-YPGGRPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANL--HQVDG 824
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS--VPREVETLKELK 456
++ I CG +H+A I S G L+TFG G +G LGHG R++++ VP V L K
Sbjct: 825 DWPAIE--KIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CK 881
Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
+CG HT + + ++ G G+ GQ+G D +V
Sbjct: 882 VTQIACGRAHTVVLTDTG------------RVLVCGSGSYGQMGVDDDIKKVFAFTPLPL 929
Query: 517 DDISFCKVACGHSITIALTATGQVFSMG 544
+ +A + +I +T +VF G
Sbjct: 930 GPLRVRDIATHYYHSICITEDNRVFEWG 957
Score = 164 (62.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 41/119 (34%), Positives = 64/119 (53%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSY 581
+ACG + L+++GQ+ + G +GQ G G + + +++G+ IE IACG +
Sbjct: 781 IACGAEHILVLSSSGQLSAWGGNRFGQCGV-GHSFRIANLHQVDGDWPA--IEKIACGQF 837
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
H A + S ++T+G G GQLGHG +N N+ PT V L K V + CG T +
Sbjct: 838 HSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICK-VTQIACGRAHTVVL 895
Score = 147 (56.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
S+ACG H+ L+T +G +++WG+G +LGHG + + P + NG+ V+ G H
Sbjct: 1026 SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNH 1085
Query: 360 TCAVTLSGDLYTWG 373
T A T G ++ WG
Sbjct: 1086 TIASTDDGSVFAWG 1099
Score = 142 (55.0 bits), Expect = 5.3e-21, Sum P(3) = 5.3e-21
Identities = 41/114 (35%), Positives = 58/114 (50%)
Query: 445 VPREVETLKELK------TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
+PRE L+E+K V +CG+ H+A I S G L+TWG G + Q
Sbjct: 1006 IPREDLGLREVKHFLDGNIVSVACGLSHSALIT--------SEGT----LYTWGKGLDYQ 1053
Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
LGHG+ R+ P V + + V+ G++ TIA T G VF+ G D+GQ G
Sbjct: 1054 LGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 136 (52.9 bits), Expect = 3.9e-13, Sum P(3) = 3.9e-13
Identities = 34/134 (25%), Positives = 67/134 (50%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNG--SNIHMVAC 355
+ IACG H+ + G ++++G G G+LGHG + + +L+ +NG + +AC
Sbjct: 830 EKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSN--QLVPTRVNGLICKVTQIAC 887
Query: 356 GEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
G HT +T +G + G G + +G+ + ++ + P + L++ I +H
Sbjct: 888 GRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGP----LRVRDIATHYYH 943
Query: 415 TAAITSAGKLFTFG 428
+ IT ++F +G
Sbjct: 944 SICITEDNRVFEWG 957
Score = 127 (49.8 bits), Expect = 6.2e-07, Sum P(3) = 6.2e-07
Identities = 38/107 (35%), Positives = 51/107 (47%)
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
R+V ++G I S+ CG H+A ITS G L+T+G G LGHG+++ P +V
Sbjct: 1014 REVKHFLDG-NIVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPN 1072
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
K V S G HT +A GS +F WG GQ G
Sbjct: 1073 GAKWVNVSLGNNHT-----IASTDDGS-------VFAWGKNDFGQCG 1107
Score = 124 (48.7 bits), Expect = 3.7e-19, Sum P(3) = 3.7e-19
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
I +ACG H A+++S+ +YTWGKG + QLGHG+ + P V + +V G+
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGN 1083
Query: 633 NFTAA 637
N T A
Sbjct: 1084 NHTIA 1088
Score = 90 (36.7 bits), Expect = 1.7e-08, Sum P(3) = 1.7e-08
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN-GS-NIH 351
++ IACG H V++T G++ G GS G++G V+ D+ L G +
Sbjct: 878 LICKVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMG--VDDDIKKVFAFTPLPLGPLRVR 935
Query: 352 MVACGEFHTCAVTLSGDLYTWG 373
+A +H+ +T ++ WG
Sbjct: 936 DIATHYYHSICITEDNRVFEWG 957
Score = 89 (36.4 bits), Expect = 1.4e-15, Sum P(3) = 1.4e-15
Identities = 26/90 (28%), Positives = 45/90 (50%)
Query: 518 DISFCKVACGHSITIALTATGQVFSMGSA-DYGQLGSPGSTGKF-PTRI-EGNIKHRYIE 574
D + VACG S + +T+ G +++ G DY QLG + P ++ E N +++
Sbjct: 1021 DGNIVSVACGLSHSALITSEGTLYTWGKGLDY-QLGHGNKNERMEPHQVFEPN-GAKWV- 1077
Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
+++ G+ H + V+ WGK GQ G
Sbjct: 1078 NVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
Score = 38 (18.4 bits), Expect = 5.3e-21, Sum P(3) = 5.3e-21
Identities = 5/14 (35%), Positives = 10/14 (71%)
Query: 39 CPFRLSSDEKLLIW 52
C ++ D++L+IW
Sbjct: 711 CGATITEDDRLMIW 724
Score = 37 (18.1 bits), Expect = 6.7e-21, Sum P(3) = 6.7e-21
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 177 PQNRLGKAFSEVLS 190
P R GK F EVL+
Sbjct: 261 PIERSGKGFREVLT 274
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 269 (99.8 bits), Expect = 5.5e-21, P = 5.5e-21
Identities = 112/383 (29%), Positives = 165/383 (43%)
Query: 281 RRDALLPKVLE--STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
+ D L+P++L+ S D +SIA G H+ ++T G++F G G+LG DV
Sbjct: 13 KEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLC 72
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH--WIPRKV 396
L AL+G + VACG T + +G + + G G LG V +IS IP+K+
Sbjct: 73 FTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNA--FGQLG-VPQISGPCLIPQKI 129
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
E + I G H A T +G +F +G G + T +P KE
Sbjct: 130 KSLKE--KAVGIAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKT-LP-VFWAAKEPC 185
Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLCV 513
+ + GV V ++ + + L+ WG GQL + EP+ +
Sbjct: 186 EIKGNPGV--LLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQLVSKEVFLVEPKKIDTQF 243
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST---------GKF---- 560
+ I V G + +A T TG+VF+ G ADYGQLG + F
Sbjct: 244 FSHEKIG--AVWSGWTHLVAQTETGKVFTWGRADYGQLGRHAAVYVADRVIKLDSFLPCC 301
Query: 561 PT-RIEGNIKHRYIE-DIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
P E N H + IACGS H +AVV +WG +G G G N P V
Sbjct: 302 PQPEAEKNGNHTILLFQIACGSEHNLAVVGDCC--LSWGWNEHGMCGDGTEANVHVPKPV 359
Query: 618 EALR-DKQVKSVVCGSNFTAAIC 639
+AL KQ+ + CG+ + A+C
Sbjct: 360 KALGYAKQIL-IGCGAGHSLALC 381
Score = 217 (81.4 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 82/298 (27%), Positives = 134/298 (44%)
Query: 321 GEGSGGKLGHGVEADVSYPKLIDALNGS--NIHMVACGEFHTCAVTLSGDLYTWGDGIHN 378
G S G+LG G + DV P+L+ ++ +I +A G H+ +T +G+L+ G HN
Sbjct: 1 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCG---HN 57
Query: 379 -LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TAAITSAGKLFTFGDGTFGALG 436
G LG ++ + + + G + + CG W T + AG + + G FG LG
Sbjct: 58 KAGQLG-LNHTEDVLCFTLCTALSGFCVQEVACG-WDFTIILGRAGLVLSCGSNAFGQLG 115
Query: 437 HGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
S +P+++++LKE K V + G+ H A E +GL +F WG G
Sbjct: 116 VPQISGPCLIPQKIKSLKE-KAVGIAAGLRHALAATE--------SGL----VFQWGTGM 162
Query: 496 EGQ---LGHGDAEP----RVVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSAD 547
+ + G P P +K + + C+V+ +T TA G ++ GS
Sbjct: 163 ASRAKRVHQGKTLPVFWAAKEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNK 222
Query: 548 YGQLGSPGSTGKFPTRIEGNI-KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
+GQL S P +I+ H I + G H+ + +V+TWG+ GQLG
Sbjct: 223 HGQLVSKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFTWGRADYGQLG 280
Score = 132 (51.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 44/173 (25%), Positives = 76/173 (43%)
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVACGEFHTCAVTLSGDLYT 371
+G ++ WG G+L E + PK ID + I V G H A T +G ++T
Sbjct: 212 EGHLYVWGSNKHGQLV-SKEVFLVEPKKIDTQFFSHEKIGAVWSGWTHLVAQTETGKVFT 270
Query: 372 WGDGIHN-LG------LLGQVSEISHWIP--RKVSGQMEG---LQISSICCGPWHTAAIT 419
WG + LG + +V ++ ++P + + G + + I CG H A+
Sbjct: 271 WGRADYGQLGRHAAVYVADRVIKLDSFLPCCPQPEAEKNGNHTILLFQIACGSEHNLAVV 330
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
L ++G G G G ++ VP+ V+ L K ++ CG H+ A+ +
Sbjct: 331 GDCCL-SWGWNEHGMCGDGTEANVHVPKPVKALGYAKQILIGCGAGHSLALCQ 382
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 179 (68.1 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L A+ + G++HA+L+ GQ+FSWG G G+LGHG +EA+ P+L++AL G + VA
Sbjct: 159 LRARRLELGAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPE-PRLLEALQGLRMAEVA 217
Query: 355 CGEFHTCAVTLSGDLYTWG 373
G +H+ ++ +GD+Y WG
Sbjct: 218 AGGWHSVCLSETGDIYIWG 236
Score = 145 (56.1 bits), Expect = 6.2e-21, Sum P(2) = 6.2e-21
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 534 LTATGQVFSMGSADYGQLGSPG---STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
L G GSA G+ G+P + FP ++ + ++ ++CGS H AV++
Sbjct: 264 LEEDGSEVKRGSA--GEDGAPAPFIAVQPFPALLDLSPGSEAVK-VSCGSRHTAVLTRTG 320
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCG 631
E+YTWG G GQLGH D P VE DKQ V++V CG
Sbjct: 321 ELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCG 363
Score = 138 (53.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 35/96 (36%), Positives = 51/96 (53%)
Query: 323 GSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLG 380
GS G+ G A +P L+D GS V+CG HT +T +G+LYTWG G + G
Sbjct: 274 GSAGEDGAPAPFIAVQPFPALLDLSPGSEAVKVSCGSRHTAVLTRTGELYTWGWGKY--G 331
Query: 381 LLGQVSEISHWIPRKVSGQMEG-LQISSICCGPWHT 415
LG + P +V ++ LQ+ ++ CGPW+T
Sbjct: 332 QLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNT 367
Score = 135 (52.6 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVM 459
G + + CG HTA +T G+L+T+G G +G LGH D ++ P VE K+L+
Sbjct: 300 GSEAVKVSCGSRHTAVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRT 359
Query: 460 ASCGVWHT 467
SCG W+T
Sbjct: 360 VSCGPWNT 367
Score = 116 (45.9 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++F+WG G GQLGHG E P ++ + +VA G ++ L+ TG ++ G
Sbjct: 179 QVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWN 238
Query: 547 DYGQLGSP 554
+ GQL P
Sbjct: 239 ESGQLALP 246
Score = 113 (44.8 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 28/94 (29%), Positives = 43/94 (45%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H + +AG++F++G G G LGHG + PR +E L+ L+ + G WH+ +
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGGWHSVCL 226
Query: 471 VEVAG------KTSGSNGLSSKKLFTWGDGAEGQ 498
E SG L +K L G G+
Sbjct: 227 SETGDIYIWGWNESGQLALPTKSLAEDGKTTAGE 260
Score = 113 (44.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G+ H ++ + +V++WG G +GQLGHG E + P L+EAL+ ++ V G ++
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRHGQLGHGTLEAEPEPRLLEALQGLRMAEVAAGG--WHSV 224
Query: 639 CL 640
CL
Sbjct: 225 CL 226
Score = 111 (44.1 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 474 AGKTSG--SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
AG+ SG +G K+ DGA +P P + +S KV+CG T
Sbjct: 258 AGEASGLEEDGSEVKRGSAGEDGAPAPFIA--VQP--FPALLDLSPGSEAVKVSCGSRHT 313
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNI-KHRYIEDIACGSYHIAVVSSK 589
LT TG++++ G YGQLG +T P R+E + K + ++CG ++ V + +
Sbjct: 314 AVLTRTGELYTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQVRTVSCGPWNTYVYAVE 373
Query: 590 SE 591
E
Sbjct: 374 KE 375
Score = 101 (40.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G H + +G +++WG G H G LG + + PR + ++GL+++ + G WH+
Sbjct: 167 GAEHALLLDAAGQVFSWGAGRH--GQLGHGTLEAEPEPRLLEA-LQGLRMAEVAAGGWHS 223
Query: 416 AAITSAGKLFTFGDGTFGAL 435
++ G ++ +G G L
Sbjct: 224 VCLSETGDIYIWGWNESGQL 243
Score = 75 (31.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 24/74 (32%), Positives = 31/74 (41%)
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK- 514
+ V SCG HTA + +L+TWG G GQLGH D P V+
Sbjct: 302 EAVKVSCGSRHTAVLTRTG------------ELYTWGWGKYGQLGHKDTTTLDRPCRVEY 349
Query: 515 -VSDDISFCKVACG 527
V + V+CG
Sbjct: 350 FVDKQLQVRTVSCG 363
Score = 74 (31.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
P++LE+ L +A G H+V +++ G I+ WG G+L
Sbjct: 202 PRLLEALQGLRMAEVAAGGWHSVCLSETGDIYIWGWNESGQL 243
Score = 50 (22.7 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGV------WHTAAIVEVAGKT--SGSNG 482
FG G G + + R+V + + L+T S GV W A V G+ SG+ G
Sbjct: 12 FGFCGFGQALGSGLGRQVHSPEPLRTPGGSLGVCRVSASWSYTAFVTRGGRVQLSGAAG 70
Score = 39 (18.8 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 614 PTLVEALRDKQVKSVVCGSNFTAAI 638
P L++ + V CGS TA +
Sbjct: 292 PALLDLSPGSEAVKVSCGSRHTAVL 316
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 271 (100.5 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 100/354 (28%), Positives = 160/354 (45%)
Query: 297 DAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
D+ SI+ + H+ + + WG G+LG G + PK + + A
Sbjct: 31 DSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFAT 90
Query: 356 GEFHTCAVT----LSGDLYTWGDGIHNLGLLGQ--VSEISHWIPRKVSGQMEGLQISSIC 409
G HT A+ +SG + WG ++ G +G+ + + P K+ G G + +
Sbjct: 91 GASHTLAIARFDNVSG-VRAWGS--NSAGQIGRDPATVPTSSTPVKIGGF--GGAVQQVA 145
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWHT 467
G H+ A+ + G ++ +G + G L SS + PR+VET K + T
Sbjct: 146 AGGLHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAK--------LPIAPT 196
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
A VAG S S +S + + WG+ A GQLG+G +P V++ I+ K++ G
Sbjct: 197 AI---VAGG-SHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAG 252
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE--DIACGSYHIAV 585
S +AL +TG +++ GS YGQLG+ G+T T ++ + D+ G H
Sbjct: 253 GSHNLALDSTGAIWAWGSNAYGQLGN-GTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVA 311
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD---KQVKSVVC-GSNFT 635
V+S VYTWG G L G ++ +P V + V+ VV GS FT
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT 365
Score = 264 (98.0 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 90/347 (25%), Positives = 150/347 (43%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIF---SWGEGSGGKLGHGVEADV---S 337
A PK L + A G+ H + + + + +WG S G++G A V S
Sbjct: 71 AATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRD-PATVPTSS 129
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
P I G+ + VA G H+ A+ G ++ WG L +S + + PR+V
Sbjct: 130 TPVKIGGFGGA-VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVE 187
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
+ ++I G H+ A TS + + +G+ G LG+G S +P++V+ +
Sbjct: 188 TAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITI 246
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
S G H A+ S G ++ WG A GQLG+G + P+ + +
Sbjct: 247 RKISAGGSHNLAL--------DSTGA----IWAWGSNAYGQLGNGTTTNQSTPVQLTLPA 294
Query: 518 DIS-FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIE--GNIKHRY 572
++ F V G S ++A+ + V++ G G L S G+TG P ++ N+
Sbjct: 295 GVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLL-SVGTTGDQLSPAQVRDASNVPFTD 353
Query: 573 IEDIAC-GSYHIAVVSSKSE-VYTWGKGANGQLGHGDNENKQTPTLV 617
+E + GS+ V + S ++ WG GQLG G N+ P V
Sbjct: 354 VERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 65/233 (27%), Positives = 102/233 (43%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H+A + L +G+ G LG G +S + P+ + + + G HT AI
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC---VKVSD-DISFCKVACGHS 529
SG WG + GQ+G +P VP VK+ + +VA G
Sbjct: 102 -DNVSGVRA--------WGSNSAGQIGR---DPATVPTSSTPVKIGGFGGAVQQVAAGGL 149
Query: 530 ITIALTATGQVFSMGSADYGQLG-SP-GSTGKF-PTRIE-GNIKHRYIEDIACGSYHIAV 585
++AL A G V++ GS GQL +P S +F P ++E + +A GS+ IA
Sbjct: 150 HSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAY 208
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S+ E Y WG A+GQLG+G + P V+ ++ + G + A+
Sbjct: 209 TST--EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 271 (100.5 bits), Expect = 6.9e-21, P = 6.9e-21
Identities = 100/354 (28%), Positives = 160/354 (45%)
Query: 297 DAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
D+ SI+ + H+ + + WG G+LG G + PK + + A
Sbjct: 31 DSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFAT 90
Query: 356 GEFHTCAVT----LSGDLYTWGDGIHNLGLLGQ--VSEISHWIPRKVSGQMEGLQISSIC 409
G HT A+ +SG + WG ++ G +G+ + + P K+ G G + +
Sbjct: 91 GASHTLAIARFDNVSG-VRAWGS--NSAGQIGRDPATVPTSSTPVKIGGF--GGAVQQVA 145
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWHT 467
G H+ A+ + G ++ +G + G L SS + PR+VET K + T
Sbjct: 146 AGGLHSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAK--------LPIAPT 196
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
A VAG S S +S + + WG+ A GQLG+G +P V++ I+ K++ G
Sbjct: 197 AI---VAGG-SHSIAYTSTEAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAG 252
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE--DIACGSYHIAV 585
S +AL +TG +++ GS YGQLG+ G+T T ++ + D+ G H
Sbjct: 253 GSHNLALDSTGAIWAWGSNAYGQLGN-GTTTNQSTPVQLTLPAGVTGFIDVFAGPSHSVA 311
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD---KQVKSVVC-GSNFT 635
V+S VYTWG G L G ++ +P V + V+ VV GS FT
Sbjct: 312 VASNFTVYTWGFNTLGLLSVGTTGDQLSPAQVRDASNVPFTDVERVVLLGSFFT 365
Score = 264 (98.0 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 90/347 (25%), Positives = 150/347 (43%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIF---SWGEGSGGKLGHGVEADV---S 337
A PK L + A G+ H + + + + +WG S G++G A V S
Sbjct: 71 AATPKRLRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRD-PATVPTSS 129
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
P I G+ + VA G H+ A+ G ++ WG L +S + + PR+V
Sbjct: 130 TPVKIGGFGGA-VQQVAAGGLHSMALA-GGTVWAWGSNSAGQLALNPISSATRFAPRQVE 187
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
+ ++I G H+ A TS + + +G+ G LG+G S +P++V+ +
Sbjct: 188 TAKLPIAPTAIVAGGSHSIAYTST-EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITI 246
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
S G H A+ S G ++ WG A GQLG+G + P+ + +
Sbjct: 247 RKISAGGSHNLAL--------DSTGA----IWAWGSNAYGQLGNGTTTNQSTPVQLTLPA 294
Query: 518 DIS-FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIE--GNIKHRY 572
++ F V G S ++A+ + V++ G G L S G+TG P ++ N+
Sbjct: 295 GVTGFIDVFAGPSHSVAVASNFTVYTWGFNTLGLL-SVGTTGDQLSPAQVRDASNVPFTD 353
Query: 573 IEDIAC-GSYHIAVVSSKSE-VYTWGKGANGQLGHGDNENKQTPTLV 617
+E + GS+ V + S ++ WG GQLG G N+ P V
Sbjct: 354 VERVVLLGSFFTIVKKNGSGGMWAWGYNGYGQLGDGTTSNRTAPVQV 400
Score = 170 (64.9 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 65/233 (27%), Positives = 102/233 (43%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H+A + L +G+ G LG G +S + P+ + + + G HT AI
Sbjct: 42 HSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKRLRLGFATYSSGFATGASHTLAIARF 101
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC---VKVSD-DISFCKVACGHS 529
SG WG + GQ+G +P VP VK+ + +VA G
Sbjct: 102 -DNVSGVRA--------WGSNSAGQIGR---DPATVPTSSTPVKIGGFGGAVQQVAAGGL 149
Query: 530 ITIALTATGQVFSMGSADYGQLG-SP-GSTGKF-PTRIE-GNIKHRYIEDIACGSYHIAV 585
++AL A G V++ GS GQL +P S +F P ++E + +A GS+ IA
Sbjct: 150 HSMAL-AGGTVWAWGSNSAGQLALNPISSATRFAPRQVETAKLPIAPTAIVAGGSHSIAY 208
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S+ E Y WG A+GQLG+G + P V+ ++ + G + A+
Sbjct: 209 TST--EAYAWGNNASGQLGNGTTLSNHMPQKVQLPSSITIRKISAGGSHNLAL 259
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 271 (100.5 bits), Expect = 9.8e-21, P = 9.8e-21
Identities = 106/368 (28%), Positives = 166/368 (45%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV--EADVSYPKLIDALNGSNIHMVACG 356
Q++A G H V ++ G ++++G G LG E + P +D G I V+ G
Sbjct: 71 QAVA-GGMHTVCLSDTGNVYTFGCNDEGALGRDTSEEGSETVPAKVDL--GEKIIQVSAG 127
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHT 415
+ H+ A+T G +Y WG N G++G + + +P KV ++I S G H
Sbjct: 128 DSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKIVS---GNDHL 184
Query: 416 AAITSAGKLFTFGDGTFGALG----H----GDRSSTS---VPREVETLKELKTVMAS--C 462
+T+ G+L+T G G G LG H G R P+ V K V C
Sbjct: 185 VMLTAHGELYTSGCGEQGQLGRVAEHFANRGGRKGLMRLLEPQMVIIKPRGKVVFTDVFC 244
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD----D 518
G + T A+ + G G GLS+ QLG VP VK+S
Sbjct: 245 GAYFTFAVSK-EGHVYGF-GLSNYH----------QLGTQSTNTCFVP--VKLSSFKNST 290
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDI 576
S+ + G T+ L + G+ +S+G A+YG+LG G+ PT + G I ++ +
Sbjct: 291 TSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGLGKDVGEKSEPTVVPG-ISD--VQVV 347
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV--EALRDKQVKSVVCGSNF 634
ACG+ V+ + V++WG G N QLG G+ E++ +P + + L ++ V SV G
Sbjct: 348 ACGASVSYAVTKQGSVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLSVSSGGQH 407
Query: 635 TAAICLHK 642
T + K
Sbjct: 408 TVLLVKDK 415
Score = 239 (89.2 bits), Expect = 5.0e-17, P = 5.0e-17
Identities = 92/339 (27%), Positives = 161/339 (47%)
Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
++G + G+G G+LG G + + P L+ G + VA G HT ++ +G++YT
Sbjct: 33 EKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEGI-VQAVA-GGMHTVCLSDTGNVYT 90
Query: 372 WGDGIHNLGLLGQVS--EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
+G ++ G LG+ + E S +P KV G +I + G H+AA+T G ++ +G
Sbjct: 91 FG--CNDEGALGRDTSEEGSETVPAKVD---LGEKIIQVSAGDSHSAALTEDGGVYVWGS 145
Query: 430 --GTFGALGHGD-RSSTSVPREVETLKEL-KTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
G +G + +VP +V K + K V + + A E+ G G
Sbjct: 146 FRDNNGVIGLLEPMKKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLG 205
Query: 486 K--KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
+ + F G +G + EP++V +K + F V CG T A++ G V+
Sbjct: 206 RVAEHFANRGGRKGLMRL--LEPQMV--IIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGF 261
Query: 544 GSADYGQLGSPGSTGKF-PTRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
G ++Y QLG+ + F P ++ N ++ + G +H ++S+ + Y+ G+
Sbjct: 262 GLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWV-GFSGGQHHTLCLNSEGKAYSLGRAEY 320
Query: 601 GQLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G+LG G D K PT+V + D QV V CG++ + A+
Sbjct: 321 GRLGLGKDVGEKSEPTVVPGISDVQV--VACGASVSYAV 357
Score = 138 (53.6 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 47/166 (28%), Positives = 73/166 (43%)
Query: 480 SNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
S+G + G G GQLG G D R P V + + I + G T+ L+ TG
Sbjct: 29 SHGQEKGLVLVLGQGDVGQLGLGEDVMERKKPALVTLPEGI--VQAVAGGMHTVCLSDTG 86
Query: 539 QVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG- 596
V++ G D G LG S G + ++ + I+ ++ G H A ++ VY WG
Sbjct: 87 NVYTFGCNDEGALGRDTSEEGSETVPAKVDLGEKIIQ-VSAGDSHSAALTEDGGVYVWGS 145
Query: 597 -KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
+ NG +G + K T V+ DK V +V G++ + H
Sbjct: 146 FRDNNGVIGLLEPMKKCTVP-VKVPIDKPVVKIVSGNDHLVMLTAH 190
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 255 (94.8 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 86/278 (30%), Positives = 133/278 (47%)
Query: 281 RRDALLPKVLESTVVLDA-QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
+ D LLP+ L + I G H+ +VT QG +F G G+LG G DV Y
Sbjct: 33 KEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLNKDGQLGLGHTEDVLYF 92
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-PRKVSG 398
L +L G I VACG T +T +G + + G ++ G LG + P+ +
Sbjct: 93 TLCKSLLGCPIQQVACGWDFTIILTKNGQVLSCGS--NSFGQLGVPHGPRRCVVPQAIEV 150
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
Q E ++ SI G H A T++G +F +G G + G ++P + T KE V
Sbjct: 151 QRE--KVVSIAAGLRHALAATASGLVFQWGTG-LASSGRRLCPGQTLPLFL-TAKEPSKV 206
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV-SD 517
+ G+ ++ A+ +AG ++ + +L+ WG GQL ++ +PL K+ +
Sbjct: 207 --TVGLENSQAVCVLAGSGHSASLTDAGELYVWGSNKHGQLA---SQAAFLPLPQKIEAH 261
Query: 518 DISFCKVAC---GHSITIALTATGQVFSMGSADYGQLG 552
KVA G + +A T TG+VF+ G ADYGQLG
Sbjct: 262 RFQNEKVAAVWSGWTHLVAQTETGKVFTWGRADYGQLG 299
Score = 251 (93.4 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 90/306 (29%), Positives = 144/306 (47%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPK-LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-- 373
+F+WG S G+LG G + DV P+ L + + + G H+ VT G L+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVCGLN 76
Query: 374 -DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TAAITSAGKLFTFGDGT 431
DG LGL G ++ ++ K + G I + CG W T +T G++ + G +
Sbjct: 77 KDG--QLGL-GHTEDVLYFTLCK---SLLGCPIQQVACG-WDFTIILTKNGQVLSCGSNS 129
Query: 432 FGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
FG LG HG R VP+ +E +E K V + G+ H A ++GL +F
Sbjct: 130 FGQLGVPHGPRRCV-VPQAIEVQRE-KVVSIAAGLRHALAAT--------ASGL----VF 175
Query: 490 TWGDG--AEGQ-LGHGDAEPRVV----P--LCVKVSDDISFCKVA-CGHSITIALTATGQ 539
WG G + G+ L G P + P + V + + + C +A GHS + LT G+
Sbjct: 176 QWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSAS--LTDAGE 233
Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
++ GS +GQL S + P +IE + ++ + + G H+ + +V+TWG+
Sbjct: 234 LYVWGSNKHGQLASQAAFLPLPQKIEAHRFQNEKVAAVWSGWTHLVAQTETGKVFTWGRA 293
Query: 599 ANGQLG 604
GQLG
Sbjct: 294 DYGQLG 299
Score = 181 (68.8 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 68/236 (28%), Positives = 99/236 (41%)
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-ETLKELKTVMASCGVWHTAAI 470
P + A A LF +G ++G LG G + +P+++ E K + G H+A +
Sbjct: 5 PSASEAAPPATALFAWGANSYGQLGLGHKEDVLLPQQLSEFCKPGCVKRITGGGGHSAIV 64
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHS 529
+ GS LF G +GQLG G E + LC + +VACG
Sbjct: 65 TD-----QGS-------LFVCGLNKDGQLGLGHTEDVLYFTLCKSLLG-CPIQQVACGWD 111
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
TI LT GQV S GS +GQLG P + P IE ++ + IA G H +
Sbjct: 112 FTIILTKNGQVLSCGSNSFGQLGVPHGPRRCVVPQAIE--VQREKVVSIAAGLRHALAAT 169
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ V+ WG G G + P + A K+ V G + A+C+ G
Sbjct: 170 ASGLVFQWGTGLASS-GRRLCPGQTLPLFLTA---KEPSKVTVGLENSQAVCVLAG 221
Score = 179 (68.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 76/280 (27%), Positives = 118/280 (42%)
Query: 369 LYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
L+ WG + LGL G ++ +P+++S + + I G H+A +T G LF
Sbjct: 17 LFAWGANSYGQLGL-GHKEDVL--LPQQLSEFCKPGCVKRITGGGGHSAIVTDQGSLFVC 73
Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
G G LG G ++L +CG W I+ NG +
Sbjct: 74 GLNKDGQLGLGHTEDVLYFTLCKSLLGCPIQQVACG-WDFTIILT-------KNG----Q 121
Query: 488 LFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
+ + G + GQLG HG PR VVP ++V + +A G +A TA+G VF
Sbjct: 122 VLSCGSNSFGQLGVPHG---PRRCVVPQAIEVQRE-KVVSIAAGLRHALAATASGLVFQW 177
Query: 544 GS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G+ A G+ PG T K P+++ +++ + GS H A ++ E+Y W
Sbjct: 178 GTGLASSGRRLCPGQTLPLFLTAKEPSKVTVGLENSQAVCVLAGSGHSASLTDAGELYVW 237
Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
G +GQL P +EA R + K S +T
Sbjct: 238 GSNKHGQLA-SQAAFLPLPQKIEAHRFQNEKVAAVWSGWT 276
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 262 (97.3 bits), Expect = 2.4e-19, P = 2.4e-19
Identities = 56/170 (32%), Positives = 89/170 (52%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ IACG +H+ ++T G + ++G G G+ G G D P + +L G I VA G +
Sbjct: 314 KKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLW 373
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAA 417
HT + GD+Y +G + G LG + + +P+ + +E + + +I CG HTA
Sbjct: 374 HTTCASSDGDVYAFGG--NQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAV 431
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
IT G++F +G +G LG GD + P EV +K+ +CG WHT
Sbjct: 432 ITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCFPKNIACGWWHT 480
Score = 247 (92.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 74/247 (29%), Positives = 121/247 (48%)
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLKELKTVMA 460
G++I S+ G HT A++ G+++ +G G G LG G R S P + ++ A
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKA 292
Query: 461 -SCGVWHTAAIVEVAGKTSGS-------NGLSSK------KLFTWGDGAEGQLGHGDAEP 506
S GV + +++V+ G+ GS G S L T+G G GQ G G +
Sbjct: 293 TSSGV-NMSSVVQ-CGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDD 350
Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIE 565
+ P CV I +VA G T ++ G V++ G +GQLG+ + P +E
Sbjct: 351 ELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLE 410
Query: 566 G-NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
N+++ ++ I+CG+ H AV++ + V+ WG GQLG GD ++ P V ++D
Sbjct: 411 APNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGIGDVIDRNAPAEVR-IKDCF 469
Query: 625 VKSVVCG 631
K++ CG
Sbjct: 470 PKNIACG 476
Score = 234 (87.4 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 65/191 (34%), Positives = 93/191 (48%)
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
GS + +ACG H+ +T +G L T+G G++ G GQ S P VS + G++I
Sbjct: 310 GSYVKKIACGGRHSAVITDTGALLTFGWGLY--GQCGQGSTDDELSPTCVSSLL-GIRIE 366
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR--EVETLKELKTVMASCGV 464
+ G WHT +S G ++ FG FG LG G + ++P+ E L+ + SCG
Sbjct: 367 EVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGA 426
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK- 523
HTA I + G ++F WG GQLG GD R P V++ D F K
Sbjct: 427 RHTAVITD--------EG----RVFCWGWNKYGQLGIGDVIDRNAPAEVRIKD--CFPKN 472
Query: 524 VACGHSITIAL 534
+ACG T+ L
Sbjct: 473 IACGWWHTLLL 483
Score = 207 (77.9 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 56/187 (29%), Positives = 87/187 (46%)
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
G++ G + I CG H+A IT G L TFG G +G G G P V +L ++
Sbjct: 306 GRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRI 365
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS- 516
+ G+WHT + S+G ++ +G GQLG G + +P ++
Sbjct: 366 EEVAAGLWHTTC--------ASSDG----DVYAFGGNQFGQLGTGCDQAETLPKLLEAPN 413
Query: 517 -DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
++++ ++CG T +T G+VF G YGQLG G E IK + ++
Sbjct: 414 LENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGI-GDVIDRNAPAEVRIKDCFPKN 472
Query: 576 IACGSYH 582
IACG +H
Sbjct: 473 IACGWWH 479
Score = 177 (67.4 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 45/120 (37%), Positives = 65/120 (54%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGS 580
K+ACG + +T TG + + G YGQ G GST PT + + R IE++A G
Sbjct: 315 KIACGGRHSAVITDTGALLTFGWGLYGQCGQ-GSTDDELSPTCVSSLLGIR-IEEVAAGL 372
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGSNFTAAI 638
+H SS +VY +G GQLG G ++ + P L+EA L + VK++ CG+ TA I
Sbjct: 373 WHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVI 432
Score = 168 (64.2 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 39/135 (28%), Positives = 68/135 (50%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D L P + S + + + +A G H + G ++++G G+LG G + + PKL+
Sbjct: 350 DELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLL 409
Query: 343 DALNGSNIHM--VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
+A N N+++ ++CG HT +T G ++ WG + G LG I P +V ++
Sbjct: 410 EAPNLENVNVKTISCGARHTAVITDEGRVFCWG--WNKYGQLGIGDVIDRNAPAEV--RI 465
Query: 401 EGLQISSICCGPWHT 415
+ +I CG WHT
Sbjct: 466 KDCFPKNIACGWWHT 480
Score = 104 (41.7 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 59/253 (23%), Positives = 95/253 (37%)
Query: 311 VTKQGQIFSWGEGSGGKLGHGV---EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
V Q ++ WG G +V P +++ + ++ CG A SG
Sbjct: 27 VVSQRVVYMWGYLPGASPQRSPLMSPVEVKIPPAVES-SWKDVSGGGCG--FAMATAESG 83
Query: 368 DLYTWGDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
L TWG +LG V+ H P E + + G H A+T +++T
Sbjct: 84 KLITWGS-TDDLGQ-SYVTSGKHGETPEPFPLPPE-VCVQKAEAGWAHCVAVTENQQVYT 140
Query: 427 FG------DG-TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
+G G FG + GD ++ E + S G T++ VE G G
Sbjct: 141 WGWRECIPTGRVFGQVD-GDSCERNISFSTEQVSSSSQGKKSSG--GTSSQVEGRG---G 194
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+++ AE + + +P V ++ + VA G T+AL+ GQ
Sbjct: 195 GEPTKKRRISPSKQAAENSSQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQ 254
Query: 540 VFSMGSADYGQLG 552
V+ G GQLG
Sbjct: 255 VWGWGYGGEGQLG 267
Score = 94 (38.1 bits), Expect = 6.9e-15, Sum P(2) = 6.9e-15
Identities = 58/242 (23%), Positives = 95/242 (39%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY---PKLI 342
+P +ES+ D CG A+ + G++ +WG S LG + P+
Sbjct: 57 IPPAVESSWK-DVSGGGCG--FAMATAESGKLITWG--STDDLGQSYVTSGKHGETPEPF 111
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWG--DGIHNLGLLGQVSEISHWIPRKVSGQM 400
+ G H AVT + +YTWG + I + GQV S R +S
Sbjct: 112 PLPPEVCVQKAEAGWAHCVAVTENQQVYTWGWRECIPTGRVFGQVDGDS--CERNISFST 169
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
E Q+SS G + +S + G+ T + + + + + +L +
Sbjct: 170 E--QVSSSSQGKKSSGGTSSQVEGRGGGEPTKKRRISPSKQAAENSSQSDNI-DLSALPC 226
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSS-KKLFTWGDGAEGQLGHGD-----AEPRVVPLCVK 514
+ IV VA + LS +++ WG G EGQLG G + P +P C++
Sbjct: 227 LVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIP-CIE 285
Query: 515 VS 516
S
Sbjct: 286 PS 287
Score = 87 (35.7 bits), Expect = 1.5e-20, Sum P(2) = 1.5e-20
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 277 SSADRRD-ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
S +D D + LP ++ + S+A G +H + ++ GQ++ WG G G+LG G
Sbjct: 214 SQSDNIDLSALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVR 273
Query: 336 -VSYPKLIDALNGSN 349
VS P I + S+
Sbjct: 274 LVSSPHPIPCIEPSS 288
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 276 (102.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 84/304 (27%), Positives = 137/304 (45%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL G
Sbjct: 374 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 433
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H A++ +L+ WG G + G LG + SH P+ V G +
Sbjct: 434 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHCCPQLVP-MPPGQEAQR 490
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV--MASCGVW 465
+ CG + +T G+ G F LG S P + ++E T + S +
Sbjct: 491 VVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLD 550
Query: 466 HTAAI-VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
+ V++ S + +S +T+G A ++ P V+ I V
Sbjct: 551 QEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR-RVSRA-------PCRVQGLQGIKISTV 602
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSY 581
ACG + T+A+ A G+VFS G G+LG P ++ + H Y + ++C G+
Sbjct: 603 ACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSCCHGNT 662
Query: 582 HIAV 585
+AV
Sbjct: 663 LLAV 666
Score = 258 (95.9 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 89/319 (27%), Positives = 141/319 (44%)
Query: 321 GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN 378
G G G L +E + ++ +G I VACG+ T +T G + T+G G +
Sbjct: 353 GAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNG 412
Query: 379 -LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
LG G +++IS P V + G ++ + CG H A+++ +LF +G G G LG
Sbjct: 413 CLGH-GSLNDISQ--PTIVEALL-GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL 468
Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNGLSSKKLFTWGDGA 495
G R S P+ V + CG+ ++ I+ V G+ GSN + L G
Sbjct: 469 GTRESHCCPQLVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNRFNKLGLDPLSLGE 527
Query: 496 EGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALT-ATGQVFSMGSADYGQLG 552
E H E V PL D V G + + A+T A+G ++ GS
Sbjct: 528 E-PAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS------- 579
Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE-NK 611
+ + P R++G ++ I +ACG + ++ EV++WGKGA G+LG D +
Sbjct: 580 NARRVSRAPCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGL 638
Query: 612 QTPTLVEALRDKQVKSVVC 630
P ++ V SV C
Sbjct: 639 PRPVQLDETHPYTVTSVSC 657
Score = 253 (94.1 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 78/263 (29%), Positives = 118/263 (44%)
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
++ R + GQ G+ I + CG TA +T G + TFG G+ G LGHG + S P VE
Sbjct: 371 FVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVE 429
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L + V +CG H A+ + ++LF WG G G+LG G E P
Sbjct: 430 ALLGYEMVQVACGASHVLALS------------TERELFAWGRGDGGRLGLGTRESHCCP 477
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPT---RIE- 565
V + +V CG ++ LT GQ + GS + +LG P S G+ P ++E
Sbjct: 478 QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEE 537
Query: 566 -------GN--IKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNENKQTPT 615
G+ + + + G+ H A V+ S + YT+G A + P
Sbjct: 538 AVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR--------RVSRAPC 589
Query: 616 LVEALRDKQVKSVVCGSNFTAAI 638
V+ L+ ++ +V CG FT AI
Sbjct: 590 RVQGLQGIKISTVACGDAFTVAI 612
Score = 227 (85.0 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 75/266 (28%), Positives = 120/266 (45%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ + ++F+WG G GG+LG G P+L+
Sbjct: 421 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLV 480
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL----LG-------QVSEISH 390
G V CG + +T+ G G N LGL LG QV E
Sbjct: 481 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVT 540
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSA-GKLFTFGDGTFGALGHGDRSSTSVPREV 449
+ P S ++ + S+ G H+AA+T A G +TFG R + P V
Sbjct: 541 FTPLG-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRVSRAPCRV 591
Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---P 506
+ L+ +K +CG T AI G+ G ++F+WG GA G+LG D + P
Sbjct: 592 QGLQGIKISTVACGDAFTVAI--------GAEG----EVFSWGKGARGRLGRKDEDAGLP 639
Query: 507 RVVPLCVKVSDDISFCKVACGHSITI 532
R P+ + + + V+C H T+
Sbjct: 640 R--PVQLDETHPYTVTSVSCCHGNTL 663
Score = 183 (69.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PT 562
+P+ V ++ ++ VACG T LT G + + GS G LG GS PT
Sbjct: 368 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH-GSLNDISQPT 426
Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
+E + + ++ +ACG+ H+ +S++ E++ WG+G G+LG G E+ P LV
Sbjct: 427 IVEALLGYEMVQ-VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPG 485
Query: 623 KQVKSVVCG 631
++ + VVCG
Sbjct: 486 QEAQRVVCG 494
Score = 159 (61.0 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 56/185 (30%), Positives = 88/185 (47%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG----------- 329
R P+++ +AQ + CG ++++T GQ + G KLG
Sbjct: 471 RESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPA 530
Query: 330 -HG-VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTL-SGDLYTWGDGIHNLGLLGQV 385
H VE V++ L A L+ + V G H+ AVT SGD YT+G +V
Sbjct: 531 PHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR------RV 584
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S P +V G ++G++IS++ CG T AI + G++F++G G G LG D + +
Sbjct: 585 SRA----PCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDA-GL 638
Query: 446 PREVE 450
PR V+
Sbjct: 639 PRPVQ 643
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 787 SRRVSRAPSPIS-----RKSSPACSITMNSFTDLANSE-VIFEYSK 826
+RRVSRAP + + S+ AC ++FT +E +F + K
Sbjct: 581 ARRVSRAPCRVQGLQGIKISTVACG---DAFTVAIGAEGEVFSWGK 623
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 276 (102.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 84/304 (27%), Positives = 137/304 (45%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+ LE + + +ACG +T +G I ++G GS G LGHG D+S P +++AL G
Sbjct: 378 RFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVEALLG 437
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
+ VACG H A++ +L+ WG G + G LG + SH P+ V G +
Sbjct: 438 YEMVQVACGASHVLALSTERELFAWGRG--DGGRLGLGTRESHCCPQLVP-MPPGQEAQR 494
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV--MASCGVW 465
+ CG + +T G+ G F LG S P + ++E T + S +
Sbjct: 495 VVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPLGSAPLD 554
Query: 466 HTAAI-VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
+ V++ S + +S +T+G A ++ P V+ I V
Sbjct: 555 QEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR-RVSRA-------PCRVQGLQGIKISTV 606
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSY 581
ACG + T+A+ A G+VFS G G+LG P ++ + H Y + ++C G+
Sbjct: 607 ACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGLPRPVQLDETHPYTVTSVSCCHGNT 666
Query: 582 HIAV 585
+AV
Sbjct: 667 LLAV 670
Score = 258 (95.9 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 89/319 (27%), Positives = 141/319 (44%)
Query: 321 GEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN 378
G G G L +E + ++ +G I VACG+ T +T G + T+G G +
Sbjct: 357 GAGGGALLPGAIEQPQPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNG 416
Query: 379 -LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
LG G +++IS P V + G ++ + CG H A+++ +LF +G G G LG
Sbjct: 417 CLGH-GSLNDISQ--PTIVEALL-GYEMVQVACGASHVLALSTERELFAWGRGDGGRLGL 472
Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNGLSSKKLFTWGDGA 495
G R S P+ V + CG+ ++ I+ V G+ GSN + L G
Sbjct: 473 GTRESHCCPQLVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNRFNKLGLDPLSLGE 531
Query: 496 EGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALT-ATGQVFSMGSADYGQLG 552
E H E V PL D V G + + A+T A+G ++ GS
Sbjct: 532 E-PAPHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS------- 583
Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE-NK 611
+ + P R++G ++ I +ACG + ++ EV++WGKGA G+LG D +
Sbjct: 584 NARRVSRAPCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDAGL 642
Query: 612 QTPTLVEALRDKQVKSVVC 630
P ++ V SV C
Sbjct: 643 PRPVQLDETHPYTVTSVSC 661
Score = 253 (94.1 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 78/263 (29%), Positives = 118/263 (44%)
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
++ R + GQ G+ I + CG TA +T G + TFG G+ G LGHG + S P VE
Sbjct: 375 FVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGHGSLNDISQPTIVE 433
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
L + V +CG H A+ + ++LF WG G G+LG G E P
Sbjct: 434 ALLGYEMVQVACGASHVLALS------------TERELFAWGRGDGGRLGLGTRESHCCP 481
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPT---RIE- 565
V + +V CG ++ LT GQ + GS + +LG P S G+ P ++E
Sbjct: 482 QLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEE 541
Query: 566 -------GN--IKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNENKQTPT 615
G+ + + + G+ H A V+ S + YT+G A + P
Sbjct: 542 AVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR--------RVSRAPC 593
Query: 616 LVEALRDKQVKSVVCGSNFTAAI 638
V+ L+ ++ +V CG FT AI
Sbjct: 594 RVQGLQGIKISTVACGDAFTVAI 616
Score = 227 (85.0 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 75/266 (28%), Positives = 120/266 (45%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
D P ++E+ + + +ACG+ H + ++ + ++F+WG G GG+LG G P+L+
Sbjct: 425 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLV 484
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL----LG-------QVSEISH 390
G V CG + +T+ G G N LGL LG QV E
Sbjct: 485 PMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVT 544
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSA-GKLFTFGDGTFGALGHGDRSSTSVPREV 449
+ P S ++ + S+ G H+AA+T A G +TFG R + P V
Sbjct: 545 FTPLG-SAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNA--------RRVSRAPCRV 595
Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---P 506
+ L+ +K +CG T AI G+ G ++F+WG GA G+LG D + P
Sbjct: 596 QGLQGIKISTVACGDAFTVAI--------GAEG----EVFSWGKGARGRLGRKDEDAGLP 643
Query: 507 RVVPLCVKVSDDISFCKVACGHSITI 532
R P+ + + + V+C H T+
Sbjct: 644 R--PVQLDETHPYTVTSVSCCHGNTL 667
Score = 183 (69.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PT 562
+P+ V ++ ++ VACG T LT G + + GS G LG GS PT
Sbjct: 372 QPQFVSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGSNGCLGH-GSLNDISQPT 430
Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
+E + + ++ +ACG+ H+ +S++ E++ WG+G G+LG G E+ P LV
Sbjct: 431 IVEALLGYEMVQ-VACGASHVLALSTERELFAWGRGDGGRLGLGTRESHCCPQLVPMPPG 489
Query: 623 KQVKSVVCG 631
++ + VVCG
Sbjct: 490 QEAQRVVCG 498
Score = 159 (61.0 bits), Expect = 9.0e-08, P = 9.0e-08
Identities = 56/185 (30%), Positives = 88/185 (47%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG----------- 329
R P+++ +AQ + CG ++++T GQ + G KLG
Sbjct: 475 RESHCCPQLVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDPLSLGEEPA 534
Query: 330 -HG-VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTL-SGDLYTWGDGIHNLGLLGQV 385
H VE V++ L A L+ + V G H+ AVT SGD YT+G +V
Sbjct: 535 PHQQVEEAVTFTPLGSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGSNAR------RV 588
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S P +V G ++G++IS++ CG T AI + G++F++G G G LG D + +
Sbjct: 589 SRA----PCRVQG-LQGIKISTVACGDAFTVAIGAEGEVFSWGKGARGRLGRKDEDA-GL 642
Query: 446 PREVE 450
PR V+
Sbjct: 643 PRPVQ 647
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 787 SRRVSRAPSPIS-----RKSSPACSITMNSFTDLANSE-VIFEYSK 826
+RRVSRAP + + S+ AC ++FT +E +F + K
Sbjct: 585 ARRVSRAPCRVQGLQGIKISTVACG---DAFTVAIGAEGEVFSWGK 627
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 183 (69.5 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 34/79 (43%), Positives = 55/79 (69%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L + + G++HA+L+ + GQ+FSWG G G+LGHG +EA++ P+L++AL G + VA
Sbjct: 161 LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELE-PRLLEALQGLRMAEVA 219
Query: 355 CGEFHTCAVTLSGDLYTWG 373
G +H+ V+ +GD+Y WG
Sbjct: 220 AGGWHSVCVSETGDIYIWG 238
Score = 141 (54.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
+P L+D GS+ +CG HT VT +G+LYTWG G + G LG S P +V
Sbjct: 292 FPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHKDSTSSDQPCRVE 349
Query: 398 GQMEG-LQISSICCGPWHT 415
+E L++ ++ CGPW+T
Sbjct: 350 YFVERQLEVRAVTCGPWNT 368
Score = 136 (52.9 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCG 631
+CGS H AVV+ E+YTWG G GQLGH D+ + P VE ++Q V++V CG
Sbjct: 308 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCG 364
Score = 134 (52.2 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 69/266 (25%), Positives = 107/266 (40%)
Query: 313 KQGQIFSWGE-GSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVT------ 364
+QG F +G G G LG G + V P+ + A + ++ V+ +T VT
Sbjct: 5 RQGAWFGFGFCGFGQALGSGNGQHAVHSPEPLHAAD--DVCQVSASWSYTALVTRGGRVE 62
Query: 365 LSGDLYTWGDGIHNL----GLL-------GQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
LSG + DG ++ GLL G +E+ W+P Q E L + ++ G
Sbjct: 63 LSGSVSCAADGCRDVWASEGLLVVQRNKSGSGTELQAWVPGSAL-QGEPLWVQNLASGA- 120
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK-ELKTVMASCGVWHTAAIVE 472
G G T L T P + L EL+ G H + E
Sbjct: 121 KAQGEDEPGSEPRMG--TLPLLPCARAYMTPQPPFCQPLAPELRVRQLQLGAEHALLLCE 178
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
AG+ +F+WG G GQLGHG E + P ++ + +VA G ++
Sbjct: 179 -AGQ-----------VFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEVAAGGWHSV 226
Query: 533 ALTATGQVFSMGSADYGQLGSPGSTG 558
++ TG ++ G + GQL P +G
Sbjct: 227 CVSETGDIYIWGWNESGQLALPTRSG 252
Score = 131 (51.2 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHT 467
CG HTA +T G+L+T+G G +G LGH D +S+ P VE ++L+ +CG W+T
Sbjct: 309 CGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCGPWNT 368
Score = 128 (50.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 28/109 (25%), Positives = 49/109 (44%)
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK 569
P C ++ ++ ++ G + L GQVFS G +GQLG + R+ ++
Sbjct: 152 PFCQPLAPELRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQ 211
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
+ ++A G +H VS ++Y WG +GQL + T+ E
Sbjct: 212 GLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVRE 260
Score = 125 (49.1 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 33/125 (26%), Positives = 61/125 (48%)
Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
+ + G H + +G +++WG G H G LG S + PR + ++GL+++ +
Sbjct: 163 VRQLQLGAEHALLLCEAGQVFSWGGGRH--GQLGHGSLEAELEPRLLEA-LQGLRMAEVA 219
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV-WHTA 468
G WH+ ++ G ++ +G G L RS T E +T++E T + G+ A
Sbjct: 220 AGGWHSVCVSETGDIYIWGWNESGQLALPTRSGT----EKKTVREEATELNDDGLRGEEA 275
Query: 469 AIVEV 473
A+ +V
Sbjct: 276 ALADV 280
Score = 119 (46.9 bits), Expect = 0.00079, P = 0.00079
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL- 345
P +L+ + DA +CGS+H +VT+ G++++WG G G+LGH P ++
Sbjct: 293 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFV 352
Query: 346 -NGSNIHMVACGEFHT 360
+ V CG ++T
Sbjct: 353 ERQLEVRAVTCGPWNT 368
Score = 99 (39.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY-IEDIACGS 580
K +CG T +T TG++++ G YGQLG ST P R+E ++ + + + CG
Sbjct: 306 KASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSSDQPCRVEYFVERQLEVRAVTCGP 365
Query: 581 YHIAVVSSKSE 591
++ V + + E
Sbjct: 366 WNTYVYAVERE 376
Score = 80 (33.2 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 25/72 (34%), Positives = 31/72 (43%)
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--V 515
V ASCG HTA + +L+TWG G GQLGH D+ P V+ V
Sbjct: 305 VKASCGSRHTAVVTRTG------------ELYTWGWGKYGQLGHKDSTSSDQPCRVEYFV 352
Query: 516 SDDISFCKVACG 527
+ V CG
Sbjct: 353 ERQLEVRAVTCG 364
Score = 78 (32.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
L P++LE+ L +A G H+V V++ G I+ WG G+L
Sbjct: 202 LEPRLLEALQGLRMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 245
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 270 (100.1 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 91/304 (29%), Positives = 138/304 (45%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPK-LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-- 373
+F+WG S G+LG G + DV P+ L D ++ + G H+ VT GDL+ G
Sbjct: 17 LFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLN 76
Query: 374 -DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TAAITSAGKLFTFGDGT 431
DG LGL G +I ++ P K + G I + CG W T +T G++ + G +
Sbjct: 77 KDG--QLGL-GHTEDIPYFTPCK---SLFGCPIQQVACG-WDFTIMLTENGQVLSCGSNS 129
Query: 432 FGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
FG LG HG R VP+ +E KE K V + G+ H VA SG +F
Sbjct: 130 FGQLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHA-----VAATASGI-------VF 175
Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDD-----ISFCKVAC---GHSITIALTATGQVF 541
WG G G + +PL + + K C G + +LT G+V+
Sbjct: 176 QWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGEVY 234
Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
GS +GQL + + P +IE + ++ + I G H+ + +++TWG+
Sbjct: 235 VWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADY 294
Query: 601 GQLG 604
GQLG
Sbjct: 295 GQLG 298
Score = 267 (99.0 bits), Expect = 5.1e-20, P = 5.1e-20
Identities = 105/384 (27%), Positives = 164/384 (42%)
Query: 281 RRDALLPKVLESTVV-LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
+ D LLP+ L + I G H+ +VT G +F G G+LG G D+ Y
Sbjct: 33 KEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEDIPYF 92
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
+L G I VACG T +T +G + + G ++ G LG + H R V Q
Sbjct: 93 TPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGS--NSFGQLG----VPHGPRRCVVPQ 146
Query: 400 MEGLQISSICC---GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
L + C G H A T++G +F +G G + G ++P T KE
Sbjct: 147 AIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFF-TAKEPS 204
Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
V G+ ++ A+ +AG ++ + +++ WG GQL + E +P+ K+
Sbjct: 205 RVT---GLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN---EAAFLPVPQKIE 258
Query: 517 ----DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST--G-------KF--- 560
+ + G + +A T TG++F+ G ADYGQLG T G F
Sbjct: 259 AHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPC 318
Query: 561 --PTRIEGNIKHRYI--EDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
P + H +++CGS H +A++ Y+WG +G G G N P
Sbjct: 319 SRPPNSMPSSPHCLTGATEVSCGSEHNLAIIGGVC--YSWGWNEHGMCGDGTEANVWAPK 376
Query: 616 LVEALRDKQVKSVVCGSNFTAAIC 639
V+AL V CG+ + A+C
Sbjct: 377 PVQALLSSSGLLVGCGAGHSLALC 400
Score = 188 (71.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 70/238 (29%), Positives = 106/238 (44%)
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
P + A +A LF +G ++G LG G + +P+++ + ++V G +A+V
Sbjct: 5 PSASEAAPAAAALFAWGANSYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVV 64
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVPLCVKVSDDISFCKVACGHS 529
T G + LF G +GQLG G E P P C K +VACG
Sbjct: 65 -----TDGGD------LFVCGLNKDGQLGLGHTEDIPYFTP-C-KSLFGCPIQQVACGWD 111
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
TI LT GQV S GS +GQLG P + P IE + K + + IA G H +
Sbjct: 112 FTIMLTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELH-KEKVV-CIAAGLRHAVAAT 169
Query: 588 SKSEVYTWGKG---ANGQLGHGDNE----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ V+ WG G +L G + P+ V L + + V+ GS+ +A++
Sbjct: 170 ASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 227
Score = 188 (71.2 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 80/288 (27%), Positives = 130/288 (45%)
Query: 362 AVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A + L+ WG + LGL G ++ +P++++ + + I G H+A +T
Sbjct: 10 AAPAAAALFAWGANSYGQLGL-GHKEDVL--LPQQLNDFCKPRSVRRITGGGGHSAVVTD 66
Query: 421 AGKLFTFG---DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
G LF G DG G LGH + P ++L +CG T + E
Sbjct: 67 GGDLFVCGLNKDGQLG-LGHTEDIPYFTP--CKSLFGCPIQQVACGWDFTIMLTE----- 118
Query: 478 SGSNGLSSKKLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIA 533
NG ++ + G + GQLG HG PR VVP +++ + C +A G +A
Sbjct: 119 ---NG----QVLSCGSNSFGQLGVPHG---PRRCVVPQAIELHKEKVVC-IAAGLRHAVA 167
Query: 534 LTATGQVFSMGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAV 585
TA+G VF G+ A G+ PG T K P+R+ G +++ + GS H A
Sbjct: 168 ATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSAS 226
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG 631
++ EVY WG +GQL + + P +EA ++++V ++ G
Sbjct: 227 LTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSG 273
Score = 147 (56.8 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 48/193 (24%), Positives = 80/193 (41%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVAC 355
A + GS H+ +T G+++ WG G+L + A + P+ I+A + +
Sbjct: 214 AMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA-AFLPVPQKIEAHCFQNEKVTAIWS 272
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRK------VSGQMEGLQISSI 408
G H A T +G ++TWG + G LG+ E W K S + S
Sbjct: 273 GWTHLVAQTETGKMFTWGRA--DYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPH 330
Query: 409 C--------CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
C CG H AI G +++G G G G ++ P+ V+ L ++
Sbjct: 331 CLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLV 389
Query: 461 SCGVWHTAAIVEV 473
CG H+ A+ ++
Sbjct: 390 GCGAGHSLALCQL 402
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 288 (106.4 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 92/326 (28%), Positives = 145/326 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA- 334
+ DR PK +E Q ++CGS V +T +GQ++S+G G LG A
Sbjct: 388 LGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAG 447
Query: 335 -DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+V P L+D + V+CG+ H A+T S +Y+WG G + G LG SE + P
Sbjct: 448 SEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEY--GRLGLDSEDDVYSP 505
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+KV Q GL I ++CCG + +T GK+ G LG ++ + E
Sbjct: 506 QKVEVQ-RGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEV 564
Query: 454 ELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPL 511
T + I ++ G+T + +L T+G GQLG GD + + L
Sbjct: 565 PYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINL 624
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKFPTR 563
+V+CG T A TA +F+ G+ G+L +P GS +P
Sbjct: 625 LGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRP 684
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSK 589
I G++ H + D++C +H ++ K
Sbjct: 685 IFGSLHH--VTDLSCRGWHTILIVEK 708
Score = 287 (106.1 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
Identities = 82/327 (25%), Positives = 144/327 (44%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G H +VT + ++++W GG +LGHG A PK ++ L G ++
Sbjct: 353 ARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQK 412
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQV-SEISHWIPRKVSGQMEGLQISSICC 410
V+CG T +T G LY++G + LG+ SE+ P V + + + C
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQSAGSEVLE--PLLVDFFLNE-PVDQVSC 469
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H A+T + ++++G G +G LG P++VE + L V CG + +
Sbjct: 470 GDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGS-DGSFL 528
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC---G 527
+ + GK GL+ G + H + + ++ +SF K+ G
Sbjct: 529 LTLTGKVLAC-GLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPG 587
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFP--TRIEGNIKHRYIEDIACGSYHIAV 585
+ T A+ G++ + GS GQLG G K + G + + + ++CG
Sbjct: 588 RTHTAAIDERGRLLTFGSNKCGQLGV-GDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQ 612
++ + ++ WG G NG+L NE Q
Sbjct: 647 ATADNHIFAWGNGGNGRLAMTPNERPQ 673
Score = 286 (105.7 bits), Expect = 4.6e-20, Sum P(2) = 4.6e-20
Identities = 99/353 (28%), Positives = 149/353 (42%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS-NIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK + P+ +D G V G+ H VT+
Sbjct: 322 AVVTSRSSEVYVWG---GGK---------TTPQKLDVFKGGWRARQVCAGDAHFAVVTVE 369
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG S+ P+ V +++G + + CG T IT
Sbjct: 370 KELYTWVNMQGGSKLH--GQLGHGDRASYRQPKHVE-KLQGKSVQKVSCGSDFTVCITDE 426
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L++FG +G LG + + V P V+ SCG H A+
Sbjct: 427 GQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTR------- 479
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATG 538
SK +++WG G G+LG D+E V P V+V + V CG + LT TG
Sbjct: 480 -----SKSVYSWGCGEYGRLGL-DSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTG 533
Query: 539 QVFSMGSADYGQLGSPGSTG---------KFP----TRIEGNIKHRYIEDIACGSYHIAV 585
+V + G ++ +LG T + P + + I I+ G H A
Sbjct: 534 KVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAA 593
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + + T+G GQLG GD L+ L KQV V CG FT A
Sbjct: 594 IDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Score = 185 (70.2 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 74/267 (27%), Positives = 119/267 (44%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF-----GDGTFGALGHGDRSSTSVPR 447
P+K+ G + +C G H A +T +L+T+ G G LGHGDR+S P+
Sbjct: 341 PQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPK 400
Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEP 506
VE L+ SCG T I + G +L+++G G LG + A
Sbjct: 401 HVEKLQGKSVQKVSCGSDFTVCITD--------EG----QLYSFGSDYYGCLGVNQSAGS 448
Query: 507 RVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRI 564
V+ PL V + +V+CG S +ALT + V+S G +YG+LG + P ++
Sbjct: 449 EVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKV 508
Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD------NEN--KQTP-- 614
E + I ++ CGS +++ +V G + +LG N ++ P
Sbjct: 509 EVQ-RGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYT 567
Query: 615 ---TLVEALRDKQVKSVVCGSNFTAAI 638
TL + L +++S+ G TAAI
Sbjct: 568 TSLTLAKQLSFYKIRSISPGRTHTAAI 594
Score = 39 (18.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 27 LLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSR 68
+L +G G+ +R + D+ L++W KE +LS R
Sbjct: 39 VLGHGAYGEATL--YRRTEDDSLVVW---KEVGLARLSEKER 75
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 171 (65.3 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 52/175 (29%), Positives = 87/175 (49%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++++WG G +GQLGHGD PR+ PLCVK D +++ G ++ALTA QV+S GS
Sbjct: 522 EVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALTAKSQVYSWGSN 581
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE----VYTWGKG-ANG 601
+GQLG S P R+ + + A GS + ++ + + +Y G+ A
Sbjct: 582 IFGQLGHTNSPTTVP-RL-AKVCGDGVWSTAAGSDYSLFLADEEDFQPGLYYCGQETATD 639
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS--IAD-HSICS 653
L +N +K L+ + + +V+ G + + + K + IA H + S
Sbjct: 640 NLSE-NNCSKNPVLLLSCSKIGYISNVIAGGD-NCLVLVDKNIMGYIASLHELAS 692
Score = 163 (62.4 bits), Expect = 6.0e-20, Sum P(2) = 6.0e-20
Identities = 52/192 (27%), Positives = 94/192 (48%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
LP + TV L A A G+ H +L+T+ G+++S+G+ + G E + P L + L
Sbjct: 35 LPGLCGKTV-LQA---ALGTNHGLLLTEGGEVYSFGK-LPWRSGPE-EFCANSPILENTL 88
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ----ME 401
G ++ VA G FH AVT G +Y WG+ + + P +S +
Sbjct: 89 LGQHVITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLL 148
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMA 460
+++ + CG HT A++ + +++ +G G LG + + P++VE L +
Sbjct: 149 SVRVLQLACGEEHTLALSLSREIWAWGSGC--QLGLITTTFPVTKPQKVEHLAGRVVLQI 206
Query: 461 SCGVWHTAAIVE 472
+CG +H+ A+V+
Sbjct: 207 ACGAYHSLALVQ 218
Score = 139 (54.0 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 45/162 (27%), Positives = 73/162 (45%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
G A+L + + +++SWG G G+LGHG P + +L+G + ++ G H+ A+
Sbjct: 510 GEADALLPSLRTEVWSWGRGKDGQLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLAL 569
Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC-GPWHTAAITSAG 422
T +Y+WG I G LG + + +PR ++ +C G W TAA S
Sbjct: 570 TAKSQVYSWGSNI--FGQLGHTNSPTT-VPR----------LAKVCGDGVWSTAA-GSDY 615
Query: 423 KLFTFGDGTF--GALGHGDRSSTSVPREVETLKELKTVMASC 462
LF + F G G ++T E K ++ SC
Sbjct: 616 SLFLADEEDFQPGLYYCGQETATDNLSENNCSKN-PVLLLSC 656
Score = 130 (50.8 bits), Expect = 0.00036, P = 0.00036
Identities = 56/222 (25%), Positives = 93/222 (41%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVS-GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
G L L G +S++S + RKV +M + ++ G + +++++G G G
Sbjct: 473 GSRRLSLPGLLSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDG 532
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD P V++L + + S G H+ A+ + ++++WG
Sbjct: 533 QLGHGDVLPRLQPLCVKSLDGKEVIQLSAGGHHSLALT------------AKSQVYSWGS 580
Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG- 552
GQLGH ++ P VP KV D A G ++ L A + F G GQ
Sbjct: 581 NIFGQLGHTNS-PTTVPRLAKVCGD-GVWSTAAGSDYSLFL-ADEEDFQPGLYYCGQETA 637
Query: 553 ----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
S + K P + K YI ++ G + V+ K+
Sbjct: 638 TDNLSENNCSKNPVLLLSCSKIGYISNVIAGGDNCLVLVDKN 679
Score = 126 (49.4 bits), Expect = 0.00096, P = 0.00096
Identities = 52/206 (25%), Positives = 95/206 (46%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P ++ G + G + G H +T G++++FG + + G + + S P TL
Sbjct: 32 PERLPG-LCGKTVLQAALGTNHGLLLTEGGEVYSFGKLPWRS-GPEEFCANS-PILENTL 88
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PL 511
+ + G +H A+ E G+ ++ WG+ + GQ + +P V P
Sbjct: 89 LGQHVITVAAGSFHNGAVTE--------GGV----VYMWGNNSSGQCAVAN-QPYVPEPQ 135
Query: 512 CVKVSDD-------ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI 564
+ +SD + ++ACG T+AL+ + ++++ GS QLG +T FP
Sbjct: 136 PISISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWGSGC--QLGLITTT--FPVTK 191
Query: 565 EGNIKH---RYIEDIACGSYH-IAVV 586
++H R + IACG+YH +A+V
Sbjct: 192 PQKVEHLAGRVVLQIACGAYHSLALV 217
Score = 114 (45.2 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 49/207 (23%), Positives = 88/207 (42%)
Query: 438 GDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G++ +P T L +++ASC +A V VA T + LS KK+ +
Sbjct: 369 GEQIGACIPGPPGTSASALNSLVASCA---SAVGVRVAA-TYEAGALSLKKVMNFYGTPA 424
Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
+ G P +K S + + + +L + S G + +L PG
Sbjct: 425 NEPGPQPGSGSTGPEALKDSREEQVKLESMQGKKSSSLVDIREEESEGGSR--RLSLPGL 482
Query: 557 TGKFPTRIEGNIKHRYIEDIAC-----GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
+ R+ + + +A G + S ++EV++WG+G +GQLGHGD +
Sbjct: 483 LSQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHGDVLPR 542
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
P V++L K+V + G + + A+
Sbjct: 543 LQPLCVKSLDGKEVIQLSAGGHHSLAL 569
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 175 (66.7 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 34/79 (43%), Positives = 54/79 (68%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L A+ + G++HA+L+ GQ+FSWG G G+LGHG +EA+ P++++AL G + VA
Sbjct: 164 LRARRLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAERE-PRVLEALQGLPMAEVA 222
Query: 355 CGEFHTCAVTLSGDLYTWG 373
G +H+ V+ +GD+Y WG
Sbjct: 223 AGGWHSVCVSETGDIYIWG 241
Score = 139 (54.0 bits), Expect = 8.0e-20, Sum P(2) = 8.0e-20
Identities = 31/68 (45%), Positives = 38/68 (55%)
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCGSNF 634
+CGS H AVV+ E+YTWG G GQLGH D + P VE DKQ V++V CG
Sbjct: 312 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWN 371
Query: 635 TAAICLHK 642
T + K
Sbjct: 372 TYVFAVEK 379
Score = 138 (53.6 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
+P L+D GS+ +CG HT VT +G+LYTWG G + G LG S P +V
Sbjct: 296 FPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHKDTTSLDRPCRVE 353
Query: 398 GQMEG-LQISSICCGPWHT 415
++ LQ+ ++ CGPW+T
Sbjct: 354 YFVDKQLQVRTVSCGPWNT 372
Score = 134 (52.2 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHT 467
CG HTA +T G+L+T+G G +G LGH D +S P VE K+L+ SCG W+T
Sbjct: 313 CGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWNT 372
Score = 122 (48.0 bits), Expect = 0.00038, P = 0.00038
Identities = 23/76 (30%), Positives = 43/76 (56%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P +L+ + DA +CGS+H +VT+ G++++WG G G+LGH + P ++
Sbjct: 297 PALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 356
Query: 347 GSNIHM--VACGEFHT 360
+ + V+CG ++T
Sbjct: 357 DKQLQVRTVSCGPWNT 372
Score = 113 (44.8 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++F+WG G GQLGHG E P ++ + +VA G ++ ++ TG ++ G
Sbjct: 184 QVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWN 243
Query: 547 DYGQLGSP 554
+ GQL P
Sbjct: 244 ESGQLALP 251
Score = 111 (44.1 bits), Expect = 7.4e-13, Sum P(2) = 7.4e-13
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H + +AG++F++G G G LGHG + PR +E L+ L + G WH+ +
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAEREPRVLEALQGLPMAEVAAGGWHSVCV 231
Query: 471 VE 472
E
Sbjct: 232 SE 233
Score = 104 (41.7 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G H + +G +++WG G H G LG + + PR + ++GL ++ + G WH+
Sbjct: 172 GAEHALLLDAAGQVFSWGGGRH--GQLGHGTLEAEREPRVLEA-LQGLPMAEVAAGGWHS 228
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRS 441
++ G ++ +G G L RS
Sbjct: 229 VCVSETGDIYIWGWNESGQLALPARS 254
Score = 101 (40.6 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 36/125 (28%), Positives = 55/125 (44%)
Query: 473 VAGKTSGSN--GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
+ G G N G +K+ DG G +P L + + D K +CG
Sbjct: 262 ITGDAPGLNEDGSEAKRATEGEDG--GPTPFIAVQPFPALLDLPLGSDA--VKASCGSRH 317
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNI-KHRYIEDIACG---SYHIAV 585
T +T TG++++ G YGQLG +T P R+E + K + ++CG +Y AV
Sbjct: 318 TAVVTRTGELYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQLQVRTVSCGPWNTYVFAV 377
Query: 586 VSSKS 590
KS
Sbjct: 378 EKEKS 382
Score = 81 (33.6 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
P+VLE+ L +A G H+V V++ G I+ WG G+L
Sbjct: 207 PRVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 248
Score = 79 (32.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 25/72 (34%), Positives = 31/72 (43%)
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--V 515
V ASCG HTA + +L+TWG G GQLGH D P V+ V
Sbjct: 309 VKASCGSRHTAVVTRTG------------ELYTWGWGKYGQLGHKDTTSLDRPCRVEYFV 356
Query: 516 SDDISFCKVACG 527
+ V+CG
Sbjct: 357 DKQLQVRTVSCG 368
Score = 45 (20.9 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 489 FTWGDGAEGQ-LGHGDAEPRVVPLCVKVSD-DISFCKVACGHSITIALTATGQVFSMGSA 546
F +G GQ LG G P ++V + C+V+ S T +T G++ GS
Sbjct: 10 FGFGFCGFGQALGSGRGRQVYSPEPLEVPGASLDVCRVSASWSYTATVTRGGRLELSGSV 69
Query: 547 DYGQLG 552
G G
Sbjct: 70 S-GSAG 74
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 284 (105.0 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 77/315 (24%), Positives = 137/315 (43%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G IH
Sbjct: 371 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQ 430
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +VS P +++ + + + CG
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSN-PVEQVSCGD 489
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P+ V+ K L V CG T + +
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHS 529
+GK GL+ G + H ++ +SF K+ A G +
Sbjct: 550 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKT 607
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSS 588
T A+ G++ + G GQLG + + G + + + ++CG +
Sbjct: 608 HTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667
Query: 589 KSEVYTWGKGANGQL 603
+ ++ WG G NG+L
Sbjct: 668 DNHIFAWGNGGNGRL 682
Score = 273 (101.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 96/352 (27%), Positives = 151/352 (42%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 388 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIHQVSCGDDFTVCVTDE 444
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G S V P ++ SCG H +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 497
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 540 VFSMGSADYGQLG-SPGSTG--------KFPTRIEGNIKHR---Y-IEDIACGSYHIAVV 586
V + G ++ +LG + +G + P + + Y I IA G H A +
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 244 (91.0 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 90/329 (27%), Positives = 150/329 (45%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D+ PK +E ++CG V VT +GQ++++G G +G V+
Sbjct: 406 LGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTDEGQLYAFGSDYYGCMG--VDK- 462
Query: 336 VSYPKLIDA--LNG--SN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
VS P++++ LN SN + V+CG+ H +T + ++Y+WG G + G LG SE +
Sbjct: 463 VSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDY 520
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
+ P++V + L I ++ CG T +T +GK+ G F LG S + E
Sbjct: 521 YTPQRVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAY 579
Query: 451 TLKELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV- 508
T I +A GKT + +L T+G GQLG G+ + R+
Sbjct: 580 HEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLG 639
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKF 560
+ L +V+CG TIA T +F+ G+ G+L +P GS +
Sbjct: 640 INLLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSW 699
Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
P I G++ H + D++C +H ++ K
Sbjct: 700 PRPIFGSLHH--VPDLSCRGWHTILIVEK 726
Score = 162 (62.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 73/283 (25%), Positives = 123/283 (43%)
Query: 384 QVSEISHW-----IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD---GT--FG 433
+ SE+ W P+K+ G +C G H A +T +L+T+ + GT G
Sbjct: 345 RTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHG 404
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD++S P+ VE L+ SCG T + + G +L+ +G
Sbjct: 405 QLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD--------EG----QLYAFGS 452
Query: 494 GAEGQLGHGDAE-PRVV-PLCVK--VSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
G +G P V+ P+ + +S+ + +V+CG + + LT +V+S G +YG
Sbjct: 453 DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYG 510
Query: 550 QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK------GAN-- 600
+LG + P R++ K I + CG +++ +V G G N
Sbjct: 511 RLGLDSEEDYYTPQRVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQC 569
Query: 601 --GQLGH-GDNENKQTP--TLVEALRDKQVKSVVCGSNFTAAI 638
G + H +E T TL + L +++++ G TAAI
Sbjct: 570 MSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Score = 137 (53.3 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 32/85 (37%), Positives = 45/85 (52%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K + V C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 433
Query: 631 GSNFTAAICLHKGVSIADHSICSGC 655
G +FT + +G A S GC
Sbjct: 434 GDDFTVCVT-DEGQLYAFGSDYYGC 457
Score = 38 (18.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 41 FRLSSDEKLLIWYAGKEEKQLKLSHVSR 68
+R + D+ L++W KE +LS R
Sbjct: 69 YRRTEDDSLVVW---KEVDLTRLSEKER 93
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 262 (97.3 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 95/375 (25%), Positives = 160/375 (42%)
Query: 276 ISSADRRDALLPKVLESTVVLDA-QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ + D P+ +ES + + +++ G H+ L++ G++ G+ G+LG G
Sbjct: 50 LGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQNHKGQLGLGHTL 109
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-P 393
++ + + V+CG T + L+GD G + G LG +E +H P
Sbjct: 110 EIMTFQTCPLPGFGRVQQVSCGWDFT--IILTGDGLVLACGSNAFGQLGVSAEKTHSAEP 167
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+ E ++S+ G H A T++G ++ +G G H R P+ V +
Sbjct: 168 LLLKSFHE--PVTSVAAGLRHALASTASGCVYQWGTGLSS---HAKRMLN--PQPVPSHL 220
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE-PRVVPLC 512
K G H +AG + + +LF WG GQL G P V L
Sbjct: 221 SSKEPCLVPGFAHVTTQKVIAGSAHCACLTVNGELFLWGSNKHGQLISGSLFLPLPVALD 280
Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG------STGKFPTRIEG 566
+ D V G + +A T +G+VF+ G ++YGQLG S + R
Sbjct: 281 RSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPV 340
Query: 567 NIKHRY-IEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
+K + I+CGS H +AVV + V++WG +G G G ++ P + AL D
Sbjct: 341 EVKALFGATQISCGSEHNLAVVGGR--VFSWGWNEHGMCGDGSLQDITQPQPIPALADAV 398
Query: 625 VKSVVCGSNFTAAIC 639
+ CG+ + A+C
Sbjct: 399 ALLIGCGAGHSMALC 413
Score = 230 (86.0 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 94/355 (26%), Positives = 153/355 (43%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
+++WG S G+LG G D + P+ +++ L I V G H+ ++ SG+L G
Sbjct: 39 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTGGGGHSALISDSGELLVCGQN 98
Query: 376 IHN--LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-TAAITSAGKLFTFGDGTF 432
H LGL G EI + + G G ++ + CG W T +T G + G F
Sbjct: 99 -HKGQLGL-GHTLEIMTFQTCPLPGF--G-RVQQVSCG-WDFTIILTGDGLVLACGSNAF 152
Query: 433 GALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS--KKLF 489
G LG +++ ++ P +++ E T +A+ G+ H A GLSS K++
Sbjct: 153 GQLGVSAEKTHSAEPLLLKSFHEPVTSVAA-GLRHALASTASGCVYQWGTGLSSHAKRML 211
Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
L EP +VP V+ KV G + LT G++F GS +G
Sbjct: 212 N-PQPVPSHLS--SKEPCLVPGFAHVTTQ----KVIAGSAHCACLTVNGELFLWGSNKHG 264
Query: 550 QLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
QL S P ++ + ++ + D+ G H+ + V+TWG+ GQLG ++
Sbjct: 265 QLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYGQLGQTNH 324
Query: 609 E-NKQT--------PTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA--DHSIC 652
KQ+ P V+AL + CGS A+ + S +H +C
Sbjct: 325 SMEKQSCDEHLVRSPVEVKALFG--ATQISCGSEHNLAVVGGRVFSWGWNEHGMC 377
Score = 186 (70.5 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 86/308 (27%), Positives = 129/308 (41%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGE 357
Q ++CG +++T G + + G + G+LG E S P L+ + + + VA G
Sbjct: 126 QQVSCGWDFTIILTGDGLVLACGSNAFGQLGVSAEKTHSAEPLLLKSFH-EPVTSVAAGL 184
Query: 358 FHTCAVTLSGDLYTWGDGI--HNLGLLGQV---SEISHWIPRKVSGQMEGLQISSICCGP 412
H A T SG +Y WG G+ H +L S +S P V G + + G
Sbjct: 185 RHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPG-FAHVTTQKVIAGS 243
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H A +T G+LF +G G L G S +P V + + V H+
Sbjct: 244 AHCACLTVNGELFLWGSNKHGQLISG---SLFLPLPVALDRSMLQDERVSDV-HSGWTHL 299
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLG---HG----DAEPRVVPLCVKVSDDISFCKVA 525
VA SG ++FTWG GQLG H + +V V+V +++
Sbjct: 300 VAQTESG-------RVFTWGRSNYGQLGQTNHSMEKQSCDEHLVRSPVEVKALFGATQIS 352
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYH- 582
CG +A+ G+VFS G ++G G GS P I + I CG+ H
Sbjct: 353 CGSEHNLAVVG-GRVFSWGWNEHGMCGD-GSLQDITQPQPIPA-LADAVALLIGCGAGHS 409
Query: 583 IAVVSSKS 590
+A+ S KS
Sbjct: 410 MALCSLKS 417
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 176 (67.0 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L + + G++H +L+ GQ+FSWG G G+LGHG +EA++ P+L++AL G + VA
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELE-PRLLEALQGLRMAKVA 219
Query: 355 CGEFHTCAVTLSGDLYTWG 373
G +H+ ++ +GD+Y WG
Sbjct: 220 AGGWHSVCLSETGDIYIWG 238
Score = 140 (54.3 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
+P L+D GS+ M +CG HT VT +G+LYTWG G + G LG S P V
Sbjct: 291 FPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKY--GQLGHKDSTSLDRPCCVE 348
Query: 398 GQMEG-LQISSICCGPWHT 415
+E L++ ++ CGPW+T
Sbjct: 349 YFVERQLEVRAVTCGPWNT 367
Score = 135 (52.6 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCG 631
+CGS H AVV+ E+YTWG G GQLGH D+ + P VE ++Q V++V CG
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCG 363
Score = 127 (49.8 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++F+WG G GQLGHG E + P ++ + KVA G ++ L+ TG ++ G
Sbjct: 181 QVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWN 240
Query: 547 DYGQLGSPGSTG 558
+ GQL P +G
Sbjct: 241 ESGQLALPTRSG 252
Score = 127 (49.8 bits), Expect = 0.00010, P = 0.00010
Identities = 29/105 (27%), Positives = 49/105 (46%)
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK 569
P C ++ ++ ++ G + L A GQVFS G+ +GQLG + R+ ++
Sbjct: 152 PFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQ 211
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG---HGDNENK 611
+ +A G +H +S ++Y WG +GQL ENK
Sbjct: 212 GLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENK 256
Score = 124 (48.7 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHT 467
CG HTA +T G+L+T+G G +G LGH D +S P VE ++L+ +CG W+T
Sbjct: 308 CGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNT 367
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 24/84 (28%), Positives = 43/84 (51%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL- 345
P +L+ + DA +CGS+H +VT+ G++++WG G G+LGH + P ++
Sbjct: 292 PALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 346 -NGSNIHMVACGEFHTCAVTLSGD 368
+ V CG ++T + D
Sbjct: 352 ERQLEVRAVTCGPWNTYVYAMERD 375
Score = 121 (47.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 28/106 (26%), Positives = 50/106 (47%)
Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
+ + G H + +G +++WG G H G LG + + PR + ++GL+++ +
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRH--GQLGHGTLEAELEPRLLEA-LQGLRMAKVA 219
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
G WH+ ++ G ++ +G G L RS T E E EL
Sbjct: 220 AGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATEL 265
Score = 118 (46.6 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 22/68 (32%), Positives = 40/68 (58%)
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
+ + G+ H+ ++ + +V++WG G +GQLGHG E + P L+EAL+ ++ V G
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGG 222
Query: 633 NFTAAICL 640
++CL
Sbjct: 223 --WHSVCL 228
Score = 115 (45.5 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
L++ + G H + +AG++F++G G G LGHG + PR +E L+ L+ +
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 463 GVWHTAAIVE 472
G WH+ + E
Sbjct: 221 GGWHSVCLSE 230
Score = 96 (38.9 bits), Expect = 1.7e-15, Sum P(2) = 1.7e-15
Identities = 27/72 (37%), Positives = 33/72 (45%)
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--V 515
VMASCG HTA + +L+TWG G GQLGH D+ P CV+ V
Sbjct: 304 VMASCGSRHTAVVTRTG------------ELYTWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 516 SDDISFCKVACG 527
+ V CG
Sbjct: 352 ERQLEVRAVTCG 363
Score = 83 (34.3 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRY-IEDIACGSYH 582
+CG T +T TG++++ G YGQLG ST P +E ++ + + + CG ++
Sbjct: 307 SCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWN 366
Query: 583 IAVVSSKSE 591
V + + +
Sbjct: 367 TYVYAMERD 375
Score = 75 (31.5 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 15/44 (34%), Positives = 25/44 (56%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
L P++LE+ L +A G H+V +++ G I+ WG G+L
Sbjct: 202 LEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL 245
Score = 65 (27.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 23/59 (38%), Positives = 31/59 (52%)
Query: 489 FTWGDGAEGQ-LGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
F +G GQ LG G++ V P + SDDI C+V+ G S T +T G+V GS
Sbjct: 10 FGFGFCGFGQALGSGNSHHSVYSPEPLHASDDI--CQVSAGWSYTALVTRGGRVELSGS 66
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 273 (101.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 95/336 (28%), Positives = 144/336 (42%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
+A G H + + G +++ G G+LG G + + P + VA G H+
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGTTHS 92
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
+ G L+ WG + G LGQ P V+GQ+ + S I G + S
Sbjct: 93 LGIKADGSLWAWGSNL--FGQLGQ--------PL-VNGQLATNKFSPIRIGTGNDWVAVS 141
Query: 421 AGKLFTFG---DGT--------FGALGHGDRSSTSVPREV--ETLKELKTVMASCGVWHT 467
AG+L +FG DGT FG LG G S P +V + L + V + G H
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHA 201
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
A+ + G+ L+ WG GQLG G P +K+ D + ++ G
Sbjct: 202 LAL-----QADGT-------LWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAG 249
Query: 528 HSITIALTATGQVFSMGSADYGQLGS----PGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
++AL A G ++S G +G+LG+ PG+ PTR+ ++ IA G+ H
Sbjct: 250 EMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRV--GTGSDWVA-IAAGALHT 306
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
+ V WG A G +G G N+ TPTL+ A
Sbjct: 307 VALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVA 342
Score = 271 (100.5 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 98/357 (27%), Positives = 159/357 (44%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE---ADVSYPKLIDALNGSNIHMV 353
D +I+ G H+V + G ++SWG+ G+LG+GV A+V+ P + GS+ +
Sbjct: 242 DWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAI 299
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
A G HT A+ +G + WG+ G +G + + P + + + +I G
Sbjct: 300 AAGALHTVALHRNGTVSAWGNNAQ--GAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTG 357
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVE 472
+ ++ + G +F +G G LG+G + + P TV+ A W VE
Sbjct: 358 VSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAP----------TVLSAGASAWLG---VE 404
Query: 473 VAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
G + S GL S L+ WG A GQLG G P +P+ V V ++ A G + +
Sbjct: 405 PGG--AFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPV-VGGAGNWRTTATGTAHS 461
Query: 532 IALTATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIED---IACGSYHIAVV 586
+A+ A G +++ G GQLG GST P +I D +A G H +
Sbjct: 462 VAVRADGTLWAWGDNSSGQLGI-GSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGL 520
Query: 587 SSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALR----DKQVKSVVCGSNFTAAI 638
+ +++WG GQLG G N+ TP + D+ +V G F+ A+
Sbjct: 521 KADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLAL 577
Score = 260 (96.6 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 98/370 (26%), Positives = 162/370 (43%)
Query: 287 PKVLESTVVL-DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
P ++ + V L + +IA G+ + V G +F WG G+LG+G V+ P ++ A
Sbjct: 337 PTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAG 396
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ + + G F + + +G L+ WG G LG + IP V G +
Sbjct: 397 ASAWLGVEPGGAF-SLGLRSNGTLWAWGGNAS--GQLGDGTTTPSAIPVPVVGGAGNWRT 453
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
++ G H+ A+ + G L+ +GD + G LG G + S P+++ T AS G
Sbjct: 454 TAT--GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITV-----TNPASAGND 506
Query: 466 HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSD----DI 519
TA VAG + S GL + L++WGD GQLG G R P+ + + D
Sbjct: 507 WTA----VAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDR 562
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS------PGSTGKFPTRI------EGN 567
++ VA G ++AL A G +++ G QLG+ P + P ++
Sbjct: 563 NWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTA 622
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
++ IA G H + + ++ WG + GQLG+G TP V S
Sbjct: 623 FNSSWVA-IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS 681
Query: 628 VVCGSNFTAA 637
+ G++ + A
Sbjct: 682 LAAGTSHSLA 691
Score = 256 (95.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 85/328 (25%), Positives = 149/328 (45%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS-NIHMVACGEFHTCA 362
G ++ + G +++WG + G+LG G + P + + G+ N A G H+ A
Sbjct: 406 GGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP--VPVVGGAGNWRTTATGTAHSVA 463
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQMEGLQISSICCGPWHTAAIT 419
V G L+ WGD ++ G LG S ++ P++++ G +++ G H+ +
Sbjct: 464 VRADGTLWAWGD--NSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLK 521
Query: 420 SAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
+ G L+++GD TFG LG G +S + P ++ T + G + + AG
Sbjct: 522 ADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVT--------GNPGNFDRNWVAVAAGGVF 573
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA--EP---RVVPLCVKVSD------DISFCKVACG 527
+ ++TWGD + QLG A P R VP + V+ + S+ +A G
Sbjct: 574 SLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAG 633
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVV 586
++L A G +++ G+ GQLG+ +T F P ++ Y+ +A G+ H
Sbjct: 634 QDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS-LAAGTSHSLAG 692
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTP 614
S ++ WG +GQLG G + P
Sbjct: 693 RSDGTLWAWGNNTSGQLGTGPHPGDADP 720
Score = 256 (95.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 80/317 (25%), Positives = 138/317 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
++A G +HA+ + G +++WG G+LG G + P + + ++ GE H
Sbjct: 193 AVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
+ A+ G L++WG + LG + + P +V G +I G HT A+
Sbjct: 253 SVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG---TGSDWVAIAAGALHTVAL 309
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
G + +G+ GA+G G ++ S P TL ++A + + AI AG
Sbjct: 310 HRNGTVSAWGNNAQGAVGDGTVANRSTP----TL-----IVAPVTLVNNVAIA--AGTGV 358
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
+ L++ +F WG GQLG+G P + ++ V G + ++ L + G
Sbjct: 359 SFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGAS-AWLGVEPGGAFSLGLRSNG 417
Query: 539 QVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
+++ G GQLG +T P + G + A G+ H V + ++ WG
Sbjct: 418 TLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNW--RTTATGTAHSVAVRADGTLWAWGD 475
Query: 598 GANGQLGHGDNENKQTP 614
++GQLG G TP
Sbjct: 476 NSSGQLGIGSTVAASTP 492
Score = 255 (94.8 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 88/330 (26%), Positives = 141/330 (42%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI--DALNGSNIHMVA 354
D +++ G + + G ++SWG G+LG G P + D L+ VA
Sbjct: 136 DWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVA 195
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
G H A+ G L+ WG + LG G + + P K+ + IS+ G
Sbjct: 196 AGGEHALALQADGTLWAWGANLTGQLGT-GGTGILPNPTPLKIGTDRDWTAISA---GEM 251
Query: 414 HTAAITSAGKLFTFGDGTFGALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
H+ A+ + G L+++G FG LG+G ++ + P V T + + A G HT A+
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAA--GALHTVAL 309
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKVACGHS 529
NG S WG+ A+G +G G R P L V ++ +A G
Sbjct: 310 HR--------NGTVS----AWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTG 357
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVS 587
++ ++ A G VF G GQLG+ G+ G PT + ++ G++ + +
Sbjct: 358 VSFSVLANGTVFGWGGNGAGQLGN-GTFGAVTAPTVLSAGAS-AWLGVEPGGAFSLGL-R 414
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
S ++ WG A+GQLG G P V
Sbjct: 415 SNGTLWAWGGNASGQLGDGTTTPSAIPVPV 444
Score = 240 (89.5 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 85/320 (26%), Positives = 140/320 (43%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVAC 355
D +IA G+ H V + + G + +WG + G +G G A+ S P LI A + N +A
Sbjct: 295 DWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAA 354
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS-GQMEGLQISSICCGPWH 414
G + +V +G ++ WG + G LG + + P +S G L + G
Sbjct: 355 GTGVSFSVLANGTVFGWGG--NGAGQLGNGTFGAVTAPTVLSAGASAWLGVEP---GGAF 409
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
+ + S G L+ +G G LG G + +++P V+ G W T A
Sbjct: 410 SLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP---------VPVVGGAGNWRTTATGTAH 460
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS----FCKVACGHSI 530
++G L+ WGD + GQLG G P + V++ S + VA G +
Sbjct: 461 SVAVRADGT----LWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAH 516
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE------GNIKHRYIEDIACGSYHIA 584
++ L A G ++S G +GQLG T T ++ GN ++ A G + +A
Sbjct: 517 SLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLA 576
Query: 585 VVSSKSEVYTWGKGANGQLG 604
+ + ++TWG + QLG
Sbjct: 577 L-QADGTIWTWGDNSLLQLG 595
Score = 231 (86.4 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 83/327 (25%), Positives = 141/327 (43%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKL--IDALNGSNIHMVAC 355
+++A G+ H++ + G +++WG G+LG V ++ K I G++ V+
Sbjct: 83 KTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSA 142
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP-RKVSGQMEGLQISSICCGPWH 414
GE + + G L++WG+ + G LG + +S P + V+ + + ++ G H
Sbjct: 143 GELTSFGLKGDGTLWSWGNNL--FGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEH 200
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
A+ + G L+ +G G LG G P ++ + S G H+ A+
Sbjct: 201 ALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVAL---- 256
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIA 533
K GS L++WG G+LG+G A P V +V + +A G T+A
Sbjct: 257 -KADGS-------LWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVA 308
Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
L G V + G+ G +G + PT I + IA G+ V + V
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTV 368
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEA 619
+ WG GQLG+G PT++ A
Sbjct: 369 FGWGGNGAGQLGNGTFGAVTAPTVLSA 395
Score = 228 (85.3 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 69/264 (26%), Positives = 127/264 (48%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN----GSNIHMVA 354
++ A G+ H+V V G +++WG+ S G+LG G S P+ I N G++ VA
Sbjct: 452 RTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVA 511
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRK-VSGQMEGLQIS--SICC 410
G H+ + G L++WGD + G LG + S+ P + V+G + ++
Sbjct: 512 GGGAHSLGLKADGTLWSWGD--NTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAA 569
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAA 469
G + A+ + G ++T+GD + LG T + R V +L ++++
Sbjct: 570 GGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPA--QLAVASPPSTAFNSSW 627
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
+ AG+ G + + L+ WG + GQLG+G P+ V ++ + + +A G S
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 530 ITIALTATGQVFSMGSADYGQLGS 553
++A + G +++ G+ GQLG+
Sbjct: 688 HSLAGRSDGTLWAWGNNTSGQLGT 711
Score = 211 (79.3 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 75/291 (25%), Positives = 133/291 (45%)
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRK-VSGQMEGLQ 404
G++ VA G H+ + G L++WGD + G LG + S+ P + V+G
Sbjct: 504 GNDWTAVAGGGAHSLGLKADGTLWSWGD--NTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 405 IS--SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMAS 461
+ ++ G + A+ + G ++T+GD + LG T + R V +L
Sbjct: 562 RNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPA--QLAVASPP 619
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
++++ + AG+ G + + L+ WG + GQLG+G P+ V ++ + +
Sbjct: 620 STAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPY 679
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGS---PGSTGKF-------PTRIEGNIKHR 571
+A G S ++A + G +++ G+ GQLG+ PG P RI +
Sbjct: 680 VSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVS 739
Query: 572 YIED--IA-CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT-LVE 618
+D +A G H A + S ++TWG+ +GQLG+G PT L+E
Sbjct: 740 AADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Score = 168 (64.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 62/244 (25%), Positives = 104/244 (42%)
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ + G H + S G L+ G FG LG G + + P +V G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP------------GT 81
Query: 465 WHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLG----HGD-AEPRVVPLCVKVSDD 518
W T A AG T+ S G+ + L+ WG GQLG +G A + P+ + +D
Sbjct: 82 WKTVA----AG-TTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGND 136
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE---GNIKH-RYIE 574
+ V+ G + L G ++S G+ +G+LG G+T P ++ + + RY+
Sbjct: 137 --WVAVSAGELTSFGLKGDGTLWSWGNNLFGELGD-GTTVSRPQPVQVVADPLSNGRYVA 193
Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
+A G H + + ++ WG GQLG G PT ++ D+ ++ G
Sbjct: 194 -VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 635 TAAI 638
+ A+
Sbjct: 253 SVAL 256
Score = 161 (61.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV--ACGE 357
+IA G H + + G +++WG S G+LG+GV P + +N + V A G
Sbjct: 629 AIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGT 686
Query: 358 FHTCAVTLSGDLYTWGDGIHN-LGL---LGQVSEIS---HWIPRKV--SGQMEGLQISSI 408
H+ A G L+ WG+ LG G ++ H +P ++ S + +
Sbjct: 687 SHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLV 746
Query: 409 C-CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
G H+AA+ S G L+T+G T G LG+G + +P
Sbjct: 747 ATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 273 (101.2 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 95/336 (28%), Positives = 144/336 (42%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
+A G H + + G +++ G G+LG G + + P + VA G H+
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPG----TWKTVAAGTTHS 92
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
+ G L+ WG + G LGQ P V+GQ+ + S I G + S
Sbjct: 93 LGIKADGSLWAWGSNL--FGQLGQ--------PL-VNGQLATNKFSPIRIGTGNDWVAVS 141
Query: 421 AGKLFTFG---DGT--------FGALGHGDRSSTSVPREV--ETLKELKTVMASCGVWHT 467
AG+L +FG DGT FG LG G S P +V + L + V + G H
Sbjct: 142 AGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHA 201
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
A+ + G+ L+ WG GQLG G P +K+ D + ++ G
Sbjct: 202 LAL-----QADGT-------LWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAG 249
Query: 528 HSITIALTATGQVFSMGSADYGQLGS----PGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
++AL A G ++S G +G+LG+ PG+ PTR+ ++ IA G+ H
Sbjct: 250 EMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRV--GTGSDWVA-IAAGALHT 306
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
+ V WG A G +G G N+ TPTL+ A
Sbjct: 307 VALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVA 342
Score = 271 (100.5 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 98/357 (27%), Positives = 159/357 (44%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE---ADVSYPKLIDALNGSNIHMV 353
D +I+ G H+V + G ++SWG+ G+LG+GV A+V+ P + GS+ +
Sbjct: 242 DWTAISAGEMHSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGT--GSDWVAI 299
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
A G HT A+ +G + WG+ G +G + + P + + + +I G
Sbjct: 300 AAGALHTVALHRNGTVSAWGNNAQ--GAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTG 357
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVE 472
+ ++ + G +F +G G LG+G + + P TV+ A W VE
Sbjct: 358 VSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAP----------TVLSAGASAWLG---VE 404
Query: 473 VAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
G + S GL S L+ WG A GQLG G P +P+ V V ++ A G + +
Sbjct: 405 PGG--AFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPV-VGGAGNWRTTATGTAHS 461
Query: 532 IALTATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIED---IACGSYHIAVV 586
+A+ A G +++ G GQLG GST P +I D +A G H +
Sbjct: 462 VAVRADGTLWAWGDNSSGQLGI-GSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGL 520
Query: 587 SSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALR----DKQVKSVVCGSNFTAAI 638
+ +++WG GQLG G N+ TP + D+ +V G F+ A+
Sbjct: 521 KADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLAL 577
Score = 260 (96.6 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 98/370 (26%), Positives = 162/370 (43%)
Query: 287 PKVLESTVVL-DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
P ++ + V L + +IA G+ + V G +F WG G+LG+G V+ P ++ A
Sbjct: 337 PTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAG 396
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ + + G F + + +G L+ WG G LG + IP V G +
Sbjct: 397 ASAWLGVEPGGAF-SLGLRSNGTLWAWGGNAS--GQLGDGTTTPSAIPVPVVGGAGNWRT 453
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
++ G H+ A+ + G L+ +GD + G LG G + S P+++ T AS G
Sbjct: 454 TAT--GTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITV-----TNPASAGND 506
Query: 466 HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSD----DI 519
TA VAG + S GL + L++WGD GQLG G R P+ + + D
Sbjct: 507 WTA----VAGGGAHSLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDR 562
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS------PGSTGKFPTRI------EGN 567
++ VA G ++AL A G +++ G QLG+ P + P ++
Sbjct: 563 NWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTA 622
Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
++ IA G H + + ++ WG + GQLG+G TP V S
Sbjct: 623 FNSSWVA-IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS 681
Query: 628 VVCGSNFTAA 637
+ G++ + A
Sbjct: 682 LAAGTSHSLA 691
Score = 256 (95.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 85/328 (25%), Positives = 149/328 (45%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS-NIHMVACGEFHTCA 362
G ++ + G +++WG + G+LG G + P + + G+ N A G H+ A
Sbjct: 406 GGAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP--VPVVGGAGNWRTTATGTAHSVA 463
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQMEGLQISSICCGPWHTAAIT 419
V G L+ WGD ++ G LG S ++ P++++ G +++ G H+ +
Sbjct: 464 VRADGTLWAWGD--NSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAHSLGLK 521
Query: 420 SAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
+ G L+++GD TFG LG G +S + P ++ T + G + + AG
Sbjct: 522 ADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVT--------GNPGNFDRNWVAVAAGGVF 573
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA--EP---RVVPLCVKVSD------DISFCKVACG 527
+ ++TWGD + QLG A P R VP + V+ + S+ +A G
Sbjct: 574 SLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPAQLAVASPPSTAFNSSWVAIAAG 633
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVV 586
++L A G +++ G+ GQLG+ +T F P ++ Y+ +A G+ H
Sbjct: 634 QDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVS-LAAGTSHSLAG 692
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTP 614
S ++ WG +GQLG G + P
Sbjct: 693 RSDGTLWAWGNNTSGQLGTGPHPGDADP 720
Score = 256 (95.2 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 80/317 (25%), Positives = 138/317 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
++A G +HA+ + G +++WG G+LG G + P + + ++ GE H
Sbjct: 193 AVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 360 TCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
+ A+ G L++WG + LG + + P +V G +I G HT A+
Sbjct: 253 SVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVG---TGSDWVAIAAGALHTVAL 309
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
G + +G+ GA+G G ++ S P TL ++A + + AI AG
Sbjct: 310 HRNGTVSAWGNNAQGAVGDGTVANRSTP----TL-----IVAPVTLVNNVAIA--AGTGV 358
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
+ L++ +F WG GQLG+G P + ++ V G + ++ L + G
Sbjct: 359 SFSVLANGTVFGWGGNGAGQLGNGTFGAVTAPTVLSAGAS-AWLGVEPGGAFSLGLRSNG 417
Query: 539 QVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
+++ G GQLG +T P + G + A G+ H V + ++ WG
Sbjct: 418 TLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNW--RTTATGTAHSVAVRADGTLWAWGD 475
Query: 598 GANGQLGHGDNENKQTP 614
++GQLG G TP
Sbjct: 476 NSSGQLGIGSTVAASTP 492
Score = 255 (94.8 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 88/330 (26%), Positives = 141/330 (42%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI--DALNGSNIHMVA 354
D +++ G + + G ++SWG G+LG G P + D L+ VA
Sbjct: 136 DWVAVSAGELTSFGLKGDGTLWSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVA 195
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
G H A+ G L+ WG + LG G + + P K+ + IS+ G
Sbjct: 196 AGGEHALALQADGTLWAWGANLTGQLGT-GGTGILPNPTPLKIGTDRDWTAISA---GEM 251
Query: 414 HTAAITSAGKLFTFGDGTFGALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
H+ A+ + G L+++G FG LG+G ++ + P V T + + A G HT A+
Sbjct: 252 HSVALKADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAA--GALHTVAL 309
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKVACGHS 529
NG S WG+ A+G +G G R P L V ++ +A G
Sbjct: 310 HR--------NGTVS----AWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTG 357
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVS 587
++ ++ A G VF G GQLG+ G+ G PT + ++ G++ + +
Sbjct: 358 VSFSVLANGTVFGWGGNGAGQLGN-GTFGAVTAPTVLSAGAS-AWLGVEPGGAFSLGL-R 414
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
S ++ WG A+GQLG G P V
Sbjct: 415 SNGTLWAWGGNASGQLGDGTTTPSAIPVPV 444
Score = 240 (89.5 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 85/320 (26%), Positives = 140/320 (43%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVAC 355
D +IA G+ H V + + G + +WG + G +G G A+ S P LI A + N +A
Sbjct: 295 DWVAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAA 354
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS-GQMEGLQISSICCGPWH 414
G + +V +G ++ WG + G LG + + P +S G L + G
Sbjct: 355 GTGVSFSVLANGTVFGWGG--NGAGQLGNGTFGAVTAPTVLSAGASAWLGVEP---GGAF 409
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
+ + S G L+ +G G LG G + +++P V+ G W T A
Sbjct: 410 SLGLRSNGTLWAWGGNASGQLGDGTTTPSAIP---------VPVVGGAGNWRTTATGTAH 460
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS----FCKVACGHSI 530
++G L+ WGD + GQLG G P + V++ S + VA G +
Sbjct: 461 SVAVRADGT----LWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAGGGAH 516
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE------GNIKHRYIEDIACGSYHIA 584
++ L A G ++S G +GQLG T T ++ GN ++ A G + +A
Sbjct: 517 SLGLKADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAAGGVFSLA 576
Query: 585 VVSSKSEVYTWGKGANGQLG 604
+ + ++TWG + QLG
Sbjct: 577 L-QADGTIWTWGDNSLLQLG 595
Score = 231 (86.4 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 83/327 (25%), Positives = 141/327 (43%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKL--IDALNGSNIHMVAC 355
+++A G+ H++ + G +++WG G+LG V ++ K I G++ V+
Sbjct: 83 KTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGNDWVAVSA 142
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP-RKVSGQMEGLQISSICCGPWH 414
GE + + G L++WG+ + G LG + +S P + V+ + + ++ G H
Sbjct: 143 GELTSFGLKGDGTLWSWGNNL--FGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEH 200
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
A+ + G L+ +G G LG G P ++ + S G H+ A+
Sbjct: 201 ALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVAL---- 256
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIA 533
K GS L++WG G+LG+G A P V +V + +A G T+A
Sbjct: 257 -KADGS-------LWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVAIAAGALHTVA 308
Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
L G V + G+ G +G + PT I + IA G+ V + V
Sbjct: 309 LHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTV 368
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEA 619
+ WG GQLG+G PT++ A
Sbjct: 369 FGWGGNGAGQLGNGTFGAVTAPTVLSA 395
Score = 228 (85.3 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 69/264 (26%), Positives = 127/264 (48%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN----GSNIHMVA 354
++ A G+ H+V V G +++WG+ S G+LG G S P+ I N G++ VA
Sbjct: 452 RTTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVA 511
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRK-VSGQMEGLQIS--SICC 410
G H+ + G L++WGD + G LG + S+ P + V+G + ++
Sbjct: 512 GGGAHSLGLKADGTLWSWGD--NTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWVAVAA 569
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAA 469
G + A+ + G ++T+GD + LG T + R V +L ++++
Sbjct: 570 GGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPA--QLAVASPPSTAFNSSW 627
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
+ AG+ G + + L+ WG + GQLG+G P+ V ++ + + +A G S
Sbjct: 628 VAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPYVSLAAGTS 687
Query: 530 ITIALTATGQVFSMGSADYGQLGS 553
++A + G +++ G+ GQLG+
Sbjct: 688 HSLAGRSDGTLWAWGNNTSGQLGT 711
Score = 211 (79.3 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 75/291 (25%), Positives = 133/291 (45%)
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRK-VSGQMEGLQ 404
G++ VA G H+ + G L++WGD + G LG + S+ P + V+G
Sbjct: 504 GNDWTAVAGGGAHSLGLKADGTLWSWGD--NTFGQLGDGTGTSNRTTPVQIVTGNPGNFD 561
Query: 405 IS--SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMAS 461
+ ++ G + A+ + G ++T+GD + LG T + R V +L
Sbjct: 562 RNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAMLTPATQRNVPA--QLAVASPP 619
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
++++ + AG+ G + + L+ WG + GQLG+G P+ V ++ + +
Sbjct: 620 STAFNSSWVAIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPY 679
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGS---PGSTGKF-------PTRIEGNIKHR 571
+A G S ++A + G +++ G+ GQLG+ PG P RI +
Sbjct: 680 VSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVS 739
Query: 572 YIED--IA-CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT-LVE 618
+D +A G H A + S ++TWG+ +GQLG+G PT L+E
Sbjct: 740 AADDWLVATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIPTALLE 790
Score = 168 (64.2 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 62/244 (25%), Positives = 104/244 (42%)
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ + G H + S G L+ G FG LG G + + P +V G
Sbjct: 34 VPHVAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVP------------GT 81
Query: 465 WHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLG----HGD-AEPRVVPLCVKVSDD 518
W T A AG T+ S G+ + L+ WG GQLG +G A + P+ + +D
Sbjct: 82 WKTVA----AG-TTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLATNKFSPIRIGTGND 136
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE---GNIKH-RYIE 574
+ V+ G + L G ++S G+ +G+LG G+T P ++ + + RY+
Sbjct: 137 --WVAVSAGELTSFGLKGDGTLWSWGNNLFGELGD-GTTVSRPQPVQVVADPLSNGRYVA 193
Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
+A G H + + ++ WG GQLG G PT ++ D+ ++ G
Sbjct: 194 -VAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMH 252
Query: 635 TAAI 638
+ A+
Sbjct: 253 SVAL 256
Score = 161 (61.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 45/159 (28%), Positives = 73/159 (45%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV--ACGE 357
+IA G H + + G +++WG S G+LG+GV P + +N + V A G
Sbjct: 629 AIAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTP--VQVINAEGVPYVSLAAGT 686
Query: 358 FHTCAVTLSGDLYTWGDGIHN-LGL---LGQVSEIS---HWIPRKV--SGQMEGLQISSI 408
H+ A G L+ WG+ LG G ++ H +P ++ S + +
Sbjct: 687 SHSLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSNPVSAADDWLV 746
Query: 409 C-CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
G H+AA+ S G L+T+G T G LG+G + +P
Sbjct: 747 ATAGGSHSAALKSNGTLWTWGQNTSGQLGNGTTTEADIP 785
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 280 (103.6 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 91/323 (28%), Positives = 137/323 (42%)
Query: 337 SYPKLIDAL-NGSNIHMVACGEFHTCAVTLSGDLYTW-----GDGIHNLGLLGQVSEISH 390
S P+ +DA+ +G + V G H VT+ +LYTW G +H G LG S+
Sbjct: 367 STPQKLDAIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLH--GQLGHGDRASY 424
Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV--PRE 448
P+ V +++G I + CG T IT G+L+ FG +G +G + V P +
Sbjct: 425 RQPKHVE-KLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLEPLQ 483
Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
++ SCG H A + +++++TWG G G+LG E
Sbjct: 484 LDFFLTNPVEQVSCGDNHVAVLTR------------NREVYTWGCGEYGRLGLDSEEDHY 531
Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG---------K 559
P V V ++ V CG T LT TG+V + G ++ +LG T +
Sbjct: 532 TPQKVDVPKTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCE 591
Query: 560 FP----TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
P + + I I+ G H A + + + T+G GQLG GD +
Sbjct: 592 VPYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGIN 651
Query: 616 LVEA-LRDKQVKSVVCGSNFTAA 637
L+ L KQV V CG FT A
Sbjct: 652 LLAGPLGGKQVIRVSCGDEFTIA 674
Score = 278 (102.9 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 88/326 (26%), Positives = 146/326 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--HGVE 333
+ DR PK +E + ++CG V +T +GQ++++G G +G
Sbjct: 416 LGHGDRASYRQPKHVEKLQGKAIRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYG 475
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
++V P +D + + V+CG+ H +T + ++YTWG G + G LG SE H+ P
Sbjct: 476 SEVLEPLQLDFFLTNPVEQVSCGDNHVAVLTRNREVYTWGCGEY--GRLGLDSEEDHYTP 533
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+KV + L I S+ CG T +T GK+ G F LG +S + +
Sbjct: 534 QKVDVP-KTLNIVSVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEV 592
Query: 454 ELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPL 511
T + I ++ GKT ++ +L T+G GQLG GD + + + L
Sbjct: 593 PYATSLTLAKQLSFYKIRTISPGKTHTASIDERGRLLTFGSNKCGQLGVGDYKKHLGINL 652
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKFPTR 563
+V+CG TIA T +F+ G+ G+L +P GS +P
Sbjct: 653 LAGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERAHGSDICTSWPRP 712
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSK 589
I G++ H + D++C +H +V K
Sbjct: 713 IFGSLHH--VPDLSCRGWHTIIVVEK 736
Score = 277 (102.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
Identities = 81/319 (25%), Positives = 141/319 (44%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG A PK ++ L G I
Sbjct: 381 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQ 440
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHN-LGL-LGQVSEISHWIPRKVSGQMEGLQISSICC 410
V+CG+ T +T G LY +G + +G+ SE+ P ++ + + + C
Sbjct: 441 VSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGSEVLE--PLQLDFFLTN-PVEQVSC 497
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H A +T +++T+G G +G LG P++V+ K L V CG T +
Sbjct: 498 GDNHVAVLTRNREVYTWGCGEYGRLGLDSEEDHYTPQKVDVPKTLNIVSVHCGCDGTFLL 557
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--- 526
+ GK GL+ G + H D V + ++ +SF K+
Sbjct: 558 TQT-GKVLAC-GLNEFNKLGLNQCTSGIINH-DTYCEVPYATSLTLAKQLSFYKIRTISP 614
Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP--TRIEGNIKHRYIEDIACGSYHIA 584
G + T ++ G++ + GS GQLG G K + G + + + ++CG
Sbjct: 615 GKTHTASIDERGRLLTFGSNKCGQLGV-GDYKKHLGINLLAGPLGGKQVIRVSCGDEFTI 673
Query: 585 VVSSKSEVYTWGKGANGQL 603
+ + ++ WG G NG+L
Sbjct: 674 AATDDNHIFAWGNGGNGRL 692
Score = 167 (63.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 49/171 (28%), Positives = 78/171 (45%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +DA+ +G + V G H VT+
Sbjct: 350 AVVTSRTSEVYVWG---GGK---------STPQKLDAIKSGCSARQVCAGNTHFAVVTVE 397
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG S+ P+ V +++G I + CG T IT
Sbjct: 398 KELYTWVNMQGGTKLH--GQLGHGDRASYRQPKHVE-KLQGKAIRQVSCGDDFTVCITDE 454
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAI 470
G+L+ FG +G +G + V P +++ SCG H A +
Sbjct: 455 GQLYAFGSDYYGCIGIDKAYGSEVLEPLQLDFFLTNPVEQVSCGDNHVAVL 505
Score = 141 (54.7 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 33/85 (38%), Positives = 46/85 (54%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K ++ V C
Sbjct: 384 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDRASYRQPKHVEKLQGKAIRQVSC 443
Query: 631 GSNFTAAICLHKGVSIADHSICSGC 655
G +FT I +G A S GC
Sbjct: 444 GDDFTVCIT-DEGQLYAFGSDYYGC 467
Score = 39 (18.8 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 150 HVSSISSDLTNKDSG 164
H SISSD ++ SG
Sbjct: 28 HCDSISSDFGSESSG 42
Score = 38 (18.4 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 41 FRLSSDEKLLIWYAGKEEKQLKLSHVSR 68
+R + D+ L++W KE +LS R
Sbjct: 79 YRRTEDDSLVVW---KEVDLTRLSEKER 103
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 274 (101.5 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 75/315 (23%), Positives = 137/315 (43%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G I
Sbjct: 371 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ 430
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +V+ P +++ + + + CG
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNN-PVEQVSCGD 489
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P++V+ K L V CG T + +
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHS 529
+GK GL+ G + H ++ +SF K+ A G +
Sbjct: 550 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKT 607
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSS 588
T A+ G++ + G GQLG + + G + + + ++CG +
Sbjct: 608 HTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667
Query: 589 KSEVYTWGKGANGQL 603
+ ++ WG G NG+L
Sbjct: 668 DNHIFAWGNGGNGRL 682
Score = 271 (100.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 95/352 (26%), Positives = 151/352 (42%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 388 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDE 444
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G + V P ++ SCG H +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTR------- 497
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 540 VFSMGSADYGQLG-SPGSTG--------KFPTRIEGNIKHR---Y-IEDIACGSYHIAVV 586
V + G ++ +LG + +G + P + + Y I IA G H A +
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 247 (92.0 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 86/326 (26%), Positives = 145/326 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA- 334
+ D+ PK +E + ++CG V VT +GQ++++G G +G A
Sbjct: 406 LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 465
Query: 335 -DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+V P ++ + + V+CG+ H +T + ++Y+WG G + G LG SE ++ P
Sbjct: 466 PEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTP 523
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+KV + L I ++ CG T +T +GK+ G F LG S + E
Sbjct: 524 QKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEI 582
Query: 454 ELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPL 511
T I +A GKT + +L T+G GQLG G+ + R+ + L
Sbjct: 583 PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINL 642
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKFPTR 563
+V+CG TIA T +F+ G+ G+L +P GS +P
Sbjct: 643 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP 702
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSK 589
I G++ H + D++C +H ++ K
Sbjct: 703 IFGSLHH--VPDLSCRGWHTILIVEK 726
Score = 160 (61.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 72/281 (25%), Positives = 121/281 (43%)
Query: 384 QVSEISHW-----IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD---GT--FG 433
+ SE+ W P+K+ G +C G H A +T +L+T+ + GT G
Sbjct: 345 RTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHG 404
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD++S P+ VE L+ SCG T + + G +L+ +G
Sbjct: 405 QLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD--------EG----QLYAFGS 452
Query: 494 GAEGQLGHGD-AEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
G +G A P V+ P+ + + +V+CG + + LT +V+S G +YG+L
Sbjct: 453 DYYGCMGVDKVAGPEVLEPMQLNFFLNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRL 512
Query: 552 GSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK------GAN---- 600
G + P +++ K I + CG +++ +V G G N
Sbjct: 513 GLDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMS 571
Query: 601 GQLGH-GDNENKQTP--TLVEALRDKQVKSVVCGSNFTAAI 638
G + H +E T TL + L +++++ G TAAI
Sbjct: 572 GIINHEAYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Score = 140 (54.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K ++ V C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 631 GSNFTAAICLHKGVSIADHSICSGC 655
G +FT + +G A S GC
Sbjct: 434 GDDFTVCVT-DEGQLYAFGSDYYGC 457
Score = 41 (19.5 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 41 FRLSSDEKLLIWYAGKEEKQLKLSHVSR 68
+R + D+ L++W KE ++LS R
Sbjct: 69 YRRTEDDSLVVW---KEVDLIRLSEKER 93
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 277 (102.6 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 76/315 (24%), Positives = 136/315 (43%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G I
Sbjct: 388 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ 447
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +V+ P ++ + + + CG
Sbjct: 448 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSN-PVEQVSCGD 506
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P++V+ K L V CG T + +
Sbjct: 507 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 566
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHS 529
+GK GL+ G + H ++ +SF K+ A G +
Sbjct: 567 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKT 624
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSS 588
T AL G++ + G GQLG + + G + + + ++CG +
Sbjct: 625 HTAALDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 684
Query: 589 KSEVYTWGKGANGQL 603
+ ++ WG G NG+L
Sbjct: 685 DNHIFAWGNGGNGRL 699
Score = 271 (100.5 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 95/352 (26%), Positives = 152/352 (43%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 357 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 404
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 405 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDE 461
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G + V P +++ SCG H +
Sbjct: 462 GQLYAFGSDYYGCMGVDKVAGAEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTR------- 514
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 515 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 569
Query: 540 VFSMGSADYGQLG-SPGSTG--------KFPTRIEGNIKHR---Y-IEDIACGSYHIAVV 586
V + G ++ +LG + +G + P + + Y I IA G H A +
Sbjct: 570 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAL 629
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 630 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 681
Score = 249 (92.7 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 87/327 (26%), Positives = 147/327 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VE 333
+ D+ PK +E + ++CG V VT +GQ++++G G +G
Sbjct: 423 LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 482
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
A+V P +D + + V+CG+ H +T + ++Y+WG G + G LG SE ++ P
Sbjct: 483 AEVLEPMQLDFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTP 540
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+KV + L I ++ CG T +T +GK+ G F LG S + E
Sbjct: 541 QKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 599
Query: 454 ELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VP 510
T I +A GKT + L + +L T+G GQLG G+ + R+ +
Sbjct: 600 PYTTSFTLAKQLSFYKIRTIAPGKTHTA-ALDERGRLLTFGCNKCGQLGVGNYKKRLGIN 658
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKFPT 562
L +V+CG TIA T +F+ G+ G+L +P GS +P
Sbjct: 659 LLGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPR 718
Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSK 589
I G++ H + D++C ++ ++ K
Sbjct: 719 PIFGSLHH--VPDLSCRGWNTILIVEK 743
Score = 150 (57.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 70/280 (25%), Positives = 119/280 (42%)
Query: 384 QVSEISHW-----IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD---GT--FG 433
+ SE+ W P+K+ G +C G H A +T +L+T+ + GT G
Sbjct: 362 RTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHG 421
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS-GSNGLSSKKLFTWG 492
LGHGD++S P+ VE L+ SCG T + + + GS+
Sbjct: 422 QLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCM------ 475
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
G + G EP + L +S+ + +V+CG + + LT +V+S G +YG+LG
Sbjct: 476 -GVDKVAGAEVLEP--MQLDFFLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYGRLG 530
Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK------GAN----G 601
+ P +++ K I + CG +++ +V G G N G
Sbjct: 531 LDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSG 589
Query: 602 QLGH-GDNENKQTP--TLVEALRDKQVKSVVCGSNFTAAI 638
+ H +E T TL + L +++++ G TAA+
Sbjct: 590 IINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAL 629
Score = 140 (54.3 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K ++ V C
Sbjct: 391 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 450
Query: 631 GSNFTAAICLHKGVSIADHSICSGC 655
G +FT + +G A S GC
Sbjct: 451 GDDFTVCVT-DEGQLYAFGSDYYGC 474
Score = 38 (18.4 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 41 FRLSSDEKLLIWYAGKEEKQLKLSHVSR 68
+R + D+ L++W KE +LS R
Sbjct: 85 YRRTEDDSLVVW---KEVDLTRLSEKER 109
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 274 (101.5 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 75/315 (23%), Positives = 137/315 (43%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G I
Sbjct: 371 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ 430
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +V+ P +++ + + + CG
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSN-PVEQVSCGD 489
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P++V+ K L V CG T + +
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHS 529
+GK GL+ G + H ++ +SF K+ A G +
Sbjct: 550 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKT 607
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSS 588
T A+ G++ + G GQLG + + G + + + ++CG +
Sbjct: 608 HTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 667
Query: 589 KSEVYTWGKGANGQL 603
+ ++ WG G NG+L
Sbjct: 668 DNHIFAWGNGGNGRL 682
Score = 270 (100.1 bits), Expect = 3.6e-18, Sum P(2) = 3.6e-18
Identities = 95/352 (26%), Positives = 151/352 (42%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 388 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDE 444
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G + V P ++ SCG H +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 497
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 540 VFSMGSADYGQLG-SPGSTG--------KFPTRIEGNIKHR---Y-IEDIACGSYHIAVV 586
V + G ++ +LG + +G + P + + Y I IA G H A +
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 613 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 248 (92.4 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 86/326 (26%), Positives = 145/326 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA- 334
+ D+ PK +E + ++CG V VT +GQ++++G G +G A
Sbjct: 406 LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 465
Query: 335 -DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+V P ++ + + V+CG+ H +T + ++Y+WG G + G LG SE ++ P
Sbjct: 466 PEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTP 523
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+KV + L I ++ CG T +T +GK+ G F LG S + E
Sbjct: 524 QKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 454 ELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPL 511
T I +A GKT + +L T+G GQLG G+ + R+ + L
Sbjct: 583 PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINL 642
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKFPTR 563
+V+CG TIA T +F+ G+ G+L +P GS +P
Sbjct: 643 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP 702
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSK 589
I G++ H + D++C +H ++ K
Sbjct: 703 IFGSLHH--VPDLSCRGWHTILIVEK 726
Score = 161 (61.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 73/283 (25%), Positives = 124/283 (43%)
Query: 384 QVSEISHW-----IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD---GT--FG 433
+ SE+ W P+K+ G +C G H A +T +L+T+ + GT G
Sbjct: 345 RTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHG 404
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD++S P+ VE L+ SCG T + + G +L+ +G
Sbjct: 405 QLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD--------EG----QLYAFGS 452
Query: 494 GAEGQLGHGD-AEPRVV-PLCVK--VSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
G +G A P V+ P+ + +S+ + +V+CG + + LT +V+S G +YG
Sbjct: 453 DYYGCMGVDKVAGPEVLEPMQLNFFLSNPVE--QVSCGDNHVVVLTRNKEVYSWGCGEYG 510
Query: 550 QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK------GAN-- 600
+LG + P +++ K I + CG +++ +V G G N
Sbjct: 511 RLGLDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQC 569
Query: 601 --GQLGH-GDNENKQTP--TLVEALRDKQVKSVVCGSNFTAAI 638
G + H +E T TL + L +++++ G TAAI
Sbjct: 570 MSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAI 612
Score = 140 (54.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 32/85 (37%), Positives = 46/85 (54%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K ++ V C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 631 GSNFTAAICLHKGVSIADHSICSGC 655
G +FT + +G A S GC
Sbjct: 434 GDDFTVCVT-DEGQLYAFGSDYYGC 457
Score = 38 (18.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 41 FRLSSDEKLLIWYAGKEEKQLKLSHVSR 68
+R + D+ L++W KE +LS R
Sbjct: 69 YRRTEDDSLVVW---KEVDLTRLSEKER 93
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 273 (101.2 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 76/315 (24%), Positives = 136/315 (43%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G I
Sbjct: 390 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ 449
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +V+ P +++ + + CG
Sbjct: 450 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNF-FSNNPVEQVSCGD 508
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P++V+ K L V CG T + +
Sbjct: 509 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 568
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHS 529
+GK GL+ G + H ++ +SF K VA G +
Sbjct: 569 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKT 626
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSS 588
T A+ G++ + G GQLG + + G + + + ++CG +
Sbjct: 627 HTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATD 686
Query: 589 KSEVYTWGKGANGQL 603
+ ++ WG G NG+L
Sbjct: 687 DNHIFAWGNGGNGRL 701
Score = 271 (100.5 bits), Expect = 3.0e-18, Sum P(2) = 3.0e-18
Identities = 94/352 (26%), Positives = 151/352 (42%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 359 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 406
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 407 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDE 463
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G + V P ++ SCG H +
Sbjct: 464 GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTR------- 516
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 517 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 571
Query: 540 VFSMGSADYGQLG-SPGSTG--------KFPTRIEGNIKHR---Y-IEDIACGSYHIAVV 586
V + G ++ +LG + +G + P + + Y I +A G H A +
Sbjct: 572 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAI 631
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 632 DERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 683
Score = 253 (94.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 87/326 (26%), Positives = 146/326 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA- 334
+ D+ PK +E + ++CG V VT +GQ++++G G +G A
Sbjct: 425 LGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAG 484
Query: 335 -DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+V P ++ + + + V+CG+ H +T + ++Y+WG G + G LG SE ++ P
Sbjct: 485 PEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEY--GRLGLDSEEDYYTP 542
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+KV + L I ++ CG T +T +GK+ G F LG S + E
Sbjct: 543 QKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEV 601
Query: 454 ELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPL 511
T I VA GKT + +L T+G GQLG G+ + R+ + L
Sbjct: 602 PYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINL 661
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SP-----GST--GKFPTR 563
+V+CG TIA T +F+ G+ G+L +P GS +P
Sbjct: 662 LGGPLGGKQVIRVSCGDEFTIAATDDNHIFAWGNGGNGRLAMTPTERPHGSDICTSWPRP 721
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSK 589
I G++ H + D++C +H ++ K
Sbjct: 722 IFGSLHH--VPDLSCRGWHTILIVEK 745
Score = 165 (63.1 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 73/281 (25%), Positives = 121/281 (43%)
Query: 384 QVSEISHW-----IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD---GT--FG 433
+ SE+ W P+K+ G +C G H A +T +L+T+ + GT G
Sbjct: 364 RTSEVYVWGGGKSTPQKLDVIKSGCSARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHG 423
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LGHGD++S P+ VE L+ SCG T + + G +L+ +G
Sbjct: 424 QLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD--------EG----QLYAFGS 471
Query: 494 GAEGQLGHGD-AEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
G +G A P V+ P+ + + +V+CG + + LT +V+S G +YG+L
Sbjct: 472 DYYGCMGVDKVAGPEVLEPMQLNFFSNNPVEQVSCGDNHVVVLTRNKEVYSWGCGEYGRL 531
Query: 552 GSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK------GAN---- 600
G + P +++ K I + CG +++ +V G G N
Sbjct: 532 GLDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNEFNKLGLNQCMS 590
Query: 601 GQLGH-GDNENKQTP--TLVEALRDKQVKSVVCGSNFTAAI 638
G + H +E T TL + L ++++V G TAAI
Sbjct: 591 GIINHEAYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAI 631
Score = 141 (54.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 43/132 (32%), Positives = 60/132 (45%)
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
S T+ T V S S Y G + K I+ R + G+ H AVV+
Sbjct: 350 SSTVTETPIAVVTSRTSEVYVWGGGKSTPQKLDV-IKSGCSAR---QVCAGNTHFAVVTV 405
Query: 589 KSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
+ E+YTW G +GQLGHGD + + P VE L+ K ++ V CG +FT + +G
Sbjct: 406 EKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVT-DEG 464
Query: 644 VSIADHSICSGC 655
A S GC
Sbjct: 465 QLYAFGSDYYGC 476
Score = 38 (18.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 41 FRLSSDEKLLIWYAGKEEKQLKLSHVSR 68
+R + D+ L++W KE +LS R
Sbjct: 88 YRRTEDDSLVVW---KEVDLTRLSEKER 112
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 159 (61.0 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASC 462
++++ CG HTAA+T G+L T+G G +G LGHGDR+S PR VE L + L+ C
Sbjct: 118 VAAVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVC 177
Query: 463 GVWHTAAIVEVAGKTSGSNGLSS 485
G W+T V G+ S+ S+
Sbjct: 178 GPWNTYVCVLQQGEARDSHAPST 200
Score = 135 (52.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/81 (39%), Positives = 45/81 (55%)
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
++P L+D + V+CG HT A+T G+L TWG G + G LG S PR+V
Sbjct: 105 AFPALLDLPLEPAVAAVSCGSRHTAALTRGGELNTWGWGKY--GQLGHGDRASCDHPRRV 162
Query: 397 SGQM--EGLQISSICCGPWHT 415
Q+ EGL+ + CGPW+T
Sbjct: 163 E-QLWAEGLRAQEVVCGPWNT 182
Score = 132 (51.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 29/84 (34%), Positives = 45/84 (53%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
ALL LE V +++CGS+H +T+ G++ +WG G G+LGHG A +P+ ++
Sbjct: 108 ALLDLPLEPAVA----AVSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVE 163
Query: 344 AL--NGSNIHMVACGEFHTCAVTL 365
L G V CG ++T L
Sbjct: 164 QLWAEGLRAQEVVCGPWNTYVCVL 187
Score = 127 (49.8 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL--RDKQVKSVVCGSN 633
++CGS H A ++ E+ TWG G GQLGHGD + P VE L + + VVCG
Sbjct: 121 VSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVCGPW 180
Query: 634 FTAAICLHKGVSIADHS 650
T L +G + H+
Sbjct: 181 NTYVCVLQQGEARDSHA 197
Score = 113 (44.8 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G+LGHG P+L++AL G + VA G +H+ V+ GDLY WG
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWG 58
Score = 90 (36.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
H G LG S S PR V + G+ + ++ G WH+A ++ G L+ +G G LG
Sbjct: 8 HRHGQLGHGSLESEQQPRLVEA-LGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Query: 437 HGDRSSTSVPREVETL 452
R+ E E +
Sbjct: 67 LPSRAVAEEQAEDEDM 82
Score = 82 (33.9 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 24/68 (35%), Positives = 30/68 (44%)
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
G LGHG S PR VE L + + G WH+A + S+G L+ WG
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACV---------SDG---GDLYVWG 58
Query: 493 DGAEGQLG 500
GQLG
Sbjct: 59 WNESGQLG 66
Score = 75 (31.5 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
GQLGHG E P V+ + VA G + ++ G ++ G + GQLG P
Sbjct: 11 GQLGHGSLESEQQPRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGLP 68
Score = 74 (31.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 24/63 (38%), Positives = 29/63 (46%)
Query: 441 SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
S + P ++ E SCG HTAA+ T G +L TWG G GQLG
Sbjct: 102 SIQAFPALLDLPLEPAVAAVSCGSRHTAAL------TRGG------ELNTWGWGKYGQLG 149
Query: 501 HGD 503
HGD
Sbjct: 150 HGD 152
Score = 73 (30.8 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGN-IKHRYIEDIACGSY 581
V+CG T ALT G++ + G YGQLG ++ P R+E + +++ CG +
Sbjct: 121 VSCGSRHTAALTRGGELNTWGWGKYGQLGHGDRASCDHPRRVEQLWAEGLRAQEVVCGPW 180
Query: 582 HIAV 585
+ V
Sbjct: 181 NTYV 184
Score = 71 (30.1 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG 329
P+++E+ + +++A G H+ V+ G ++ WG G+LG
Sbjct: 24 PRLVEALGGVPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLG 66
Score = 47 (21.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 614 PTLVEALRDKQVKSVVCGSNFTAAI 638
P L++ + V +V CGS TAA+
Sbjct: 107 PALLDLPLEPAVAAVSCGSRHTAAL 131
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 257 (95.5 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 93/348 (26%), Positives = 156/348 (44%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVA 354
DA I+ G H +++TK G I+S+G G LG D S P LID L G + ++
Sbjct: 75 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKAL-CIS 132
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
G+ H+ + G ++ WG + G +G + + P + MEG SI G H
Sbjct: 133 AGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDL---MEGTVCCSIASGADH 189
Query: 415 TAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPR--EVETLKELKTVMASCGVWHTAAIV 471
+T+AGK+FT G G LG +RS + R + + L+ + ++ A
Sbjct: 190 LVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITR------AKPF 243
Query: 472 EVAGKTSGSNGL-SSKKLFTWGDGAEG--QLGHGDA--EPRVVPLCVKVSDDISFCKVAC 526
E T+ + S+ W G QL H E + P+ ++ D +A
Sbjct: 244 EAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD---IRHIAG 300
Query: 527 GHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
G T+ LT + +G +YG+LG + PT ++ + + + + CG
Sbjct: 301 GQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVK-KLTEKIVS-VGCGEVCSY 358
Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
V+ ++Y+WG G N QLG GD +++ P +V + ++ Q K ++ S
Sbjct: 359 AVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVS-KNTQGKHMLLAS 405
Score = 154 (59.3 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 87/341 (25%), Positives = 151/341 (44%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVACGEFHTCAVTLSGDLY 370
T G + G G G+LG G D+ K + + G + ++ G H +T SGD+Y
Sbjct: 39 TVLGNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIY 96
Query: 371 TWGDGIHNLGLLGQ-VSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ SE S P + + L IS+ G H+A + G++F +G
Sbjct: 97 SFG--CNDEGALGRDTSEDGSESKPDLIDLPGKALCISA---GDSHSACLLEDGRVFAWG 151
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA---AIVEVAGK--TSGSNGL 483
+F HG+ T + T +L C + A I+ AGK T G
Sbjct: 152 --SFRD-SHGNMGLT-IDGNKRTPIDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQ 207
Query: 484 SSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV-ACGHSITIALTATGQVF 541
+L EG+ G D + P + ++ F + A + + + T ++
Sbjct: 208 GQLGRLSERSISGEGRRGKRDL---LRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIW 264
Query: 542 SMGSADYGQLGSPGSTGKFP-TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
+ G ++ QL +F T I+ +K I IA G +H ++++ + G+
Sbjct: 265 ATGLNNFKQLAHETKGKEFALTPIKTELKD--IRHIAGGQHHTVILTTDLKCSVVGRPEY 322
Query: 601 GQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
G+LG GD ++ + PT+V+ L +K V SV CG + A+ +
Sbjct: 323 GRLGLGDVKDVVEKPTIVKKLTEKIV-SVGCGEVCSYAVTI 362
Score = 144 (55.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 82/347 (23%), Positives = 139/347 (40%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGE--GSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
A I+ G H+ + + G++F+WG S G +G ++ + P ID + G+ +A
Sbjct: 128 ALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP--IDLMEGTVCCSIAS 185
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISSICCGP- 412
G H +T +G ++T G G LG++SE IS R + Q+ P
Sbjct: 186 GADHLVILTTAGKVFTVGCA--EQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPF 243
Query: 413 ---WHTAAITSAGK-----LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
W T T + ++ G F L H + ++T ELK + G
Sbjct: 244 EAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT--ELKDIRHIAGG 301
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCK 523
H I+ K S G G+LG GD + V P VK +
Sbjct: 302 QHHTVILTTDLKCS-----------VVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVS 349
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFP-TRIEGNIKHRYIEDIACGSY 581
V CG + A+T G+++S GS QLG G P + N + +++ + G
Sbjct: 350 VGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQ 409
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
H A+ K++ + ++ + +K+ T + DK+ ++V
Sbjct: 410 H-AIFLVKADKQDQKENVPVKVSGSSSISKKDKTPPQDNVDKEAENV 455
Score = 132 (51.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/133 (31%), Positives = 61/133 (45%)
Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIH 351
T + D + IA G H V++T + G G+LG G DV P ++ L I
Sbjct: 290 TELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLT-EKIV 348
Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
V CGE + AVT+ G LY+WG G++N LG+ E+ + VS +G +
Sbjct: 349 SVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVV--VSKNTQGKHMLLASG 406
Query: 411 GPWHTAAITSAGK 423
G H + A K
Sbjct: 407 GGQHAIFLVKADK 419
Score = 43 (20.2 bits), Expect = 2.9e-18, Sum P(2) = 2.9e-18
Identities = 18/84 (21%), Positives = 38/84 (45%)
Query: 706 KLNTTSESGSNSQIPR-NSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNG 764
K +T+S+ N P+ N+ +N + +KEN+ ++++T + A+ +
Sbjct: 467 KASTSSKK--NKTPPQDNADKEAENVDKQEQKENLPAKASTSSKKIKTPPQDDAAEEVEE 524
Query: 765 KFQWEPNSDFIKSNKISASPPGSR 788
+ EP K+ K +A G +
Sbjct: 525 ESAQEPTPK--KAKKPAAKRGGKK 546
Score = 41 (19.5 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 19/106 (17%), Positives = 45/106 (42%)
Query: 705 IKLNTTSESGSNSQIPR--NSSGLFQNCKRVTEKENMNSRSATDGQSK---PKGKSYHAS 759
+K++ +S + P N +N + +KEN+ ++++T + P+ + +
Sbjct: 428 VKVSGSSSISKKDKTPPQDNVDKEAENVDKQEQKENLPAKASTSSKKNKTPPQDNADKEA 487
Query: 760 PSLNGKFQWE--PNSDFIKSNKISASPPGSRRVSRAPSPISRKSSP 803
+++ + Q E P S KI +PP +++ +P
Sbjct: 488 ENVDKQEQKENLPAKASTSSKKIK-TPPQDDAAEEVEEESAQEPTP 532
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 252 (93.8 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 97/381 (25%), Positives = 164/381 (43%)
Query: 287 PKVLESTVVLDAQSIA--CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
P L V ++ + +A C S H V + +G+ ++WG G+LGHG P ++
Sbjct: 47 PTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSG 106
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ----M 400
L+ I A G HT V +S D + G G + G LG S + ++ +V +
Sbjct: 107 LSKHKIVKAAAGRNHT--VVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCV 164
Query: 401 EGLQISSICCGPWHTAAITSA--GKLFTFGDGTFGALGHG-----DRSSTSVPREVETLK 453
+++++ CG T ++S + T G +G LGHG + +SV E
Sbjct: 165 VSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQP 224
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK-LFTWGDGAEGQLGHGDAEPRVVPLC 512
K + + G IV+VA T+ + + ++TWG G G+LGH + + P
Sbjct: 225 RPKAIASLAG----ETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRR 280
Query: 513 VKV---SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK 569
+ V ++ + + S A TA G M +G++ + G +P + ++
Sbjct: 281 IDVFQRNNVLPPNAILSAGSANSACTAGGGQLYM----WGKIKNNGDDWMYPKPMM-DLS 335
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT--PTLVEALRDKQVKS 627
+ + GS H V + S +WG G+LG+G N K + P V+ L V
Sbjct: 336 GWNLRWMDSGSMH-HFVGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMG 394
Query: 628 VVCGSNFTAAICLHKGVSIAD 648
V CG F ++ + IAD
Sbjct: 395 VACG--FCHSMVIVDRTDIAD 413
Score = 227 (85.0 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 86/297 (28%), Positives = 129/297 (43%)
Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVA--CGEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
GK +E ++ P + L G NI VA C FH A+ + G YTWG + G LG
Sbjct: 34 GKRKGAMEGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGR--NEKGQLG 91
Query: 384 QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
I P VSG + +I G HT ++ G+ FG +G LG G +
Sbjct: 92 HGDMIQRDRPTVVSG-LSKHKIVKAAAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNG 150
Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG- 502
V EVE+ L V++ V + A + S + G S + T G GQLGHG
Sbjct: 151 FVSVEVESTP-LPCVVSD-EVTNVACGADFTVWLSSTEGAS---ILTAGLPQYGQLGHGT 205
Query: 503 ---------------DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
+A+PR + + I KVACG + T+A+ G V++ G
Sbjct: 206 DNEFNMKDSSVRLAYEAQPRPKAIASLAGETI--VKVACGTNHTVAVDKNGYVYTWGFGG 263
Query: 548 YGQLGSPGSTGKF-PTRIEGNIKHRYIED---IACGSYHIAVVSSKSEVYTWGKGAN 600
YG+LG ++ P RI+ ++ + ++ GS + A + ++Y WGK N
Sbjct: 264 YGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWGKIKN 320
Score = 159 (61.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 77/345 (22%), Positives = 134/345 (38%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHG------VEADVSYPKLIDALNGSNIHMVAC 355
A G H V+V+ GQ +G G+LG G V +V L + + VAC
Sbjct: 116 AAGRNHTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPL-PCVVSDEVTNVAC 174
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE-----------ISHWI-PR-KVSGQMEG 402
G T ++ + G+ G LG ++ +++ PR K + G
Sbjct: 175 GADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAG 234
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
I + CG HT A+ G ++T+G G +G LGH ++ PR ++ + + +
Sbjct: 235 ETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPN- 293
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
AI+ AG + + +L+ WG +GD P+ ++ +
Sbjct: 294 ------AILS-AGSANSACTAGGGQLYMWGKIKN----NGDDWMYPKPMMDLSGWNLRWM 342
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG-SPGS--TGKFPTRIEGNIKHRYIEDIACG 579
H + A S G A YG+LG P + P +++ ++ ++ +ACG
Sbjct: 343 DSGSMHHF---VGADSSCISWGHAQYGELGYGPNGQKSSAAPKKVD-MLEGMHVMGVACG 398
Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
H V+ ++++ + G G E E L KQ
Sbjct: 399 FCHSMVIVDRTDIADRLEQLEVYDGKGSLEESVEEVKEETLAPKQ 443
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 197 (74.4 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 83/309 (26%), Positives = 133/309 (43%)
Query: 317 IFSWGEGSGGKLG------HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
+ S+G+G+ G LG G+ D P ++ L S+I ++ G +H+ AVT SG+++
Sbjct: 46 VMSFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLP-SDISSISAGHYHSLAVTSSGEIW 104
Query: 371 TWGDGIHNLGLLGQV----SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
WG ++ G LG++ S S P++V G +E + + + +AAI G L+
Sbjct: 105 AWGR--NDEGQLGRIVIDSSRDSRSEPKRVEG-LENVNVQAAFASGVVSAAIGDDGSLWV 161
Query: 427 FGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
+G G LG G+ VP VE L V S G W A + V GK
Sbjct: 162 WGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLG-WGHALALTVDGK--------- 211
Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
+F WG A+G++G+ +PL + D I+ + GH L +
Sbjct: 212 --VFGWGYVADGRVGNVG-----LPLEASLLDSITDGSMK-GHHAAGDLNLEAAEKKVVE 263
Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
A + P + P +E + + DIACGS H ++ + + G GQLG
Sbjct: 264 AMSKENDMPIAWE--PCLVEETCNEK-VADIACGSDHSLILCHDGTLLSAGSNIYGQLGR 320
Query: 606 GDNENKQTP 614
+ P
Sbjct: 321 SKQDLGMKP 329
Score = 193 (73.0 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 91/315 (28%), Positives = 137/315 (43%)
Query: 351 HMVACGEFHTCAVTLSGDLYT---WGDGIHNLGLLGQVSE------ISHWIPRKVSGQME 401
H++ G + SG+ T +GDG NLG LG S + + P VS
Sbjct: 25 HVLFNGVVRRQFTSTSGERRTVMSFGDG--NLGALGLSSSSIPGMGMDAYEPTVVSNLPS 82
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH----GDRSSTSVPREVETLKELKT 457
ISSI G +H+ A+TS+G+++ +G G LG R S S P+ VE L+ +
Sbjct: 83 --DISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVEGLENVN- 139
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA--EPRVVPLCVKV 515
V A+ + +V A G +G L+ WG GQLG G+ E RV P V+
Sbjct: 140 VQAA----FASGVVSAA---IGDDG----SLWVWGRSKRGQLGLGNGIIEARV-PSRVEN 187
Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGS-AD--YGQLGSPGSTGKFPTRIEGNIKHRY 572
KV+ G +ALT G+VF G AD G +G P + +G++K +
Sbjct: 188 LAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLPLEASLLDSITDGSMKGHH 247
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
A G ++ + K V K D P LVE +++V + CGS
Sbjct: 248 ----AAGDLNLEA-AEKKVVEAMSK-------ENDMPIAWEPCLVEETCNEKVADIACGS 295
Query: 633 NFTAAICLHKGVSIA 647
+ + +C H G ++
Sbjct: 296 DHSLILC-HDGTLLS 309
Score = 159 (61.0 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 49/162 (30%), Positives = 74/162 (45%)
Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV---EADV-SY 338
DA P V+ S + D SI+ G H++ VT G+I++WG G+LG V D S
Sbjct: 70 DAYEPTVV-SNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSE 128
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVS 397
PK ++ L N+ + A+ G L+ WG LGL + E +P +V
Sbjct: 129 PKRVEGLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEAR--VPSRVE 186
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGTFGALG 436
+ + + G H A+T GK+F +G DG G +G
Sbjct: 187 N-LAAEHVVKVSLGWGHALALTVDGKVFGWGYVADGRVGNVG 227
Score = 152 (58.6 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P ++E T IACGS H++++ G + S G G+LG + D+ K +D +
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQ-DLGM-KPVD-IT 333
Query: 347 GSNIHMVACGEFHTCAVTLSGD--LYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
S I +A G H+ A+ G+ + +WG + LG G+ + PR+V G +G
Sbjct: 334 ESPIS-IAAGLGHSLAICNRGERNILSWGWNRSRQLGR-GKPENL----PREVEG-FDGE 386
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
+S+ G H+ +T G+ + +G G G LG G S P +E ++ + A G
Sbjct: 387 SPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGSSSDEPEPMLLEDVEGC-VLQAVAG 445
Query: 464 VWHTAAIV 471
H+ +V
Sbjct: 446 FDHSLILV 453
Score = 136 (52.9 bits), Expect = 2.2e-17, Sum P(2) = 2.2e-17
Identities = 39/131 (29%), Positives = 56/131 (42%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
L + G GQLG + + P+ + S IS GHS+ I + S G
Sbjct: 307 LLSAGSNIYGQLGRSKQDLGMKPVDITESP-ISIA-AGLGHSLAICNRGERNILSWGWNR 364
Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
QLG G P +EG ++ G H V+ K E + WG G NG+LG G
Sbjct: 365 SRQLGR-GKPENLPREVEG-FDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGRLGLGS 422
Query: 608 NENKQTPTLVE 618
+ ++ P L+E
Sbjct: 423 SSDEPEPMLLE 433
Score = 110 (43.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 43/139 (30%), Positives = 60/139 (43%)
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRI-EGN 567
P V+ + + +ACG ++ L G + S GS YGQLG S G P I E
Sbjct: 277 PCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQDLGMKPVDITESP 336
Query: 568 IKHRYIEDIACGSYHIAVVSSKSE--VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
I IA G H + ++ E + +WG + QLG G EN P VE +
Sbjct: 337 IS------IAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPEN--LPREVEGFDGESP 388
Query: 626 KSVVCGSNFTAAICL-HKG 643
SV G ++C+ KG
Sbjct: 389 ASVSAGR--VHSLCVTEKG 405
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 265 (98.3 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 86/285 (30%), Positives = 138/285 (48%)
Query: 281 RRDALLP-KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSY 338
+RD L+P ++LE + +SIACG+ H++ + GQ++SWG G+ G+LG G + V
Sbjct: 231 KRDVLIPTQILELSNKR-IKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPT 289
Query: 339 PKLIDALN--GSN--IHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHW-I 392
P LI +N GSN +A G ++ + +GD+Y++G +H LG +
Sbjct: 290 PTLISVINRFGSNEIATAIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQST 349
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P+K+ LQ+ SI C WH+ + G+++T G T G LG S +S E ++
Sbjct: 350 PKKIPSI---LQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSI 406
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLS-SKKLFTWGDGAEGQLGH----GDAEPR 507
KT + + I ++A T+ + LS S L++WG + QLG G +E
Sbjct: 407 TNSKT---NGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYY 463
Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
P V + + A G +AL+ G+VF G Q G
Sbjct: 464 SQPKLVTALNPYTIHSFAVGDQHVVALSDQGEVFCYGDNSTLQCG 508
Score = 243 (90.6 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 77/319 (24%), Positives = 151/319 (47%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
G + +++T G ++S G S GK GH + DV P I L+ I +ACG H+ A+
Sbjct: 202 GQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVLIPTQILELSNKRIKSIACGTHHSLAM 261
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISS-ICCGPWHTAAITSA 421
G +Y+WG+G LGL S + V + +I++ I G ++ + S
Sbjct: 262 DDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIATAIAAGCDNSMILGSN 321
Query: 422 GKLFTFGDGTFGALGH----GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK- 476
G +++FG LG+ G S P+++ ++ ++K++ +C WH+ +++ G+
Sbjct: 322 GDVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQMKSI--ACASWHSV-FLDLKGRV 378
Query: 477 -TSGS--NGLSSKKLFTWGDGAEGQLGHGDAEPR-VVPLCVKVSDDISFCKVACGHSITI 532
T GS NG + + ++ ++ +++ +P +++ ++ACG + T
Sbjct: 379 YTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLP-----QEEV-IKQIACGTNFTT 432
Query: 533 ALTATGQVFSMGSADYGQLGSPGSTG--KFPT--RIEGNIKHRYIEDIACGSYHIAVVSS 588
L+ +G ++S G QLG G ++ + ++ + I A G H+ +S
Sbjct: 433 VLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHSFAVGDQHVVALSD 492
Query: 589 KSEVYTWGKGANGQLGHGD 607
+ EV+ +G + Q G G+
Sbjct: 493 QGEVFCYGDNSTLQCGFGE 511
Score = 211 (79.3 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 88/371 (23%), Positives = 160/371 (43%)
Query: 290 LESTVVLDAQSIACGSKH---AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
L+ V++D ++I K +++ +Q I+ WG+ L A + D ++
Sbjct: 135 LDIAVMMDHKTIIKELKKLKTSMMTMEQTSIYQWGQILTSSLTLKSCAKATNMLFNDEIS 194
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
G+ + +T +G +Y+ G+ + G G + IP ++ ++ +I
Sbjct: 195 API--QTEFGQNYNLILTDTGAVYS--SGLCSYGKTGHKKKRDVLIPTQIL-ELSNKRIK 249
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
SI CG H+ A+ G+++++G+G G LG G+ S VP L +V+ G
Sbjct: 250 SIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSI-VPTPT-----LISVINRFGSNE 303
Query: 467 TAAIVEVAGKTS---GSNGLSSKKLFTWGDGAEGQLGHGDAEPRV--VPLCVKVSDDISF 521
A + S GSNG ++++G +LG+ + + + K+ +
Sbjct: 304 IATAIAAGCDNSMILGSNG----DVYSFGSNLHYKLGYKECDGALGFQSTPKKIPSILQM 359
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIE-------GNI-KHR 571
+AC ++ L G+V++ GS+ G+LG S+ +P R+ G + +
Sbjct: 360 KSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITNSKTNGTLPQEE 419
Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH----GDNENKQTPTLVEALRDKQVKS 627
I+ IACG+ V+S +Y+WG QLG G +E P LV AL + S
Sbjct: 420 VIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYSQPKLVTALNPYTIHS 479
Query: 628 VVCGSNFTAAI 638
G A+
Sbjct: 480 FAVGDQHVVAL 490
Score = 40 (19.1 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
+I I +YI C YHI+++ + + TW
Sbjct: 856 KIRSQIDIQYI----CYIYHISLIYNVKLLKTW 884
Score = 38 (18.4 bits), Expect = 3.1e-17, Sum P(3) = 3.1e-17
Identities = 7/12 (58%), Positives = 11/12 (91%)
Query: 147 SPSHVSSISSDL 158
+P HVSSIS+++
Sbjct: 100 TPLHVSSISNNI 111
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 242 (90.2 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 88/357 (24%), Positives = 155/357 (43%)
Query: 301 IACG--SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGE 357
+A G + H +L+ + +G G+LG + ++ P +I AL NI A G
Sbjct: 119 VASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGR 178
Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
HT +T +G +Y G+ +G + + + P ++ G I I CG +
Sbjct: 179 HHTLFLTDTGTVYACGENKSGQCGVGN-THANIYSPTPIN--YRGPPIIRIGCGAEFSVI 235
Query: 418 ITSAGKLFTFGDGTFGALGHG-DR----SSTSVPREVETL-KELKTVMASCGVWHTAAI- 470
+ G L TFG +G LGH D ++ + ET K++ + H +
Sbjct: 236 LDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVD 295
Query: 471 -VEVAGKTSGSN---GLSSKK-LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC--K 523
V++ G+N + SKK +++WG G G+LGH + + +VP +K D
Sbjct: 296 GVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRS 355
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
V CG + ++ + G +F +GQ G +P ++ ++ I DI C + I
Sbjct: 356 VFCGSTFSLIVNELGLLFL-----FGQNKKTGEANMYPKPVQ-DLSGWNITDIGCANTSI 409
Query: 584 AVVSSKSEVYTWGKGAN-GQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
++S+ + WG G+LG G+ + T P V L + ++ V G + T +
Sbjct: 410 -MISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLL 465
Score = 180 (68.4 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 53/176 (30%), Positives = 85/176 (48%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN--GSNIHMVACGEFH 359
ACG+ H V + + +++SWG G G+LGH D P+L+ + G V CG
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTF 362
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
+ V G L+ +G G+ ++ P+ V + G I+ I C +T+ +
Sbjct: 363 SLIVNELGLLFLFGQNKKT----GE----ANMYPKPVQ-DLSGWNITDIGCA--NTSIMI 411
Query: 420 SAGK-LFTFGDG-TFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
SA L +G TFG LG G+ + S++VP+EV L +K + G HT +V+
Sbjct: 412 SADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVD 467
Score = 125 (49.1 bits), Expect = 0.00026, P = 0.00026
Identities = 40/149 (26%), Positives = 77/149 (51%)
Query: 276 ISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
+ A+ +D ++P++++ T +S+ CGS +++V + G +F +G+ K G E
Sbjct: 329 LGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK--KTG---E 383
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD--LYTWGDGIHNLGLLGQVSEI--S 389
A++ YPK + L+G NI + C ++ +S D L WG G LG + E S
Sbjct: 384 ANM-YPKPVQDLSGWNITDIGCAN---TSIMISADDTLIAWGAS-PTFGELG-IGEFQKS 437
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
+P++V +++ ++I + G HT +
Sbjct: 438 STVPKEVP-KLDNIKIPQVTMGYSHTVLL 465
Score = 109 (43.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 278 SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADV 336
S D + A P ++ + L+ A G H + +T G +++ GE G+ G G A++
Sbjct: 151 SQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANI 210
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-PRK 395
P I+ G I + CG + + + G L+T+G + G LG ++ +++ K
Sbjct: 211 YSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTFG--LPEYGQLGHNTDAKYFVNANK 267
Query: 396 VSGQME 401
+S E
Sbjct: 268 LSFHFE 273
Score = 59 (25.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 488 LFTWGDGAE-GQLGHGDAEPR-VVPLCVKVSDDISFCKVACGHSITIALTAT 537
L WG G+LG G+ + VP V D+I +V G+S T+ L T
Sbjct: 417 LIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDT 468
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 240 (89.5 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 63/197 (31%), Positives = 106/197 (53%)
Query: 288 KVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV----EADVSYPKL 341
KVL+ T + D + I GS H +L+ G ++SWG G G LGHGV + ++ PK
Sbjct: 235 KVLKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKK 294
Query: 342 IDAL----NGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKV 396
I N S I +ACG +H+ +T ++YT+G G LG G+ ++H+IP+++
Sbjct: 295 ITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGH-GENDTLNHYIPKRI 353
Query: 397 SGQME---GLQISSICCGPW-HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
+ G +I SI G ++ IT+ G ++++G G+LGHG + P+++++L
Sbjct: 354 KSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSL 413
Query: 453 KELKTVMASCGVWHTAA 469
+K + + G HT A
Sbjct: 414 SNIKKITS--GFKHTLA 428
Score = 179 (68.1 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 53/206 (25%), Positives = 96/206 (46%)
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHN-LGL-LGQVSEISHWIPRKVSG---QMEGLQISS 407
+ G H + G LY+WG+G LG +G + + + P+K++ +I
Sbjct: 250 ICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVD 309
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS--VPREVETLKELKTVMASCGVW 465
I CG +H+ +T+ +++TFG G FG LGHG+ + + +P K +K+ +
Sbjct: 310 IACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIP------KRIKSTGDNAAGN 363
Query: 466 HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
+I AG + S +++ +++WG G LGHG E P ++ +I K+
Sbjct: 364 KIKSIF--AGDHANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKIQSLSNIK--KI 419
Query: 525 ACGHSITIALTATGQVFSMGSADYGQ 550
G T+A + ++ G +GQ
Sbjct: 420 TSGFKHTLAQSINNDIYVFGDNTFGQ 445
Score = 161 (61.7 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 69/253 (27%), Positives = 107/253 (42%)
Query: 513 VKVSDDI--SFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGK----FPTRIE 565
+K +D I F K+ G + L G ++S G+ +G LG GS K P +I
Sbjct: 237 LKETDPIFKDFKKICSGSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKIT 296
Query: 566 G---NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEAL 620
N I DIACG YH +++ +E+YT+G G GQLGHG+N+ N P +++
Sbjct: 297 TFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGHGENDTLNHYIPKRIKST 356
Query: 621 RDK----QVKSVVCGSNFTAAICLHKGVSIADHSICSGCXXXXXXXXXXHNCYNCGLVYC 676
D ++KS+ G + + G S+ G N Y+ +
Sbjct: 357 GDNAAGNKIKSIFAGDHANSFYITTDG-SVYSWGWNDG---GSLGHGTNENHYSPKKIQ- 411
Query: 677 KLCSSKK---SMKTALAPEINKP-YRVCDDCF----IKLNTTSESGSNSQIPRNSSGLFQ 728
L + KK K LA IN Y D+ F +K N S + ++ N++
Sbjct: 412 SLSNIKKITSGFKHTLAQSINNDIYVFGDNTFGQTALKFNYNSNNNNDKNNNNNNNN--- 468
Query: 729 NCKRVTEKENMNS 741
N +K N N+
Sbjct: 469 NNNNNNDKNNNNN 481
Score = 139 (54.0 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 35/100 (35%), Positives = 53/100 (53%)
Query: 280 DRRDALLPKVLESTVVLDA----QSIACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
D + +PK ++ST A +SI G ++ +T G ++SWG GG LGHG
Sbjct: 343 DTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSFYITTDGSVYSWGWNDGGSLGHGTNE 402
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
+ PK I +L SNI + G HT A +++ D+Y +GD
Sbjct: 403 NHYSPKKIQSL--SNIKKITSGFKHTLAQSINNDIYVFGD 440
Score = 120 (47.3 bits), Expect = 0.0010, P = 0.0010
Identities = 67/279 (24%), Positives = 117/279 (41%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A+ I + H+ ++ + + + WG L + +V P I N I V+
Sbjct: 72 LKAKDIFANAYHSGIINENDEFYHWG------LYSNLVTEV--PNKIKINNDKKISNVSL 123
Query: 356 G-EFHTCAVTLSGDLYTWGD---GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ--ISSIC 409
G F LY+ G G+ +G + ++ KV ++E I SI
Sbjct: 124 GGNFIILQTKDDNQLYSIGKSKYGVLGIGRSIDDDDDNNNNNEKVY-KIEKFNDNIISIV 182
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDR-----SSTSVPREVETL-KELKTVMASCG 463
G H+ +T ++ +G LG +R SS S P E E K +K + +
Sbjct: 183 SGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDP 242
Query: 464 VWHTAAIVEVAGKTSGSNGL--SSKKLFTWGDGAEGQLGHG----DAE----PRVVPLCV 513
++ + +G S N L + L++WG+G G LGHG D E P+ +
Sbjct: 243 IFKDFKKI-CSG--SDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFT 299
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
+++ +ACG ++ LT ++++ G ++GQLG
Sbjct: 300 LNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLG 338
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 236 (88.1 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 106/373 (28%), Positives = 168/373 (45%)
Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEA-DVSY-PKLIDALNGSNIHMV--ACGEFHTCAVTL 365
L T++ ++ +G GS +LG G E DV Y P+L L+ + +V A G H+ A++
Sbjct: 66 LPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSH 125
Query: 366 SGDLYTWG-DGIHNLGLL--GQVSE--------ISHWIPRKVSGQMEGLQISSICCGPWH 414
G +YTWG + + LG L Q E + P KV G + L+++ + C
Sbjct: 126 DGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNL 185
Query: 415 TAAITSAGKLFTFGDGTF----GALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAA 469
TAAIT G FT+G TF G LG+ D + T+ P ++ L E+ + G H A
Sbjct: 186 TAAITDNGCCFTWG--TFRCSDGVLGYSDSQKRTAEPTQMR-LPEI--CQLATGTDHIIA 240
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR----VVPLCVKVSDDISFCKVA 525
+ T+G K++TWG+G + QLG E R + P + + + IS V
Sbjct: 241 LT-----TTG-------KVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIIS---VG 285
Query: 526 CGHSITIALTATGQVFSMGSADYGQLG------SPGSTGKFPTRIEGNIKHRYIEDIACG 579
G + A+ G+V++ G Q G G+ PT ++ ++ ++ I G
Sbjct: 286 AGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDA-LEGYNVKSITGG 344
Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDN--------ENK------QTPTLVEALRDKQV 625
+H + V WG+ QLG DN + K TPT++ L + V
Sbjct: 345 EHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN--V 402
Query: 626 KSVVCGSNFTAAI 638
VVCG++ A+
Sbjct: 403 IQVVCGTHHNLAV 415
Score = 205 (77.2 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 84/311 (27%), Positives = 137/311 (44%)
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
K+ AL+ + V C + T A+T +G +TWG + G+LG S+ Q
Sbjct: 166 KVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGY-SDSQKRTAEPT--Q 222
Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
M +I + G H A+T+ GK++T+G+G LG + LK ++
Sbjct: 223 MRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNII 282
Query: 460 A-SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCVKVS 516
+ G +H+ AI + G+ GL+ T G E + + E V+ P V
Sbjct: 283 SVGAGSYHSFAI-DNKGRVYAW-GLN----ITRQCGIEVE---DEEEGAVITKPTLVDAL 333
Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK-HRY--- 572
+ + + G T+AL G+V + G D QLG P + P + + K + Y
Sbjct: 334 EGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNA--LPETVVKDEKGNNYYLS 391
Query: 573 ----------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALR 621
+ + CG++H V+S +VY+WG N ++G GDN E+ PTLV +
Sbjct: 392 TPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKA 451
Query: 622 DKQVKSVVCGS 632
K+V V G+
Sbjct: 452 IKEVAIRVAGA 462
Score = 193 (73.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 61/226 (26%), Positives = 104/226 (46%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-----AD 335
R L P+ L ++ S+ GS H+ + +G++++WG + G VE A
Sbjct: 267 RLQGLTPQPLALKNII---SVGAGSYHSFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAV 323
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
++ P L+DAL G N+ + GE HT A+ G + WG D H LG+ + + +
Sbjct: 324 ITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNA--LPETVVK 381
Query: 395 KVSGQ---------MEGL-QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS-T 443
G + GL + + CG H A+TS GK++++G +G GD
Sbjct: 382 DEKGNNYYLSTPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWGSAENYEVGQGDNDEDV 441
Query: 444 SVPREVET--LKELKTVMASCG-VWHTAAIVEVAGKTSGSNGLSSK 486
+VP V + +KE+ +A G + A + A + +NG+ S+
Sbjct: 442 AVPTLVRSKAIKEVAIRVAGAGGQFSIIAGIPNASEEPVANGIKSE 487
Score = 173 (66.0 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 60/220 (27%), Positives = 93/220 (42%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI-DALNGSNIHMVACGEFH 359
+A G+ H + +T G++++WG G +LG + L L NI V G +H
Sbjct: 231 LATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYH 290
Query: 360 TCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWIPRK-VSGQMEGLQISSICCGPWHTAA 417
+ A+ G +Y WG I G+ + E I + + +EG + SI G HT A
Sbjct: 291 SFAIDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLA 350
Query: 418 ITSAGKLFTFGDGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+ G++ +G LG D + T V E L T G+ T I V G
Sbjct: 351 LLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGL--TNVIQVVCG 408
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVK 514
S K+++WG ++G GD + V VP V+
Sbjct: 409 THHNLAVTSDGKVYSWGSAENYEVGQGDNDEDVAVPTLVR 448
Score = 159 (61.0 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 70/283 (24%), Positives = 119/283 (42%)
Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG---GKL--------GHGVEADV--SY 338
ST + +A G H+ ++ G++++WG G+L G V+ D+
Sbjct: 104 STDKVGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGT 163
Query: 339 PKLID-ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
P ++ AL+ + V C + T A+T +G +TWG + G+LG S+
Sbjct: 164 PSKVEGALSHLRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVLGY-SDSQKRTAEPT- 221
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
QM +I + G H A+T+ GK++T+G+G LG + LK
Sbjct: 222 -QMRLPEICQLATGTDHIIALTTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKN 280
Query: 458 VMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG---HGDAEPRVV--PL 511
+++ G +H+ AI + G +++ WG Q G + E V+ P
Sbjct: 281 IISVGAGSYHSFAI--------DNKG----RVYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
V + + + G T+AL G+V + G D QLG P
Sbjct: 329 LVDALEGYNVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIP 371
>FB|FBgn0045980 [details] [associations]
symbol:niki "nimA-like kinase" species:7227 "Drosophila
melanogaster" [GO:0004702 "receptor signaling protein
serine/threonine kinase activity" evidence=ISS;NAS] [GO:0006468
"protein phosphorylation" evidence=IEA;NAS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004702 HSSP:O14965
PRINTS:PR00633 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 RefSeq:NP_651293.1 UniGene:Dm.27397
ProteinModelPortal:Q9VC32 SMR:Q9VC32 PRIDE:Q9VC32
EnsemblMetazoa:FBtr0084737 GeneID:42959 KEGG:dme:Dmel_CG10951
UCSC:CG10951-RA CTD:42959 FlyBase:FBgn0045980 InParanoid:Q9VC32
OMA:WRHYPTK OrthoDB:EOG4FJ6QP PhylomeDB:Q9VC32 GenomeRNAi:42959
NextBio:831528 ArrayExpress:Q9VC32 Bgee:Q9VC32 Uniprot:Q9VC32
Length = 841
Score = 238 (88.8 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 89/321 (27%), Positives = 154/321 (47%)
Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHM 352
V++D +A H V+V + G ++WGEG+ G+LG +EA YP ++++ N H+
Sbjct: 453 VIVD---VAMSDSHFVVVNEDGSAYAWGEGTHGQLGLTALEAWKHYPSRMESVR--NYHV 507
Query: 353 V-AC-GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
V AC G+ T VT +G L + G H L L GQ + ++ P+ ++ ++ +++ +
Sbjct: 508 VSACAGDGFTILVTQAGSLLSCGSNAH-LAL-GQDEQRNYHSPKLIA-RLADVRVEQVAA 564
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMAS--CGVWHT 467
G H A++ G ++ +G T GALG G+ + P+++ L +KT + CG T
Sbjct: 565 GLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKFPQKI-LLSHVKTKPSKIYCGP-DT 622
Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
+A++ +NG +L G +LG + V++ ++ +
Sbjct: 623 SAVLF-------ANG----ELHVCGSNDYNKLGFQRSAKITAFKKVQLPHKVTQACFSST 671
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVV 586
HS+ L G V++MG GQ G PT ++ ++K RYI C S +V
Sbjct: 672 HSVF--LVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVD-SVKSRYIVKANC-SDQCTIV 727
Query: 587 SSKSEVYT-WGKGANGQLGHG 606
+S+ + T WG NG G G
Sbjct: 728 ASEDNIITVWGT-RNGLPGIG 747
Score = 237 (88.5 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 75/289 (25%), Positives = 124/289 (42%)
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSIC 409
VA + H V G Y WG+G H G LG ++ + W + +ME ++ + S C
Sbjct: 457 VAMSDSHFVVVNEDGSAYAWGEGTH--GQLG-LTALEAW--KHYPSRMESVRNYHVVSAC 511
Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
G T +T AG L + G ALG ++ + P+ + L +++ + G+ H A
Sbjct: 512 AGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLA 571
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSD-DISFCKVACG 527
+ G+ ++ WG G LG G+ + + P + +S K+ CG
Sbjct: 572 L-----SREGA-------VYVWGTSTCGALGLGNYQQQQKFPQKILLSHVKTKPSKIYCG 619
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC-GSYHIAVV 586
+ L A G++ GS DY +LG S K + + H+ + AC S H +
Sbjct: 620 PDTSAVLFANGELHVCGSNDYNKLGFQRSA-KITAFKKVQLPHKVTQ--ACFSSTHSVFL 676
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
VYT G+ A GQ G + PTLV++++ + + C T
Sbjct: 677 VEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRYIVKANCSDQCT 725
Score = 155 (59.6 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 59/215 (27%), Positives = 89/215 (41%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P +ES S G +LVT+ G + S G + LG + + PKLI L
Sbjct: 496 PSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHLALGQDEQRNYHSPKLIARLA 555
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ VA G H A++ G +Y WG LGL G + + P+K+ +
Sbjct: 556 DVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGL-GNYQQQQKF-PQKILLSHVKTKP 613
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
S I CGP +A + + G+L G + LG + + ++V+ L K A
Sbjct: 614 SKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQRSAKITAFKKVQ-LPH-KVTQACFSST 671
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
H+ +VE G ++T G AEGQ G
Sbjct: 672 HSVFLVE--------GGY----VYTMGRNAEGQRG 694
Score = 154 (59.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 56/217 (25%), Positives = 91/217 (41%)
Query: 441 SSTSVPREV----ETLKELKTV-----MASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFT 490
+ T+ P E+ L +LK MA + A IV+VA S ++ +
Sbjct: 416 ADTAAPHEILEKRSVLYQLKAFGTCFSMAPIQLPPKAVIVDVAMSDSHFVVVNEDGSAYA 475
Query: 491 WGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
WG+G GQLG E + P ++ + G TI +T G + S GS +
Sbjct: 476 WGEGTHGQLGLTALEAWKHYPSRMESVRNYHVVSACAGDGFTILVTQAGSLLSCGSNAHL 535
Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG ++ + +E +A G H+ +S + VY WG G LG G+ +
Sbjct: 536 ALGQDEQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQ 595
Query: 610 NKQT-PT--LVEALRDKQVKSVVCGSNFTAAICLHKG 643
+Q P L+ ++ K K + CG + T+A+ G
Sbjct: 596 QQQKFPQKILLSHVKTKPSK-IYCGPD-TSAVLFANG 630
Score = 141 (54.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/214 (22%), Positives = 100/214 (46%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSY 338
++R+ PK++ + + +A G +H + ++++G ++ WG + G LG G + +
Sbjct: 541 EQRNYHSPKLIARLADVRVEQVAAGLQHVLALSREGAVYVWGTSTCGALGLGNYQQQQKF 600
Query: 339 P-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKV 396
P K++ + + + CG + + +G+L+ G +N LG + ++I+ + +KV
Sbjct: 601 PQKILLSHVKTKPSKIYCGPDTSAVLFANGELHVCGSNDYNKLGFQ-RSAKITAF--KKV 657
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
Q+ +++ C H+ + G ++T G G G +S P V+++K
Sbjct: 658 --QLPH-KVTQACFSSTHSVFLVEGGYVYTMGRNAEGQRGIRHCNSVDHPTLVDSVKSRY 714
Query: 457 TVMASCGVWHTAA-----IVEVAGKTSGSNGLSS 485
V A+C T I+ V G +G G+ S
Sbjct: 715 IVKANCSDQCTIVASEDNIITVWGTRNGLPGIGS 748
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 18/68 (26%), Positives = 30/68 (44%)
Query: 671 CGLV-YCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTS--ESGSNSQIPRNSSGL- 726
CG Y KL ++S K ++ P++V CF ++ E G + RN+ G
Sbjct: 635 CGSNDYNKL-GFQRSAKITAFKKVQLPHKVTQACFSSTHSVFLVEGGYVYTMGRNAEGQR 693
Query: 727 -FQNCKRV 733
++C V
Sbjct: 694 GIRHCNSV 701
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 212 (79.7 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 53/157 (33%), Positives = 84/157 (53%)
Query: 487 KLFTWGDGAEGQLGHGDAEPR-VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
+++ G EGQLG GD + R L + +++ G + + ALTA G++++ G
Sbjct: 4 QVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFGE 63
Query: 546 ADYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
+ G+LG P K P + G I + I+ +ACG H V++ K+ VYT+G G GQ
Sbjct: 64 PESGKLGLPPKLLVNHKVPQLVPG-ISEKVIQ-VACGGGHTVVLTEKA-VYTFGLGQFGQ 120
Query: 603 LGHGD-NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
LG G P ++E+++DK++ V CG N TA I
Sbjct: 121 LGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 195 (73.7 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 53/159 (33%), Positives = 85/159 (53%)
Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-IHMVACGEFHTCAVTLSGDLYTWG 373
GQ+++ G + G+LG G + S LI + I ++ G + A+T G+LYT+G
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAEGELYTFG 62
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
+ LGL ++ ++H +P+ V G E ++ + CG HT +T ++TFG G F
Sbjct: 63 EPESGKLGLPPKLL-VNHKVPQLVPGISE--KVIQVACGGGHTVVLTEKA-VYTFGLGQF 118
Query: 433 GALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAI 470
G LG G + TS P+ +E++K+ K CG HTA I
Sbjct: 119 GQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 157
Score = 149 (57.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 42/124 (33%), Positives = 68/124 (54%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACG 356
+ ++ GS + +T +G+++++GE GKLG + V++ P+L+ ++ + VACG
Sbjct: 40 KQLSAGSNTSAALTAEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGIS-EKVIQVACG 98
Query: 357 EFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
HT +T +YT+G G LGL E S P KV ++ +IS +CCG HT
Sbjct: 99 GGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSE--P-KVIESVKDKKISHVCCGENHT 154
Query: 416 AAIT 419
A IT
Sbjct: 155 ALIT 158
Score = 127 (49.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 54/177 (30%), Positives = 81/177 (45%)
Query: 367 GDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
G +Y T G+ LGL G E S + +S +I + G +AA+T+ G+L+
Sbjct: 3 GQVYATGGNNEGQLGL-GDTDERSAF--HLISFFTSQHKIKQLSAGSNTSAALTAEGELY 59
Query: 426 TFGDGTFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
TFG+ G LG + + VP+ V + E K + +CG HT + E
Sbjct: 60 TFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGGHTVVLTE----------- 107
Query: 484 SSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
K ++T+G G GQLG G +EP+V+ VK D V CG + T +T
Sbjct: 108 --KAVYTFGLGQFGQLGLGTFTFETSEPKVIE-SVK---DKKISHVCCGENHTALIT 158
Score = 122 (48.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLID 343
L+P + E + +ACG H V++T++ ++++G G G+LG G + S PK+I+
Sbjct: 84 LVPGISEKVI-----QVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIE 137
Query: 344 ALNGSNIHMVACGEFHTCAVT 364
++ I V CGE HT +T
Sbjct: 138 SVKDKKISHVCCGENHTALIT 158
Score = 112 (44.5 bits), Expect = 0.00012, P = 0.00012
Identities = 46/172 (26%), Positives = 76/172 (44%)
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAIVEVAGKTSGS 480
G+++ G G LG GD S + + K S G +T+A + G+
Sbjct: 3 GQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGS-NTSAALTAEGE---- 57
Query: 481 NGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
L+T+G+ G+LG +V L +S+ + +VACG T+ LT
Sbjct: 58 -------LYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKV--IQVACGGGHTVVLTEK 108
Query: 538 GQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVS 587
V++ G +GQLG T + P IE ++K + I + CG H A+++
Sbjct: 109 A-VYTFGLGQFGQLGLGTFTFETSEPKVIE-SVKDKKISHVCCGENHTALIT 158
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 243 (90.6 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 101/374 (27%), Positives = 166/374 (44%)
Query: 287 PKVLE---STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
PK++E + L SIA G KH++ +T G+++SWG +LG G + SY L
Sbjct: 231 PKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQ 290
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
+N NI ++ + + + +N G Q S + + S +
Sbjct: 291 LIN-FNI------SYNNNNNNNNNNSTNNNNNNNNDGAQQQFS-----LSQNSSSNNNKI 338
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS--STSVPREVETLKELKTVMAS 461
+I + CG +A IT G LFTFG G G LG G++S S P+ V++L+ + S
Sbjct: 339 KIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMS 398
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVK---VSD 517
G H+ + + GL +F++G +GQLG G + + +P ++ S
Sbjct: 399 SGGGHSLVLT--------NKGL----VFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQ 446
Query: 518 D-----ISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTG--KFPTRIEGN-- 567
I+ KV+ G +IA++ ++ G +DYG LG S G P I N
Sbjct: 447 QQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSV 506
Query: 568 -IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
+ + D++ G H +S +Y+WG A +LG +EN+ TP + K K
Sbjct: 507 VVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRLGFKSDENQLTPKKC-FINSKDSK 565
Query: 627 SVV--CGSNFTAAI 638
++ CG T +
Sbjct: 566 PLLFTCGEIITIIV 579
Score = 142 (55.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS---NIHMVACGE 357
I+ G+ H+ +T QG ++++G+G GKLGHG S PKL++ + +A G
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGG 252
Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHW-IPRKVS 397
H+ A+T+ G +Y+WG LGL G S S++ +P+ ++
Sbjct: 253 KHSLALTICGKVYSWGGNDSCQLGL-GNGSSSSYYSLPQLIN 293
Score = 137 (53.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 48/144 (33%), Positives = 69/144 (47%)
Query: 365 LSGDLYT--WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
L D Y WG+GI N +S I ++ Q + + IS+ G H++ IT G
Sbjct: 155 LESDHYITIWGNGIRNYKNCN-MSSIGF---SEMYNQQKIVLIST---GAIHSSFITDQG 207
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVE---TLKELKTVMASCGVWHTAAIVEVAGKTSG 479
L+TFGDG G LGHG+ S S P+ VE T L+ V + G H+ A+ + GK
Sbjct: 208 NLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALT-ICGK--- 263
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD 503
+++WG QLG G+
Sbjct: 264 --------VYSWGGNDSCQLGLGN 279
Score = 134 (52.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 40/127 (31%), Positives = 67/127 (52%)
Query: 320 WGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
WG G + + ++S + N I +++ G H+ +T G+LYT+GDG+ L
Sbjct: 164 WGNG----IRNYKNCNMSSIGFSEMYNQQKIVLISTGAIHSSFITDQGNLYTFGDGL--L 217
Query: 380 GLLGQVSEISHWIPRKVSG-QME-GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
G LG + S+ P+ V Q + L++ SI G H+ A+T GK++++G LG
Sbjct: 218 GKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGL 277
Query: 438 GDRSSTS 444
G+ SS+S
Sbjct: 278 GNGSSSS 284
Score = 50 (22.7 bits), Expect = 9.4e-16, Sum P(2) = 9.4e-16
Identities = 19/80 (23%), Positives = 33/80 (41%)
Query: 675 YCKLCSSKKSMKTALAPEINKPYRVCDDCFIK-----LNTTSESGSNSQIPRNSSGLFQN 729
+CK S + S K + E++ +CDD +N S + +N+ N++ N
Sbjct: 1004 FCKRNSIELSKKIEVI-ELDYDQNLCDDDDNNHENNSVNNNSNNNNNNNNNNNNNNNNNN 1062
Query: 730 CKRVTEKENMNSRSATDGQS 749
N+NS S D +
Sbjct: 1063 NNNNNIDNNINSNSINDSSN 1082
Score = 46 (21.3 bits), Expect = 2.5e-15, Sum P(2) = 2.5e-15
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 706 KLNTTSESGSNSQIPR-NSSGLFQNCKRVTEKENMNSRS 743
K N SG+ S NS+ LF N E+ N N+ +
Sbjct: 1562 KFNLFENSGTESPFYLLNSNDLFNNNNNNNEENNNNNNN 1600
Score = 38 (18.4 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 707 LNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSAT 745
+N++S+S N I NSS + ++ N N +S T
Sbjct: 612 VNSSSDSNFNKSIIDNSS-----TTTIIKQTNNNIKSTT 645
Score = 38 (18.4 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 810 NSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFL 853
N+ + NS I + S N+N N E L+ +L L + Q L
Sbjct: 1066 NNIDNNINSNSINDSSNNNNNNNNIEK--LKNELIKLKKDEQKL 1107
Score = 37 (18.1 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 10/51 (19%), Positives = 20/51 (39%)
Query: 701 DDCFIKLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKP 751
+D F N +E +N+ N++ N N N+ + + + P
Sbjct: 1581 NDLFNNNNNNNEENNNNNNNNNNNNNNNNNNN-NNNNNNNNNNNNNNEENP 1630
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 192 (72.6 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 64/177 (36%), Positives = 91/177 (51%)
Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGS 348
L S + L +I CG +H +++T G ++S G + +LG G ++ P L+ AL+G
Sbjct: 1167 LLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGM 1225
Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS--GQMEGLQIS 406
NI M+ G++H AV G LY WG GI+ G LGQ S + P+ VS + LQIS
Sbjct: 1226 NITMLEAGQYHNAAVA-DGKLYMWGWGIY--GQLGQGSCENIATPQLVSFFKFKKILQIS 1282
Query: 407 S------ICCG-P-WHTAAITSAGKLFTFGDGTFGALG-----HGDRSSTSVPREVE 450
+ CG P H A +LF FG FG LG HGD + T++P +E
Sbjct: 1283 LGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGD-TKTNLPVRLE 1338
Score = 173 (66.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 75/308 (24%), Positives = 127/308 (41%)
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGD-GI---HNLGLLGQVSEISHWIPR-KVSG 398
A+ S ++ G + CA + G Y WG GI ++ + E +H + +
Sbjct: 1111 AIESSRFKPISAGCAY-CACVVDGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLS 1169
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKT 457
Q+ LQ+ +I CG HT +T+ G L++ G+ LG G ++ P V L +
Sbjct: 1170 QLN-LQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNI 1227
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
M G +H AA+ + G KL+ WG G GQLG G E P V
Sbjct: 1228 TMLEAGQYHNAAVAD------G-------KLYMWGWGIYGQLGQGSCENIATPQLVSFFK 1274
Query: 518 DISFCKVACGHSITIALTAT-----------GQVFSMGSADYGQLGSPGST-G----KFP 561
+++ GH+ T+ L ++F GS +GQLG+ S G P
Sbjct: 1275 FKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLP 1334
Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
R+E + + I + V + ++TWG ++ Q N+ K+ + +
Sbjct: 1335 VRLE--VGDCSLRLIHTKFFTNLAVDEQDRLFTWG--SSPQALRLANQIKRRANAKQKME 1390
Query: 622 DKQVKSVV 629
+ Q + ++
Sbjct: 1391 ENQQRELL 1398
Score = 136 (52.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPG--STGKFPTRIEGNIKHRYIEDIACGSY 581
+ CG T+ LT G ++S+G+ + QLG P + + I + G Y
Sbjct: 1178 IKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTA-LDGMNITMLEAGQY 1235
Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
H A V+ ++Y WG G GQLG G EN TP LV + K++ + G T +C
Sbjct: 1236 HNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1292
Score = 102 (41.0 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT--PTLVEALRDKQVKSVVC 630
I I+ G +H ++SS +YTWGK QLG D + + P+ ++++ ++ V C
Sbjct: 1503 ILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSI--ERPMYVDC 1560
Query: 631 GSNFT 635
GS+FT
Sbjct: 1561 GSDFT 1565
Score = 88 (36.0 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 34/96 (35%), Positives = 41/96 (42%)
Query: 466 HTAAIVEVAGKTSG-SNGL-------SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
H EVAG+ S+GL SS L+TWG E QLG D + R V L D
Sbjct: 1492 HLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAV-LKPSPID 1550
Query: 518 DISF-CKVACGHSITIALTATGQVFSMGSADYGQLG 552
I V CG T+ +T V + G GQ G
Sbjct: 1551 SIERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCG 1586
Score = 88 (36.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/77 (25%), Positives = 37/77 (48%)
Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
AL P ++ + ++ + G H V G+++ WG G G+LG G +++ P+L+
Sbjct: 1213 ALQPMLVTALDGMNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVS 1271
Query: 344 ALNGSNIHMVACGEFHT 360
I ++ G HT
Sbjct: 1272 FFKFKKILQISLGHAHT 1288
>UNIPROTKB|F1P3N0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AADN02026016
EMBL:AADN02026017 IPI:IPI00579944 Ensembl:ENSGALT00000001779
Uniprot:F1P3N0
Length = 454
Score = 215 (80.7 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 90/321 (28%), Positives = 141/321 (43%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK--LID 343
+P LE ++CG H++++T +F+ G S G+ G V D Y + LI
Sbjct: 155 IPLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHLIH 214
Query: 344 ALNG--SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
LN S + V CG+ H+ T G ++ G G LG + S +P K+ G +
Sbjct: 215 QLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITS--VPTKLGGDIA 272
Query: 402 GL---QISSI--CCGPWHTAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKEL 455
G+ Q+SS CC A++ G LF +G+ + L + + +VPR + K
Sbjct: 273 GVNIVQVSSYGDCC-----LAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLP-FKIG 326
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH--GDAEPRVVPLCV 513
K A+CG + E G+ +F WG G G+ + A P ++P +
Sbjct: 327 KIKEAACGGTGNIVLTE-----EGA-------VFVWGYGILGKGPNLTETAVPEMIPPSL 374
Query: 514 ----KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNI 568
S D+ +V CG S ALT G++F G G LG + FP R+ I
Sbjct: 375 FGWSDFSSDVRVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRV--TI 432
Query: 569 KHRYIEDIACGSYH-IAVVSS 588
+ D+ACG H +++V S
Sbjct: 433 PGEVV-DVACGVDHMVSMVKS 452
Score = 175 (66.7 bits), Expect = 8.1e-10, P = 8.1e-10
Identities = 85/300 (28%), Positives = 129/300 (43%)
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGL--Q 404
+ + V+CG H+ +T S ++T G+ ++ G G+ V E + + Q+ +
Sbjct: 165 TRVLQVSCGRAHSLVLTDSEGVFTMGN--NSYGQCGRKVVEDEIYSESHLIHQLNDFDSR 222
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ + CG H+ T G +F G G G G G + TSVP + L +A GV
Sbjct: 223 VVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVPTK------LGGDIA--GV 274
Query: 465 WHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VP--LCVKVSDDIS 520
IV+V+ +S + LF WG+ QL +V VP L K+
Sbjct: 275 ----NIVQVSSYGDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIG---K 327
Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGS-PGSTGK-FPTRIEGNIK--HRYIEDI 576
+ ACG + I LT G VF G YG LG P T P I ++ + D+
Sbjct: 328 IKEAACGGTGNIVLTEEGAVFVWG---YGILGKGPNLTETAVPEMIPPSLFGWSDFSSDV 384
Query: 577 A-----CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
CG H A ++++ E++ WGK G LG G E++ P V +V V CG
Sbjct: 385 RVARVRCGLSHFAALTNRGELFVWGKNLRGCLGIGRMEDQYFPWRVTI--PGEVVDVACG 442
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 79/321 (24%), Positives = 125/321 (38%)
Query: 311 VTKQGQIFSWGEGSGGKLG--HGVEADVSY--PKLIDAL-----NGSNIHMVACGEFHTC 361
V ++ ++F WG G LG V+ D + P+ I A I ACG T
Sbjct: 52 VKRKDRVFVWGFSYSGALGVPSFVKPDAGWKKPRRIQATPYRLETEEKITSAACGYGFTL 111
Query: 362 AVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG---PWHTAA 417
+ + D+ WG G++ LG I + G L+ S I P T
Sbjct: 112 LSSNTTDITKVWGMGLNKDSQLG----FQRSIRDRTKGYEYVLEPSPIPLPLEKPQKTRV 167
Query: 418 I-TSAGK----LFTFGDGTF--GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
+ S G+ + T +G F G +G V E+ + L + + + +
Sbjct: 168 LQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVVEDEIYSESHL---IHQLNDFDSRVV 224
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACG 527
V G+ +F G GA+GQ G G VP K+ DI+ +V+
Sbjct: 225 QVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNITSVP--TKLGGDIAGVNIVQVSSY 282
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
+A++ G +F G+++Y QL S T + K I++ ACG V++
Sbjct: 283 GDCCLAVSDEGDLFGWGNSEYLQLASVTETTQVNVPRHLPFKIGKIKEAACGGTGNIVLT 342
Query: 588 SKSEVYTWGKGANGQLGHGDN 608
+ V+ WG G LG G N
Sbjct: 343 EEGAVFVWGYGI---LGKGPN 360
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 47/185 (25%), Positives = 75/185 (40%)
Query: 440 RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS-GSNGLSSKKLFTWGDGAEGQ 498
R + P +ET E K A+CG T T GL+ + +
Sbjct: 85 RRIQATPYRLET--EEKITSAACGYGFTLLSSNTTDITKVWGMGLNKDSQLGFQRSIRDR 142
Query: 499 L-GHGDA-EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
G+ EP +PL ++ +V+CG + ++ LT + VF+MG+ YGQ G
Sbjct: 143 TKGYEYVLEPSPIPLPLEKPQKTRVLQVSCGRAHSLVLTDSEGVFTMGNNSYGQCGRKVV 202
Query: 557 TGKFPTRIEGNIKHRY------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
+ + E ++ H+ + + CG H + K V+ G GA+GQ G G
Sbjct: 203 EDEIYS--ESHLIHQLNDFDSRVVQVVCGQDHSLFRTKKGAVFACGWGADGQTGLGHYNI 260
Query: 611 KQTPT 615
PT
Sbjct: 261 TSVPT 265
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 226 (84.6 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V ++++GQ+++ G G GG+LGHG E P+L++ LNG N VA +
Sbjct: 181 QVVLC-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKD 239
Query: 359 HTCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTA 416
HT +T G +YT+G I H LG++ S + +PR++ + ++G I + G +HT
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 417 AITSAGKLFTFG--DGTFGAL--GHGDRSSTSVPREVETL--KE--LKTVMASCG 463
T ++T G G G L +G++ T+ PR+V L K+ L V AS G
Sbjct: 298 LWTREA-VYTMGLNGGQLGCLLDPNGEKCVTA-PRQVSALHHKDIALSLVAASDG 350
Score = 215 (80.7 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 77/253 (30%), Positives = 116/253 (45%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T +++WG+ + LGHG + +P+L+D + S I++ V C +FH+
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVF 191
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + G S + HT +T G
Sbjct: 192 LSQKGQVYTCGHGPG--GRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDG 248
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVETLKELK--TVMA-SCGVWHTAAIVEVAGKTS 478
++TFG F LG SS +VPR+++ K LK T++ + G +HT A T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQA-KYLKGRTIIGVAAGRFHTVLWTREAVYTM 307
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKV--SDDISFCKVACGHSITIALT 535
G NG G G L + E V P V DI+ VA T+ +T
Sbjct: 308 GLNG-----------GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVT 356
Query: 536 ATGQVFSMGSADY 548
G ++ + ADY
Sbjct: 357 TRGDIYLL--ADY 367
Score = 202 (76.2 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 74/231 (32%), Positives = 112/231 (48%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T ++T+GD T LGHG ++S P EL + + G++ I +V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHP-------ELVDLFSRSGIY----IKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ + + +VA T+ LT
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P S+ P +I+ +K R I +A G +H V+ ++ VYT
Sbjct: 248 GCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFH-TVLWTREAVYT 306
Query: 595 WGKGANGQLGH--GDNENK--QTPTLVEALRDKQVK-SVVCGSNFTAAICL 640
G GQLG N K P V AL K + S+V S+ A +C+
Sbjct: 307 MGLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASD-GATVCV 355
Score = 47 (21.6 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 791 SRAPSPISRKSSPACSITMNSFTDLANSE 819
S+AP P++ +S S++ SF D E
Sbjct: 982 SKAPKPVNAWASSLHSVSSKSFRDFLLEE 1010
Score = 39 (18.8 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 719 IPRNSSGLFQNCKRVTEK--ENMNS----RSATDGQSKPKGKSYHASPSLNGKFQWEPNS 772
+ +SSG + K+V+ K EN + R +T G P+G P L+ W +S
Sbjct: 1014 VTSHSSG--DHVKKVSFKGIENSQAPKIVRCSTHGTPGPEGNHISDLPLLDSPNPWLSSS 1071
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 226 (84.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V ++++GQ+++ G G GG+LGHG E P+L++ LNG N VA +
Sbjct: 181 QVVLC-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKD 239
Query: 359 HTCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTA 416
HT +T G +YT+G I H LG++ S + +PR++ + ++G I + G +HT
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 417 AITSAGKLFTFG--DGTFGAL--GHGDRSSTSVPREVETL--KE--LKTVMASCG 463
T ++T G G G L +G++ T+ PR+V L K+ L V AS G
Sbjct: 298 LWTREA-VYTMGLNGGQLGCLLDPNGEKCVTA-PRQVSALHHKDIALSLVAASDG 350
Score = 215 (80.7 bits), Expect = 8.2e-13, Sum P(2) = 8.2e-13
Identities = 77/253 (30%), Positives = 116/253 (45%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T +++WG+ + LGHG + +P+L+D + S I++ V C +FH+
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVF 191
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + G S + HT +T G
Sbjct: 192 LSQKGQVYTCGHGPG--GRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDG 248
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVETLKELK--TVMA-SCGVWHTAAIVEVAGKTS 478
++TFG F LG SS +VPR+++ K LK T++ + G +HT A T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQA-KYLKGRTIIGVAAGRFHTVLWTREAVYTM 307
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKV--SDDISFCKVACGHSITIALT 535
G NG G G L + E V P V DI+ VA T+ +T
Sbjct: 308 GLNG-----------GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVT 356
Query: 536 ATGQVFSMGSADY 548
G ++ + ADY
Sbjct: 357 TRGDIYLL--ADY 367
Score = 202 (76.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 74/231 (32%), Positives = 112/231 (48%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T ++T+GD T LGHG ++S P EL + + G++ I +V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHP-------ELVDLFSRSGIY----IKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ + + +VA T+ LT
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P S+ P +I+ +K R I +A G +H V+ ++ VYT
Sbjct: 248 GCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFH-TVLWTREAVYT 306
Query: 595 WGKGANGQLGH--GDNENK--QTPTLVEALRDKQVK-SVVCGSNFTAAICL 640
G GQLG N K P V AL K + S+V S+ A +C+
Sbjct: 307 MGLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASD-GATVCV 355
Score = 47 (21.6 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 791 SRAPSPISRKSSPACSITMNSFTDLANSE 819
S+AP P++ +S S++ SF D E
Sbjct: 1168 SKAPKPVNAWASSLHSVSSKSFRDFLLEE 1196
Score = 39 (18.8 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 719 IPRNSSGLFQNCKRVTEK--ENMNS----RSATDGQSKPKGKSYHASPSLNGKFQWEPNS 772
+ +SSG + K+V+ K EN + R +T G P+G P L+ W +S
Sbjct: 1200 VTSHSSG--DHVKKVSFKGIENSQAPKIVRCSTHGTPGPEGNHISDLPLLDSPNPWLSSS 1257
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 226 (84.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V ++++GQ+++ G G GG+LGHG E P+L++ LNG N VA +
Sbjct: 181 QVVLC-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKD 239
Query: 359 HTCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTA 416
HT +T G +YT+G I H LG++ S + +PR++ + ++G I + G +HT
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 417 AITSAGKLFTFG--DGTFGAL--GHGDRSSTSVPREVETL--KE--LKTVMASCG 463
T ++T G G G L +G++ T+ PR+V L K+ L V AS G
Sbjct: 298 LWTREA-VYTMGLNGGQLGCLLDPNGEKCVTA-PRQVSALHHKDIALSLVAASDG 350
Score = 215 (80.7 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 77/253 (30%), Positives = 116/253 (45%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T +++WG+ + LGHG + +P+L+D + S I++ V C +FH+
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVF 191
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + G S + HT +T G
Sbjct: 192 LSQKGQVYTCGHGPG--GRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDG 248
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVETLKELK--TVMA-SCGVWHTAAIVEVAGKTS 478
++TFG F LG SS +VPR+++ K LK T++ + G +HT A T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSSCNVPRQIQA-KYLKGRTIIGVAAGRFHTVLWTREAVYTM 307
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKV--SDDISFCKVACGHSITIALT 535
G NG G G L + E V P V DI+ VA T+ +T
Sbjct: 308 GLNG-----------GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVT 356
Query: 536 ATGQVFSMGSADY 548
G ++ + ADY
Sbjct: 357 TRGDIYLL--ADY 367
Score = 202 (76.2 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 74/231 (32%), Positives = 112/231 (48%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T ++T+GD T LGHG ++S P EL + + G++ I +V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHP-------ELVDLFSRSGIY----IKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ + + +VA T+ LT
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P S+ P +I+ +K R I +A G +H V+ ++ VYT
Sbjct: 248 GCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFH-TVLWTREAVYT 306
Query: 595 WGKGANGQLGH--GDNENK--QTPTLVEALRDKQVK-SVVCGSNFTAAICL 640
G GQLG N K P V AL K + S+V S+ A +C+
Sbjct: 307 MGLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASD-GATVCV 355
Score = 47 (21.6 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 791 SRAPSPISRKSSPACSITMNSFTDLANSE 819
S+AP P++ +S S++ SF D E
Sbjct: 1183 SKAPKPVNAWASSLHSVSSKSFRDFLLEE 1211
Score = 39 (18.8 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 17/60 (28%), Positives = 27/60 (45%)
Query: 719 IPRNSSGLFQNCKRVTEK--ENMNS----RSATDGQSKPKGKSYHASPSLNGKFQWEPNS 772
+ +SSG + K+V+ K EN + R +T G P+G P L+ W +S
Sbjct: 1215 VTSHSSG--DHVKKVSFKGIENSQAPKIVRCSTHGTPGPEGNHISDLPLLDSPNPWLSSS 1272
>RGD|1307558 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region 16"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA;ISO] RGD:1307558 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:CH473973 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
OrthoDB:EOG4F1X33 IPI:IPI00189798 RefSeq:NP_001101802.1
UniGene:Rn.40552 Ensembl:ENSRNOT00000002032 GeneID:360796
KEGG:rno:360796 UCSC:RGD:1307558 NextBio:674123 Uniprot:D4AE90
Length = 461
Score = 207 (77.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 100/362 (27%), Positives = 148/362 (40%)
Query: 300 SIACGSKHAVLVTKQGQIFS-WGEG--SGGKLG-HGVEADVS--Y---------PKLIDA 344
S ACG +L +K + WG G +LG H D + Y P +D
Sbjct: 108 SAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDR 167
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LG---LLGQVSEISHWIPRKVSGQM 400
+ + V+CG H+ +T +++ G+ H G + +V SH + R
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNAHGQCGRKVVEDEVYSESHKVHRMQD--F 225
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
EG Q+ + CG H+ +T G++++ G G G G G + TS P +L +A
Sbjct: 226 EG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP------SKLGGDLA 278
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDI 519
V A + S G+ F WG+ QL +V VP C+ S
Sbjct: 279 GVTVVQVATYGDCCLALSADGGV-----FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVG 333
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS-PG-STGKFPTRI--------EGNIK 569
+VACG + L G VF G YG LG P S P I E N +
Sbjct: 334 KVKQVACGGTGCAILNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTEFNPE 390
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
+ + I CG H A +++K E++ WGK G LG G E++ P V + + V V
Sbjct: 391 VK-VSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-DVA 447
Query: 630 CG 631
CG
Sbjct: 448 CG 449
Score = 190 (71.9 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 71/247 (28%), Positives = 110/247 (44%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFH 359
+ CG H++ +T +G+++S G G+ G+ G G S P KL L G + VA +
Sbjct: 232 VVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVAT--YG 289
Query: 360 TCAVTLSGD--LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
C + LS D ++ WG+ + L L +PR + G ++ + CG A
Sbjct: 290 DCCLALSADGGVFGWGNSEY-LQLASVTDSTQVNVPRCLPFSGVG-KVKQVACGGTGCAI 347
Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVE-TL-------KELKTVMASCGVWHTA 468
+ G +F +G +G LG G S T++P + TL E+K CG+ H A
Sbjct: 348 LNEEGHVFVWG---YGILGKGPNLSETALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFA 404
Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG- 527
A+ + G +LF WG G LG G E + P V + + VACG
Sbjct: 405 ALT--------NKG----ELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--VDVACGV 450
Query: 528 -HSITIA 533
H +T+A
Sbjct: 451 DHMVTLA 457
Score = 133 (51.9 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
S D +P+ L + V + +ACG ++ ++G +F WG G GK G + ++
Sbjct: 314 SVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAILNEEGHVFVWGYGILGK-GPNL-SET 371
Query: 337 SYPKLID----ALNGSN----IHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSE 387
+ P++I L N + + CG H A+T G+L+ WG I LG+ G++ +
Sbjct: 372 ALPEMIPPTLFGLTEFNPEVKVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLED 430
Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+ P +V+ M G + + CG H + +
Sbjct: 431 --QYFPWRVT--MPGEPVD-VACGVDHMVTLAKS 459
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 214 (80.4 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 55/182 (30%), Positives = 94/182 (51%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V ++ +GQI++ G G GG+LGHG E P+L++ L+ +A +
Sbjct: 184 QVVLC-KFHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKD 242
Query: 359 HTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTA 416
HT +T G +YT+G + H LG+L + S +PR+V + ++G + + G +HT
Sbjct: 243 HTVVLTEDGCVYTFGLNTFHQLGILPPPANCS--VPRQVQAKNLKGRMVIGVAAGRFHTV 300
Query: 417 AITSAGKLFTFG--DGTFGAL--GHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAI 470
T ++T G G G L +G++ T+ PR+V L K++ + S T +
Sbjct: 301 LWTKEA-VYTMGLNGGQLGYLLDPNGEKCVTA-PRQVSALHHKDVSVSLVSASDGATVCV 358
Query: 471 VE 472
E
Sbjct: 359 TE 360
Score = 211 (79.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 74/252 (29%), Positives = 114/252 (45%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T ++++WG LGHG + +P+L+D +++++ V C +FH+
Sbjct: 136 HVVFKKTDLTEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLC-KFHSVF 194
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + Q S I HT +T G
Sbjct: 195 LSHKGQIYTCGHG--QGGRLGHGDEQTCLVPRLVEG-LSSHQCSQIAAAKDHTVVLTEDG 251
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVET--LKELKTVMASCGVWHTAAIVEVAGKTSG 479
++TFG TF LG ++ SVPR+V+ LK + + G +HT + A T G
Sbjct: 252 CVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEAVYTMG 311
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKV--SDDISFCKVACGHSITIALTA 536
NG G G L + E V P V D+S V+ T+ +T
Sbjct: 312 LNG-----------GQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCVTE 360
Query: 537 TGQVFSMGSADY 548
G ++ + ADY
Sbjct: 361 RGDIYLL--ADY 370
Score = 192 (72.6 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 66/230 (28%), Positives = 105/230 (45%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T +++T+G+ LGHG + S P V+ ++ I +V
Sbjct: 142 TDLTEVYTWGNNINFTLGHGGQQSKHHPELVDLFPR-----------NSVYIKQVVLCKF 190
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ ++A T+ LT
Sbjct: 191 HSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTED 250
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEG-NIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P + P +++ N+K R + +A G +H V+ +K VYT
Sbjct: 251 GCVYTFGLNTFHQLGILPPPANCSVPRQVQAKNLKGRMVIGVAAGRFH-TVLWTKEAVYT 309
Query: 595 WGKGANGQLGH--GDNENK--QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
G GQLG+ N K P V AL K V + ++ A +C+
Sbjct: 310 MGLNG-GQLGYLLDPNGEKCVTAPRQVSALHHKDVSVSLVSASDGATVCV 358
Score = 134 (52.2 bits), Expect = 0.00011, P = 0.00011
Identities = 43/159 (27%), Positives = 71/159 (44%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEA 334
+ D + L+P+++E IA H V++T+ G ++++G + +LG A
Sbjct: 212 LGHGDEQTCLVPRLVEGLSSHQCSQIAAAKDHTVVLTEDGCVYTFGLNTFHQLGILPPPA 271
Query: 335 DVSYPKLIDALN--GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLG-LLGQVSEISHW 391
+ S P+ + A N G + VA G FHT T +YT G LG LL E
Sbjct: 272 NCSVPRQVQAKNLKGRMVIGVAAGRFHTVLWTKEA-VYTMGLNGGQLGYLLDPNGEKCVT 330
Query: 392 IPRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
PR+VS + + +S + T +T G ++ D
Sbjct: 331 APRQVSALHHKDVSVSLVSASDGATVCVTERGDIYLLAD 369
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 206 (77.6 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 98/361 (27%), Positives = 147/361 (40%)
Query: 300 SIACGSKHAVLVTKQGQIFS-WGEG--SGGKLG-HGVEADVS--Y---------PKLIDA 344
S ACG +L +K + WG G +LG H D + Y P +D
Sbjct: 108 SAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDR 167
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LG---LLGQVSEISHWIPRKVSGQM 400
+ + V+CG H+ +T +++ G+ H G + +V SH + R
Sbjct: 168 PQETKVLQVSCGRAHSLVLTDREGVFSMGNNSHGQCGRKVVEDEVYSESHKVHRMQD--F 225
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
+G Q+ + CG H+ +T G++++ G G G G G + TS P +L +A
Sbjct: 226 DG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTP------SKLGGDLA 278
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDI 519
V A + S G+ F WG+ QL +V VP C+ S
Sbjct: 279 GVTVVQVATYGDCCLALSADGGV-----FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVG 333
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS-PG--STG---KFPTRIEGNIKHR-- 571
+VACG + L A G VF G YG LG P T P + G +
Sbjct: 334 KVKQVACGGTGCAVLNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPE 390
Query: 572 -YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ I CG H A +++K E++ WGK G LG G E++ P V + + V V C
Sbjct: 391 VQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-DVAC 448
Query: 631 G 631
G
Sbjct: 449 G 449
Score = 186 (70.5 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 69/247 (27%), Positives = 111/247 (44%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFH 359
+ CG H++ +T +G+++S G G+ G+ G G S P KL L G + VA +
Sbjct: 232 VVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVAT--YG 289
Query: 360 TCAVTLSGD--LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
C + LS D ++ WG+ + L L +PR + G ++ + CG A
Sbjct: 290 DCCLALSADGGVFGWGNSEY-LQLASVTDSTQVNVPRCLPFSGVG-KVKQVACGGTGCAV 347
Query: 418 ITSAGKLFTFGDGTFGALGHGDRS-STSVPREVE-TL-------KELKTVMASCGVWHTA 468
+ + G +F +G +G LG G + T++P + TL E++ CG+ H A
Sbjct: 348 LNAEGHVFVWG---YGILGKGPKLLETAIPEMIPPTLFGLTEFNPEVQVSQIRCGLSHFA 404
Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG- 527
A+ + G +LF WG G LG G E + P V + + VACG
Sbjct: 405 ALT--------NKG----ELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--VDVACGV 450
Query: 528 -HSITIA 533
H +T+A
Sbjct: 451 DHMVTLA 457
Score = 129 (50.5 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 39/152 (25%), Positives = 67/152 (44%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
S D +P+ L + V + +ACG ++ +G +F WG G GK +E +
Sbjct: 314 SVTDSTQVNVPRCLPFSGVGKVKQVACGGTGCAVLNAEGHVFVWGYGILGKGPKLLETAI 373
Query: 337 S--YPKLIDALNGSN----IHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEIS 389
P + L N + + CG H A+T G+L+ WG I LG+ G++ +
Sbjct: 374 PEMIPPTLFGLTEFNPEVQVSQIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLED-- 430
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+ P +V+ M G + + CG H + +
Sbjct: 431 QYFPWRVT--MPGEPVD-VACGVDHMVTLAKS 459
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 204 (76.9 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 100/361 (27%), Positives = 146/361 (40%)
Query: 300 SIACGSKHAVLVTKQGQIFS-WGEG--SGGKLG-HGVEADVS--Y---------PKLIDA 344
S ACG +L +K + WG G +LG H D + Y P +D
Sbjct: 112 SAACGYGFTLLSSKTKDVTKVWGMGLNKDSQLGFHRSHKDKTRGYEYVLEPSPVPLPLDR 171
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEI---SHWIPRKVSGQM 400
+ + V+CG H+ +T +++ G+ + G +EI SH + R
Sbjct: 172 PQETRVLQVSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQD--F 229
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
+G Q+ + CG H+ +T G++++ G G G G G TSVP + L +A
Sbjct: 230 DG-QVVQVVCGQDHSLFLTDKGEVYSCGWGADGQTGLGHYDITSVPTK------LGGDLA 282
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDI 519
V A + S GL F WG+ QL +V VP C+ S
Sbjct: 283 GVNVVQVATYGDCCLAVSAEGGL-----FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVG 337
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS-PGSTGK-FPTRIE----GNIKHR-- 571
+ ACG + L G VF G YG LG P FP I G +
Sbjct: 338 KVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVETAFPEVIPPTLFGLTEFNPG 394
Query: 572 -YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
++ I CG H A ++SK E++ WGK G LG G E++ P V + + V V C
Sbjct: 395 VHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-DVAC 452
Query: 631 G 631
G
Sbjct: 453 G 453
Score = 187 (70.9 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 78/305 (25%), Positives = 134/305 (43%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL--IDALNG--SNIHMVACG 356
++CG H++++T +FS G + G+ G V + Y + ++ + + V CG
Sbjct: 180 VSCGRAHSLILTDCEGVFSMGNNAYGQCGRNVVENEIYSESHKVNRMQDFDGQVVQVVCG 239
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
+ H+ +T G++Y+ G G LG S +P K+ G + G+ + +
Sbjct: 240 QDHSLFLTDKGEVYSCGWGADGQTGLGHYDITS--VPTKLGGDLAGVNVVQVATYGDCCL 297
Query: 417 AITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
A+++ G LF +G+ + L D + +VPR + K A+CG A +
Sbjct: 298 AVSAEGGLFGWGNSEYLQLASVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVL----- 352
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCV----KVSDDISFCKVACGH 528
NG +F WG G G+ G E P V+P + + + + + CG
Sbjct: 353 -----NG--EGHVFVWGYGILGK-GPNLVETAFPEVIPPTLFGLTEFNPGVHVSHIWCGL 404
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
S ALT+ G++F G G LG + FP R+ + + D+ACG H+ V
Sbjct: 405 SHFAALTSKGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPGEPV-DVACGVDHM-VTL 460
Query: 588 SKSEV 592
+KS V
Sbjct: 461 AKSFV 465
Score = 132 (51.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-- 334
S D +P+ L + V + ACG ++ +G +F WG G GK + VE
Sbjct: 318 SVTDSTQVNVPRCLPFSGVGKVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETAF 377
Query: 335 -DVSYPKL--IDALN-GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEIS 389
+V P L + N G ++ + CG H A+T G+L+ WG I LG+ G++ +
Sbjct: 378 PEVIPPTLFGLTEFNPGVHVSHIWCGLSHFAALTSKGELFVWGKNIRGCLGI-GRLED-- 434
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+ P +V+ M G + + CG H + +
Sbjct: 435 QYFPWRVT--MPGEPVD-VACGVDHMVTLAKS 463
>UNIPROTKB|F1NXI7 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00587804 Ensembl:ENSGALT00000010065 Uniprot:F1NXI7
Length = 231
Score = 182 (69.1 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 70/240 (29%), Positives = 103/240 (42%)
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
++I C H+ I A + G ++G LG G + VP + LK++ SC
Sbjct: 2 NNIAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVP---QLLKDV-----SCKCQ 50
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFC-- 522
+I G ++ G +LF G GQLG E + LC +S FC
Sbjct: 51 DIKSIAGGGGHSAVITGAG--ELFVCGHNKAGQLGLNHTEDVLCFTLCTALS---GFCVQ 105
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGS 580
+VACG TI L G V S GS +GQLG P +G P +I+ ++K + + IA G
Sbjct: 106 EVACGWDFTIILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKEKAV-GIAAGL 164
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL--------VEALRDKQVKSVVCGS 632
H + V+ WG G + ++ K P ++ L D +VK V GS
Sbjct: 165 RHALAATESGLVFQWGTGMASRAKRV-HQGKTLPVFWAAKEPCEIKGLEDVKVKRVAAGS 223
Score = 166 (63.5 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 56/201 (27%), Positives = 93/201 (46%)
Query: 281 RRDALLPKVLE--STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
+ D L+P++L+ S D +SIA G H+ ++T G++F G G+LG DV
Sbjct: 33 KEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAGQLGLNHTEDVLC 92
Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH--WIPRKV 396
L AL+G + VACG T + +G + + G G LG V +IS IP+K+
Sbjct: 93 FTLCTALSGFCVQEVACGWDFTIILGRAGLVLSCGSNA--FGQLG-VPQISGPCLIPQKI 149
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-------SVPREV 449
++ + I G H A T +G +F +G G + T P E+
Sbjct: 150 KQSLKEKAVG-IAAGLRHALAATESGLVFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEI 208
Query: 450 ETLKELKTVMASCGVWHTAAI 470
+ L+++K + G +H ++
Sbjct: 209 KGLEDVKVKRVAAGSYHCVSL 229
Score = 152 (58.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 67/249 (26%), Positives = 113/249 (45%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS--NIHMVACGE 357
+IAC H+ L+ + + G S G+LG G + DV P+L+ ++ +I +A G
Sbjct: 3 NIAC---HSHLILRATCVCLKGANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGG 59
Query: 358 FHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH-T 415
H+ +T +G+L+ G HN G LG ++ + + + G + + CG W T
Sbjct: 60 GHSAVITGAGELFVCG---HNKAGQLG-LNHTEDVLCFTLCTALSGFCVQEVACG-WDFT 114
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTS-VPREV-ETLKELKTVMASCGVWHTAAIVEV 473
+ AG + + G FG LG S +P+++ ++LKE K V + G+ H A E
Sbjct: 115 IILGRAGLVLSCGSNAFGQLGVPQISGPCLIPQKIKQSLKE-KAVGIAAGLRHALAATE- 172
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQ---LGHGDAEP----RVVPLCVKVSDDISFCKVAC 526
+GL +F WG G + + G P P +K +D+ +VA
Sbjct: 173 -------SGL----VFQWGTGMASRAKRVHQGKTLPVFWAAKEPCEIKGLEDVKVKRVAA 221
Query: 527 GHSITIALT 535
G ++LT
Sbjct: 222 GSYHCVSLT 230
Score = 118 (46.6 bits), Expect = 0.00033, P = 0.00033
Identities = 60/218 (27%), Positives = 86/218 (39%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTFGDGTFG 433
G ++ G LG + +P+ + Q I SI G H+A IT AG+LF G G
Sbjct: 21 GANSYGQLGLGHKEDVLVPQLLKDVSCKCQDIKSIAGGGGHSAVITGAGELFVCGHNKAG 80
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LG L +CG W I+ G GL + + G
Sbjct: 81 QLGLNHTEDVLCFTLCTALSGFCVQEVACG-WDFTIIL-------GRAGL----VLSCGS 128
Query: 494 GAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS--ADYGQ 550
A GQLG P ++P +K S +A G +A T +G VF G+ A +
Sbjct: 129 NAFGQLGVPQISGPCLIPQKIKQSLKEKAVGIAAGLRHALAATESGLVFQWGTGMASRAK 188
Query: 551 LGSPGST------GKFPTRIEGNIKHRYIEDIACGSYH 582
G T K P I+G ++ ++ +A GSYH
Sbjct: 189 RVHQGKTLPVFWAAKEPCEIKG-LEDVKVKRVAAGSYH 225
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 221 (82.9 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 61/177 (34%), Positives = 98/177 (55%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V ++++GQ+++ G G GG+LGHG E P+L++ L+G N VA +
Sbjct: 181 QVVLC-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKD 239
Query: 359 HTCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTA 416
HT +T G +YT+G I H LG++ S + +PR++ + ++G I + G +HT
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGIIPPPSNCN--VPRQMQAKYLKGRTIIGVAAGRFHTV 297
Query: 417 AITSAGKLFTFG-DGTFGALGH-----GDRSSTSVPREVETL--KE--LKTVMASCG 463
T ++T G +G G LGH G++ T+ PR+V L K+ L V AS G
Sbjct: 298 LWTREA-VYTLGLNG--GQLGHLLDPSGEKCVTA-PRQVSALHHKDIALSLVAASDG 350
Score = 218 (81.8 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 77/256 (30%), Positives = 120/256 (46%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T +++WG+ + LGHG + +P+L+D + S +++ V C +FH+
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLC-KFHSVF 191
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + G S + HT +T G
Sbjct: 192 LSQKGQVYTCGHGPG--GRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTEDG 248
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVETLKELK--TVMA-SCGVWHTAAIVEVAGKTS 478
++TFG F LG S+ +VPR+++ K LK T++ + G +HT A T
Sbjct: 249 CVYTFGLNIFHQLGIIPPPSNCNVPRQMQA-KYLKGRTIIGVAAGRFHTVLWTREAVYTL 307
Query: 479 GSNGLSSKKLFTWGDGAEGQLGH--GDAEPRVVPLCVKVS----DDISFCKVACGHSITI 532
G NG GQLGH + + V +VS DI+ VA T+
Sbjct: 308 GLNG--------------GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASDGATV 353
Query: 533 ALTATGQVFSMGSADY 548
+TA G ++ + ADY
Sbjct: 354 CVTARGDIYLL--ADY 367
Score = 205 (77.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 75/231 (32%), Positives = 111/231 (48%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T ++T+GD T LGHG ++S P EL + + GV+ I +V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHP-------ELVDLFSRSGVY----IKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ + +VA T+ LT
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTED 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P S P +++ +K R I +A G +H V+ ++ VYT
Sbjct: 248 GCVYTFGLNIFHQLGIIPPPSNCNVPRQMQAKYLKGRTIIGVAAGRFH-TVLWTREAVYT 306
Query: 595 WGKGANGQLGH---GDNENKQT-PTLVEALRDKQVK-SVVCGSNFTAAICL 640
G GQLGH E T P V AL K + S+V S+ A +C+
Sbjct: 307 LGLNG-GQLGHLLDPSGEKCVTAPRQVSALHHKDIALSLVAASD-GATVCV 355
Score = 40 (19.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 742 RSATDGQSKPKGKSYHASPSLNGKFQWEPNS 772
R +T G P+G + P L+ W +S
Sbjct: 1235 RCSTHGSPGPEGNRFSDVPLLDSPNPWLSSS 1265
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 206 (77.6 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 47/138 (34%), Positives = 72/138 (52%)
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+G +F WG + G+LG E D P + L + ++CGE HT +T SG ++T+G
Sbjct: 23 EGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFG 82
Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
G + G LG S PR+V ++ G +++ I CG HT A + S+G ++ FG G
Sbjct: 83 AG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK 139
Query: 433 GALGHGDRSSTSVPREVE 450
G LG G + P V+
Sbjct: 140 GQLGTGHTCNVKCPSPVK 157
Score = 189 (71.6 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 47/132 (35%), Positives = 63/132 (47%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
+F WG GQLG D E R P VK+ ++CG T LT +G VF+ G+
Sbjct: 26 VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 85
Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHG 606
GQLG + R + + IACG H +A V S +Y +G GA GQLG G
Sbjct: 86 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTG 145
Query: 607 DNENKQTPTLVE 618
N + P+ V+
Sbjct: 146 HTCNVKCPSPVK 157
Score = 171 (65.3 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 48/136 (35%), Positives = 67/136 (49%)
Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
G ++ WG ++N G LG E P V + ++ I CG HTA +T +G +FT
Sbjct: 24 GAVFGWG--MNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
FG G+ G LGH + PR V L + +CG HT A V S+GL
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-------SSGL--- 130
Query: 487 KLFTWGDGAEGQLGHG 502
++ +G GA+GQLG G
Sbjct: 131 -IYAFGCGAKGQLGTG 145
Score = 162 (62.1 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 54/170 (31%), Positives = 80/170 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
DR K+L + V+ I+CG +H ++TK G +F++G GS G+LGH D P
Sbjct: 44 DRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNP 100
Query: 340 KLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
+ + L GS + +ACG HT A V SG +Y +G G G LG + P V G
Sbjct: 101 RRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGAK--GQLGTGHTCNVKCPSPVKG 158
Query: 399 QMEGL--QISSICCG-PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
Q+S+ +H ++F+ GD TF + SS +V
Sbjct: 159 YWAAHSGQLSARADRFKYHIVK-----QIFSGGDQTFVLCSKYENSSPAV 203
Score = 144 (55.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 36/113 (31%), Positives = 55/113 (48%)
Query: 536 ATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
A G VF G + GQLG S + P ++ ++ + + I+CG H AV++ V+T
Sbjct: 22 AEGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 80
Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
+G G+ GQLGH ++ P V L +V + CG T A G+ A
Sbjct: 81 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 133
>UNIPROTKB|E9PMV6 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00976302 ProteinModelPortal:E9PMV6 SMR:E9PMV6
Ensembl:ENST00000529728 ArrayExpress:E9PMV6 Bgee:E9PMV6
Uniprot:E9PMV6
Length = 229
Score = 180 (68.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 59/199 (29%), Positives = 94/199 (47%)
Query: 310 LVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
++T+ GQ+ S G S G+LG HG V P+ I+ L+ + +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 368 DLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICC---GPWHTAAITSAGK 423
++ WG G+ + G L + + K ++ GL+ S C G H+A++T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVW-HTAAIVEVAGKTSGSN 481
++ +G G L + + + VP+++E + + V A W H A E
Sbjct: 119 VYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETG------- 170
Query: 482 GLSSKKLFTWGDGAEGQLG 500
K+FTWG GQLG
Sbjct: 171 -----KMFTWGRADYGQLG 184
Score = 171 (65.3 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 43/144 (29%), Positives = 69/144 (47%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEG---SGGKLGHGVEADVSY----PKLIDALNGSNIHMV 353
IA G +HAV T G +F WG G G +L G + + P + L S V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGP 412
G H+ ++T +G++Y WG H L + + + +P+K+ + ++++I G
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHGQ-LANEAAFLP--VPQKIEAHCFQNEKVTAIWSGW 160
Query: 413 WHTAAITSAGKLFTFGDGTFGALG 436
H A T GK+FT+G +G LG
Sbjct: 161 THLVAQTETGKMFTWGRADYGQLG 184
Score = 157 (60.3 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 55/198 (27%), Positives = 87/198 (43%)
Query: 418 ITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+T G++ + G +FG LG HG R VP+ +E KE K V + G+ H VA
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHA-----VAA 54
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD-----ISFCKVAC---G 527
SG +F WG G G + +PL + + K C G
Sbjct: 55 TASGI-------VFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 106
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVV 586
+ +LT G+V+ GS +GQL + + P +IE + ++ + I G H+
Sbjct: 107 SDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQ 166
Query: 587 SSKSEVYTWGKGANGQLG 604
+ +++TWG+ GQLG
Sbjct: 167 TETGKMFTWGRADYGQLG 184
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 487 KLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
++ + G + GQLG HG PR VVP +++ + C +A G +A TA+G VF
Sbjct: 7 QVLSCGSNSFGQLGVPHG---PRRCVVPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQ 62
Query: 543 MGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ A G+ PG T K P+R+ G +++ + GS H A ++ EVY
Sbjct: 63 WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAGEVYV 121
Query: 595 WGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG 631
WG +GQL + + P +EA ++++V ++ G
Sbjct: 122 WGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSG 159
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 50/183 (27%), Positives = 83/183 (45%)
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC---GPWHTAAITSAGKLFTFGDGT 431
G ++ G LG + H R V Q L + C G H A T++G +F +G G
Sbjct: 12 GSNSFGQLG----VPHGPRRCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG- 66
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
+ G ++P T KE V G+ ++ A+ +AG ++ + +++ W
Sbjct: 67 LASCGRRLCPGQTLPLFF-TAKEPSRVT---GLENSKAMCVLAGSDHSASLTDAGEVYVW 122
Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVS--DDISFCKVACGHSITIALTATGQVFSMGSADYG 549
G GQL + +A VP ++ + + G + +A T TG++F+ G ADYG
Sbjct: 123 GSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYG 181
Query: 550 QLG 552
QLG
Sbjct: 182 QLG 184
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 165 (63.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
+ GSKH++ G I+SWG G G+LG G + P+LI L I V G H+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 362 AVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
+ + ++YTWG+G + LG G +I + P+ V ++ + G +++ A+
Sbjct: 505 CIDSNYNVYTWGNGKFYKLGH-GN-DDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNV 562
Query: 421 AGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMAS 461
G ++ +G TF + + + +P+++ T + ++ AS
Sbjct: 563 KGDVYVWG--TFNITNNYVNYYISKLPKQINTNYKCISIHAS 602
Score = 159 (61.0 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALN-GSNIHMVACGEF 358
+ G+ H+ + +++WG G KLGHG + D+ YPKL++ LN + M++ G F
Sbjct: 496 VCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCF 555
Query: 359 HTCAVTLSGDLYTWGD-GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS---ICCGPWH 414
++ A+ + GD+Y WG I N + +S++ P++++ + + I + +C G
Sbjct: 556 NSLALNVKGDVYVWGTFNITNNYVNYYISKL----PKQINTNYKCISIHASTYVCFG--- 608
Query: 415 TAAITSAGKLFTFGD 429
IT G L +FG+
Sbjct: 609 ---ITLVGDLISFGN 620
Score = 127 (49.8 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHR 571
K + + C HS+ A G ++S G G+LG G+ + P I+G ++++
Sbjct: 436 KKKNVVIHCSAGSKHSL--ACNLHGDIYSWGYGGNGRLGL-GNIKSYNKPQLIKG-LRNK 491
Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALR-DKQV 625
I + G+ H + S VYTWG G +LGHG+++ + P LVE L +K+V
Sbjct: 492 RILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKV 547
Score = 127 (49.8 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 49/218 (22%), Positives = 96/218 (44%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H+ A G ++++G G G LG G+ S + P+ ++ L+ + + G H+ I
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI 506
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVK-VSDDISFCKVACGH 528
S+ ++TWG+G +LGHG+ + + P V+ ++ + C ++ G
Sbjct: 507 D------------SNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGC 554
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++AL G V+ G+ + K P +I N K I +Y ++
Sbjct: 555 FNSLALNVKGDVYVWGTFNITNNYVNYYISKLPKQINTNYK---CISIHASTYVCFGITL 611
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
++ ++G N N+N L++ L +K+V+
Sbjct: 612 VGDLISFGNYKNYSYEKEINDNDSDDDLIKYLINKEVE 649
Score = 124 (48.7 bits), Expect = 6.4e-08, Sum P(4) = 6.4e-08
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 547 DYGQLGSPGSTGKFPTR---IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
DY + ST KF + I+ + K + + GS H + ++Y+WG G NG+L
Sbjct: 412 DYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRL 471
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G G+ ++ P L++ LR+K++ V G++ + I
Sbjct: 472 GLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI 506
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 53/260 (20%), Positives = 108/260 (41%)
Query: 315 GQIFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
G ++ WG GK+G GV+ + P+ I+ +N I+ + G H+ +T + +LY
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN--KIYKCSLGNSHSLFLTNTNELYV 962
Query: 372 WGDGIHN-LGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
G + LGL + + + + P KV + I I G ++ ++ G ++ FG
Sbjct: 963 CGSNNNGRLGLFEKSKMVCNIVSVPTKVILH-NNIYIKDILAGNTYSIILSVDGFIYIFG 1021
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+ G+ G+ + S V + E+ V G + + K G + ++
Sbjct: 1022 EFIKGSNGNSNNMSCEV---ISLYNEITNVKYMNGKYEHVFFLTYDNKLFGIGNNKNCQI 1078
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
+ + +P+++ +K ++ I + H++T ++F+ G +
Sbjct: 1079 LCDNEKENNYI----KKPKLITYFLKENNKI-IESIFSFHNVTFIQFNNSEIFAWGYTNN 1133
Query: 549 GQL--GSPGSTG--KFPTRI 564
L G P + K PT+I
Sbjct: 1134 YHLCIGIPNNIKYLKHPTKI 1153
Score = 114 (45.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 478 SGSNGLSSKK---LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
+G N SS + L+ WG+ G++G G D + L K++ K + G+S ++
Sbjct: 894 NGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIYKCSLGNSHSLF 953
Query: 534 LTATGQVFSMGSADYGQLGSPGSTG------KFPTRIEGNIKHR--YIEDIACGSYHIAV 585
LT T +++ GS + G+LG + PT++ I H YI+DI G+ + +
Sbjct: 954 LTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKV---ILHNNIYIKDILAGNTYSII 1010
Query: 586 VSSKSEVYTWGKGANGQLGHGDN 608
+S +Y +G+ G G+ +N
Sbjct: 1011 LSVDGFIYIFGEFIKGSNGNSNN 1033
Score = 105 (42.0 bits), Expect = 9.8e-12, Sum P(3) = 9.8e-12
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 531 TIALTATGQVFSMGSADYGQLGSP--GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ L +G+V++ G G+LG+ KF I NI I IACG ++ VS
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSD 823
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
VY WGK QLG G ++ P V+ L + V ++ G + +A I
Sbjct: 824 VGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 98 (39.6 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV---VPLCVKVSDDISFCKVACGHSITIALTATGQ 539
L S K++T G G+LG+G+ + VP+ + + + K+ACG++ + ++ G
Sbjct: 768 LESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN-KIIKIACGYNYVLCVSDVGL 826
Query: 540 VFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
V+ G D QLG G F P ++ N+ + + +I G H A + +K
Sbjct: 827 VYGWGKNDKSQLGI-GVIKDFYEPVHVK-NLTN--VINIFAGYDHSACIINK 874
Score = 93 (37.8 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
P K+ + +I I CG HT AI + G L+++G FG +G+G + P +
Sbjct: 339 PMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 88 (36.0 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
IACG + + V+ G ++ WG+ +LG GV D P + N +N+ + G H+
Sbjct: 811 IACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEP--VHVKNLTNVINIFAGYDHS 868
Query: 361 CAVTLSGDLYTWGD--GIHNLGLLGQVSEISHW 391
+ L G+ G++N+ + V+ ++++
Sbjct: 869 ACII--NKLLDKGNTNGVNNVNNVNGVNGVNNY 899
Score = 87 (35.7 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 338 YP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
+P K++ + I ++CG+ HT A+ G LY+WG +N G +G
Sbjct: 338 FPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWG--YNNFGCIG 382
Score = 81 (33.6 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 291 ESTVVLDAQ-SIACGSKH-AVLVTKQGQIFSWGEGSGGKLGHG---VEADVSYPKLIDAL 345
++ +VL ++ I GS H +V + + G++++ G G+LG+G ++ P L++ +
Sbjct: 745 KNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN-I 803
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+ I +ACG + V+ G +Y WG
Sbjct: 804 CVNKIIKIACGYNYVLCVSDVGLVYGWG 831
Score = 77 (32.2 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
I+CG H + + G ++SWG + G +G+G +V P
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEP 392
Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 41/181 (22%), Positives = 76/181 (41%)
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
K+ID + ++ ++ G+ +T +G+L G+G NL + +P ++
Sbjct: 755 KIIDGSDHFSVFLLESGKVYTAGYNKNGEL---GNGEFNL-------KKKFGVPILLNIC 804
Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
+ +I I CG + ++ G ++ +G LG G P V+ L + +
Sbjct: 805 VN--KIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIF 862
Query: 460 ASCGVWHTAAIVEVA---GKTSGSNGL------------SSKK---LFTWGDGAEGQLGH 501
A G H+A I+ G T+G N + SS + L+ WG+ G++G
Sbjct: 863 A--GYDHSACIINKLLDKGNTNGVNNVNNVNGVNGVNNYSSDECGDLYIWGNAESGKVGL 920
Query: 502 G 502
G
Sbjct: 921 G 921
Score = 65 (27.9 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 301 IACGSKHAVLVT---KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACG 356
I+ G H V + IF+WG S +LG G+ V+ P ++ + + + C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 357 EFHTCAVT------LSGDLYTWGDGIHNLGLLG 383
+ T + + +Y++G G N GLLG
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKG--NNGLLG 112
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 300 SIACGSKHA--VLVTKQ----G-QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
SI C + +A VLV K G ++S+G+G+ G LG+ + ++ P ++ NI
Sbjct: 77 SICC-TNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKREL--PNFLEHEEKKNIQK 133
Query: 353 V 353
V
Sbjct: 134 V 134
Score = 40 (19.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 85 EKEYQSFSLIYRNRS-LDLICKDKDEAELWFT 115
EK+ + + IY+N+ L K+ D WFT
Sbjct: 306 EKKKEKMN-IYKNKEKLYSNIKENDNKHDWFT 336
Score = 38 (18.4 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 822 FEYSKQTNDNFNQEPDVLR 840
+ Y K+ NDN + + D+++
Sbjct: 624 YSYEKEINDN-DSDDDLIK 641
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 165 (63.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 43/162 (26%), Positives = 80/162 (49%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
+ GSKH++ G I+SWG G G+LG G + P+LI L I V G H+
Sbjct: 445 SAGSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSG 504
Query: 362 AVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
+ + ++YTWG+G + LG G +I + P+ V ++ + G +++ A+
Sbjct: 505 CIDSNYNVYTWGNGKFYKLGH-GN-DDIDIYYPKLVECLNHNKKVCMLSFGCFNSLALNV 562
Query: 421 AGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMAS 461
G ++ +G TF + + + +P+++ T + ++ AS
Sbjct: 563 KGDVYVWG--TFNITNNYVNYYISKLPKQINTNYKCISIHAS 602
Score = 159 (61.0 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALN-GSNIHMVACGEF 358
+ G+ H+ + +++WG G KLGHG + D+ YPKL++ LN + M++ G F
Sbjct: 496 VCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGCF 555
Query: 359 HTCAVTLSGDLYTWGD-GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS---ICCGPWH 414
++ A+ + GD+Y WG I N + +S++ P++++ + + I + +C G
Sbjct: 556 NSLALNVKGDVYVWGTFNITNNYVNYYISKL----PKQINTNYKCISIHASTYVCFG--- 608
Query: 415 TAAITSAGKLFTFGD 429
IT G L +FG+
Sbjct: 609 ---ITLVGDLISFGN 620
Score = 127 (49.8 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 36/116 (31%), Positives = 59/116 (50%)
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHR 571
K + + C HS+ A G ++S G G+LG G+ + P I+G ++++
Sbjct: 436 KKKNVVIHCSAGSKHSL--ACNLHGDIYSWGYGGNGRLGL-GNIKSYNKPQLIKG-LRNK 491
Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALR-DKQV 625
I + G+ H + S VYTWG G +LGHG+++ + P LVE L +K+V
Sbjct: 492 RILYVCAGTSHSGCIDSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKV 547
Score = 127 (49.8 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 49/218 (22%), Positives = 96/218 (44%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
G H+ A G ++++G G G LG G+ S + P+ ++ L+ + + G H+ I
Sbjct: 447 GSKHSLACNLHGDIYSWGYGGNGRLGLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI 506
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVK-VSDDISFCKVACGH 528
S+ ++TWG+G +LGHG+ + + P V+ ++ + C ++ G
Sbjct: 507 D------------SNYNVYTWGNGKFYKLGHGNDDIDIYYPKLVECLNHNKKVCMLSFGC 554
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++AL G V+ G+ + K P +I N K I +Y ++
Sbjct: 555 FNSLALNVKGDVYVWGTFNITNNYVNYYISKLPKQINTNYK---CISIHASTYVCFGITL 611
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
++ ++G N N+N L++ L +K+V+
Sbjct: 612 VGDLISFGNYKNYSYEKEINDNDSDDDLIKYLINKEVE 649
Score = 124 (48.7 bits), Expect = 6.4e-08, Sum P(4) = 6.4e-08
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 547 DYGQLGSPGSTGKFPTR---IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
DY + ST KF + I+ + K + + GS H + ++Y+WG G NG+L
Sbjct: 412 DYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIYSWGYGGNGRL 471
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G G+ ++ P L++ LR+K++ V G++ + I
Sbjct: 472 GLGNIKSYNKPQLIKGLRNKRILYVCAGTSHSGCI 506
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 53/260 (20%), Positives = 108/260 (41%)
Query: 315 GQIFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
G ++ WG GK+G GV+ + P+ I+ +N I+ + G H+ +T + +LY
Sbjct: 905 GDLYIWGNAESGKVGLGVDYTQGCILLPRKINIIN--KIYKCSLGNSHSLFLTNTNELYV 962
Query: 372 WGDGIHN-LGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
G + LGL + + + + P KV + I I G ++ ++ G ++ FG
Sbjct: 963 CGSNNNGRLGLFEKSKMVCNIVSVPTKVILH-NNIYIKDILAGNTYSIILSVDGFIYIFG 1021
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+ G+ G+ + S V + E+ V G + + K G + ++
Sbjct: 1022 EFIKGSNGNSNNMSCEV---ISLYNEITNVKYMNGKYEHVFFLTYDNKLFGIGNNKNCQI 1078
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
+ + +P+++ +K ++ I + H++T ++F+ G +
Sbjct: 1079 LCDNEKENNYI----KKPKLITYFLKENNKI-IESIFSFHNVTFIQFNNSEIFAWGYTNN 1133
Query: 549 GQL--GSPGSTG--KFPTRI 564
L G P + K PT+I
Sbjct: 1134 YHLCIGIPNNIKYLKHPTKI 1153
Score = 114 (45.2 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 478 SGSNGLSSKK---LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
+G N SS + L+ WG+ G++G G D + L K++ K + G+S ++
Sbjct: 894 NGVNNYSSDECGDLYIWGNAESGKVGLGVDYTQGCILLPRKINIINKIYKCSLGNSHSLF 953
Query: 534 LTATGQVFSMGSADYGQLGSPGSTG------KFPTRIEGNIKHR--YIEDIACGSYHIAV 585
LT T +++ GS + G+LG + PT++ I H YI+DI G+ + +
Sbjct: 954 LTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKV---ILHNNIYIKDILAGNTYSII 1010
Query: 586 VSSKSEVYTWGKGANGQLGHGDN 608
+S +Y +G+ G G+ +N
Sbjct: 1011 LSVDGFIYIFGEFIKGSNGNSNN 1033
Score = 105 (42.0 bits), Expect = 9.8e-12, Sum P(3) = 9.8e-12
Identities = 35/110 (31%), Positives = 53/110 (48%)
Query: 531 TIALTATGQVFSMGSADYGQLGSP--GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
++ L +G+V++ G G+LG+ KF I NI I IACG ++ VS
Sbjct: 764 SVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKIIKIACGYNYVLCVSD 823
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
VY WGK QLG G ++ P V+ L + V ++ G + +A I
Sbjct: 824 VGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTN--VINIFAGYDHSACI 871
Score = 98 (39.6 bits), Expect = 5.0e-11, Sum P(3) = 5.0e-11
Identities = 31/112 (27%), Positives = 56/112 (50%)
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV---VPLCVKVSDDISFCKVACGHSITIALTATGQ 539
L S K++T G G+LG+G+ + VP+ + + + K+ACG++ + ++ G
Sbjct: 768 LESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVN-KIIKIACGYNYVLCVSDVGL 826
Query: 540 VFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
V+ G D QLG G F P ++ N+ + + +I G H A + +K
Sbjct: 827 VYGWGKNDKSQLGI-GVIKDFYEPVHVK-NLTN--VINIFAGYDHSACIINK 874
Score = 93 (37.8 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
P K+ + +I I CG HT AI + G L+++G FG +G+G + P +
Sbjct: 339 PMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEPTPI 395
Score = 88 (36.0 bits), Expect = 9.2e-05, Sum P(3) = 9.2e-05
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
IACG + + V+ G ++ WG+ +LG GV D P + N +N+ + G H+
Sbjct: 811 IACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEP--VHVKNLTNVINIFAGYDHS 868
Query: 361 CAVTLSGDLYTWGD--GIHNLGLLGQVSEISHW 391
+ L G+ G++N+ + V+ ++++
Sbjct: 869 ACII--NKLLDKGNTNGVNNVNNVNGVNGVNNY 899
Score = 87 (35.7 bits), Expect = 5.5e-06, Sum P(3) = 5.5e-06
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 338 YP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
+P K++ + I ++CG+ HT A+ G LY+WG +N G +G
Sbjct: 338 FPMKIVFPKKNTKIKFISCGDMHTLAICTGGVLYSWG--YNNFGCIG 382
Score = 81 (33.6 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 24/88 (27%), Positives = 48/88 (54%)
Query: 291 ESTVVLDAQ-SIACGSKH-AVLVTKQGQIFSWGEGSGGKLGHG---VEADVSYPKLIDAL 345
++ +VL ++ I GS H +V + + G++++ G G+LG+G ++ P L++ +
Sbjct: 745 KNKLVLKSKVKIIDGSDHFSVFLLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLN-I 803
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+ I +ACG + V+ G +Y WG
Sbjct: 804 CVNKIIKIACGYNYVLCVSDVGLVYGWG 831
Score = 77 (32.2 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
I+CG H + + G ++SWG + G +G+G +V P
Sbjct: 354 ISCGDMHTLAICTGGVLYSWGYNNFGCIGNGTNQNVYEP 392
Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 41/181 (22%), Positives = 76/181 (41%)
Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
K+ID + ++ ++ G+ +T +G+L G+G NL + +P ++
Sbjct: 755 KIIDGSDHFSVFLLESGKVYTAGYNKNGEL---GNGEFNL-------KKKFGVPILLNIC 804
Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
+ +I I CG + ++ G ++ +G LG G P V+ L + +
Sbjct: 805 VN--KIIKIACGYNYVLCVSDVGLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIF 862
Query: 460 ASCGVWHTAAIVEVA---GKTSGSNGL------------SSKK---LFTWGDGAEGQLGH 501
A G H+A I+ G T+G N + SS + L+ WG+ G++G
Sbjct: 863 A--GYDHSACIINKLLDKGNTNGVNNVNNVNGVNGVNNYSSDECGDLYIWGNAESGKVGL 920
Query: 502 G 502
G
Sbjct: 921 G 921
Score = 65 (27.9 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 301 IACGSKHAVLVT---KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACG 356
I+ G H V + IF+WG S +LG G+ V+ P ++ + + + C
Sbjct: 22 ISTGLDHYACVAYYKNKPSIFTWGGNSCNQLGLGINNRFVNNPTVVCFFDSFIVASICCT 81
Query: 357 EFHTCAVT------LSGDLYTWGDGIHNLGLLG 383
+ T + + +Y++G G N GLLG
Sbjct: 82 NYATFVLVKKNVNDIGCSVYSFGKG--NNGLLG 112
Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(4) = 1.4e-06
Identities = 19/61 (31%), Positives = 32/61 (52%)
Query: 300 SIACGSKHA--VLVTKQ----G-QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
SI C + +A VLV K G ++S+G+G+ G LG+ + ++ P ++ NI
Sbjct: 77 SICC-TNYATFVLVKKNVNDIGCSVYSFGKGNNGLLGYKKKREL--PNFLEHEEKKNIQK 133
Query: 353 V 353
V
Sbjct: 134 V 134
Score = 40 (19.1 bits), Expect = 1.2e-12, Sum P(3) = 1.2e-12
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 85 EKEYQSFSLIYRNRS-LDLICKDKDEAELWFT 115
EK+ + + IY+N+ L K+ D WFT
Sbjct: 306 EKKKEKMN-IYKNKEKLYSNIKENDNKHDWFT 336
Score = 38 (18.4 bits), Expect = 3.2e-08, Sum P(4) = 3.2e-08
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 822 FEYSKQTNDNFNQEPDVLR 840
+ Y K+ NDN + + D+++
Sbjct: 624 YSYEKEINDN-DSDDDLIK 641
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 192 (72.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 75/271 (27%), Positives = 125/271 (46%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ ++ G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTDDGRVFLWG 144
Query: 429 D--GTFGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
G +G + S VP +V+ ++ V + G H + ++G
Sbjct: 145 SFRDNNGVIGLLEPMKKSMVPVQVQL--DVPVVKVASGNDHLVMLT--------ADG--- 191
Query: 486 KKLFTWGDGAEGQLGH--------GDA---EPRVVPLCVKVSD-----DISFCKVACGHS 529
L+T G G +GQLG G E +VP CV + + F CG
Sbjct: 192 -DLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAY 250
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKF 560
T A++ G V+ G ++Y QLG+PG+ F
Sbjct: 251 FTFAISHEGHVYGFGLSNYHQLGTPGTESCF 281
Score = 186 (70.5 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 83/274 (30%), Positives = 121/274 (44%)
Query: 359 HTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H T G + T G G + LGL V E P VS + +Q + G HT
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK--PALVSIPEDVVQAEA---GGMHTVC 81
Query: 418 ITSAGKLFTFGDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
++ +G++++FG GALG S VP +VE L+E K V S G HTAA+ +
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTD--- 136
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR---VVPLCVKVSDDISFCKVACGHSITI 532
+G ++F WG + G EP +VP V+V D+ KVA G+ +
Sbjct: 137 -----DG----RVFLWGSFRDNNGVIGLLEPMKKSMVP--VQVQLDVPVVKVASGNDHLV 185
Query: 533 ALTATGQVFSMGSADYGQLGS-P-------GSTGK----FPTRI----EGNIKHRYIEDI 576
LTA G ++++G + GQLG P G G P + G+ H +D
Sbjct: 186 MLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDA 245
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
CG+Y +S + VY +G QLG E+
Sbjct: 246 FCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTES 279
Score = 157 (60.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVS 337
+R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 56 ERKKPALVSIPEDVVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 110
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKV 396
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 111 VPGKVELQE--KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 168
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
Q++ + + + G H +T+ G L+T G G G LG
Sbjct: 169 --QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
>UNIPROTKB|E1BH40 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 CTD:23077 GO:GO:0021785 OMA:LLSILHW
EMBL:DAAA02033607 EMBL:DAAA02033608 EMBL:DAAA02033609
EMBL:DAAA02033610 IPI:IPI00705654 RefSeq:NP_001179746.1
UniGene:Bt.105085 Ensembl:ENSBTAT00000025100 GeneID:534496
KEGG:bta:534496 NextBio:20876421 Uniprot:E1BH40
Length = 4640
Score = 160 (61.4 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 49/128 (38%), Positives = 62/128 (48%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME--------NG---- 921
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S +V G + T AL GQVF+ GS
Sbjct: 922 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAALLMDGQVFTFGSF 980
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 981 SKGQLGRP 988
Score = 158 (60.7 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 35/97 (36%), Positives = 56/97 (57%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 876 GSGERGEKDASKITTYPPGSVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 934
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + V GSN TAA+ +
Sbjct: 935 GHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAALLM 970
Score = 151 (58.2 bits), Expect = 0.00031, Sum P(3) = 0.00031
Identities = 31/97 (31%), Positives = 56/97 (57%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA- 960
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT A+ + G ++T+G + G LG+ + ++ +W
Sbjct: 961 GSNHTAALLMDGQVFTFGS--FSKGQLGRPILDVPYW 995
Score = 127 (49.8 bits), Expect = 4.3e-06, Sum P(4) = 4.3e-06
Identities = 38/115 (33%), Positives = 56/115 (48%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+I+ + P V E L+ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 886 SKITTYPPGSVRFDCE-LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 944
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTAA+ L ++FT+G ++GQLG
Sbjct: 945 PTLVQALPGPST-QVTAGSNHTAAL------------LMDGQVFTFGSFSKGQLG 986
Score = 113 (44.8 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 32/115 (27%), Positives = 55/115 (47%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 933
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + + GS H A + +V+T+G + GQLG
Sbjct: 934 LGHGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAALLMDGQVFTFGSFSKGQLG 986
Score = 111 (44.1 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G IF G S G+ G ++ Y PK I + G + AC
Sbjct: 548 SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTAC 607
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 608 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLVT-----DLKGHFVTQVAMGKAH 654
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 655 TCVLMKNGEVWTFGVNNKGQCG 676
Score = 92 (37.4 bits), Expect = 2.0e-09, Sum P(4) = 2.0e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVTDLKGHFVTQVAMGKAHTC 656
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 657 VLMKNGEVWTFG--VNNKGQCGR 677
Score = 55 (24.4 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSL--NGKFQW 768
S + ++ + PR + GL + + + + RS D S+ +++ +L +G+
Sbjct: 2711 SRTTADQKKPRGTEGLSASESLMLKSDAAKLRS--DSHSRSLSPNHNTLQTLKSDGRMSS 2768
Query: 769 EPNSDFIKSNKISASP-PGSRRVSRA-PSPIS--RKSSPACSITMNSFTDLANSEVIFEY 824
++ S+SP P + +R+ PS S R SSP T +++
Sbjct: 2769 GFRAESPGPGSRSSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPR 2828
Query: 825 SKQTNDNFNQEPDVLRAQLEDLT 847
+ +D++ +PD LR + LT
Sbjct: 2829 ERSKSDSYTLDPDTLRKKKMPLT 2851
Score = 54 (24.1 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3394 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3451
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3452 ILPARVKAIPRR 3463
Score = 54 (24.1 bits), Expect = 9.8e-06, Sum P(4) = 9.8e-06
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 648 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 681
Score = 53 (23.7 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRS-----STSVPREVE 450
Q G++ G W IT + K+ F+ G DG+ L D S S S + E
Sbjct: 519 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGE 578
Query: 451 TLK---ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAE 505
+ K + K + IV +GS+ + SK +L+ +G A + D+
Sbjct: 579 STKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI----YSDSS 634
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V L K ++ +VA G + T L G+V++ G + GQ G
Sbjct: 635 SLVTDL--K-GHFVT--QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 38 (18.4 bits), Expect = 2.6e-11, Sum P(4) = 2.6e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 760 PSLNGKFQWEPNSDFIKSNKIS 781
P F E SD++K +K S
Sbjct: 2075 PGNEALFSLETASDYVKDDKAS 2096
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 217 (81.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 77/256 (30%), Positives = 119/256 (46%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T ++++WG+ + LGHG + +P+L+D + S +++ V C +FH+
Sbjct: 133 HVVFKDTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLC-KFHSVF 191
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + G S + HT +T G
Sbjct: 192 LSQKGQVYTCGHG--RGGRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTDDG 248
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVETLKELK--TVMA-SCGVWHTAAIVEVAGKTS 478
++TFG F LG +S +VPR+++ K LK T++ + G +HT A T
Sbjct: 249 CVYTFGLNMFHQLGIIPPPASCNVPRQIQA-KYLKGRTIIGVAAGRFHTVLWTREAVYTL 307
Query: 479 GSNGLSSKKLFTWGDGAEGQLGH---GDAEPRVV-PLCVKV--SDDISFCKVACGHSITI 532
G NG GQLGH + E V P V DI+ VA T+
Sbjct: 308 GLNG--------------GQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASDGATV 353
Query: 533 ALTATGQVFSMGSADY 548
+T G ++ + ADY
Sbjct: 354 CVTTRGDIYLL--ADY 367
Score = 215 (80.7 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 53/162 (32%), Positives = 91/162 (56%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V ++++GQ+++ G G GG+LGHG E P+L++ L+G N VA +
Sbjct: 181 QVVLC-KFHSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKD 239
Query: 359 HTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTA 416
HT +T G +YT+G + H LG++ + + +PR++ + ++G I + G +HT
Sbjct: 240 HTVVLTDDGCVYTFGLNMFHQLGIIPPPASCN--VPRQIQAKYLKGRTIIGVAAGRFHTV 297
Query: 417 AITSAGKLFTFG-DGTFGALGH-----GDRSSTSVPREVETL 452
T ++T G +G G LGH G++ T+ PR+V L
Sbjct: 298 LWTREA-VYTLGLNG--GQLGHLLDPNGEKCVTT-PRQVSAL 335
Score = 214 (80.4 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 75/231 (32%), Positives = 114/231 (49%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T +++T+GD T LGHG ++S P EL + + GV+ + +V
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSKHHP-------ELLDLFSRSGVY----VKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ + +VA T+ LT
Sbjct: 188 HSVFLSQKGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTDD 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P ++ P +I+ +K R I +A G +H V+ ++ VYT
Sbjct: 248 GCVYTFGLNMFHQLGIIPPPASCNVPRQIQAKYLKGRTIIGVAAGRFH-TVLWTREAVYT 306
Query: 595 WGKGANGQLGH--GDNENK--QTPTLVEALRDKQVK-SVVCGSNFTAAICL 640
G GQLGH N K TP V AL K + S+V S+ A +C+
Sbjct: 307 LGLNG-GQLGHLLDPNGEKCVTTPRQVSALHHKDIAVSLVAASD-GATVCV 355
Score = 42 (19.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 81 YPQPEKEYQSFSLIYRNRSLDLICKDKDEAELW 113
Y Q ++ L+ ++R ++ KD D E++
Sbjct: 113 YMQDKEGLSPLDLLMKDRPTHVVFKDTDPTEVY 145
>MGI|MGI:2179432 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015630 "microtubule cytoskeleton" evidence=IDA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IMP] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048667 "cell morphogenesis
involved in neuron differentiation" evidence=IMP] [GO:0051493
"regulation of cytoskeleton organization" evidence=IMP]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2179432
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0006355
GO:GO:0046872 GO:GO:0016874 GO:GO:0030424 GO:GO:0008270
GO:GO:0032880 GO:GO:0006351 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 CleanEx:MM_PAM
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 CTD:23077 eggNOG:NOG240798 HOVERGEN:HBG053153
OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GO:GO:0021785 EMBL:AY325887
EMBL:BC059257 IPI:IPI00380409 IPI:IPI00608114 RefSeq:NP_997098.2
UniGene:Mm.6478 PDB:3GBW PDB:3HWJ PDBsum:3GBW PDBsum:3HWJ
ProteinModelPortal:Q7TPH6 SMR:Q7TPH6 IntAct:Q7TPH6 STRING:Q7TPH6
PhosphoSite:Q7TPH6 PaxDb:Q7TPH6 PRIDE:Q7TPH6 DNASU:105689
GeneID:105689 KEGG:mmu:105689 UCSC:uc007uwl.1 HOGENOM:HOG000112908
InParanoid:Q7TPH6 EvolutionaryTrace:Q7TPH6 NextBio:357830
CleanEx:MM_MYCBP2 Genevestigator:Q7TPH6
GermOnline:ENSMUSG00000033004 Uniprot:Q7TPH6
Length = 4711
Score = 155 (59.6 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS D G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 876 GSGDRGEKDASKITTYPPGSVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 934
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + C SN TA + +
Sbjct: 935 GHGDVNSRGCPTLVQALPGPSTQVTAC-SNHTAVLLM 970
Score = 154 (59.3 bits), Expect = 9.1e-11, Sum P(4) = 9.1e-11
Identities = 48/128 (37%), Positives = 60/128 (46%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 875 DGS-GDRGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME--------NG---- 921
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S AC + T L GQVF+ GS
Sbjct: 922 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTACSNH-TAVLLMDGQVFTFGSF 980
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 981 SKGQLGRP 988
Score = 154 (59.3 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 31/97 (31%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + AC
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAC 961
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
HT + + G ++T+G + G LG+ + +I +W
Sbjct: 962 SN-HTAVLLMDGQVFTFGS--FSKGQLGRPILDIPYW 995
Score = 128 (50.1 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 37/115 (32%), Positives = 56/115 (48%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+I+ + P V E L+ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 886 SKITTYPPGSVRFDCE-LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 944
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + +C HTA + L ++FT+G ++GQLG
Sbjct: 945 PTLVQALPGPSTQVTACSN-HTAVL------------LMDGQVFTFGSFSKGQLG 986
Score = 115 (45.5 bits), Expect = 8.6e-07, Sum P(4) = 8.6e-07
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 875 DGS-GDRGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 933
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + AC S H AV+ +V+T+G + GQLG
Sbjct: 934 LGHGDVNSRGCPTLVQA-LPGPSTQVTAC-SNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 111 (44.1 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G +F G S G+ G ++ Y PK I + G + AC
Sbjct: 548 SVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTAC 607
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 608 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLV-----SDLKGHFVTQVAMGKAH 654
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 655 TCVLMKNGEVWTFGVNNKGQCG 676
Score = 93 (37.8 bits), Expect = 4.3e-09, Sum P(4) = 4.3e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVSDLKGHFVTQVAMGKAHTC 656
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 657 VLMKNGEVWTFG--VNNKGQCGR 677
Score = 59 (25.8 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 35/149 (23%), Positives = 65/149 (43%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEP 770
S + ++ + PR + GL + + + + RS D S+ +++ +L K
Sbjct: 2783 SRTPADQKKPRGTEGLSASESLMLKSDAAKLRS--DSHSRSLSPNHNTLQTL--KSDGRT 2838
Query: 771 NSDFIKSNKISASPPGSRRVSRAPSPI-SRKSSP--ACSITMNSFTDL---------ANS 818
+S F + + PGSR S P P+ + +SSP A S +S D A +
Sbjct: 2839 SSGF----RAESPGPGSRSSSPKPKPLPTPRSSPSGASSPRSSSPQDKNLPQKSTAPAKT 2894
Query: 819 EVIFEYSKQTNDNFNQEPDVLRAQLEDLT 847
++ + +D++ +PD LR + LT
Sbjct: 2895 KLDPPRERSKSDSYTLDPDTLRKKKMPLT 2923
Score = 54 (24.1 bits), Expect = 7.2e-11, Sum P(4) = 7.2e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3466 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3523
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3524 ILPARVKAIPRR 3535
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 648 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 681
Score = 51 (23.0 bits), Expect = 5.1e-05, Sum P(4) = 5.1e-05
Identities = 43/163 (26%), Positives = 64/163 (39%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRSS--TSVPREVETLK 453
Q G++ G W IT + K+ F+ G DG+ L D S T + E +
Sbjct: 519 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGE 578
Query: 454 ELKTVMASCGVWHTAAIVEVAGK----TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
K+ S + I+++ GK T+ +NG SS DG G DA
Sbjct: 579 STKSRRQS-KPYKPKKIIKMEGKIVVYTACNNGSSS---VISKDGELYMFGK-DAIYSDS 633
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V +VA G + T L G+V++ G + GQ G
Sbjct: 634 SSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 39 (18.8 bits), Expect = 7.2e-11, Sum P(4) = 7.2e-11
Identities = 15/53 (28%), Positives = 20/53 (37%)
Query: 731 KRVTEKENMNSRSATDGQSKPKG--KSYHASPSLNGKFQWEPNSDFIKSNKIS 781
K + EN+NS S G P F E SD++K +K S
Sbjct: 2041 KLTSVHENLNSWVELKKYSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKAS 2093
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 185 (70.2 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 85/337 (25%), Positives = 140/337 (41%)
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE-IS-HWIPR 394
S+P L + G + +A + +CA+ +G++Y WG N G+LG + I P
Sbjct: 157 SFPPLAE---GHKVVQLAATDNMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPW 213
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
KV I + G H + G +F +G+G LG R+V
Sbjct: 214 KVP-TFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLG----------RKVMERFR 262
Query: 455 LKTV-MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVV--- 509
LKT+ G+ H I +G+ KL +WG GQ G D E +
Sbjct: 263 LKTLDPRPFGLRHVKYIA--SGENHCFALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTK 320
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST----------GK 559
P + + D++ +A G ++ L+ G ++S G D ++G P GK
Sbjct: 321 PKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGK 380
Query: 560 -----FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK-QT 613
PT++ N+ + +A GS+H V+ Y+WG G +G G E+ +
Sbjct: 381 ARAVPLPTKLN-NVPK--FKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEV 437
Query: 614 PTLVE--ALRDKQVKSVVCGSNFTAAICLHKGVSIAD 648
PT ++ A +D + V CG F+ + GV ++D
Sbjct: 438 PTRIKNTATQDHNIILVGCGGQFSVS----GGVKLSD 470
Score = 147 (56.8 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 58/255 (22%), Positives = 108/255 (42%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVACGEFH 359
+A G H + + ++G +F+WG G +LG V L G ++ +A GE H
Sbjct: 226 LAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFGLRHVKYIASGENH 285
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI----PRKVSGQMEGLQISSICCGPWHT 415
A+T L +WG ++ G G ++ P++++ + + I SI G H+
Sbjct: 286 CFALTKDNKLVSWG--LNQFGQCGVSEDVEDGALVTKPKRLA-LPDNVVIRSIAAGEHHS 342
Query: 416 AAITSAGKLFTFGDGTFGALG--------------HGDRSSTSVPREVETLKELKTVMAS 461
++ G L++ G +G HG + +P ++ + + K+V A
Sbjct: 343 LILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAA- 401
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVK--VSDD 518
G H+ A+ + NG++ ++WG G +G G E VP +K + D
Sbjct: 402 -GSHHSVAVAQ--------NGIA----YSWGFGETYAVGLGPFEDDTEVPTRIKNTATQD 448
Query: 519 ISFCKVACGHSITIA 533
+ V CG +++
Sbjct: 449 HNIILVGCGGQFSVS 463
Score = 99 (39.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 36/154 (23%), Positives = 67/154 (43%)
Query: 493 DGAEGQLGHGDAEPRVVPL--CVKVSDDISFCKVACGHSITIALTATGQVFSMGS--ADY 548
D +G L ++ P +P +++ ++A +++ AL + G+V++ G+ +
Sbjct: 137 DDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVYAWGTFRCNE 196
Query: 549 GQLG---SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
G LG K P ++ K+ ++ +A G HI + + V+ WG G QLG
Sbjct: 197 GILGFYQDKIKIQKTPWKVPTFSKYNIVQ-LAPGKDHILFLDEEGMVFAWGNGQQNQLGR 255
Query: 606 GDNENKQTPTL-VEALRDKQVKSVVCGSNFTAAI 638
E + TL + VK + G N A+
Sbjct: 256 KVMERFRLKTLDPRPFGLRHVKYIASGENHCFAL 289
Score = 90 (36.7 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 28/84 (33%), Positives = 43/84 (51%)
Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSYPKLIDAL--NGSNIHMVACGEFHT 360
KH L + IF WG GS +LG G A +V P+L L + + I A G HT
Sbjct: 37 KHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHT 96
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQ 384
A+ ++++WG +++G LG+
Sbjct: 97 LALDEESNVWSWG--CNDVGALGR 118
Score = 61 (26.5 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 21/96 (21%), Positives = 36/96 (37%)
Query: 254 DVFIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
D+F W R + LP+ E+ ++ S A G H + + +
Sbjct: 47 DIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRD-EAKII----SFAVGGMHTLALDE 101
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
+ ++SWG G LG K +DA + S+
Sbjct: 102 ESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSD 137
>UNIPROTKB|F1PB36 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000008311 Uniprot:F1PB36
Length = 4640
Score = 156 (60.0 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 48/128 (37%), Positives = 61/128 (47%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME--------NG---- 921
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS
Sbjct: 922 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSF 980
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 981 SKGQLGRP 988
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 876 GSGERGEKDASKITTYPPGSVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 934
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + V GSN TA + +
Sbjct: 935 GHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 970
Score = 147 (56.8 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA- 960
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 961 GSNHTAVLLMDGQVFTFGS--FSKGQLGRPILDVPYW 995
Score = 123 (48.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+I+ + P V E L+ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 886 SKITTYPPGSVRFDCE-LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 944
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTA + L ++FT+G ++GQLG
Sbjct: 945 PTLVQALPGPST-QVTAGSNHTAVL------------LMDGQVFTFGSFSKGQLG 986
Score = 117 (46.2 bits), Expect = 6.4e-07, Sum P(4) = 6.4e-07
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 933
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 934 LGHGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 111 (44.1 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G IF G S G+ G ++ Y PK I + G + AC
Sbjct: 548 SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTAC 607
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 608 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLVT-----DLKGHFVTQVAMGKAH 654
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 655 TCVLMKNGEVWTFGVNNKGQCG 676
Score = 92 (37.4 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVTDLKGHFVTQVAMGKAHTC 656
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 657 VLMKNGEVWTFG--VNNKGQCGR 677
Score = 57 (25.1 bits), Expect = 2.3e-12, Sum P(3) = 2.3e-12
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSL--NGKFQW 768
S + ++ + PR + GL + + + + RS D S+ +++ +L +G+
Sbjct: 2711 SRTTADQKKPRGTEGLSASESLMLKSDAAKLRS--DSHSRSLSPNHNTLQTLKSDGRMSS 2768
Query: 769 EPNSDFIKSNKISASP-PGSRRVSRA-PSPIS--RKSSPACSITMNSFTDLANSEVIFEY 824
++ S+SP P + +R+ PS S R SSP T +++
Sbjct: 2769 SFRAESPGPGSRSSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPR 2828
Query: 825 SKQTNDNFNQEPDVLRAQLEDLT 847
+ +D++ +PD LR + LT
Sbjct: 2829 ERSKSDSYTLDPDTLRKKKMPLT 2851
Score = 54 (24.1 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3394 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3451
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3452 ILPARVKAIPRR 3463
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 648 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 681
Score = 53 (23.7 bits), Expect = 4.9e-05, Sum P(4) = 4.9e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRS-----STSVPREVE 450
Q G++ G W IT + K+ F+ G DG+ L D S S S + E
Sbjct: 519 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGE 578
Query: 451 TLK---ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAE 505
+ K + K + IV +GS+ + SK +L+ +G A + D+
Sbjct: 579 STKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI----YSDSS 634
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V L K ++ +VA G + T L G+V++ G + GQ G
Sbjct: 635 SLVTDL--K-GHFVT--QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 38 (18.4 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 760 PSLNGKFQWEPNSDFIKSNKIS 781
P F E SD++K +K S
Sbjct: 2075 PGNEALFSLETASDYVKDDKAS 2096
>UNIPROTKB|J9PB77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 PROSITE:PS00626 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AAEX03013255 EMBL:AAEX03013256 EMBL:AAEX03013257
Ensembl:ENSCAFT00000044597 Uniprot:J9PB77
Length = 4727
Score = 156 (60.0 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 48/128 (37%), Positives = 61/128 (47%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 913 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME--------NG---- 959
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS
Sbjct: 960 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSF 1018
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 1019 SKGQLGRP 1026
Score = 154 (59.3 bits), Expect = 1.2e-10, Sum P(4) = 1.2e-10
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 914 GSGERGEKDASKITTYPPGSVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 972
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + V GSN TA + +
Sbjct: 973 GHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 1008
Score = 147 (56.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA- 998
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 999 GSNHTAVLLMDGQVFTFGS--FSKGQLGRPILDVPYW 1033
Score = 123 (48.4 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+I+ + P V E L+ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 924 SKITTYPPGSVRFDCE-LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 982
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTA + L ++FT+G ++GQLG
Sbjct: 983 PTLVQALPGPST-QVTAGSNHTAVL------------LMDGQVFTFGSFSKGQLG 1024
Score = 117 (46.2 bits), Expect = 6.8e-07, Sum P(4) = 6.8e-07
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 913 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 971
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 972 LGHGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 111 (44.1 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G IF G S G+ G ++ Y PK I + G + AC
Sbjct: 586 SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTAC 645
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 646 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLVT-----DLKGHFVTQVAMGKAH 692
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 693 TCVLMKNGEVWTFGVNNKGQCG 714
Score = 92 (37.4 bits), Expect = 5.4e-09, Sum P(4) = 5.4e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 644 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVTDLKGHFVTQVAMGKAHTC 694
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 695 VLMKNGEVWTFG--VNNKGQCGR 715
Score = 57 (25.1 bits), Expect = 2.5e-12, Sum P(3) = 2.5e-12
Identities = 31/143 (21%), Positives = 62/143 (43%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSL--NGKFQW 768
S + ++ + PR + GL + + + + RS D S+ +++ +L +G+
Sbjct: 2801 SRTTADQKKPRGTEGLSASESLMLKSDAAKLRS--DSHSRSLSPNHNTLQTLKSDGRMSS 2858
Query: 769 EPNSDFIKSNKISASP-PGSRRVSRA-PSPIS--RKSSPACSITMNSFTDLANSEVIFEY 824
++ S+SP P + +R+ PS S R SSP T +++
Sbjct: 2859 SFRAESPGPGSRSSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPPR 2918
Query: 825 SKQTNDNFNQEPDVLRAQLEDLT 847
+ +D++ +PD LR + LT
Sbjct: 2919 ERSKSDSYTLDPDTLRKKKMPLT 2941
Score = 54 (24.1 bits), Expect = 7.2e-11, Sum P(4) = 7.2e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3484 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3541
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3542 ILPARVKAIPRR 3553
Score = 54 (24.1 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 686 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 719
Score = 53 (23.7 bits), Expect = 5.2e-05, Sum P(4) = 5.2e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRS-----STSVPREVE 450
Q G++ G W IT + K+ F+ G DG+ L D S S S + E
Sbjct: 557 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGE 616
Query: 451 TLK---ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAE 505
+ K + K + IV +GS+ + SK +L+ +G A + D+
Sbjct: 617 STKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI----YSDSS 672
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V L K ++ +VA G + T L G+V++ G + GQ G
Sbjct: 673 SLVTDL--K-GHFVT--QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 48 (22.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 35/171 (20%), Positives = 66/171 (38%)
Query: 373 GDGIHNLGLLGQVS-EISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
G + +L + QV + H W+ ++ G + I GP +T + K+ + D
Sbjct: 3869 GKAVEDLCRIKQVDLDSRHIGWVTSELPGGDNHI-IKIELKGPENTLRVRQV-KVLGWKD 3926
Query: 430 GTFGALGHGDRSSTSVPR--EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
G + +S + R E ETL+ + + + V+ ++G + K
Sbjct: 3927 GESTKIAGQISASVAQQRNCEAETLRVFRLITSQ--VFGKL----ISGDAEPTPEQEEKA 3980
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI-TIALTAT 537
L + +G E D + +V + S + K C H + I + AT
Sbjct: 3981 LLSSPEGEEKATSDADLKEHMVGIIFSRSKLTNLQKQVCAHIVQAIRMEAT 4031
Score = 38 (18.4 bits), Expect = 7.2e-11, Sum P(4) = 7.2e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 760 PSLNGKFQWEPNSDFIKSNKIS 781
P F E SD++K +K S
Sbjct: 2113 PGNEALFSLETASDYVKDDKAS 2134
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 198 (74.8 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 98/363 (26%), Positives = 146/363 (40%)
Query: 300 SIACGSKHAVLVTKQGQIFS-WGEG--SGGKLG-H--------GVE-----ADVSYPKLI 342
S ACG +L +K + WG G +LG H G E + VS P +
Sbjct: 111 SAACGYGFTLLSSKTADVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVSLP--L 168
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEI---SHWIPRKVSG 398
D + + V+CG H+ +T +++ G+ + G +EI SH + R
Sbjct: 169 DRPQETRVLQVSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQD- 227
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
+G Q+ + CG H+ +T G++++ G G G G G + TS P + L
Sbjct: 228 -FDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSSPTK------LGGD 279
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSD 517
+A V A + S GL F WG+ QL +V VP C+ S
Sbjct: 280 LAGVNVIQVATYGDCCLAVSADGGL-----FGWGNSEYLQLASVTDSTQVNVPRCLHFSG 334
Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGS-PGSTGK-----FPTRIEGNIKHR 571
+ ACG + L G VF G YG LG P P + G +
Sbjct: 335 VGKVRQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVESAVPEMIPPTLFGLTEFN 391
Query: 572 ---YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
+ I CG H A +++K E++ WGK G LG G E++ P V + + V V
Sbjct: 392 PEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV-TMPGEPV-DV 449
Query: 629 VCG 631
CG
Sbjct: 450 ACG 452
Score = 193 (73.0 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 78/302 (25%), Positives = 135/302 (44%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL--IDALNG--SNIHMVACG 356
++CG H++++T + +FS G S G+ G V + Y + + + + VACG
Sbjct: 179 VSCGRAHSLVLTDREGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQDFDGQVVQVACG 238
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
+ H+ +T G++Y+ G G LG + S P K+ G + G+ + +
Sbjct: 239 QDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSS--PTKLGGDLAGVNVIQVATYGDCCL 296
Query: 417 AITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
A+++ G LF +G+ + L D + +VPR + K A+CG A +
Sbjct: 297 AVSADGGLFGWGNSEYLQLASVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVL----- 351
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGH--GDAEPRVVPLCV----KVSDDISFCKVACGHS 529
NG +F WG G G+ + A P ++P + + + +I ++ CG S
Sbjct: 352 -----NG--EGHVFVWGYGILGKGPNLVESAVPEMIPPTLFGLTEFNPEIQVSRIRCGLS 404
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
ALT G++F G G LG + FP R+ + + D+ACG H+ V +
Sbjct: 405 HFAALTNKGELFVWGKNIRGCLGIGRLEDQYFPWRV--TMPGEPV-DVACGVDHM-VTLA 460
Query: 589 KS 590
KS
Sbjct: 461 KS 462
Score = 131 (51.2 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 41/152 (26%), Positives = 68/152 (44%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
S D +P+ L + V + ACG ++ +G +F WG G GK + VE+ V
Sbjct: 317 SVTDSTQVNVPRCLHFSGVGKVRQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVESAV 376
Query: 337 S--YPKLIDALNGSN----IHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEIS 389
P + L N + + CG H A+T G+L+ WG I LG+ G++ +
Sbjct: 377 PEMIPPTLFGLTEFNPEIQVSRIRCGLSHFAALTNKGELFVWGKNIRGCLGI-GRLED-- 433
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+ P +V+ M G + + CG H + +
Sbjct: 434 QYFPWRVT--MPGEPVD-VACGVDHMVTLAKS 462
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 219 (82.2 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 60/175 (34%), Positives = 96/175 (54%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V ++++GQ+++ G G GG+LGHG E P+L++ L+G N VA +
Sbjct: 181 QVVLC-KFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKD 239
Query: 359 HTCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTA 416
HT +T G +YT+G I H LGL+ S + +PR++ + ++G I + G +HT
Sbjct: 240 HTVVLTEDGCVYTFGLNIFHQLGLIPPPSSCN--VPRQMQAKYLKGRTIIGVAAGRFHTV 297
Query: 417 AITSAGKLFTFG--DGTFGAL--GHGDRSSTSVPREVETL--KE--LKTVMASCG 463
T ++T G G G L +G++ T+ PR+V L K+ L V AS G
Sbjct: 298 LWTREA-VYTMGLNGGQLGYLLDPNGEKCVTA-PRQVSALHHKDITLSLVAASDG 350
Score = 215 (80.7 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 77/253 (30%), Positives = 116/253 (45%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T +++WG+ + LGHG + +P+L+D + S I++ V C +FH+
Sbjct: 133 HVVFKNTDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVF 191
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + G S + HT +T G
Sbjct: 192 LSQKGQVYTCGHGPG--GRLGHGDEQTCLVPRLVEG-LSGHNCSQVAAAKDHTVVLTEDG 248
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVETLKELK--TVMA-SCGVWHTAAIVEVAGKTS 478
++TFG F LG SS +VPR+++ K LK T++ + G +HT A T
Sbjct: 249 CVYTFGLNIFHQLGLIPPPSSCNVPRQMQA-KYLKGRTIIGVAAGRFHTVLWTREAVYTM 307
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKV--SDDISFCKVACGHSITIALT 535
G NG G G L + E V P V DI+ VA T+ +T
Sbjct: 308 GLNG-----------GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASDGATVCVT 356
Query: 536 ATGQVFSMGSADY 548
G ++ + ADY
Sbjct: 357 TKGDIYLL--ADY 367
Score = 203 (76.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 73/231 (31%), Positives = 112/231 (48%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T ++T+GD T LGHG ++S P EL + + G++ I +V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHP-------ELVDLFSRSGIY----IKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ + +VA T+ LT
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGHNCSQVAAAKDHTVVLTED 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P S+ P +++ +K R I +A G +H V+ ++ VYT
Sbjct: 248 GCVYTFGLNIFHQLGLIPPPSSCNVPRQMQAKYLKGRTIIGVAAGRFH-TVLWTREAVYT 306
Query: 595 WGKGANGQLGH--GDNENK--QTPTLVEALRDKQVK-SVVCGSNFTAAICL 640
G GQLG+ N K P V AL K + S+V S+ A +C+
Sbjct: 307 MGLNG-GQLGYLLDPNGEKCVTAPRQVSALHHKDITLSLVAASD-GATVCV 355
Score = 38 (18.4 bits), Expect = 2.7e-12, Sum P(2) = 2.7e-12
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 791 SRAPSPISRKSSPACSITMNSFTDLANSE 819
S+ P P + +S S++ SF D E
Sbjct: 1183 SKIPKPANAWASSQHSVSSKSFRDFLVEE 1211
>UNIPROTKB|O75592 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015630 "microtubule cytoskeleton"
evidence=IEA] [GO:0021785 "branchiomotor neuron axon guidance"
evidence=IEA] [GO:0021952 "central nervous system projection neuron
axonogenesis" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0051493 "regulation of cytoskeleton organization" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
Prosite:PS00518 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0015630 GO:GO:0006355 GO:GO:0046872 GO:GO:0016874
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 GO:GO:0006351
GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 CleanEx:HS_PAM InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226
InterPro:IPR017868 EMBL:CH471093 PROSITE:PS50194 KO:K10693
PANTHER:PTHR12846 EMBL:AF075587 EMBL:AL159154 EMBL:AL159158
EMBL:AL359257 EMBL:AB020723 EMBL:BC037971 EMBL:AF083244
IPI:IPI00289776 IPI:IPI01014189 RefSeq:NP_055872.4
UniGene:Hs.591221 ProteinModelPortal:O75592 SMR:O75592
DIP:DIP-28142N IntAct:O75592 MINT:MINT-1632199 STRING:O75592
PhosphoSite:O75592 PaxDb:O75592 PRIDE:O75592
Ensembl:ENST00000357337 Ensembl:ENST00000544440 GeneID:23077
KEGG:hsa:23077 UCSC:uc010aev.3 CTD:23077 GeneCards:GC13M077618
HGNC:HGNC:23386 HPA:HPA039945 MIM:610392 neXtProt:NX_O75592
PharmGKB:PA134871126 eggNOG:NOG240798 HOVERGEN:HBG053153
InParanoid:O75592 OrthoDB:EOG4VQ9NB ChiTaRS:MYCBP2 GenomeRNAi:23077
NextBio:44191 ArrayExpress:O75592 Bgee:O75592 CleanEx:HS_MYCBP2
Genevestigator:O75592 GermOnline:ENSG00000005810 GO:GO:0021785
Uniprot:O75592
Length = 4640
Score = 156 (60.0 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 48/128 (37%), Positives = 61/128 (47%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME--------NG---- 921
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS
Sbjct: 922 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSF 980
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 981 SKGQLGRP 988
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 876 GSGERGEKDASKITTYPPGSVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 934
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + V GSN TA + +
Sbjct: 935 GHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 970
Score = 147 (56.8 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 902 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA- 960
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 961 GSNHTAVLLMDGQVFTFGS--FSKGQLGRPILDVPYW 995
Score = 123 (48.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+I+ + P V E L+ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 886 SKITTYPPGSVRFDCE-LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 944
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTA + L ++FT+G ++GQLG
Sbjct: 945 PTLVQALPGPST-QVTAGSNHTAVL------------LMDGQVFTFGSFSKGQLG 986
Score = 117 (46.2 bits), Expect = 6.4e-07, Sum P(4) = 6.4e-07
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 875 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 933
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 934 LGHGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 986
Score = 111 (44.1 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G IF G S G+ G ++ Y PK I + G + AC
Sbjct: 548 SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTAC 607
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 608 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLVT-----DLKGHFVTQVAMGKAH 654
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 655 TCVLMKNGEVWTFGVNNKGQCG 676
Score = 92 (37.4 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVTDLKGHFVTQVAMGKAHTC 656
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 657 VLMKNGEVWTFG--VNNKGQCGR 677
Score = 56 (24.8 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 30/144 (20%), Positives = 63/144 (43%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEP 770
S + ++ + PR + L + + + + RS D S+ +++ +L + P
Sbjct: 2711 SRTTADQKKPRGTESLSASESLILKSDAAKLRS--DSHSRSLSPNHNTLQTLKSDGRM-P 2767
Query: 771 NSDFIKS----NKISASPPGSRRVSRA-PSPIS--RKSSPACSITMNSFTDLANSEVIFE 823
+S +S +++S+ P + +R+ PS S R SSP T +++
Sbjct: 2768 SSSRAESPGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPP 2827
Query: 824 YSKQTNDNFNQEPDVLRAQLEDLT 847
+ +D++ +PD LR + LT
Sbjct: 2828 RERSKSDSYTLDPDTLRKKKMPLT 2851
Score = 54 (24.1 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3394 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3451
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3452 ILPARVKAIPRR 3463
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 648 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 681
Score = 53 (23.7 bits), Expect = 4.9e-05, Sum P(4) = 4.9e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRS-----STSVPREVE 450
Q G++ G W IT + K+ F+ G DG+ L D S S S + E
Sbjct: 519 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGE 578
Query: 451 TLK---ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAE 505
+ K + K + IV +GS+ + SK +L+ +G A + D+
Sbjct: 579 STKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI----YSDSS 634
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V L K ++ +VA G + T L G+V++ G + GQ G
Sbjct: 635 SLVTDL--K-GHFVT--QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 38 (18.4 bits), Expect = 6.7e-11, Sum P(4) = 6.7e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 760 PSLNGKFQWEPNSDFIKSNKIS 781
P F E SD++K +K S
Sbjct: 2075 PGNEALFSLETASDYVKDDKAS 2096
>UNIPROTKB|J3KPZ3 [details] [associations]
symbol:MYCBP2 "Probable E3 ubiquitin-protein ligase MYCBP2"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872 GO:GO:0008270
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR014756 InterPro:IPR013083
SUPFAM:SSF81296 InterPro:IPR008979 SUPFAM:SSF49785 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 EMBL:AC001226 InterPro:IPR017868
PROSITE:PS50194 KO:K10693 PANTHER:PTHR12846 EMBL:AL159154
EMBL:AL159158 EMBL:AL359257 RefSeq:NP_055872.4 UniGene:Hs.591221
GeneID:23077 KEGG:hsa:23077 CTD:23077 HGNC:HGNC:23386
ChiTaRS:MYCBP2 OMA:LLSILHW ProteinModelPortal:J3KPZ3
Ensembl:ENST00000407578 Uniprot:J3KPZ3
Length = 4678
Score = 156 (60.0 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 48/128 (37%), Positives = 61/128 (47%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 913 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME--------NG---- 959
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS
Sbjct: 960 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSF 1018
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 1019 SKGQLGRP 1026
Score = 154 (59.3 bits), Expect = 1.1e-10, Sum P(4) = 1.1e-10
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 914 GSGERGEKDASKITTYPPGSVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 972
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + V GSN TA + +
Sbjct: 973 GHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 1008
Score = 147 (56.8 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 940 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA- 998
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 999 GSNHTAVLLMDGQVFTFGS--FSKGQLGRPILDVPYW 1033
Score = 123 (48.4 bits), Expect = 1.1e-05, Sum P(4) = 1.1e-05
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+I+ + P V E L+ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 924 SKITTYPPGSVRFDCE-LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 982
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTA + L ++FT+G ++GQLG
Sbjct: 983 PTLVQALPGPST-QVTAGSNHTAVL------------LMDGQVFTFGSFSKGQLG 1024
Score = 117 (46.2 bits), Expect = 6.6e-07, Sum P(4) = 6.6e-07
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 913 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 971
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 972 LGHGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1024
Score = 111 (44.1 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G IF G S G+ G ++ Y PK I + G + AC
Sbjct: 586 SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTAC 645
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 646 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLVT-----DLKGHFVTQVAMGKAH 692
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 693 TCVLMKNGEVWTFGVNNKGQCG 714
Score = 92 (37.4 bits), Expect = 5.2e-09, Sum P(4) = 5.2e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 644 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVTDLKGHFVTQVAMGKAHTC 694
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 695 VLMKNGEVWTFG--VNNKGQCGR 715
Score = 56 (24.8 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 30/144 (20%), Positives = 63/144 (43%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEP 770
S + ++ + PR + L + + + + RS D S+ +++ +L + P
Sbjct: 2749 SRTTADQKKPRGTESLSASESLILKSDAAKLRS--DSHSRSLSPNHNTLQTLKSDGRM-P 2805
Query: 771 NSDFIKS----NKISASPPGSRRVSRA-PSPIS--RKSSPACSITMNSFTDLANSEVIFE 823
+S +S +++S+ P + +R+ PS S R SSP T +++
Sbjct: 2806 SSSRAESPGPGSRLSSPKPKTLPANRSSPSGASSPRSSSPHDKNLPQKSTAPVKTKLDPP 2865
Query: 824 YSKQTNDNFNQEPDVLRAQLEDLT 847
+ +D++ +PD LR + LT
Sbjct: 2866 RERSKSDSYTLDPDTLRKKKMPLT 2889
Score = 54 (24.1 bits), Expect = 6.9e-11, Sum P(4) = 6.9e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3432 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3489
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3490 ILPARVKAIPRR 3501
Score = 54 (24.1 bits), Expect = 2.5e-05, Sum P(4) = 2.5e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 686 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 719
Score = 53 (23.7 bits), Expect = 5.0e-05, Sum P(4) = 5.0e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRS-----STSVPREVE 450
Q G++ G W IT + K+ F+ G DG+ L D S S S + E
Sbjct: 557 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGE 616
Query: 451 TLK---ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAE 505
+ K + K + IV +GS+ + SK +L+ +G A + D+
Sbjct: 617 STKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI----YSDSS 672
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V L K ++ +VA G + T L G+V++ G + GQ G
Sbjct: 673 SLVTDL--K-GHFVT--QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 714
Score = 38 (18.4 bits), Expect = 6.9e-11, Sum P(4) = 6.9e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 760 PSLNGKFQWEPNSDFIKSNKIS 781
P F E SD++K +K S
Sbjct: 2113 PGNEALFSLETASDYVKDDKAS 2134
>ZFIN|ZDB-GENE-030616-132 [details] [associations]
symbol:mycbp2 "MYC binding protein 2" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0021986 "habenula
development" evidence=IMP] [GO:0016198 "axon choice point
recognition" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0042068 "regulation of pteridine
metabolic process" evidence=IMP] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-030616-132
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0046872
GO:GO:0008270 GO:GO:0016198 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284 GO:GO:0031290
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021986 EMBL:BX510646 EMBL:AL840634 EMBL:CR628366
EMBL:CU138551 IPI:IPI00993071 Ensembl:ENSDART00000124901
ArrayExpress:F1QI76 Bgee:F1QI76 GO:GO:0042068 Uniprot:F1QI76
Length = 4648
Score = 155 (59.6 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS++ G + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 899 GSSERGDKDASKITTYPPGAVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 957
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ +PTLV+AL + V GSN TA + +
Sbjct: 958 GHGDVNSRGSPTLVQALPGPSTQ-VTAGSNHTAVLLM 993
Score = 150 (57.9 bits), Expect = 1.6e-11, Sum P(3) = 1.6e-11
Identities = 44/126 (34%), Positives = 60/126 (47%)
Query: 433 GALGHGDRSSTSV----PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
G+ GD+ ++ + P V EL+ V SCG H+ ++E NG +
Sbjct: 899 GSSERGDKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVVLME--------NG----DV 946
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
+T+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS
Sbjct: 947 YTFGYGQHGQLGHGDVNSRGSPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSFSK 1005
Query: 549 GQLGSP 554
GQLG P
Sbjct: 1006 GQLGRP 1011
Score = 145 (56.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 925 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGSPTLVQALPGPSTQVTA- 983
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 984 GSNHTAVLLMDGQVFTFGS--FSKGQLGRPILDMPYW 1018
Score = 117 (46.2 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 43/165 (26%), Positives = 72/165 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G +F G S G+ G ++ Y PK + L AC
Sbjct: 577 SVGHDGSHALLVAEDGSVFFTGSASKGEDGESTKSRRQPKPYKPKKMIKLETKMAVYTAC 636
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ VT G+LY +G D I++ QVS++ +G ++ + G H
Sbjct: 637 NNGSSSIVTKDGELYMFGKDAIYSDSTC-QVSDL------------KGHFVTQVAMGKAH 683
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
T +T +G+++TFG G G D + S + ++ + T M
Sbjct: 684 TCVLTKSGEVWTFGVNNKGQCGR-DTGAMSQAGKAFGVENMATAM 727
Score = 113 (44.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 34/116 (29%), Positives = 56/116 (48%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ + G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 898 DGSS-ERGDKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 956
Query: 551 LG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG S G PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 957 LGHGDVNSRGS-PTLVQA-LPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 1009
Score = 54 (24.1 bits), Expect = 1.0e-05, Sum P(3) = 1.0e-05
Identities = 50/216 (23%), Positives = 87/216 (40%)
Query: 297 DAQSIACGSKHAVLVTKQGQIF------SWGEGSGG-KLGHGVEADVSY-PKLIDALNGS 348
+A I G + A++ T G+I+ S G GG G VE V+ PK++ G
Sbjct: 521 EAALIGAGREFALMKTASGKIYYTGKYQSLGIKQGGPSSGKWVELPVTKSPKIVQFSVGH 580
Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH----WIPRKVSGQMEGLQ 404
+ G H V G ++ G + G G+ ++ + P+K+ ++E
Sbjct: 581 D------GS-HALLVAEDGSVFFTGSA--SKGEDGESTKSRRQPKPYKPKKMI-KLETKM 630
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
C ++ +T G+L+ FG + D ST +V LK + G
Sbjct: 631 AVYTACNNGSSSIVTKDGELYMFGKDAI----YSD--STC---QVSDLKGHFVTQVAMGK 681
Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
HT + + +G+ + G+++K GA Q G
Sbjct: 682 AHTCVLTK-SGEV-WTFGVNNKGQCGRDTGAMSQAG 715
Score = 49 (22.3 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 23/84 (27%), Positives = 41/84 (48%)
Query: 732 RVTEKENMNSRSATDGQSKPKGKSYHASPSL-----NGKFQWE-------PNSDFIKSNK 779
R ++ ++ ++RS +SK +S AS +L GK + + PN + +++ K
Sbjct: 2718 RSSKTDSHSNRSVDQVKSK-NNESLSASEALILKSDTGKLRSDSHSRSHSPNHNTLQALK 2776
Query: 780 ISASPPGSRRVSRAPSPISRKSSP 803
G R + +P+P SR SSP
Sbjct: 2777 ADGRTSGLR--AESPNPGSRSSSP 2798
Score = 47 (21.6 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
Identities = 35/145 (24%), Positives = 69/145 (47%)
Query: 708 NTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQ 767
++ ++S SN + + S +N + ++ E + +S T G+ + S SP+ N Q
Sbjct: 2719 SSKTDSHSNRSVDQVKS---KNNESLSASEALILKSDT-GKLRSDSHSRSHSPNHN-TLQ 2773
Query: 768 WEPNSDFIKSNKISASP-PGSRRVS-RAPSPISRKSSPACSITMNSFTD--------LAN 817
+D S + SP PGSR S + + S +SSP+ + + S + ++
Sbjct: 2774 -ALKADGRTSGLRAESPNPGSRSSSPKQKTFTSGRSSPSSTSSPRSSSPHDKNLPAKVSP 2832
Query: 818 SEVIFEYSKQTN--DNFNQEPDVLR 840
S+V + ++ + D++ +PD LR
Sbjct: 2833 SKVHLDPPRERSKSDSYTLDPDTLR 2857
Score = 39 (18.8 bits), Expect = 4.9e-11, Sum P(3) = 4.9e-11
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 670 NCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLN 708
+C V+ C+ + L P I + C C K+N
Sbjct: 4415 DCSHVFHLQCTRRVLENRWLGPRITFGFMSCPICKNKIN 4453
Score = 37 (18.1 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 733 VTEKENMNSRSATDGQS 749
++ KEN NS+ + D S
Sbjct: 3962 ISSKENANSQPSDDDAS 3978
Score = 37 (18.1 bits), Expect = 7.8e-11, Sum P(3) = 7.8e-11
Identities = 8/22 (36%), Positives = 10/22 (45%)
Query: 760 PSLNGKFQWEPNSDFIKSNKIS 781
P F E SD++K K S
Sbjct: 2099 PGNEALFSLETASDYVKDEKAS 2120
>UNIPROTKB|F1NZF2 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0021785
"branchiomotor neuron axon guidance" evidence=IEA] [GO:0021952
"central nervous system projection neuron axonogenesis"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0032880
"regulation of protein localization" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0051493
"regulation of cytoskeleton organization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS50012
InterPro:IPR004939 PROSITE:PS51284 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194
GeneTree:ENSGT00390000011403 PANTHER:PTHR12846 OMA:LLSILHW
EMBL:AC149787 EMBL:AADN02042674 IPI:IPI00599046
Ensembl:ENSGALT00000027346 Uniprot:F1NZF2
Length = 4580
Score = 153 (58.9 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 48/128 (37%), Positives = 61/128 (47%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 813 DGS-GERGEKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVILME--------NG---- 859
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS
Sbjct: 860 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAILLMDGQVFTFGSF 918
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 919 SKGQLGRP 926
Score = 152 (58.6 bits), Expect = 1.0e-10, Sum P(4) = 1.0e-10
Identities = 33/97 (34%), Positives = 55/97 (56%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS + G+ + T P + + + R ++ ++CG +H ++ +VYT+G G +GQL
Sbjct: 814 GSGERGEKDASKITTYPPGAVRFDCELRAVQ-VSCGFHHSVILMENGDVYTFGYGQHGQL 872
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + V GSN TA + +
Sbjct: 873 GHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAILLM 908
Score = 145 (56.1 bits), Expect = 0.00077, Sum P(3) = 0.00077
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 840 LRAVQVSCGFHHSVILMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA- 898
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 899 GSNHTAILLMDGQVFTFGS--FSKGQLGRPILDMPYW 933
Score = 116 (45.9 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 32/115 (27%), Positives = 56/115 (48%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 813 DGS-GERGEKDASKITTYPPGAVRFDCELRAVQVSCGFHHSVILMENGDVYTFGYGQHGQ 871
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + + GS H A++ +V+T+G + GQLG
Sbjct: 872 LGHGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAILLMDGQVFTFGSFSKGQLG 924
Score = 111 (44.1 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 44/163 (26%), Positives = 72/163 (44%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLI 342
PK+++ +V D GS HA+LV G IF G S G+ G ++ Y PK I
Sbjct: 480 PKIIQFSVGHD------GS-HALLVADDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKI 532
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQME 401
+ G + AC + ++ G+LY +G D I++ S ++ ++
Sbjct: 533 IKMEGKIVISTACNNGSSSVISKDGELYMFGKDAIYS----DSTSLVT---------DLK 579
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
G ++ + G HT + G+++TFG G G D S S
Sbjct: 580 GHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCGR-DTGSMS 621
Score = 56 (24.8 bits), Expect = 5.8e-12, Sum P(3) = 5.8e-12
Identities = 26/140 (18%), Positives = 60/140 (42%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSL--NGKFQW 768
+ + ++ + PRN+ GL + + + + RS D S+ +++ +L +G+
Sbjct: 2655 NRAAADQKKPRNTDGLSASESLLLKSDAAKLRS--DSHSRSLSPNHNTLQTLKTDGRTTT 2712
Query: 769 EPNSDFIKSNKISASPPGSRRVS-RAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQ 827
++ S+SP + R+ + R SSP + + +++ +
Sbjct: 2713 GLRAESPGPGTRSSSPKTKTLTAVRSGASSPRSSSPHDKMVPQKASSPVKTKLDPPRERS 2772
Query: 828 TNDNFNQEPDVLRAQLEDLT 847
+D++ +PD LR + LT
Sbjct: 2773 KSDSYTLDPDTLRKKKVPLT 2792
Score = 56 (24.8 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 51/215 (23%), Positives = 79/215 (36%)
Query: 359 HTCAVTL---SGDLYTWGDGI-HNLGLLGQVSEISHWIPRKVSG--------QMEGLQIS 406
H C ++L DL+ G +LG E + + + SG Q G++
Sbjct: 407 HACGISLFDLEKDLHIISTGFDEESAVLGAGREFA--LMKTASGKIYYTGKYQSLGIKQG 464
Query: 407 SICCGPWHTAAITSAGKLFTFG---DGTFGALGHGDRSS--TSVPREVETLKELKTVMAS 461
G W IT + K+ F DG+ L D S T + E + K+ S
Sbjct: 465 GPSAGKWVELPITKSPKIIQFSVGHDGSHALLVADDGSIFFTGSASKGEDGESTKSRRQS 524
Query: 462 CGVWHTAAIVEVAGK----TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
+ I+++ GK T+ +NG SS DG G L +
Sbjct: 525 -KPYKPKKIIKMEGKIVISTACNNGSSS---VISKDGELYMFGKDAIYSDSTSLVTDLKG 580
Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
+VA G + T L G+V++ G + GQ G
Sbjct: 581 HF-VTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 614
Score = 54 (24.1 bits), Expect = 8.2e-11, Sum P(4) = 8.2e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3334 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3391
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3392 ILPARVKAIPRR 3403
Score = 41 (19.5 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 670 NCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTT 710
+C V+ C + L P I + C C K+N T
Sbjct: 4347 DCSHVFHLQCCQRVLENRWLGPRITFGFMSCPICKNKINHT 4387
Score = 40 (19.1 bits), Expect = 8.2e-11, Sum P(4) = 8.2e-11
Identities = 18/59 (30%), Positives = 23/59 (38%)
Query: 705 IKLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLN 763
I L T + N P S G +C + +KEN T + K K K A P N
Sbjct: 3072 ISLATIKAASQNMIFP--SPG---SCAVLKKKENDKDNKKTKKEKKKKEK-VEARPRGN 3124
>UNIPROTKB|D4A2D3 [details] [associations]
symbol:Mycbp2 "Protein Mycbp2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10
InterPro:IPR014756 InterPro:IPR013083 SUPFAM:SSF81296
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
OrthoDB:EOG4VQ9NB GO:GO:0021785 IPI:IPI00765932
ProteinModelPortal:D4A2D3 Ensembl:ENSRNOT00000014583
ArrayExpress:D4A2D3 Uniprot:D4A2D3
Length = 4715
Score = 150 (57.9 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 45/124 (36%), Positives = 58/124 (46%)
Query: 433 GALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G G D S +T P V E++ V SCG H+ ++E NG ++T
Sbjct: 878 GERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLME--------NG----DVYT 925
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS GQ
Sbjct: 926 FGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLVMDGQVFTFGSFSKGQ 984
Query: 551 LGSP 554
LG P
Sbjct: 985 LGRP 988
Score = 148 (57.2 bits), Expect = 3.8e-10, Sum P(4) = 3.8e-10
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
S + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQLG
Sbjct: 877 SGERGEKDASKVTTYPPGSVRFDCEVRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLG 935
Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
HGD ++ PTLV+AL + V GSN TA + +
Sbjct: 936 HGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLVM 970
Score = 146 (56.5 bits), Expect = 0.00083, Sum P(3) = 0.00083
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A G
Sbjct: 904 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA-GS 962
Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 963 NHTAVLVMDGQVFTFGS--FSKGQLGRPILDVPYW 995
Score = 121 (47.7 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+++ + P V E ++ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 886 SKVTTYPPGSVRFDCE-VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 944
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTA +V +G ++FT+G ++GQLG
Sbjct: 945 PTLVQALPGPST-QVTAGSNHTAVLV--------MDG----QVFTFGSFSKGQLG 986
Score = 118 (46.6 bits), Expect = 4.3e-07, Sum P(4) = 4.3e-07
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 495 AEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
A G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQLG
Sbjct: 876 ASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLG 935
Query: 553 SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
+ PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 936 HGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAVLVMDGQVFTFGSFSKGQLG 986
Score = 111 (44.1 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G +F G S G+ G ++ Y PK I + G + AC
Sbjct: 548 SVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTAC 607
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 608 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLV-----SDLKGHFVTQVAMGKAH 654
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 655 TCVLMKNGEVWTFGVNNKGQCG 676
Score = 93 (37.8 bits), Expect = 1.4e-08, Sum P(4) = 1.4e-08
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 606 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVSDLKGHFVTQVAMGKAHTC 656
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 657 VLMKNGEVWTFG--VNNKGQCGR 677
Score = 59 (25.8 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 711 SESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSL--NGKFQW 768
S + ++ + PR + GL + + + + RS D S+ +++ +L +G+
Sbjct: 2786 SRTTADQKKPRGTEGLSASESLMLKSDAAKLRS--DSHSRSLSPNHNTLQTLKSDGRVSS 2843
Query: 769 EPNSDFIKSNKISASP-PGSRRVSRA-PSPIS--RKSSPACSITMNSFTDLANSEVIFEY 824
++ S+SP P + R+ PS S R SSP T A +++
Sbjct: 2844 SFRAESPGPGSRSSSPKPKTLPTPRSSPSGASSPRSSSPQDKNLPQKSTAPAKTKLDPPR 2903
Query: 825 SKQTNDNFNQEPDVLRAQLEDLT 847
+ +D++ +PD LR + LT
Sbjct: 2904 ERSKSDSYTLDPDTLRKKKMPLT 2926
Score = 54 (24.1 bits), Expect = 2.4e-10, Sum P(4) = 2.4e-10
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3469 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3526
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3527 ILPARVKAIPRR 3538
Score = 54 (24.1 bits), Expect = 8.3e-05, Sum P(4) = 8.3e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 648 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 681
Score = 51 (23.0 bits), Expect = 0.00025, Sum P(4) = 0.00025
Identities = 43/163 (26%), Positives = 64/163 (39%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRSS--TSVPREVETLK 453
Q G++ G W IT + K+ F+ G DG+ L D S T + E +
Sbjct: 519 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGE 578
Query: 454 ELKTVMASCGVWHTAAIVEVAGK----TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
K+ S + I+++ GK T+ +NG SS DG G DA
Sbjct: 579 SAKSRRQS-KPYKPKKIIKMEGKIVVCTACNNGSSS---VISKDGELYMFGK-DAIYSDS 633
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V +VA G + T L G+V++ G + GQ G
Sbjct: 634 SSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 676
Score = 39 (18.8 bits), Expect = 2.4e-10, Sum P(4) = 2.4e-10
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 732 RVTEK-ENMNSRSATDGQSKPKG--KSYHASPSLNGKFQWEPNSDFIKSNKIS 781
+VT EN+NS S G P F E SD++K +K S
Sbjct: 2041 KVTSAHENLNSWIELKKYSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKAS 2093
Score = 37 (18.1 bits), Expect = 3.7e-10, Sum P(4) = 3.7e-10
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 552 GSPGSTGKFPTR--IEGNIKHRYIE 574
GSPGS + P+ ++ N+ +E
Sbjct: 2947 GSPGSENRAPSPHVVQENLHSEVVE 2971
>UNIPROTKB|F1RP77 [details] [associations]
symbol:MYCBP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051493 "regulation of cytoskeleton organization"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0021952 "central
nervous system projection neuron axonogenesis" evidence=IEA]
[GO:0021785 "branchiomotor neuron axon guidance" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR027047 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0015630 GO:GO:0046872 GO:GO:0030424
GO:GO:0008270 GO:GO:0032880 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0021952 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0051493 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
InterPro:IPR012983 Pfam:PF08005 InterPro:IPR017868 Pfam:PF00630
PROSITE:PS50194 GeneTree:ENSGT00390000011403 PANTHER:PTHR12846
GO:GO:0021785 OMA:LLSILHW EMBL:CU457401 EMBL:CT978653 EMBL:CU041349
Ensembl:ENSSSCT00000010386 Uniprot:F1RP77
Length = 4460
Score = 156 (60.0 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 48/128 (37%), Positives = 61/128 (47%)
Query: 429 DGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
DG+ G G D S +T P V EL+ V SCG H+ ++E NG
Sbjct: 788 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLME--------NG---- 834
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
++T+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS
Sbjct: 835 DVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLLMDGQVFTFGSF 893
Query: 547 DYGQLGSP 554
GQLG P
Sbjct: 894 SKGQLGRP 901
Score = 154 (59.3 bits), Expect = 9.3e-11, Sum P(4) = 9.3e-11
Identities = 34/97 (35%), Positives = 55/97 (56%)
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
GS + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQL
Sbjct: 789 GSGERGEKDASKITTYPPGSVRFDCELRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQL 847
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHGD ++ PTLV+AL + V GSN TA + +
Sbjct: 848 GHGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLLM 883
Score = 147 (56.8 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 30/97 (30%), Positives = 55/97 (56%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A
Sbjct: 815 LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA- 873
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
G HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 874 GSNHTAVLLMDGQVFTFGS--FSKGQLGRPILDVPYW 908
Score = 123 (48.4 bits), Expect = 9.4e-06, Sum P(4) = 9.4e-06
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+I+ + P V E L+ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 799 SKITTYPPGSVRFDCE-LRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 857
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTA + L ++FT+G ++GQLG
Sbjct: 858 PTLVQALPGPST-QVTAGSNHTAVL------------LMDGQVFTFGSFSKGQLG 899
Score = 117 (46.2 bits), Expect = 5.5e-07, Sum P(4) = 5.5e-07
Identities = 33/115 (28%), Positives = 56/115 (48%)
Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
DG+ G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQ
Sbjct: 788 DGS-GERGEKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQ 846
Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
LG + PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 847 LGHGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAVLLMDGQVFTFGSFSKGQLG 899
Score = 111 (44.1 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 37/142 (26%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G IF G S G+ G ++ Y PK I + G + AC
Sbjct: 461 SVGHDGSHALLVAEDGSIFFTGSASKGEDGESTKSRRQSKPYKPKKIIKMEGKIVVYTAC 520
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 521 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLVT-----DLKGHFVTQVAMGKAH 567
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 568 TCVLMKNGEVWTFGVNNKGQCG 589
Score = 92 (37.4 bits), Expect = 4.3e-09, Sum P(4) = 4.3e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 519 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVTDLKGHFVTQVAMGKAHTC 569
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 570 VLMKNGEVWTFG--VNNKGQCGR 590
Score = 54 (24.1 bits), Expect = 5.7e-11, Sum P(4) = 5.7e-11
Identities = 17/72 (23%), Positives = 36/72 (50%)
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE--YSKQTNDNFNQEPD 837
IS +P S V P + P+ + + TDLA +F+ YS ++ ++++
Sbjct: 3307 ISVTPDASPNVFEEPESNMKSMPPSLETSPITDTDLAK-RTVFQRSYSVVASE-YDKQHS 3364
Query: 838 VLRAQLEDLTRK 849
+L A+++ + R+
Sbjct: 3365 ILPARVKAIPRR 3376
Score = 54 (24.1 bits), Expect = 2.1e-05, Sum P(4) = 2.1e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 561 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 594
Score = 53 (23.7 bits), Expect = 4.2e-05, Sum P(4) = 4.2e-05
Identities = 43/167 (25%), Positives = 69/167 (41%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRS-----STSVPREVE 450
Q G++ G W IT + K+ F+ G DG+ L D S S S + E
Sbjct: 432 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSIFFTGSASKGEDGE 491
Query: 451 TLK---ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAE 505
+ K + K + IV +GS+ + SK +L+ +G A + D+
Sbjct: 492 STKSRRQSKPYKPKKIIKMEGKIVVYTACNNGSSSVISKDGELYMFGKDAI----YSDSS 547
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V L K ++ +VA G + T L G+V++ G + GQ G
Sbjct: 548 SLVTDL--K-GHFVT--QVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 589
Score = 52 (23.4 bits), Expect = 6.7e-12, Sum P(3) = 6.7e-12
Identities = 30/134 (22%), Positives = 56/134 (41%)
Query: 720 PRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSL--NGKFQWEPNSDFIKS 777
PR + GL + + + + RS D S+ +++ +L +G+ ++
Sbjct: 2633 PRGTEGLSASESLMLKSDAAKLRS--DSHSRSLSPNHNTLQTLKSDGRMSSSFRAESPGP 2690
Query: 778 NKISASP-PGSRRVSRA-PSPIS--RKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFN 833
S+SP P + SR+ PS S R SSP +++ + +D++
Sbjct: 2691 GSRSSSPKPKTLPASRSSPSGASSPRSSSPHDKNLPQKSAAPVKTKLDPPRERSKSDSYT 2750
Query: 834 QEPDVLRAQLEDLT 847
+PD LR + LT
Sbjct: 2751 LDPDTLRKKKMPLT 2764
Score = 48 (22.0 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 741 SRSATDGQSKPKGKSYHAS--PSLNG---KFQWEPNSDFIKSNKISASPPGSRRVSRAP- 794
SRS+ G S P+ S H P + K + +P + KS+ + P R+ + P
Sbjct: 2705 SRSSPSGASSPRSSSPHDKNLPQKSAAPVKTKLDPPRERSKSDSYTLDPDTLRK-KKMPL 2763
Query: 795 -SPI-SRKSSP 803
P+ R +SP
Sbjct: 2764 TEPLRGRSTSP 2774
Score = 38 (18.4 bits), Expect = 5.7e-11, Sum P(4) = 5.7e-11
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 760 PSLNGKFQWEPNSDFIKSNKIS 781
P F E SD++K +K S
Sbjct: 1988 PGNEALFSLETASDYVKDDKAS 2009
Score = 38 (18.4 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 11/41 (26%), Positives = 16/41 (39%)
Query: 670 NCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTT 710
+C V+ C + L P I + C C K+N T
Sbjct: 4320 DCSHVFHLQCCRRVLENRWLGPRITFGFISCPICKNKINHT 4360
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 194 (73.4 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 72/245 (29%), Positives = 108/245 (44%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFH 359
+ACG H++ +T +G+++S G G+ G+ G G S P KL L G N+ VA
Sbjct: 241 VACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDC 300
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
AV+ G L+ WG+ + L L +PR + G Q+ CG A +
Sbjct: 301 CLAVSADGSLFGWGNSEY-LQLASVTDSTQVNVPRCLPFSGVG-QVKQAACGGTGCAVLN 358
Query: 420 SAGKLFTFGDGTFGALGHGDRS-STSVPREVE-TL-------KELKTVMASCGVWHTAAI 470
G +F +G +G LG G T++P + TL E++ CG+ H AA+
Sbjct: 359 GEGHVFVWG---YGILGKGPNLVETALPEMIPPTLFGLTELNPEVRVSRIRCGLSHFAAL 415
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--H 528
+ G +LF WG G LG G E + P V + + VACG H
Sbjct: 416 TD--------RG----ELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEP--VDVACGVDH 461
Query: 529 SITIA 533
+T+A
Sbjct: 462 MVTLA 466
Score = 185 (70.2 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 101/381 (26%), Positives = 155/381 (40%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFS-WGEG--SGGKLG-HGVEADV 336
RR +P LE + S ACG +L +K + WG G +LG H D
Sbjct: 100 RRIQCVPYRLELDQKIS--SAACGYGFTLLSSKTRDVTKVWGMGLNKDSQLGFHRSRKDK 157
Query: 337 S--YPKLIDAL---------NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQ 384
+ Y +++ + + V+CG H+ +T +++ G+ + G
Sbjct: 158 TRGYEYVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVV 217
Query: 385 VSEI---SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
+EI SH + R +G Q+ + CG H+ +T G++++ G G G G G +
Sbjct: 218 ENEIYSESHKVHRMQD--FDG-QVVQVACGQDHSLFLTDKGEVYSCGWGADGQTGLGHYN 274
Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
TS P + L +A V A + S ++G LF WG+ QL
Sbjct: 275 ITSAPTK------LGGDLAGVNVVQVATYGDCCLAVS-ADG----SLFGWGNSEYLQLAS 323
Query: 502 GDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS-PG--ST 557
+V VP C+ S + ACG + L G VF G YG LG P T
Sbjct: 324 VTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLVET 380
Query: 558 G---KFPTRIEG----NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
P + G N + R + I CG H A ++ + E++ WGK G LG G E+
Sbjct: 381 ALPEMIPPTLFGLTELNPEVR-VSRIRCGLSHFAALTDRGELFVWGKNIRGCLGIGRLED 439
Query: 611 KQTPTLVEALRDKQVKSVVCG 631
+ P V + + V V CG
Sbjct: 440 QYFPWRV-TMPGEPV-DVACG 458
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 41/152 (26%), Positives = 69/152 (45%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-- 334
S D +P+ L + V + ACG ++ +G +F WG G GK + VE
Sbjct: 323 SVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLVETAL 382
Query: 335 -DVSYPKL--IDALNGS-NIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEIS 389
++ P L + LN + + CG H A+T G+L+ WG I LG+ G++ +
Sbjct: 383 PEMIPPTLFGLTELNPEVRVSRIRCGLSHFAALTDRGELFVWGKNIRGCLGI-GRLED-- 439
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+ P +V+ M G + + CG H + +
Sbjct: 440 QYFPWRVT--MPGEPVD-VACGVDHMVTLAKS 468
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 195 (73.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 96/361 (26%), Positives = 143/361 (39%)
Query: 300 SIACGSKHAVLVTKQGQIFS-WGEG--SGGKLG-HGVEADVS--Y---------PKLIDA 344
S ACG +L +K I WG G +LG H D + Y P +D
Sbjct: 111 SAACGYGFTLLSSKTKDITKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLEPSPVPLPLDR 170
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEI---SHWIPRKVSGQM 400
+ + V+CG H+ +T +++ G+ + G +EI SH + R
Sbjct: 171 PQETRVLQVSCGRAHSLVLTDGEGVFSMGNNSYGQCGRKVVENEIYSESHRVHRMQD--F 228
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
+G Q+ + CG H+ +T G++++ G G G G G + TS P + L +A
Sbjct: 229 DG-QVVQVACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTK------LGGDLA 281
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDI 519
V A + S GL F WG+ QL +V VP C+ S
Sbjct: 282 GVNVVQVATYGDCCLAVSADGGL-----FGWGNSEYLQLASVTDSTQVNVPRCLPFSGVG 336
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS-PG--STG---KFPTRIEGNIKHR-- 571
+ ACG + L G VF G YG LG P T P + G +
Sbjct: 337 QVKQAACGGTGCAVLNGEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPG 393
Query: 572 -YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ I CG H A ++++ E++ WGK G LG G E++ P V + V C
Sbjct: 394 VQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPM--DVAC 451
Query: 631 G 631
G
Sbjct: 452 G 452
Score = 193 (73.0 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 74/245 (30%), Positives = 107/245 (43%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFH 359
+ACG H++ +T QG+++S G G+ G+ G G S P KL L G N+ VA
Sbjct: 235 VACGQDHSLFLTDQGEVYSCGWGADGQTGLGHYNITSTPTKLGGDLAGVNVVQVATYGDC 294
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
AV+ G L+ WG+ + L L +PR + G Q+ CG A +
Sbjct: 295 CLAVSADGGLFGWGNSEY-LQLASVTDSTQVNVPRCLPFSGVG-QVKQAACGGTGCAVLN 352
Query: 420 SAGKLFTFGDGTFGALGHGDRS-STSVPREVET----LKELKT-VMAS---CGVWHTAAI 470
G +F +G +G LG G T++P + L E V S CG+ H AA+
Sbjct: 353 GEGHVFVWG---YGILGKGPNLLETALPEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAAL 409
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--H 528
+ G +LF WG G LG G E + P V + + VACG H
Sbjct: 410 T--------NRG----ELFVWGKNIRGCLGIGRLEDQYFPWRVTMPGEPM--DVACGVDH 455
Query: 529 SITIA 533
+T+A
Sbjct: 456 MVTLA 460
Score = 126 (49.4 bits), Expect = 0.00019, P = 0.00019
Identities = 40/149 (26%), Positives = 68/149 (45%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-- 334
S D +P+ L + V + ACG ++ +G +F WG G GK + +E
Sbjct: 317 SVTDSTQVNVPRCLPFSGVGQVKQAACGGTGCAVLNGEGHVFVWGYGILGKGPNLLETAL 376
Query: 335 -DVSYPKL--IDALN-GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEIS 389
++ P L + N G + + CG H A+T G+L+ WG I LG+ G++ +
Sbjct: 377 PEMIPPTLFGLSEFNPGVQVSRIRCGLSHFAALTNRGELFVWGKNIRGCLGI-GRLED-- 433
Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
+ P +V+ M G + + CG H +
Sbjct: 434 QYFPWRVT--MPG-EPMDVACGVDHMVTL 459
Score = 41 (19.5 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 312 TKQGQIFSWGEGSGGKLG 329
T+ +IF WG G LG
Sbjct: 56 TRADRIFVWGFSFSGALG 73
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 193 (73.0 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 86/280 (30%), Positives = 135/280 (48%)
Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWG--EGSGGKLGHGVEADV-SYPKLIDALNGSN 349
TV+++ +A G + +T +GQ++ WG + G LG + V + PKL+ L
Sbjct: 231 TVIVE---VAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLKKIK 287
Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL-LGQVSEISHWIPRKVSGQMEGLQISS 407
H+V CG+ H A+ G + +WG G N LG + + ++++ PR+ G +G I
Sbjct: 288 -HLV-CGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREF-GLPKG--IVH 342
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALG----HGDRSSTSV-PREVETLKELKTVMASC 462
I G +H+ A+ +GK+F +G +FG G GD + V P V++L + K V C
Sbjct: 343 IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSK-KNVTQIC 401
Query: 463 G-VWHTAAIVE-----VAGKTSG-SNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCV 513
G H+ A + V G+ G GL K+ T D A + D PR++ P V
Sbjct: 402 GGAHHSIAATQDGECLVWGRLDGYQTGL---KIDTLPDDAVIK-DERD-RPRILIEPTAV 456
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMG-SADYGQLG 552
I VA G +IA+ +G+ +S G SA Y Q G
Sbjct: 457 P---GIKAKAVAAGSDHSIAIDTSGRPWSWGFSATY-QTG 492
Score = 159 (61.0 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 78/309 (25%), Positives = 130/309 (42%)
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+G+ I VA G+ + A+T G +Y WG N G+LG ++ K+ ++ +I
Sbjct: 229 HGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPKLLPDLK--KI 286
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHG--DRSSTS--VPREVETLKELKTVMAS 461
+ CG H A+ G + ++G G LG +R+ + PRE K + V
Sbjct: 287 KHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLPKGI--VHIG 344
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDIS 520
G +H+ A+ + +GK GL+S +G+ + GD+E +V P V +
Sbjct: 345 AGAFHSFAVHQ-SGKVFAW-GLNS-----FGETGIRE-NAGDSEAAIVHPTVVDSLSKKN 396
Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI--EGNIKHRYIED--- 575
++ G +IA T G+ G D Q G T I E + IE
Sbjct: 397 VTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRILIEPTAV 456
Query: 576 -------IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE--ALRDKQVK 626
+A GS H + + ++WG A Q G G ++ + T++E A+R K +
Sbjct: 457 PGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIENTAVRGKSLN 516
Query: 627 SVVCGSNFT 635
G F+
Sbjct: 517 WAGGGGQFS 525
Score = 152 (58.6 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 58/194 (29%), Positives = 86/194 (44%)
Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGD--GAEGQLGHGDAEPRVVPLCV 513
T + S H IVEVA S S L+ + +++ WG +G LG DA+ +V
Sbjct: 220 TAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGF-DAKTKV-QTTP 277
Query: 514 KVSDDISFCK-VACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNI 568
K+ D+ K + CG + +AL G V S GS QLG R G
Sbjct: 278 KLLPDLKKIKHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREFGLP 337
Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG----HGDNENKQT-PTLVEALRDK 623
K I I G++H V +V+ WG + G+ G GD+E PT+V++L K
Sbjct: 338 KG--IVHIGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKK 395
Query: 624 QVKSVVCGSNFTAA 637
V + G++ + A
Sbjct: 396 NVTQICGGAHHSIA 409
Score = 141 (54.7 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 43/165 (26%), Positives = 77/165 (46%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLG----HG-VEADVSYPKLIDALNGSNIHMVAC 355
I G+ H+ V + G++F+WG S G+ G G EA + +P ++D+L+ N+ +
Sbjct: 343 IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLSKKNVTQICG 402
Query: 356 GEFHTCAVTLSGDLYTWG--DGIHNLGLL------GQVSEISHWIPRKV--SGQMEGLQI 405
G H+ A T G+ WG DG + GL V + PR + + G++
Sbjct: 403 GAHHSIAATQDGECLVWGRLDG-YQTGLKIDTLPDDAVIKDERDRPRILIEPTAVPGIKA 461
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
++ G H+ AI ++G+ +++G G G + V +E
Sbjct: 462 KAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQGTQDDVEVATVIE 506
Score = 131 (51.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 51/224 (22%), Positives = 88/224 (39%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV----EADVSYPKLI 342
PK+L + + + CG H + + +G + SWG G +LG + + + P+
Sbjct: 277 PKLLPDLKKI--KHLVCGDNHVLALNDKGAVLSWGSGQQNQLGRRIIERNKLNGLQPREF 334
Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRK-VSGQM 400
G +H + G FH+ AV SG ++ WG + G+ + I V +
Sbjct: 335 GLPKGI-VH-IGAGAFHSFAVHQSGKVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSL 392
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFG--DGTFGALGHGDRSSTSVPREVETLKELKTV 458
++ IC G H+ A T G+ +G DG L +V ++ + +
Sbjct: 393 SKKNVTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDERDRPRI--L 450
Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
+ V A AG +S + ++WG A Q G G
Sbjct: 451 IEPTAVPGIKAKAVAAGSDHSIAIDTSGRPWSWGFSATYQTGQG 494
Score = 91 (37.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 27/78 (34%), Positives = 41/78 (52%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA---DVSYPKLIDALNGSNIHMV--ACGEFHTCAVTLS 366
T + ++ GEGS G+LG GV DV P+L L ++ +V A G H A+T
Sbjct: 107 TAKLNVYVCGEGSSGELGLGVGKNVIDVKRPRLNPHLLPDDVGVVQVAVGGMHCVALTHD 166
Query: 367 GDLYTWGDGIHNLGLLGQ 384
+ TWG +++ G LG+
Sbjct: 167 NKVLTWG--VNDQGALGR 182
Score = 84 (34.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 26/83 (31%), Positives = 40/83 (48%)
Query: 561 PTRIEGN-IKH-RYIEDIACGSYHIAVVSSKSEVYTWG--KGANGQLGHGDNENKQT-PT 615
PT I + H I ++A G ++ + +VY WG + +G LG QT P
Sbjct: 219 PTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFRSNDGILGFDAKTKVQTTPK 278
Query: 616 LVEALRDKQVKSVVCGSNFTAAI 638
L+ L K++K +VCG N A+
Sbjct: 279 LLPDL--KKIKHLVCGDNHVLAL 299
Score = 66 (28.3 bits), Expect = 7.0e-10, Sum P(2) = 7.0e-10
Identities = 16/58 (27%), Positives = 24/58 (41%)
Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
+R L P +L V +A G H V +T ++ +WG G LG + Y
Sbjct: 135 KRPRLNPHLLPDDV--GVVQVAVGGMHCVALTHDNKVLTWGVNDQGALGRDTTWEGGY 190
Score = 58 (25.5 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/79 (29%), Positives = 38/79 (48%)
Query: 362 AVTLSGDLYTWGDGIHN-LGL-LGQ-VSEISHWIPRKVSGQM-EGLQISSICCGPWHTAA 417
A T ++Y G+G LGL +G+ V ++ PR + + + + + G H A
Sbjct: 105 APTAKLNVYVCGEGSSGELGLGVGKNVIDVKR--PRLNPHLLPDDVGVVQVAVGGMHCVA 162
Query: 418 ITSAGKLFTFGDGTFGALG 436
+T K+ T+G GALG
Sbjct: 163 LTHDNKVLTWGVNDQGALG 181
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 179 (68.1 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 81/267 (30%), Positives = 118/267 (44%)
Query: 359 HTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H T G + T G G + LGL V E P VS + +Q + G HT
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK--PALVSIPEDVVQAEA---GGMHTVC 81
Query: 418 ITSAGKLFTFGDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
++ +G++++FG GALG S VP +VE L+E K V S G HTAA+ +
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTD--- 136
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR---VVPLCVKVSDDISFCKVACGHSITI 532
+G ++F WG + G EP +VP V+V D+ KVA G+ +
Sbjct: 137 -----DG----RVFLWGSFRDNNGVIGLLEPMKKSMVP--VQVQLDVPVVKVASGNDHLV 185
Query: 533 ALTATGQVFSMGSADYGQLGS-P-------GSTGK----FPTRI----EGNIKHRYIEDI 576
LTA G ++++G + GQLG P G G P + G+ H +D
Sbjct: 186 MLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDA 245
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQL 603
CG+Y +S + VY +G QL
Sbjct: 246 FCGAYFTFAISHEGHVYGFGLSNYHQL 272
Score = 176 (67.0 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 72/260 (27%), Positives = 119/260 (45%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ ++ G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTDDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
+F R + V + L+ +K M V +V+VA L++
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGD 192
Query: 488 LFTWGDGAEGQLGH--------GDA---EPRVVPLCVKVSD-----DISFCKVACGHSIT 531
L+T G G +GQLG G E +VP CV + + F CG T
Sbjct: 193 LYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFT 252
Query: 532 IALTATGQVFSMGSADYGQL 551
A++ G V+ G ++Y QL
Sbjct: 253 FAISHEGHVYGFGLSNYHQL 272
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVS 337
+R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 56 ERKKPALVSIPEDVVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 110
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKV 396
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 111 VPGKVELQE--KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 168
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
Q++ + + + G H +T+ G L+T G G G LG
Sbjct: 169 --QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 147 (56.8 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/197 (26%), Positives = 92/197 (46%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H + T G + T G G G LG G+ + ++ E V A G HT + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DVVQAEAGGMHTVCLSK- 84
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSIT 531
SG +++++G EG LG + +VP V++ + + +V+ G S T
Sbjct: 85 ----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSHT 131
Query: 532 IALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
ALT G+VF GS + G +G P P +++ ++ + +A G+ H+ +++
Sbjct: 132 AALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLT 188
Query: 588 SKSEVYTWGKGANGQLG 604
+ ++YT G G GQLG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 167 (63.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 65/200 (32%), Positives = 95/200 (47%)
Query: 359 HTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H T G + T G G + LGL V E P VS + +Q + G HT
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK--PALVSIPEDVVQAEA---GGMHTVC 81
Query: 418 ITSAGKLFTFGDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
++ +G++++FG GALG S VP +VE L+E K V S G HTAA+ +
Sbjct: 82 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTD--- 136
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR---VVPLCVKVSDDISFCKVACGHSITI 532
+G ++F WG + G EP +VP V+V D+ KVA G+ +
Sbjct: 137 -----DG----RVFLWGSFRDNNGVIGLLEPMKKSMVP--VQVQLDVPVVKVASGNDHLV 185
Query: 533 ALTATGQVFSMGSADYGQLG 552
LTA G ++++G + GQLG
Sbjct: 186 MLTADGDLYTLGCGEQGQLG 205
Score = 157 (60.3 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 45/160 (28%), Positives = 76/160 (47%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVS 337
+R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 56 ERKKPALVSIPEDVVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 110
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKV 396
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +V
Sbjct: 111 VPGKVELQE--KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV 168
Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
Q++ + + + G H +T+ G L+T G G G LG
Sbjct: 169 --QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 205
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 55/193 (28%), Positives = 94/193 (48%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ ++ G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTDDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
+F R + V + L+ +K M V +V+VA L++
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGD 192
Query: 488 LFTWGDGAEGQLG 500
L+T G G +GQLG
Sbjct: 193 LYTLGCGEQGQLG 205
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 53/197 (26%), Positives = 92/197 (46%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H + T G + T G G G LG G+ + ++ E V A G HT + +
Sbjct: 27 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DVVQAEAGGMHTVCLSK- 84
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSIT 531
SG +++++G EG LG + +VP V++ + + +V+ G S T
Sbjct: 85 ----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSHT 131
Query: 532 IALTATGQVFSMGSA--DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
ALT G+VF GS + G +G P P +++ ++ + +A G+ H+ +++
Sbjct: 132 AALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLT 188
Query: 588 SKSEVYTWGKGANGQLG 604
+ ++YT G G GQLG
Sbjct: 189 ADGDLYTLGCGEQGQLG 205
>DICTYBASE|DDB_G0280093 [details] [associations]
symbol:gacGG "RhoGAP domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005096
"GTPase activator activity" evidence=IEA] InterPro:IPR000198
InterPro:IPR008936 Pfam:PF00620 PROSITE:PS50238 SMART:SM00324
dictyBase:DDB_G0280093 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007165 GO:GO:0005096 GO:GO:0043547
Gene3D:1.10.555.10 SUPFAM:SSF48350 GenomeReviews:CM000152_GR
EMBL:AAFI02000035 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HSSP:Q07960 RefSeq:XP_641238.1
ProteinModelPortal:Q54VW7 EnsemblProtists:DDB0233849 GeneID:8622369
KEGG:ddi:DDB_G0280093 InParanoid:Q54VW7 OMA:INSIVEC Uniprot:Q54VW7
Length = 1203
Score = 151 (58.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 65/244 (26%), Positives = 105/244 (43%)
Query: 405 ISSICC---GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVM 459
I +IC G H+ A+T G+L+ +GD L +++ TS+ P +++ + +
Sbjct: 33 IPNICFMDNGYNHSLALTETGELYGWGDNRHHQLS-SNKAITSIDKPIKIQVIPNQRVKS 91
Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL-----CVK 514
SCG +AAI+E NGL L+ WG EG G P V L CV
Sbjct: 92 ISCGGNFSAAIME--------NGL----LYVWGTLIEG--GKCTESPTKVDLLKGVTCVS 137
Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYI 573
+ I+ C V T V++ G+ GQLG G S P R+ + + I
Sbjct: 138 IG--INHCAVVADSPTT---PEKRSVYTWGTNRKGQLGVVGDSITNAPRRV--TLGSKAI 190
Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
+ CG A + +EV+ WG + Q+ +N ++ V+ + + + C N
Sbjct: 191 S-VCCGEEFTAAIVEGNEVFVWGYNKSRQIC-SNNSDEIISIPVKPFLGRDIVELSCTKN 248
Query: 634 FTAA 637
+ AA
Sbjct: 249 YIAA 252
Score = 150 (57.9 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 65/214 (30%), Positives = 99/214 (46%)
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
QG ++ WG+ GK ++ LI NI + G H+ A+T +G+LY WG
Sbjct: 13 QGVLYCWGDKFSGK--------PTFNPLIP-----NICFMDNGYNHSLALTETGELYGWG 59
Query: 374 DGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
D H+ L ++ I P K+ + ++ SI CG +AAI G L+ +G
Sbjct: 60 DNRHHQLSSNKAITSIDK--PIKIQ-VIPNQRVKSISCGGNFSAAIMENGLLYVWG---- 112
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
L G + + S P +V+ LK + V S G+ H A + + T+ + ++TWG
Sbjct: 113 -TLIEGGKCTES-PTKVDLLKGVTCV--SIGINHCAVVAD--SPTTPEK----RSVYTWG 162
Query: 493 DGAEGQLGH-GDA---EPRVVPLCVKVSDDISFC 522
+GQLG GD+ PR V L K IS C
Sbjct: 163 TNRKGQLGVVGDSITNAPRRVTLGSKA---ISVC 193
Score = 146 (56.5 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 52/176 (29%), Positives = 81/176 (46%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCA 362
G H++ +T+ G+++ WG+ +L + P I + + ++CG + A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI---- 418
+ +G LY WG I G+ +E P KV ++G+ SI G H A +
Sbjct: 102 IMENGLLYVWGTLIEG----GKCTES----PTKVD-LLKGVTCVSI--GINHCAVVADSP 150
Query: 419 TSAGK--LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
T+ K ++T+G G LG S T+ PR V TL K + CG TAAIVE
Sbjct: 151 TTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRV-TLGS-KAISVCCGEEFTAAIVE 204
Score = 143 (55.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 47/159 (29%), Positives = 73/159 (45%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
+L+ WGD QL A + P+ ++V + ++CG + + A+ G ++ G+
Sbjct: 54 ELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGT 113
Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS------KSEVYTWGKGA 599
G G + PT+++ +K + ++ G H AVV+ K VYTWG
Sbjct: 114 LIEG-----GKCTESPTKVD-LLKG--VTCVSIGINHCAVVADSPTTPEKRSVYTWGTNR 165
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GQLG + P V L K + SV CG FTAAI
Sbjct: 166 KGQLGVVGDSITNAPRRV-TLGSKAI-SVCCGEEFTAAI 202
Score = 127 (49.8 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 43/138 (31%), Positives = 64/138 (46%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEG-SGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
+SI+CG + + + G ++ WG GGK E+ P +D L G + V+ G
Sbjct: 90 KSISCGGNFSAAIMENGLLYVWGTLIEGGKC---TES----PTKVDLLKG--VTCVSIGI 140
Query: 358 FHTCAVTLSG-------DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
H CAV +YTWG + G LG V + PR+V+ G + S+CC
Sbjct: 141 NH-CAVVADSPTTPEKRSVYTWGT--NRKGQLGVVGDSITNAPRRVT---LGSKAISVCC 194
Query: 411 GPWHTAAITSAGKLFTFG 428
G TAAI ++F +G
Sbjct: 195 GEEFTAAIVEGNEVFVWG 212
Score = 97 (39.2 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 30/123 (24%), Positives = 57/123 (46%)
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
+ ++F WG Q+ +++ ++ + VK +++C + A + G V
Sbjct: 203 VEGNEVFVWGYNKSRQICSNNSD-EIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVCV 261
Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
GS + Q+ G KF N ++ I+ I+ + HI V+S K E+++WG + Q
Sbjct: 262 WGSNE--QVCRIGDD-KFI-----NFPNK-IKQISASTSHILVLSEKGEIFSWGNSEDNQ 312
Query: 603 LGH 605
L H
Sbjct: 313 LSH 315
Score = 47 (21.6 bits), Expect = 9.8e-11, Sum P(3) = 9.8e-11
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 781 SASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE 823
S S + + +PS I SSPA + + NS +L + ++E
Sbjct: 834 SGSSSNNNNSNNSPSLIGSNSSPALTFS-NSSGNLIETTKLYE 875
Score = 46 (21.3 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 27/119 (22%), Positives = 43/119 (36%)
Query: 721 RNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKI 780
++ + + N N N+ + + S G S +SP+L+ S + S
Sbjct: 746 KDGNNINNNNNNNNNNNNNNNNNNSSNSSSSSGSSLSSSPNLSPTIV--NRSGY--SLSF 801
Query: 781 SASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVL 839
S P SR S + + S A F ANS S N+N N P ++
Sbjct: 802 SGGTPSSRDSS--VNNLLNTSGGAIQSIQRQF---ANSG-----SSSNNNNSNNSPSLI 850
Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 17/94 (18%), Positives = 37/94 (39%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG-------SPGSTGKFPTRIEGNIKHRYIED 575
+++ S + L+ G++FS G+++ QL SP T +
Sbjct: 285 QISASTSHILVLSEKGEIFSWGNSEDNQLSHKLDVNSSPNINSSSGTTTPTTNTTTTTKK 344
Query: 576 IACGSYHIAVVSSKS--EVYTWGKGANGQLGHGD 607
++ + ++ VY+WGK + + G+
Sbjct: 345 STLQFNNVYQLEGRNVLSVYSWGKSSGAIIEPGN 378
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 150 (57.9 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 45/124 (36%), Positives = 58/124 (46%)
Query: 433 GALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G G D S +T P V E++ V SCG H+ ++E NG ++T
Sbjct: 892 GERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLME--------NG----DVYT 939
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
+G G GQLGHGD R P V+ S +V G + T L GQVF+ GS GQ
Sbjct: 940 FGYGQHGQLGHGDVNSRGCPTLVQALPGPS-TQVTAGSNHTAVLVMDGQVFTFGSFSKGQ 998
Query: 551 LGSP 554
LG P
Sbjct: 999 LGRP 1002
Score = 148 (57.2 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 33/96 (34%), Positives = 54/96 (56%)
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
S + G+ + T P + + + R ++ ++CG +H V+ +VYT+G G +GQLG
Sbjct: 891 SGERGEKDASKVTTYPPGSVRFDCEVRAVQ-VSCGFHHSVVLMENGDVYTFGYGQHGQLG 949
Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
HGD ++ PTLV+AL + V GSN TA + +
Sbjct: 950 HGDVNSRGCPTLVQALPGPSTQ-VTAGSNHTAVLVM 984
Score = 146 (56.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 29/95 (30%), Positives = 54/95 (56%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
A ++CG H+V++ + G ++++G G G+LGHG P L+ AL G + + A G
Sbjct: 918 AVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTA-GS 976
Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW 391
HT + + G ++T+G + G LG+ + ++ +W
Sbjct: 977 NHTAVLVMDGQVFTFGS--FSKGQLGRPILDVPYW 1009
Score = 121 (47.7 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
S+++ + P V E ++ + CG H+ + G ++TFG G G LGHGD +S
Sbjct: 900 SKVTTYPPGSVRFDCE-VRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGC 958
Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
P V+ L T + G HTA +V +G ++FT+G ++GQLG
Sbjct: 959 PTLVQALPGPST-QVTAGSNHTAVLV--------MDG----QVFTFGSFSKGQLG 1000
Score = 118 (46.6 bits), Expect = 2.5e-07, Sum P(3) = 2.5e-07
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 495 AEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
A G+ G DA P V+ ++ +V+CG ++ L G V++ G +GQLG
Sbjct: 890 ASGERGEKDASKVTTYPPGSVRFDCEVRAVQVSCGFHHSVVLMENGDVYTFGYGQHGQLG 949
Query: 553 SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
+ PT ++ + + + GS H AV+ +V+T+G + GQLG
Sbjct: 950 HGDVNSRGCPTLVQA-LPGPSTQ-VTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 111 (44.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 36/142 (25%), Positives = 62/142 (43%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSY-PKLIDALNGSNIHMVAC 355
S+ HA+LV + G +F G S G+ G ++ Y PK I + G + AC
Sbjct: 562 SVGHDGSHALLVAEDGSVFFTGSASKGEDGESAKSRRQSKPYKPKKIIKMEGKIVVCTAC 621
Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
+ ++ G+LY +G D I+ S+ S + ++G ++ + G H
Sbjct: 622 NNGSSSVISKDGELYMFGKDAIY--------SDSSSLV-----SDLKGHFVTQVAMGKAH 668
Query: 415 TAAITSAGKLFTFGDGTFGALG 436
T + G+++TFG G G
Sbjct: 669 TCVLMKNGEVWTFGVNNKGQCG 690
Score = 93 (37.8 bits), Expect = 7.9e-09, Sum P(3) = 7.9e-09
Identities = 22/83 (26%), Positives = 47/83 (56%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
AC + + +++K G+++ +G+ + + +D S L+ L G + VA G+ HTC
Sbjct: 620 ACNNGSSSVISKDGELYMFGKDA-------IYSDSS--SLVSDLKGHFVTQVAMGKAHTC 670
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ 384
+ +G+++T+G ++N G G+
Sbjct: 671 VLMKNGEVWTFG--VNNKGQCGR 691
Score = 54 (24.1 bits), Expect = 6.1e-05, Sum P(3) = 6.1e-05
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+A G H ++ K G+++++G + G+ G A
Sbjct: 662 VAMGKAHTCVLMKNGEVWTFGVNNKGQCGRDTGA 695
Score = 51 (23.0 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 43/163 (26%), Positives = 64/163 (39%)
Query: 399 QMEGLQISSICCGPWHTAAITSAGKL--FTFG-DGTFGALGHGDRSS--TSVPREVETLK 453
Q G++ G W IT + K+ F+ G DG+ L D S T + E +
Sbjct: 533 QSLGIKQGGPSAGKWVELPITKSPKIVHFSVGHDGSHALLVAEDGSVFFTGSASKGEDGE 592
Query: 454 ELKTVMASCGVWHTAAIVEVAGK----TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
K+ S + I+++ GK T+ +NG SS DG G DA
Sbjct: 593 SAKSRRQS-KPYKPKKIIKMEGKIVVCTACNNGSSS---VISKDGELYMFGK-DAIYSDS 647
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
V +VA G + T L G+V++ G + GQ G
Sbjct: 648 SSLVSDLKGHFVTQVAMGKAHTCVLMKNGEVWTFGVNNKGQCG 690
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 686 KTALAPEINKPYRVCDDCFIKLNT 709
K+ L P +++P DD F +NT
Sbjct: 2487 KSLLVP-VDEPKTTTDDFFKDVNT 2509
Score = 39 (18.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 732 RVTEK-ENMNSRSATDGQSKPKG--KSYHASPSLNGKFQWEPNSDFIKSNKIS 781
+VT EN+NS S G P F E SD++K +K S
Sbjct: 2022 KVTSAHENLNSWIELKKYSGSSGWPTMVLVLPGNEALFSLETASDYVKDDKAS 2074
>UNIPROTKB|H0YEL8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860
EMBL:AC124058 EMBL:AC124078 Ensembl:ENST00000529151 Uniprot:H0YEL8
Length = 299
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/247 (26%), Positives = 102/247 (41%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEG---SGGKLGHGVEADVSY----PKLIDALNGSNIHMV 353
IA G +HAV T G +F WG G G +L G + + P + L S V
Sbjct: 22 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 81
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGP 412
G H+ ++T +G++Y WG H L + + + +P+K+ + ++++I G
Sbjct: 82 LAGSDHSASLTDAGEVYVWGSNKHGQ-LANEAAFLP--VPQKIEAHCFQNEKVTAIWSGW 138
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET----LKELKTVMASCGVWHTA 468
H A T GK+FT+G +G LG + E + M S T
Sbjct: 139 THLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTG 198
Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACG 527
A EV+ + + + ++WG G G G E V P V+ S V CG
Sbjct: 199 A-TEVSCGSEHNLAIIGGVCYSWGWNEHGMCGDG-TEANVWAPKPVQALLSSSGLLVGCG 256
Query: 528 HSITIAL 534
++AL
Sbjct: 257 AGHSLAL 263
Score = 169 (64.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/256 (25%), Positives = 112/256 (43%)
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
++ I G H A T++G +F +G G + G ++P T KE V G
Sbjct: 18 KVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPLFF-TAKEPSRVT---G 72
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLCVKVSDDIS 520
+ ++ A+ +AG ++ + +++ WG GQL + A P+ + ++ ++
Sbjct: 73 LENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVT 132
Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST--G-------KF-----PTRIEG 566
+ G + +A T TG++F+ G ADYGQLG T G F P
Sbjct: 133 --AIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMP 190
Query: 567 NIKHRYI--EDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
+ H +++CGS H +A++ Y+WG +G G G N P V+AL
Sbjct: 191 SSPHCLTGATEVSCGSEHNLAIIGGVC--YSWGWNEHGMCGDGTEANVWAPKPVQALLSS 248
Query: 624 QVKSVVCGSNFTAAIC 639
V CG+ + A+C
Sbjct: 249 SGLLVGCGAGHSLALC 264
Score = 147 (56.8 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 48/193 (24%), Positives = 80/193 (41%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVAC 355
A + GS H+ +T G+++ WG G+L + A + P+ I+A + +
Sbjct: 78 AMCVLAGSDHSASLTDAGEVYVWGSNKHGQLANEA-AFLPVPQKIEAHCFQNEKVTAIWS 136
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRK------VSGQMEGLQISSI 408
G H A T +G ++TWG + G LG+ E W K S + S
Sbjct: 137 GWTHLVAQTETGKMFTWGRA--DYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPH 194
Query: 409 C--------CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
C CG H AI G +++G G G G ++ P+ V+ L ++
Sbjct: 195 CLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLV 253
Query: 461 SCGVWHTAAIVEV 473
CG H+ A+ ++
Sbjct: 254 GCGAGHSLALCQL 266
Score = 137 (53.3 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 62/262 (23%), Positives = 110/262 (41%)
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGL 403
L+ + +A G H A T SG ++ WG G+ + G L + + K ++ GL
Sbjct: 14 LHKEKVVCIAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGL 73
Query: 404 QISSICC---GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVM 459
+ S C G H+A++T AG+++ +G G L + + + VP+++E + + V
Sbjct: 74 ENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVT 132
Query: 460 ASCGVW-HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH------G---DAEPRVV 509
A W H A E K+FTWG GQLG G + + +
Sbjct: 133 AIWSGWTHLVAQTETG------------KMFTWGRADYGQLGRKLETYEGWKLEKQDSFL 180
Query: 510 PLCVKVSDDIS---FC-----KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF- 560
P C + + + C +V+CG +A+ G +S G ++G G +
Sbjct: 181 P-CSRPPNSMPSSPHCLTGATEVSCGSEHNLAIIG-GVCYSWGWNEHGMCGDGTEANVWA 238
Query: 561 PTRIEGNIKHRYIEDIACGSYH 582
P ++ + + + CG+ H
Sbjct: 239 PKPVQALLSSSGLL-VGCGAGH 259
>UNIPROTKB|B4DFC0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 UniGene:Hs.32470 HGNC:HGNC:17499
EMBL:AC055860 EMBL:AC124058 EMBL:AC124078 EMBL:AK294022
IPI:IPI00977685 SMR:B4DFC0 STRING:B4DFC0 Ensembl:ENST00000532265
UCSC:uc010rcz.1 Uniprot:B4DFC0
Length = 174
Score = 160 (61.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 44/147 (29%), Positives = 76/147 (51%)
Query: 310 LVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
++T+ GQ+ S G S G+LG HG V P+ I+ L+ + +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 368 DLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICC---GPWHTAAITSAGK 423
++ WG G+ + G L + + K ++ GL+ S C G H+A++T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVE 450
++ +G G L + + + VP+++E
Sbjct: 119 VYVWGSNKHGQLAN-EAAFLPVPQKIE 144
Score = 138 (53.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 487 KLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
++ + G + GQLG HG PR VVP +++ + C +A G +A TA+G VF
Sbjct: 7 QVLSCGSNSFGQLGVPHG---PRRCVVPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQ 62
Query: 543 MGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ A G+ PG T K P+R+ G +++ + GS H A ++ EVY
Sbjct: 63 WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAGEVYV 121
Query: 595 WGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG 631
WG +GQL + + P +EA ++++V ++ G
Sbjct: 122 WGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSG 159
Score = 125 (49.1 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 35/127 (27%), Positives = 58/127 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEG---SGGKLGHGVEADVSY----PKLIDALNGSNIHMV 353
IA G +HAV T G +F WG G G +L G + + P + L S V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGP 412
G H+ ++T +G++Y WG H L + + + +P+K+ + ++++I G
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHGQ-LANEAAFLP--VPQKIEAHCFQNEKVTAIWSGW 160
Query: 413 WHTAAIT 419
H A T
Sbjct: 161 THLVAQT 167
Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
Identities = 48/177 (27%), Positives = 75/177 (42%)
Query: 418 ITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+T G++ + G +FG LG HG R VP+ +E KE K V + G+ H VA
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHA-----VAA 54
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD-----ISFCKVAC---G 527
SG +F WG G G + +PL + + K C G
Sbjct: 55 TASGI-------VFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 106
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHI 583
+ +LT G+V+ GS +GQL + + P +IE + ++ + I G H+
Sbjct: 107 SDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHL 163
>UNIPROTKB|E9PR50 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00983666 ProteinModelPortal:E9PR50 SMR:E9PR50
Ensembl:ENST00000530613 ArrayExpress:E9PR50 Bgee:E9PR50
Uniprot:E9PR50
Length = 165
Score = 160 (61.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 44/147 (29%), Positives = 76/147 (51%)
Query: 310 LVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
++T+ GQ+ S G S G+LG HG V P+ I+ L+ + +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 368 DLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICC---GPWHTAAITSAGK 423
++ WG G+ + G L + + K ++ GL+ S C G H+A++T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVE 450
++ +G G L + + + VP+++E
Sbjct: 119 VYVWGSNKHGQLAN-EAAFLPVPQKIE 144
Score = 138 (53.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 48/159 (30%), Positives = 79/159 (49%)
Query: 487 KLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
++ + G + GQLG HG PR VVP +++ + C +A G +A TA+G VF
Sbjct: 7 QVLSCGSNSFGQLGVPHG---PRRCVVPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQ 62
Query: 543 MGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ A G+ PG T K P+R+ G +++ + GS H A ++ EVY
Sbjct: 63 WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAGEVYV 121
Query: 595 WGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG 631
WG +GQL + + P +EA ++++V ++ G
Sbjct: 122 WGSNKHGQLAN-EAAFLPVPQKIEAHCFQNEKVTAIWSG 159
Score = 123 (48.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 34/125 (27%), Positives = 57/125 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEG---SGGKLGHGVEADVSY----PKLIDALNGSNIHMV 353
IA G +HAV T G +F WG G G +L G + + P + L S V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGP 412
G H+ ++T +G++Y WG H L + + + +P+K+ + ++++I G
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKHGQ-LANEAAFLP--VPQKIEAHCFQNEKVTAIWSGW 160
Query: 413 WHTAA 417
H A
Sbjct: 161 THLVA 165
Score = 113 (44.8 bits), Expect = 0.00018, P = 0.00018
Identities = 48/177 (27%), Positives = 75/177 (42%)
Query: 418 ITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+T G++ + G +FG LG HG R VP+ +E KE K V + G+ H VA
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHA-----VAA 54
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD-----ISFCKVAC---G 527
SG +F WG G G + +PL + + K C G
Sbjct: 55 TASGI-------VFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 106
Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHI 583
+ +LT G+V+ GS +GQL + + P +IE + ++ + I G H+
Sbjct: 107 SDHSASLTDAGEVYVWGSNKHGQLANEAAFLPVPQKIEAHCFQNEKVTAIWSGWTHL 163
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 194 (73.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 59/191 (30%), Positives = 93/191 (48%)
Query: 307 HAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM---VACGEFHTCA 362
H V T ++++WG+ + LGHG + +P+L+D + S +++ V C +FH+
Sbjct: 133 HVVFKNTDPTEVYTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLC-KFHSVF 191
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
++ G +YT G G G LG E + +PR V G + G S + HT +T G
Sbjct: 192 LSQQGQVYTCGHG--RGGRLGHGDEQTCLVPRLVEG-LSGHSCSQVAAAKDHTVVLTEDG 248
Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVET-LKELKTVMA--SCGVWHTAAIVE---VAG 475
++TFG TF LG SS +VPR++ +K+ TV+ + W E V G
Sbjct: 249 CVYTFGLNTFHQLGIIPPPSSCNVPRQLTVRMKKGHTVVCRKAWRFWQVLWTSEDFLVLG 308
Query: 476 KTSGSNGLSSK 486
SG G+ K
Sbjct: 309 LNSGHLGILRK 319
Score = 179 (68.1 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 39/117 (33%), Positives = 69/117 (58%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
Q + C H+V +++QGQ+++ G G GG+LGHG E P+L++ L+G + VA +
Sbjct: 181 QVVLC-KFHSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKD 239
Query: 359 HTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQME-GLQISSICCGPW 413
HT +T G +YT+G + H LG++ S + +PR+++ +M+ G + +C W
Sbjct: 240 HTVVLTEDGCVYTFGLNTFHQLGIIPPPSSCN--VPRQLTVRMKKGHTV--VCRKAW 292
Score = 132 (51.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 46/154 (29%), Positives = 74/154 (48%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T +++T+GD T LGHG ++S P EL + + V+ + +V
Sbjct: 139 TDPTEVYTWGDNTNFTLGHGSQNSKHHP-------ELLDLFSRSRVY----VKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS + +++T G G G+LGHGD + +VP V+ S +VA T+ LT
Sbjct: 188 HSVFLSQQGQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHSCSQVAAAKDHTVVLTED 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIK 569
G V++ G + QLG P S+ P ++ +K
Sbjct: 248 GCVYTFGLNTFHQLGIIPPPSSCNVPRQLTVRMK 281
Score = 46 (21.3 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 35/145 (24%), Positives = 61/145 (42%)
Query: 677 KLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNS--SGLFQNCKRVT 734
KL ++ M E N + + + S N+ P +S S F+N +
Sbjct: 1152 KLSQKQRKMMALTTKENNSGTNSMEP-ILTAPSKSPKPVNAWAPLHSPSSSSFRNFL-LE 1209
Query: 735 EKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPN-SDFIKSNKISASPPGSRRVSRA 793
EK+ + R + D K K SP+LN + P+ + ++SN +S P + +
Sbjct: 1210 EKKPVPGRGSGDHVKKVCFKGTENSPALNVA-RCSPHGTPGLESNHVSDFP-----LVDS 1263
Query: 794 PSP---ISRKSSPACS-ITMNSFTD 814
P+P S +SPA + +T S +
Sbjct: 1264 PNPWLSSSLAASPAVAPVTFASIVE 1288
>DICTYBASE|DDB_G0282381 [details] [associations]
symbol:gefC "Ras nucleotide exchange factor"
species:44689 "Dictyostelium discoideum" [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] InterPro:IPR000219
InterPro:IPR000651 InterPro:IPR001895 InterPro:IPR008937
InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618 Pfam:PF00621
PROSITE:PS00720 PROSITE:PS00741 PROSITE:PS50009 PROSITE:PS50010
PROSITE:PS50212 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0282381
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007264 EMBL:AAFI02000047
GenomeReviews:CM000152_GR GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
Gene3D:1.10.840.10 InterPro:IPR023578 SUPFAM:SSF48366
PANTHER:PTHR23113 HSSP:Q07889 EMBL:AY160092 RefSeq:XP_640241.1
ProteinModelPortal:Q8IS20 STRING:Q8IS20 EnsemblProtists:DDB0215004
GeneID:8623780 KEGG:ddi:DDB_G0282381 InParanoid:Q8IS20 OMA:SIATIRG
Uniprot:Q8IS20
Length = 1457
Score = 161 (61.7 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 80/315 (25%), Positives = 123/315 (39%)
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLL-----------GQVSEISHWIPRK 395
+ I VA G +H +T G+++TWG + LG L Q +S P
Sbjct: 333 NTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVDTQQQQQQQLQQQQSMSSLQPSA 392
Query: 396 VSGQMEGLQISSIC--------C------GPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
S + + C C G +TAA+T G+L+ +G G LG GD
Sbjct: 393 SSSSPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTI 452
Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
P V LK +C H+A E SG K++ WG E G
Sbjct: 453 DRRTPTRVIRLKNEVVSTIACSSTHSACYTE-----SG-------KMYVWGQSDE--TGK 498
Query: 502 GDAEPRVVPLCVKVSDDIS---------FC-------KVACGHSITIALTATGQVFSMGS 545
A P +P+ + +I F ++ACG LT G+VF
Sbjct: 499 IQAIPSPLPIHSYLDREIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVFMW-- 556
Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
++ PG P + +++ + +I G++H+ ++ EV T G+ GQLG
Sbjct: 557 ----EI--PG----IPIPLRNALENHSVRNIVMGNFHLVCLTDSGEVVTIGRNKTGQLGR 606
Query: 606 GDNENKQTPTLVEAL 620
D EN+ P +V+ L
Sbjct: 607 TDAENE--PGIVKQL 619
Score = 147 (56.8 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 42/160 (26%), Positives = 71/160 (44%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
SS+ + PK++E V + IA G K+ +T+ G+++ WG G+LG G D
Sbjct: 398 SSSSLQTTCTPKMVEIKCV---KYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDR 454
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG--DGIHNLGLLGQVSEISHWIPR 394
P + L + +AC H+ T SG +Y WG D + + I ++ R
Sbjct: 455 RTPTRVIRLKNEVVSTIACSSTHSACYTESGKMYVWGQSDETGKIQAIPSPLPIHSYLDR 514
Query: 395 KVS----GQMEGL-----QISSICCGPWHTAAITSAGKLF 425
++ G + G +I + CG A +T G++F
Sbjct: 515 EIKSPNGGGVGGFFGGGGKIKQLACGQRCIAVLTQMGEVF 554
Score = 120 (47.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 26/84 (30%), Positives = 47/84 (55%)
Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
SP S+ T ++ + ++ IA G + A ++ E+Y WG +G+LG GD +++
Sbjct: 396 SPSSSSLQTTCTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGLGDTIDRR 455
Query: 613 TPTLVEALRDKQVKSVVCGSNFTA 636
TPT V L+++ V ++ C S +A
Sbjct: 456 TPTRVIRLKNEVVSTIACSSTHSA 479
Score = 120 (47.3 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 34/119 (28%), Positives = 58/119 (48%)
Query: 512 CVKVSDDISFCK-VACGHSITIALTATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNI 568
C +I K +A G T ALT G+++ G ++G+LG G T + PTR+ +
Sbjct: 406 CTPKMVEIKCVKYIATGVKNTAALTEWGELYMWGINEHGELGL-GDTIDRRTPTRVI-RL 463
Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
K+ + IAC S H A + ++Y WG+ G + +P + + D+++KS
Sbjct: 464 KNEVVSTIACSSTHSACYTESGKMYVWGQSDET----GKIQAIPSPLPIHSYLDREIKS 518
Score = 90 (36.7 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
LE++ + + +A G+ H VL+T+ G +++WG S G+LG+ V+
Sbjct: 327 LENSPLNTIKQVALGNYHIVLLTEGGNVWTWGSNSNGQLGYLVD 370
Score = 80 (33.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYP--KLIDALN--GSNIHMVACGEFHTCAVTLSGDLYTW 372
+F++G GS G LG G D + P + ++ + VACG +HT VT LY
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 373 G 373
G
Sbjct: 63 G 63
Score = 74 (31.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 424 LFTFGDGTFGALGHGDRSSTS--VPREVETLKEL-KTVM-ASCGVWHTAAIVE 472
+FTFG G+ GALG G + + P++V E+ K V +CG +HT + +
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTD 55
Score = 70 (29.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 369 LYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQME-GLQISSICCGPWHTAAITSAGKLFT 426
++T+G G + LGL G++++ + P+KV+ E ++ + CG +HT +T L+
Sbjct: 3 VFTFGHGSNGALGL-GKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYI 61
Query: 427 FG 428
G
Sbjct: 62 CG 63
Score = 63 (27.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSD----DISFCKVACGHSITIALTATGQVFSM 543
+FT+G G+ G LG G P KV+ D KVACG T+ +T ++
Sbjct: 3 VFTFGHGSNGALGLGKITDDTCPTPQKVNYFTEIDKRVKKVACGSYHTVFVTDDEHLYIC 62
Query: 544 G 544
G
Sbjct: 63 G 63
Score = 50 (22.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWG 321
+ +ACGS H V VT ++ G
Sbjct: 41 KKVACGSYHTVFVTDDEHLYICG 63
>UNIPROTKB|C9J3R0 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341
IPI:IPI00926548 ProteinModelPortal:C9J3R0 SMR:C9J3R0 STRING:C9J3R0
PRIDE:C9J3R0 Ensembl:ENST00000434290 ArrayExpress:C9J3R0
Bgee:C9J3R0 Uniprot:C9J3R0
Length = 273
Score = 129 (50.5 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 36/120 (30%), Positives = 64/120 (53%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ ++ G HT ++ SG +Y
Sbjct: 40 TEPGLVLTLGQGDVGQLGLGENVMERKKPALVSI--PEDVVQAEAGGMHTVCLSKSGQVY 97
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 98 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTDDGRVFLWG 152
Score = 126 (49.4 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 34/113 (30%), Positives = 56/113 (49%)
Query: 488 LFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+ T G G GQLG G+ R P V + +D+ + G T+ L+ +GQV+S G
Sbjct: 45 VLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTVCLSKSGQVYSFGCN 102
Query: 547 DYGQLGSPGST-GK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
D G LG S G P ++E ++ + ++ ++ G H A ++ V+ WG
Sbjct: 103 DEGALGRDTSVEGSEMVPGKVE--LQEKVVQ-VSAGDSHTAALTDDGRVFLWG 152
Score = 108 (43.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 30/102 (29%), Positives = 47/102 (46%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVS 337
+R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 64 ERKKPALVSIPEDVVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSEM 118
Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
P ++ + V+ G+ HT A+T G ++ WG H L
Sbjct: 119 VPGKVELQE--KVVQVSAGDSHTAALTDDGRVFLWGSFRHCL 158
Score = 105 (42.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 40/117 (34%), Positives = 56/117 (47%)
Query: 359 HTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
H T G + T G G + LGL V E P VS + +Q + G HT
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKK--PALVSIPEDVVQAEA---GGMHTVC 89
Query: 418 ITSAGKLFTFGDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
++ +G++++FG GALG S VP +VE L+E K V S G HTAA+ +
Sbjct: 90 LSKSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVE-LQE-KVVQVSAGDSHTAALTD 144
Score = 95 (38.5 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 38/134 (28%), Positives = 60/134 (44%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H + T G + T G G G LG G+ + ++ E V A G HT + +
Sbjct: 35 HRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIPE-DVVQAEAGGMHTVCLSK- 92
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSIT 531
SG +++++G EG LG + +VP V++ + + +V+ G S T
Sbjct: 93 ----SG-------QVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKV--VQVSAGDSHT 139
Query: 532 IALTATGQVFSMGS 545
ALT G+VF GS
Sbjct: 140 AALTDDGRVFLWGS 153
Score = 89 (36.4 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
GK GLS ++ +G G L + +VP V+V D+ KVA G+ + L
Sbjct: 168 GKEVWRQGLSHLRVSKDNNGVIGLLE--PMKKSMVP--VQVQLDVPVVKVASGNDHLVML 223
Query: 535 TATGQVFSMGSADYGQLG 552
TA G ++++G + GQLG
Sbjct: 224 TADGDLYTLGCGEQGQLG 241
Score = 66 (28.3 bits), Expect = 9.9e-08, Sum P(2) = 9.9e-08
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 549 GQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
G +G P P +++ ++ + +A G+ H+ ++++ ++YT G G GQLG
Sbjct: 187 GVIGLLEPMKKSMVPVQVQLDVP---VVKVASGNDHLVMLTADGDLYTLGCGEQGQLG 241
>UNIPROTKB|E9PS70 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
PANTHER:PTHR22870:SF7 HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058
EMBL:AC124078 IPI:IPI00985461 ProteinModelPortal:E9PS70 SMR:E9PS70
Ensembl:ENST00000532389 ArrayExpress:E9PS70 Bgee:E9PS70
Uniprot:E9PS70
Length = 137
Score = 150 (57.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 41/134 (30%), Positives = 68/134 (50%)
Query: 310 LVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
++T+ GQ+ S G S G+LG HG V P+ I+ L+ + +A G H A T SG
Sbjct: 1 MLTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIE-LHKEKVVCIAAGLRHAVAATASG 58
Query: 368 DLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICC---GPWHTAAITSAGK 423
++ WG G+ + G L + + K ++ GL+ S C G H+A++T AG+
Sbjct: 59 IVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASLTDAGE 118
Query: 424 LFTFGDGTFGALGH 437
++ +G G L +
Sbjct: 119 VYVWGSNKHGQLAN 132
Score = 136 (52.9 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 43/131 (32%), Positives = 66/131 (50%)
Query: 487 KLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
++ + G + GQLG HG PR VVP +++ + C +A G +A TA+G VF
Sbjct: 7 QVLSCGSNSFGQLGVPHG---PRRCVVPQAIELHKEKVVC-IAAGLRHAVAATASGIVFQ 62
Query: 543 MGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+ A G+ PG T K P+R+ G +++ + GS H A ++ EVY
Sbjct: 63 WGTGLASCGRRLCPGQTLPLFFTAKEPSRVTG-LENSKAMCVLAGSDHSASLTDAGEVYV 121
Query: 595 WGKGANGQLGH 605
WG +GQL +
Sbjct: 122 WGSNKHGQLAN 132
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 27/84 (32%), Positives = 39/84 (46%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEG---SGGKLGHGVEADVSY----PKLIDALNGSNIHMV 353
IA G +HAV T G +F WG G G +L G + + P + L S V
Sbjct: 44 IAAGLRHAVAATASGIVFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCV 103
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIH 377
G H+ ++T +G++Y WG H
Sbjct: 104 LAGSDHSASLTDAGEVYVWGSNKH 127
Score = 101 (40.6 bits), Expect = 0.00030, P = 0.00030
Identities = 42/146 (28%), Positives = 62/146 (42%)
Query: 418 ITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+T G++ + G +FG LG HG R VP+ +E KE K V + G+ H VA
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCV-VPQAIELHKE-KVVCIAAGLRHA-----VAA 54
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD-----ISFCKVAC---G 527
SG +F WG G G + +PL + + K C G
Sbjct: 55 TASGI-------VFQWGTGL-ASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAG 106
Query: 528 HSITIALTATGQVFSMGSADYGQLGS 553
+ +LT G+V+ GS +GQL +
Sbjct: 107 SDHSASLTDAGEVYVWGSNKHGQLAN 132
Score = 99 (39.9 bits), Expect = 0.0010, P = 0.0010
Identities = 34/114 (29%), Positives = 52/114 (45%)
Query: 534 LTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
LT GQV S GS +GQLG P + P IE + K + + IA G H ++
Sbjct: 2 LTENGQVLSCGSNSFGQLGVPHGPRRCVVPQAIELH-KEKVV-CIAAGLRHAVAATASGI 59
Query: 592 VYTWGKG---ANGQLGHGDNE----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
V+ WG G +L G + P+ V L + + V+ GS+ +A++
Sbjct: 60 VFQWGTGLASCGRRLCPGQTLPLFFTAKEPSRVTGLENSKAMCVLAGSDHSASL 113
>WB|WBGene00012370 [details] [associations]
symbol:W09G3.7 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0045132 PRINTS:PR00633
PROSITE:PS50012 EMBL:AL032625 GeneTree:ENSGT00700000104312
EMBL:Z82080 EMBL:AL023854 RefSeq:NP_001021671.2
ProteinModelPortal:G5EEZ1 SMR:G5EEZ1 PRIDE:G5EEZ1
EnsemblMetazoa:W09G3.7a GeneID:173245 KEGG:cel:CELE_W09G3.7
CTD:173245 WormBase:W09G3.7a OMA:RKKVDCA NextBio:878861
Uniprot:G5EEZ1
Length = 404
Score = 168 (64.2 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 85/325 (26%), Positives = 144/325 (44%)
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIP 393
+ +PK I N +I ++ G F LY G GI+N + GQ++ I+ +
Sbjct: 53 EARFPKRIAYFNTKSIKFISSG-FGFSLFASKNRLY--GAGINNRFQIGGQLTNINKYQD 109
Query: 394 RKVSGQ---MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH---------GDRS 441
+S + + G +I I G H+ T+ G +F GD FG G G
Sbjct: 110 YYISAKKINIPGDEILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEE 168
Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
S +P T + + ++ C + T+ +V+ SS +F++G +GQ G+
Sbjct: 169 SPLLPLSFPTSEPIISI--HCSM-DTSFVVD-----------SSGAVFSFGLNEDGQCGN 214
Query: 502 GDAEPRVVPLCVKVSDDISFCKV--ACGHSITI-ALTATGQVFSMGSADYGQLGSPGSTG 558
+ P KV D+ K+ G + T+ A + G++F G +YGQ + G+T
Sbjct: 215 EAYGIQWEP--AKVRGDVEGSKIQKVSGSTDTLLACSENGEIFIWGQTEYGQ--AAGATD 270
Query: 559 KFPTRIEGNIKHRYIEDIACGSYHIAVVS--SKSEVYTWGKGANGQLGHG-DNENKQTPT 615
+ ++ + I S +VV+ S+ V+ WG G LG G + E+ +TPT
Sbjct: 271 EIQLNTSRHVANSLGPIICVDSTQSSVVARNSRGNVFVWGVGV---LGMGPEAESLKTPT 327
Query: 616 LVEA-LRD-KQVKSVVCGSNFTAAI 638
++ L D K V SV G++ +AI
Sbjct: 328 QMDQPLFDGKMVTSVSAGNSCMSAI 352
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 68/264 (25%), Positives = 112/264 (42%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-------PKL-IDALNGSNIHM 352
I+ G H+++ T G +F+ G+ + G+ G E ++ Y P L + I
Sbjct: 127 ISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPE-NMDYVVGSEESPLLPLSFPTSEPIIS 184
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
+ C + V SG ++++G ++ G G + W P KV G +EG +I +
Sbjct: 185 IHCSMDTSFVVDSSGAVFSFG--LNEDGQCGNEAYGIQWEPAKVRGDVEGSKIQKVSGST 242
Query: 413 WHTAAITSAGKLFTFGDGTFG-ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
A + G++F +G +G A G D + R V L ++ C V T + V
Sbjct: 243 DTLLACSENGEIFIWGQTEYGQAAGATDEIQLNTSRHVAN--SLGPII--C-VDSTQSSV 297
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVK--VSDDISFCKVACGH 528
VA + G+ +F WG G LG G +AE P + + D V+ G+
Sbjct: 298 -VARNSRGN-------VFVWGVGV---LGMGPEAESLKTPTQMDQPLFDGKMVTSVSAGN 346
Query: 529 SITIALTATGQVFSMGSADYGQLG 552
S A+ G++F G Y LG
Sbjct: 347 SCMSAINEDGRLFIWGENRYSSLG 370
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 156 (60.0 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 42/117 (35%), Positives = 59/117 (50%)
Query: 492 GDGAEGQLGHGDAEPRVVPLC---VKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
G GA PRV PL ++++ +VACG T+ LT G+V++ GS Y
Sbjct: 936 GGGAATPTDLDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEVYTFGSNQY 995
Query: 549 GQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
GQLGS P R++ + I +A GS H +++SK VYT+G GQLG
Sbjct: 996 GQLGSGDLQPVSGPVRVQ--VPGA-ISQVAAGSNHTVLLTSKGMVYTFGNYQKGQLG 1049
Score = 136 (52.9 bits), Expect = 6.3e-06, Sum P(4) = 6.3e-06
Identities = 59/210 (28%), Positives = 95/210 (45%)
Query: 440 RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
R + P+ ++ V +CG+ HT ++ +AG+ ++T+G GQL
Sbjct: 951 RVAPLAPQLLQLTSSSPVVQVACGLHHTV-VLTLAGE-----------VYTFGSNQYGQL 998
Query: 500 GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS-PGSTG 558
G GD +P P+ V+V IS +VA G + T+ LT+ G V++ G+ GQLG P G
Sbjct: 999 GSGDLQPVSGPVRVQVPGAIS--QVAAGSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYG 1056
Query: 559 -KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
K P + + + + A GS +A V + AN Q + +K+ P L+
Sbjct: 1057 LKPPPQDDDSPVGAGSDGGAGGSPTVAPVGMPGPERSQSP-ANVQ----PSGSKEMPPLL 1111
Query: 618 EALRDKQVKSVVC--GSNFTAAICLHKGVS 645
L +Q C G+ F C K V+
Sbjct: 1112 PVLTQRQKFLWNCSPGAVFGLGPCYGKKVT 1141
Score = 94 (38.1 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGV----EADVSYPKLIDALNGSNIHMVACGEFHTCA 362
HA+LV G +F G G+ G + PK + ++G + AC +
Sbjct: 662 HALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKPKKMTKIDGHVVVHAACNNGTSAF 721
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
VT +G L +G + +G VSE+ +E ++ + G H A+ + G
Sbjct: 722 VTKTGKLIMYGKDTAHCDAMGFVSEL-----------LEQ-HVTKVALGKAHCVALNAKG 769
Query: 423 KLFTFGDGTFGALG 436
+LF+FG G G
Sbjct: 770 QLFSFGLNNKGQCG 783
Score = 77 (32.2 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSG-GKLGHGVEADVSYPKLIDALNGSNIHMVA 354
+D +ACG + ++ G+++ +G+ + G G + +L+ + +NI VA
Sbjct: 597 VDVMGMACGKEFGLVRASNGRVYYYGKSAALGLKCVGRTPTLKLTELVIS-KAANIVHVA 655
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI----PRKVSGQMEGLQISSICC 410
G A+ ++ D + G G G S+ P+K++ +++G + C
Sbjct: 656 VGHDGIHALLVNDDGTVFFAGTARRGEDGDSSKNRRQPKAVKPKKMT-KIDGHVVVHAAC 714
Query: 411 GPWHTAAITSAGKLFTFGDGT 431
+A +T GKL +G T
Sbjct: 715 NNGTSAFVTKTGKLIMYGKDT 735
Score = 61 (26.5 bits), Expect = 9.4e-05, Sum P(4) = 9.4e-05
Identities = 11/29 (37%), Positives = 18/29 (62%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLG 329
+A G H V + +GQ+FS+G + G+ G
Sbjct: 755 VALGKAHCVALNAKGQLFSFGLNNKGQCG 783
Score = 44 (20.5 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 678 LCSSKKSMKTALAPEINKPYRVCDDC--FIKLNTTSES 713
LCS+ +TA + +C DC F+ LN + S
Sbjct: 4810 LCSNHDDGETAAIIQCETCGSLCGDCDRFLHLNRKTRS 4847
Score = 37 (18.1 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 20 VLKK-GTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
V+KK Y Y P P +L+ + + YA E++ L + RI
Sbjct: 527 VVKKLNLYHNSYNIDPPPFELPLQLARKKFRTLGYAAFEDELLNQYQIQRI 577
Score = 37 (18.1 bits), Expect = 2.9e-07, Sum P(4) = 2.9e-07
Identities = 18/62 (29%), Positives = 24/62 (38%)
Query: 671 CGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNC 730
CG V+ C K P I + +C C K + S+ P N GL Q+
Sbjct: 5009 CGHVFHYHCCKAVLEKRWSGPRITFGFSLCPIC--KADIQHPLLSDILEPIN--GLKQDV 5064
Query: 731 KR 732
KR
Sbjct: 5065 KR 5066
>WB|WBGene00021461 [details] [associations]
symbol:nekl-1 species:6239 "Caenorhabditis elegans"
[GO:0004672 "protein kinase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 EMBL:FO081209
KO:K08857 GeneTree:ENSGT00700000104137 RefSeq:NP_490968.2
ProteinModelPortal:Q6AW07 SMR:Q6AW07 EnsemblMetazoa:Y39G10AR.3
GeneID:189769 KEGG:cel:CELE_Y39G10AR.3 UCSC:Y39G10AR.3 CTD:189769
WormBase:Y39G10AR.3 HOGENOM:HOG000017263 InParanoid:Q6AW07
OMA:RNDNTEL NextBio:943564 Uniprot:Q6AW07
Length = 998
Score = 172 (65.6 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 76/322 (23%), Positives = 130/322 (40%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
+ + +A H +++T ++F +G+ S G+LG G + + +L+++L G +I V
Sbjct: 467 ISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGFGKFSKMENGRLVESLKGRDIQSVGV 526
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
G + + G L T+G NLGL G+ ++ S P + Q+ I I CG H
Sbjct: 527 GNYFSVICCDRGTLLTFGTA-KNLGL-GKDAKDSAK-PMLLE-QLLRENIKDIYCGHDHV 582
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV---WHTAAIVE 472
A+ +G+ +G +G LG P +V L E + + + +
Sbjct: 583 VAVLESGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKIVYG 642
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQL------GHGDAEPRVV------PLCVKVSDD-- 518
AGK + L G +L G E + P ++ +
Sbjct: 643 KAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQGFPERV 702
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK---HRYIED 575
+ F V HS I +GQV G D +LG G++ K R +K H
Sbjct: 703 VDF-SVGSYHSGVIL--ESGQVMIFGRNDNTELGL-GNSQKMAVRCVKPVKSLLHHACTH 758
Query: 576 IACGSYHIAVVSSKSEVYTWGK 597
+ CG V +++ E+Y WG+
Sbjct: 759 VLCGDGFTLVSTTEQELYFWGR 780
Score = 169 (64.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 78/309 (25%), Positives = 132/309 (42%)
Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
+I VA + HT +T +L+ +GD ++ G LG + S ++ ++G I S+
Sbjct: 468 SIKQVALSKTHTMVLTNDNELFGFGD--NSCGQLG-FGKFSKMENGRLVESLKGRDIQSV 524
Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETL--KELKTVMASCGVW 465
G + + G L TFG T LG G D ++ P +E L + +K + CG
Sbjct: 525 GVGNYFSVICCDRGTLLTFG--TAKNLGLGKDAKDSAKPMLLEQLLRENIKDIY--CGHD 580
Query: 466 HTAAIVEVAGKTSG--SNGLSSKKLFTWGDG-AEGQLGH-GDAEPRVVPLCVKVSDDISF 521
H A++E +G+ G SN L T A ++ +A P + + +
Sbjct: 581 HVVAVLE-SGECLGWGSNQYGQLGLPTLEHFFAPTKVFFLNEATALYGPFQIPMPSNKKI 639
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-------------PTRIEGNI 568
G T+ L+ G + +MGS + +L G F PT ++G
Sbjct: 640 VYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTPNDYVNKPTILQG-F 698
Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL--VEALRDKQVK 626
R + D + GSYH V+ +V +G+ N +LG G+++ + V++L
Sbjct: 699 PERVV-DFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVRCVKPVKSLLHHACT 757
Query: 627 SVVCGSNFT 635
V+CG FT
Sbjct: 758 HVLCGDGFT 766
Score = 139 (54.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 70/278 (25%), Positives = 115/278 (41%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALN 346
+++ES D QS+ G+ +V+ +G + ++G LG G +A D + P L++ L
Sbjct: 511 RLVESLKGRDIQSVGVGNYFSVICCDRGTLLTFGTAKN--LGLGKDAKDSAKPMLLEQLL 568
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-PRKVSGQMEGLQI 405
NI + CG H AV SG+ WG + G LG + + H+ P KV E +
Sbjct: 569 RENIKDIYCGHDHVVAVLESGECLGWGS--NQYGQLG-LPTLEHFFAPTKVFFLNEATAL 625
Query: 406 SSICCGPWHT---AAITSAGKLFTF---GDGTFGALGHGDRSSTSVPREVETL-KELKTV 458
P + AGK T DG+ A+G + ++ + V KE KT
Sbjct: 626 YGPFQIPMPSNKKIVYGKAGKDATMLLSDDGSLIAMGSNKHNKLNLTQRVGFFTKEKKTP 685
Query: 459 -----MASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
+ +V+ + G L S ++ +G +LG G+++ V C
Sbjct: 686 NDYVNKPTILQGFPERVVDFSVGSYHSGVILESGQVMIFGRNDNTELGLGNSQKMAVR-C 744
Query: 513 VKVSDDISF--CK-VACGHSITIALTATGQVFSMGSAD 547
VK + C V CG T+ T +++ G D
Sbjct: 745 VKPVKSLLHHACTHVLCGDGFTLVSTTEQELYFWGRKD 782
Score = 136 (52.9 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 37/126 (29%), Positives = 60/126 (47%)
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIA 577
IS +VA + T+ LT ++F G GQLG G K R+ ++K R I+ +
Sbjct: 467 ISIKQVALSKTHTMVLTNDNELFGFGDNSCGQLGF-GKFSKMENGRLVESLKGRDIQSVG 525
Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G+Y + + + T+G N LG D ++ P L+E L + +K + CG + A
Sbjct: 526 VGNYFSVICCDRGTLLTFGTAKNLGLGK-DAKDSAKPMLLEQLLRENIKDIYCGHDHVVA 584
Query: 638 ICLHKG 643
+ L G
Sbjct: 585 V-LESG 589
Score = 40 (19.1 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
Identities = 22/83 (26%), Positives = 41/83 (49%)
Query: 792 RAPSPISRK----SSPACSI-TMNSFT--DLANSEVI-FEYSKQTNDNFNQEPDVLRAQL 843
R PS ++ + S+PA + T +++ + +E+I + SK+ F+ + L+ +
Sbjct: 857 RLPSALAERCRSGSAPAINDETTHTWLREEFEKAEIIPIDASKR-RVRFDDSCEKLK--I 913
Query: 844 EDLTRKSQFLEVELERTSRKLKE 866
D T K L E+E K+KE
Sbjct: 914 MDATAKQNSLLREIEDLKSKIKE 936
>WB|WBGene00017190 [details] [associations]
symbol:F07B7.12 species:6239 "Caenorhabditis elegans"
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR027047
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005 EMBL:FO081059
GeneTree:ENSGT00390000011403 KO:K10693 PANTHER:PTHR12846
eggNOG:NOG240798 RefSeq:NP_505281.1 ProteinModelPortal:Q965Y9
SMR:Q965Y9 STRING:Q965Y9 PaxDb:Q965Y9 EnsemblMetazoa:F07B7.12
GeneID:184118 KEGG:cel:CELE_F07B7.12 UCSC:F07B7.12 CTD:184118
WormBase:F07B7.12 InParanoid:Q965Y9 OMA:KESRITH NextBio:923582
Uniprot:Q965Y9
Length = 1900
Score = 163 (62.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 69/259 (26%), Positives = 111/259 (42%)
Query: 390 HWIPRKVSGQM-EGLQ---ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-S 444
H + VS QM GL ISS+ G H A+T G LFT+G G + +ST S
Sbjct: 596 HTMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTS 655
Query: 445 VPREVETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH- 501
PR +E + W T ++ G S + G++ ++ +G + H
Sbjct: 656 SPRH-SGRQEYQICPIGEHTWLTDTPSVCAQCGLCS-ARGVACGRV----PRPKGTMCHC 709
Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
G E C++ C+ CG +T Q + +P + P
Sbjct: 710 GVGEST----CLRCG----LCR-PCGE-----VTEPAQPGRAQHVQFSSTAAPQRSTLHP 755
Query: 562 TRI---EG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
+R+ +G ++K + ++CG++H +++S V+T+G +GQLG GD +K TP
Sbjct: 756 SRVILSQGPHDVK---VSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQ 812
Query: 617 VEALRDKQVKSVVCGSNFT 635
V D + V GSN T
Sbjct: 813 VILPSDTVIVQVAAGSNHT 831
Score = 122 (48.0 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 38/123 (30%), Positives = 56/123 (45%)
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTW 491
G H SST+ P+ TL + +++ G H + V+ G S +++FT+
Sbjct: 735 GRAQHVQFSSTAAPQR-STLHPSRVILSQ-GP-HDVKVSSVSCGNFHTVLLASDRRVFTF 791
Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
G GQLG GD + P V + D +VA G + TI G VF+ G+ GQL
Sbjct: 792 GSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQL 851
Query: 552 GSP 554
P
Sbjct: 852 ARP 854
Score = 108 (43.1 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 303 CGSKHAV-LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
C S H V++ G+IF GG H + +VS ++++ L+ I +A G+ H
Sbjct: 575 CASGHVYGYVSENGKIFM-----GGL--HTMRVNVS-SQMLNGLDNVMISSLALGKSHGV 626
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
AVT +G L+TWG ++N+ G+V S + SG+ E QI I W T
Sbjct: 627 AVTRNGHLFTWG--LNNMNQCGRVESTSTTSSPRHSGRQE-YQICPIGEHTWLT 677
Score = 103 (41.3 bits), Expect = 7.6e-06, Sum P(3) = 7.6e-06
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
D+ V+CG+ T+ L + +VF+ GS +GQLG + K + I +A
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVA 825
Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
GS H + ++ V+T+G GQL E
Sbjct: 826 AGSNHTILRANDGSVFTFGAFGKGQLARPAGE 857
Score = 71 (30.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
S+A G H V VT+ G +F+WG + + G VE+
Sbjct: 617 SLALGKSHGVAVTRNGHLFTWGLNNMNQCGR-VES 650
Score = 38 (18.4 bits), Expect = 8.7e-08, Sum P(3) = 8.7e-08
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 281 RRDALLPKVL-ESTVVLDAQSIACG 304
R DA P V ++T L A S+ACG
Sbjct: 202 REDAC-PSVSSKATSCLVALSVACG 225
>WB|WBGene00004304 [details] [associations]
symbol:ran-3 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0009792 GO:GO:0040010
GO:GO:0007067 GO:GO:0007052 GO:GO:0002119 GO:GO:0016246
GO:GO:0000910 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 GO:GO:0040035 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 EMBL:Z54327
GeneTree:ENSGT00700000104160 PIR:T19483 RefSeq:NP_495753.1
ProteinModelPortal:Q18211 SMR:Q18211 IntAct:Q18211 STRING:Q18211
PaxDb:Q18211 EnsemblMetazoa:C26D10.1.1 EnsemblMetazoa:C26D10.1.2
GeneID:174332 KEGG:cel:CELE_C26D10.1 UCSC:C26D10.1 CTD:174332
WormBase:C26D10.1 HOGENOM:HOG000016067 InParanoid:Q18211
OMA:TEPNDVE NextBio:883582 Uniprot:Q18211
Length = 569
Score = 132 (51.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 46/165 (27%), Positives = 75/165 (45%)
Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL-GHGVEADVS---YPKLI-- 342
+ E + Q++A G H+ ++T +G+++ G G + GVE + S + K+
Sbjct: 179 IFEEEGLKPLQAVA-GGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFE 237
Query: 343 -DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI---PRKVSG 398
D I M+A G T A+T G + WG+ ++ G + V + H + P +
Sbjct: 238 EDIEKEGKIVMLAAGASFTAALTDQGSVIAWGNLRNSNGNV-DVHPLLHKMQEAPVVIVH 296
Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
Q + +I I G H + G L TFGDG G LG R+ T
Sbjct: 297 QAKR-KIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRTKT 340
Score = 131 (51.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 56/193 (29%), Positives = 87/193 (45%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGS 480
++ + G+G ALGH R++T PR+V+ +E LK + A G H+A + G+
Sbjct: 153 RVLSCGEGE--ALGHPGRTTTKKPRKVDIFEEEGLKPLQAVAGGVHSAVLTS-EGEVYMC 209
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS----FCKVACGHSITIALTA 536
G++ K +G E + G D +V K +DI +A G S T ALT
Sbjct: 210 -GINEKGTVP-AEGVEKE-GSTDEFAKV-----KFEEDIEKEGKIVMLAAGASFTAALTD 261
Query: 537 TGQVFSMGSA--DYGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
G V + G+ G + K P I K + ++ IA G H+ ++ K
Sbjct: 262 QGSVIAWGNLRNSNGNVDVHPLLHKMQEAPVVIVHQAKRKIVK-IAAGENHLVMLDEKGC 320
Query: 592 VYTWGKGANGQLG 604
+ T+G G GQLG
Sbjct: 321 LLTFGDGEMGQLG 333
Score = 117 (46.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 74/290 (25%), Positives = 115/290 (39%)
Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
R A PK L ST A+S AV K+G+ E + + + ++ PK
Sbjct: 75 RRAGRPKKLPSTSTAAAES-------AVTPGKRGRKRKGSESVNTTINSTMNSTLNEPKT 127
Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGD-LYTWGDGIHNLGLLGQVSEISHWIPRKVS-GQ 399
+ + + A ++ GD + + G+G LG G+ + PRKV +
Sbjct: 128 PGRKQAKLVAPLLT--YDLFAPSIIGDRVLSCGEG-EALGHPGRTTTKK---PRKVDIFE 181
Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFG---DGTFGALGHGDRSSTS----VPREVETL 452
EGL+ G H+A +TS G+++ G GT A G ST V E +
Sbjct: 182 EEGLKPLQAVAGGVHSAVLTSEGEVYMCGINEKGTVPAEGVEKEGSTDEFAKVKFEEDIE 241
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV---- 508
KE K VM + G TAA+ + GS + WG+ G+ D P +
Sbjct: 242 KEGKIVMLAAGASFTAALTD-----QGS-------VIAWGN-LRNSNGNVDVHPLLHKMQ 288
Query: 509 -VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
P+ + K+A G + + L G + + G + GQLG T
Sbjct: 289 EAPVVIVHQAKRKIVKIAAGENHLVMLDEKGCLLTFGDGEMGQLGRSSRT 338
Score = 72 (30.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 49/168 (29%), Positives = 70/168 (41%)
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSS-KKLFTWGDGAE-GQLGHGDAEPRV-VPL- 511
K V AS G W IV + GL++ +L D A+ GQ G + E RV +P
Sbjct: 372 KNVFAS-GFW---TIVHGEDGKYYAFGLNNYAQLGIKVDEADVGQDGQDNRELRVFLPAE 427
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTR--IEGNIK 569
+ +F + G + L + G+VF+MG LG TGK + + I+
Sbjct: 428 APAFGAERTFVNIE-GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQ 486
Query: 570 HRYIEDIACG-SYHIAVVSSKSE---VYTWGKGANGQLGHG--DNENK 611
+ G S +A + SE Y WG GQLG G D + K
Sbjct: 487 EIEFDSKIVGVSAKLATSIAWSEDGTAYAWGFDTTGQLGLGLKDEDEK 534
Score = 60 (26.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 13/55 (23%), Positives = 28/55 (50%)
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGD--NENKQTPTLVEALRDKQVKSVVCG 631
G H+ ++ S +V+ GK + LG G+ ++ Q L + +++ + S + G
Sbjct: 442 GVQHVVILGSDGKVFAMGKNTDNALGLGNWTGKDDQQHWLYDTIQEIEFDSKIVG 496
>TAIR|locus:2036655 [details] [associations]
symbol:AT1G42680 species:3702 "Arabidopsis thaliana"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR001609
Pfam:PF00063 PRINTS:PR00193 SMART:SM00242 EMBL:CP002684
GO:GO:0005524 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0003774
GO:GO:0016459 IPI:IPI00526579 RefSeq:NP_174989.2 UniGene:At.52000
ProteinModelPortal:F4I9H4 SMR:F4I9H4 PRIDE:F4I9H4
EnsemblPlants:AT1G42680.1 GeneID:840876 KEGG:ath:AT1G42680
ArrayExpress:F4I9H4 Uniprot:F4I9H4
Length = 170
Score = 127 (49.8 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 46 DEKLLIWYAGKEEKQLKLSHVSRIIPGQRTAVF 78
DE L+WY+GKEEKQ+KLS V RI+PGQRT F
Sbjct: 21 DESALVWYSGKEEKQIKLSQVLRIVPGQRTISF 53
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 146 (56.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 66/270 (24%), Positives = 109/270 (40%)
Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS---------YPKLIDALNGSNIHMVACG 356
+HA ++T++G I+ WG G+LG G + S +P L++ G I +
Sbjct: 188 RHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLE--RGDRIVQLNFA 245
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM-----EGLQISSICCG 411
+ + A T G +Y WG + G LG E P ++S I + G
Sbjct: 246 DRYLVARTAQGHVYVWG--FNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVG 303
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
HT A+T G ++ +G ++G LG D+ + P + ++ I+
Sbjct: 304 DRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPW-NRFPGLLE-----RNDRII 357
Query: 472 E-VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS--------DDISFC 522
E +AG ++ WG A L GD E R P+ + + D
Sbjct: 358 ELIAGGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLRRRGD-HLV 414
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG 552
++ G T+A T G +++ G YGQLG
Sbjct: 415 ELIAGPDHTLARTEQGYIYAWGRNYYGQLG 444
Score = 135 (52.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 45/153 (29%), Positives = 69/153 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID-----AL---NGSNIHM 352
+ G +H + +T+ G I++WG+ S G+LG + D + P L+ L N I +
Sbjct: 300 VVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIEL 359
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-----ISS 407
+A G + A T G +Y WG L + G E H GL+ +
Sbjct: 360 IAGGA-RSLARTEQGFIYIWG--ARWLLVRGD-PEFRHHPMLLTENYFPGLRRRGDHLVE 415
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
+ GP HT A T G ++ +G +G LG GDR
Sbjct: 416 LIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDR 448
Score = 48 (22.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 786 GSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEP 836
G RR+ R P+ + + P S N+F+ + + E + D+F+ P
Sbjct: 446 GDRRIQRQPALLDPNAIPPLSQWRNAFSFIKSFR---EEKIEDTDSFSYAP 493
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 146 (56.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 66/270 (24%), Positives = 109/270 (40%)
Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS---------YPKLIDALNGSNIHMVACG 356
+HA ++T++G I+ WG G+LG G + S +P L++ G I +
Sbjct: 188 RHAFILTEEGGIYGWGFNISGELGLGDRFERSQPTELPQNFFPYLLE--RGDRIVQLNFA 245
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM-----EGLQISSICCG 411
+ + A T G +Y WG + G LG E P ++S I + G
Sbjct: 246 DRYLVARTAQGHVYVWG--FNYRGRLGLDDEQDRLHPVELSWDFFPEWHPDDYIIQVVVG 303
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
HT A+T G ++ +G ++G LG D+ + P + ++ I+
Sbjct: 304 DRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPW-NRFPGLLE-----RNDRII 357
Query: 472 E-VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS--------DDISFC 522
E +AG ++ WG A L GD E R P+ + + D
Sbjct: 358 ELIAGGARSLARTEQGFIYIWG--ARWLLVRGDPEFRHHPMLLTENYFPGLRRRGD-HLV 414
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG 552
++ G T+A T G +++ G YGQLG
Sbjct: 415 ELIAGPDHTLARTEQGYIYAWGRNYYGQLG 444
Score = 135 (52.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 45/153 (29%), Positives = 69/153 (45%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID-----AL---NGSNIHM 352
+ G +H + +T+ G I++WG+ S G+LG + D + P L+ L N I +
Sbjct: 300 VVVGDRHTLALTQLGYIYAWGKNSYGQLGFRDQQDRNRPALLPWNRFPGLLERNDRIIEL 359
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-----ISS 407
+A G + A T G +Y WG L + G E H GL+ +
Sbjct: 360 IAGGA-RSLARTEQGFIYIWG--ARWLLVRGD-PEFRHHPMLLTENYFPGLRRRGDHLVE 415
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
+ GP HT A T G ++ +G +G LG GDR
Sbjct: 416 LIAGPDHTLARTEQGYIYAWGRNYYGQLGLGDR 448
Score = 48 (22.0 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 786 GSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEP 836
G RR+ R P+ + + P S N+F+ + + E + D+F+ P
Sbjct: 446 GDRRIQRQPALLDPNAIPPLSQWRNAFSFIKSFR---EEKIEDTDSFSYAP 493
>UNIPROTKB|J3KQ33 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001726 "ruffle"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] [GO:0032313
"regulation of Rab GTPase activity" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AC007242
EMBL:AC007279 HGNC:HGNC:443 ChiTaRS:ALS2 PROSITE:PS50012
ProteinModelPortal:J3KQ33 Ensembl:ENST00000409632 Uniprot:J3KQ33
Length = 139
Score = 120 (47.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G KH VL+T+ G+++S+G + G VE S P L +AL G + VA G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGT-LPWRSGP-VEICPSSPILENALVGQYVITVATGSFHSG 104
Query: 362 AVTLSGDLYTWGD 374
AVT +G Y WG+
Sbjct: 105 AVTDNGVAYMWGE 117
>FB|FBgn0025381 [details] [associations]
symbol:rush "rush hour" species:7227 "Drosophila
melanogaster" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0006897 "endocytosis" evidence=IGI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0044448 "cell cortex part"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0005770 "late endosome" evidence=IDA] [GO:0007032
"endosome organization" evidence=IMP] [GO:0016324 "apical plasma
membrane" evidence=IDA] Pfam:PF00169 InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 PROSITE:PS50003 SMART:SM00064
SMART:SM00233 Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
GO:GO:0016324 EMBL:AE014298 GO:GO:0006897 GO:GO:0005770
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0008333
GO:GO:0035091 GO:GO:0007032 GO:GO:0005769
GeneTree:ENSGT00680000099588 GO:GO:0044448 HSSP:Q15075
EMBL:AL031027 eggNOG:NOG308864 OMA:INKCVSD EMBL:BT003610
EMBL:BT056254 PIR:T13601 RefSeq:NP_569923.2 UniGene:Dm.7010
SMR:O76902 DIP:DIP-21949N MINT:MINT-767382 STRING:O76902
EnsemblMetazoa:FBtr0070259 GeneID:31105 KEGG:dme:Dmel_CG14782
UCSC:CG14782-RA FlyBase:FBgn0025381 InParanoid:O76902
OrthoDB:EOG4BRV2C GenomeRNAi:31105 NextBio:771964 Uniprot:O76902
Length = 316
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 49/170 (28%), Positives = 69/170 (40%)
Query: 648 DHSICSGCXXXXXXXXXX-HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIK 706
D S+C C H+C NCG V C CS+KK + L + K RVCD C+ +
Sbjct: 154 DASVCMHCKKTQFTFIQRRHHCRNCGAVVCAGCSAKKFL---LPQQSTKALRVCDACYER 210
Query: 707 L-NTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGK 765
L + S GS + N T ++ N + + + P G+S H P G
Sbjct: 211 LKHVPSSLGSGEDSAAATGAASGNKLNTTAGDSSNDEDSDEETASPGGES-HDEPRFYGD 269
Query: 766 FQWEPNS--DFIKSNKISASPPGSRRVS-RAPSPI-SRKSSPACSITMNS 811
NS ++ + SP + S AP S +SSPA T S
Sbjct: 270 -----NSVLSAVEDSSTITSPSSATTGSLEAPQVTPSVQSSPAAVATTGS 314
>GENEDB_PFALCIPARUM|MAL7P1.38 [details] [associations]
symbol:MAL7P1.38 "regulator of chromosome
condensation protein, putative" species:5833 "Plasmodium
falciparum" [GO:0005634 "nucleus" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0030261 "chromosome
condensation" evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0003682
GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030261 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012
EMBL:AL844506 RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 109 (43.4 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH-----GVEADVSY-PKLIDALNGSNI 350
D + CGS H ++ T +++S+G G LG G++ D+ + P LI+ S I
Sbjct: 40 DIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIK-DLEHSPTLINFTFPSKI 98
Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
+ CG+ HT + +G +Y G G+LG
Sbjct: 99 KKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 91 (37.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ------VSEISHWIPRKVSGQME 401
++I V CG HT T LY++G +++G+LG+ + ++ H P ++
Sbjct: 39 NDIDEVICGSMHTIIKTTDDKLYSFG--CNDMGVLGRKTYSSGIKDLEH-SPTLINFTFP 95
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFG 428
+I I CG HTA + GK++ G
Sbjct: 96 S-KIKKITCGDNHTAILLENGKVYITG 121
Score = 85 (35.0 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACG-HSITIALTATGQV 540
+S ++ G A G G + ++ K+ + +S K+ CG S T+ L +
Sbjct: 280 NSLDVYGIGRNAYGSCGVSSKD-NIIKKFEKIQE-LSQKKINQLCGGQSFTVCLLNNNDL 337
Query: 541 FSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTWGKG 598
+ G+ + LG + P ++ K+ Y +++I CG+ H V++ +++ WG G
Sbjct: 338 YIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITCGTDHCLVLTDNGKLFGWGTG 395
Query: 599 AN 600
N
Sbjct: 396 GN 397
Score = 70 (29.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 38/143 (26%), Positives = 60/143 (41%)
Query: 517 DDISFCKVACGHSITIALTATGQ-VFSMGSAD--------YGQLGSPGSTGKFPTRIEGN 567
+DI + G I L + + +F+MG++D Y Q S K+ + N
Sbjct: 195 EDIKIINIISGEDHLICLDESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKY---VYPN 251
Query: 568 IKH-RYI------EDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNEN--KQTPTLV 617
H Y E+I CG + V S +VY G+ A G G +N K+ +
Sbjct: 252 CYHYTYFGFENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQ 311
Query: 618 EALRDKQVKSVVCGSNFTAAICL 640
E L K++ + G +FT +CL
Sbjct: 312 E-LSQKKINQLCGGQSFT--VCL 331
Score = 43 (20.2 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 30/97 (30%), Positives = 42/97 (43%)
Query: 710 TSESGSNSQIPRNSSGLFQNCKRVTE-KENMNSR--SATDGQS-KPKGKSYHASPSLNGK 765
++ES + Q PR S CK T EN N + D K K K+ + + N
Sbjct: 599 SNESPTRKQ-PRRS------CKEHTSLNENANKKFYQIIDKPIIKKKRKTTTSMKNKNTN 651
Query: 766 FQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSS 802
+ E S S K GSRR S + +PIS+K +
Sbjct: 652 LK-EAQSP---SGKRKVKSVGSRRESLS-APISKKDN 683
>UNIPROTKB|C0H4M6 [details] [associations]
symbol:MAL7P1.38 "Regulator of chromosome condensation,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007049 "cell cycle" evidence=ISS] [GO:0030261
"chromosome condensation" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0003682 GO:GO:0007049
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0030261
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS50012 EMBL:AL844506
RefSeq:XP_002808773.1 ProteinModelPortal:C0H4M6
EnsemblProtists:MAL7P1.38:mRNA GeneID:2655211 KEGG:pfa:MAL7P1.38
EuPathDB:PlasmoDB:PF3D7_0711500 HOGENOM:HOG000283921
ProtClustDB:CLSZ2431811 Uniprot:C0H4M6
Length = 687
Score = 109 (43.4 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 28/93 (30%), Positives = 46/93 (49%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH-----GVEADVSY-PKLIDALNGSNI 350
D + CGS H ++ T +++S+G G LG G++ D+ + P LI+ S I
Sbjct: 40 DIDEVICGSMHTIIKTTDDKLYSFGCNDMGVLGRKTYSSGIK-DLEHSPTLINFTFPSKI 98
Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
+ CG+ HT + +G +Y G G+LG
Sbjct: 99 KKITCGDNHTAILLENGKVYITGGFRDYCGVLG 131
Score = 91 (37.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ------VSEISHWIPRKVSGQME 401
++I V CG HT T LY++G +++G+LG+ + ++ H P ++
Sbjct: 39 NDIDEVICGSMHTIIKTTDDKLYSFG--CNDMGVLGRKTYSSGIKDLEH-SPTLINFTFP 95
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFG 428
+I I CG HTA + GK++ G
Sbjct: 96 S-KIKKITCGDNHTAILLENGKVYITG 121
Score = 85 (35.0 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 28/122 (22%), Positives = 56/122 (45%)
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--ACG-HSITIALTATGQV 540
+S ++ G A G G + ++ K+ + +S K+ CG S T+ L +
Sbjct: 280 NSLDVYGIGRNAYGSCGVSSKD-NIIKKFEKIQE-LSQKKINQLCGGQSFTVCLLNNNDL 337
Query: 541 FSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY-IEDIACGSYHIAVVSSKSEVYTWGKG 598
+ G+ + LG + P ++ K+ Y +++I CG+ H V++ +++ WG G
Sbjct: 338 YIWGNREI--LGMEYDDDAYSPLELDFFKKNNYTVKNITCGTDHCLVLTDNGKLFGWGTG 395
Query: 599 AN 600
N
Sbjct: 396 GN 397
Score = 70 (29.7 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 38/143 (26%), Positives = 60/143 (41%)
Query: 517 DDISFCKVACGHSITIALTATGQ-VFSMGSAD--------YGQLGSPGSTGKFPTRIEGN 567
+DI + G I L + + +F+MG++D Y Q S K+ + N
Sbjct: 195 EDIKIINIISGEDHLICLDESHEYIFTMGNSDSCQVCNNFYEQEDSEEQRIKY---VYPN 251
Query: 568 IKH-RYI------EDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNEN--KQTPTLV 617
H Y E+I CG + V S +VY G+ A G G +N K+ +
Sbjct: 252 CYHYTYFGFENKFENIYCGGNNTYVQLENSLDVYGIGRNAYGSCGVSSKDNIIKKFEKIQ 311
Query: 618 EALRDKQVKSVVCGSNFTAAICL 640
E L K++ + G +FT +CL
Sbjct: 312 E-LSQKKINQLCGGQSFT--VCL 331
Score = 43 (20.2 bits), Expect = 4.3e-06, Sum P(3) = 4.3e-06
Identities = 30/97 (30%), Positives = 42/97 (43%)
Query: 710 TSESGSNSQIPRNSSGLFQNCKRVTE-KENMNSR--SATDGQS-KPKGKSYHASPSLNGK 765
++ES + Q PR S CK T EN N + D K K K+ + + N
Sbjct: 599 SNESPTRKQ-PRRS------CKEHTSLNENANKKFYQIIDKPIIKKKRKTTTSMKNKNTN 651
Query: 766 FQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSS 802
+ E S S K GSRR S + +PIS+K +
Sbjct: 652 LK-EAQSP---SGKRKVKSVGSRRESLS-APISKKDN 683
>WB|WBGene00004457 [details] [associations]
symbol:rpm-1 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0050807 "regulation of synapse organization" evidence=IGI;IMP]
[GO:0040011 "locomotion" evidence=IGI] [GO:0043409 "negative
regulation of MAPK cascade" evidence=IGI] [GO:0031647 "regulation
of protein stability" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0031594
"neuromuscular junction" evidence=IDA] [GO:0045202 "synapse"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0031435 "mitogen-activated protein kinase kinase
kinase binding" evidence=IPI] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR027047 Pfam:PF00643 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518 GO:GO:0005634
GO:GO:0018991 GO:GO:0006915 GO:GO:0006355 GO:GO:0046872
GO:GO:0030424 GO:GO:0008270 GO:GO:0031594 GO:GO:0010171
GO:GO:0040011 GO:GO:0006351 GO:GO:0031647 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 GO:GO:0043409 InterPro:IPR012983 Pfam:PF08005
GO:GO:0050807 GeneTree:ENSGT00390000011403 KO:K10693
PANTHER:PTHR12846 eggNOG:NOG240798 EMBL:FO080217 PIR:T29165
RefSeq:NP_505267.1 ProteinModelPortal:Q17551 SMR:Q17551
STRING:Q17551 PaxDb:Q17551 EnsemblMetazoa:C01B7.6 GeneID:179259
KEGG:cel:CELE_C01B7.6 UCSC:C01B7.6 CTD:179259 WormBase:C01B7.6
HOGENOM:HOG000016145 InParanoid:Q17551 OMA:LLSILHW NextBio:904596
Uniprot:Q17551
Length = 3766
Score = 163 (62.4 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 69/259 (26%), Positives = 111/259 (42%)
Query: 390 HWIPRKVSGQM-EGLQ---ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-S 444
H + VS QM GL ISS+ G H A+T G LFT+G G + +ST S
Sbjct: 596 HTMRVNVSSQMLNGLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTS 655
Query: 445 VPREVETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH- 501
PR +E + W T ++ G S + G++ ++ +G + H
Sbjct: 656 SPRH-SGRQEYQICPIGEHTWLTDTPSVCAQCGLCS-ARGVACGRV----PRPKGTMCHC 709
Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
G E C++ C+ CG +T Q + +P + P
Sbjct: 710 GVGEST----CLRCG----LCR-PCGE-----VTEPAQPGRAQHVQFSSTAAPQRSTLHP 755
Query: 562 TRI---EG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
+R+ +G ++K + ++CG++H +++S V+T+G +GQLG GD +K TP
Sbjct: 756 SRVILSQGPHDVK---VSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQ 812
Query: 617 VEALRDKQVKSVVCGSNFT 635
V D + V GSN T
Sbjct: 813 VILPSDTVIVQVAAGSNHT 831
Score = 122 (48.0 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 38/123 (30%), Positives = 56/123 (45%)
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTW 491
G H SST+ P+ TL + +++ G H + V+ G S +++FT+
Sbjct: 735 GRAQHVQFSSTAAPQR-STLHPSRVILSQ-GP-HDVKVSSVSCGNFHTVLLASDRRVFTF 791
Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
G GQLG GD + P V + D +VA G + TI G VF+ G+ GQL
Sbjct: 792 GSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQL 851
Query: 552 GSP 554
P
Sbjct: 852 ARP 854
Score = 108 (43.1 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 37/114 (32%), Positives = 57/114 (50%)
Query: 303 CGSKHAV-LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
C S H V++ G+IF GG H + +VS ++++ L+ I +A G+ H
Sbjct: 575 CASGHVYGYVSENGKIFM-----GGL--HTMRVNVS-SQMLNGLDNVMISSLALGKSHGV 626
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
AVT +G L+TWG ++N+ G+V S + SG+ E QI I W T
Sbjct: 627 AVTRNGHLFTWG--LNNMNQCGRVESTSTTSSPRHSGRQE-YQICPIGEHTWLT 677
Score = 103 (41.3 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 27/92 (29%), Positives = 43/92 (46%)
Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
D+ V+CG+ T+ L + +VF+ GS +GQLG + K + I +A
Sbjct: 766 DVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTVIVQVA 825
Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
GS H + ++ V+T+G GQL E
Sbjct: 826 AGSNHTILRANDGSVFTFGAFGKGQLARPAGE 857
Score = 38 (18.4 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 281 RRDALLPKVL-ESTVVLDAQSIACG 304
R DA P V ++T L A S+ACG
Sbjct: 202 REDAC-PSVSSKATSCLVALSVACG 225
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 668 CYNCGLVYCKLC 679
C +C + CK C
Sbjct: 3350 CVDCDVALCKEC 3361
>UNIPROTKB|G4NDH5 [details] [associations]
symbol:MGG_00913 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] INTERPRO:IPR000408 EMBL:CM001235 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
RefSeq:XP_003718048.1 ProteinModelPortal:G4NDH5
EnsemblFungi:MGG_00913T0 GeneID:2674805 KEGG:mgr:MGG_00913
Uniprot:G4NDH5
Length = 578
Score = 128 (50.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 46/159 (28%), Positives = 73/159 (45%)
Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
V A + +G+ + + W ++ + + + P + KV D K H +
Sbjct: 214 VAQADQLAGAKATAKSGISLWTPSSDS-INYRELTPPKLGWGEKVVD----IKSGLDHCL 268
Query: 531 TIALTATGQVFSMGS--ADY---GQLGSPGST------GKF--PTRIEGNIKHRYIEDIA 577
LT+ G+VFS S A+Y GQLG PG T G F P ++G + + IA
Sbjct: 269 M--LTSHGRVFSAASSTANYPSKGQLGIPGLTWLTRPKGPFDQPHEVKG-LPPAGVSQIA 325
Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
G+YH + S ++ WG ++GQLG N Q+PT+
Sbjct: 326 AGNYHSLALDKNSNLHAWGDNSSGQLGF--EVNPQSPTI 362
Score = 59 (25.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 317 IFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+++WG SG + E + P I +G + + + AVT GD+ WG
Sbjct: 114 VYAWGSNSGKVVAPDSDEQIIKTPTRIPYFDGKILRDLKLDKNFGVAVTEEGDIVQWG 171
>CGD|CAL0001436 [details] [associations]
symbol:ATS1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] [GO:0007117 "budding cell
bud growth" evidence=IEA] INTERPRO:IPR000408 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000073 PRINTS:PR00633
PROSITE:PS00626 eggNOG:COG5184 KO:K15462 RefSeq:XP_716156.1
ProteinModelPortal:Q5A364 STRING:Q5A364 GeneID:3642213
KEGG:cal:CaO19.13757 CGD:CAL0062057 Uniprot:Q5A364
Length = 336
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSP-G-STGKFPTRIEGNIKHRYIEDIACGS 580
K+A G + T+ + G+VFS GS ++GQ G P G S G F ++ GN ++ DI+CG
Sbjct: 47 KIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFH-KVPGN---DWL-DISCGW 101
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD--KQVKS 627
+V EVY G+G G+LG G E ++ + D K++KS
Sbjct: 102 EFSILVKRSGEVYVCGRGLKGELGLG-KETPESELIYSTTVDGFKEIKS 149
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 55/225 (24%), Positives = 93/225 (41%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE---ADVSYPKLIDALNGSNIHMV 353
D I+CG + ++LV + G+++ G G G+LG G E +++ Y +D +
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVDGFK----EIK 148
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
+C + HT T +G L WG+ G LG+ + W P+ + G+ G
Sbjct: 149 SCMQ-HTIIQTTNG-LVGWGNS--RKGQLGETEDKIMWTPKTLRF---GVVCKDFSLGRE 201
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP-REVETLKELKTVMASCG------VWH 466
TA T ++ FG + + + + V L E V+ S G ++
Sbjct: 202 FTAIQTDTNRVKIFGKSSIKNIPESTVARVAAMWSSVHILSETN-VLQSFGNNSHDQLFP 260
Query: 467 TAAIVEVAGKTSGS-NGL--SSKKLFTWGDGAEGQLGHGDAEPRV 508
+ V V GS +GL S ++ WG G G +A +V
Sbjct: 261 NNSSVAVEEYAIGSEHGLVTSDNIVYAWGWSEHGNCGTSNASDKV 305
>UNIPROTKB|Q5A364 [details] [associations]
symbol:ATS1 "Putative uncharacterized protein ATS1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AACQ01000073 PRINTS:PR00633 PROSITE:PS00626 eggNOG:COG5184
KO:K15462 RefSeq:XP_716156.1 ProteinModelPortal:Q5A364
STRING:Q5A364 GeneID:3642213 KEGG:cal:CaO19.13757 CGD:CAL0062057
Uniprot:Q5A364
Length = 336
Score = 133 (51.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSP-G-STGKFPTRIEGNIKHRYIEDIACGS 580
K+A G + T+ + G+VFS GS ++GQ G P G S G F ++ GN ++ DI+CG
Sbjct: 47 KIAGGGNHTMVILDNGEVFSCGSNEFGQCGLPRGESLGVFH-KVPGN---DWL-DISCGW 101
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD--KQVKS 627
+V EVY G+G G+LG G E ++ + D K++KS
Sbjct: 102 EFSILVKRSGEVYVCGRGLKGELGLG-KETPESELIYSTTVDGFKEIKS 149
Score = 122 (48.0 bits), Expect = 0.00030, P = 0.00030
Identities = 55/225 (24%), Positives = 93/225 (41%)
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE---ADVSYPKLIDALNGSNIHMV 353
D I+CG + ++LV + G+++ G G G+LG G E +++ Y +D +
Sbjct: 93 DWLDISCGWEFSILVKRSGEVYVCGRGLKGELGLGKETPESELIYSTTVDGFK----EIK 148
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
+C + HT T +G L WG+ G LG+ + W P+ + G+ G
Sbjct: 149 SCMQ-HTIIQTTNG-LVGWGNS--RKGQLGETEDKIMWTPKTLRF---GVVCKDFSLGRE 201
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP-REVETLKELKTVMASCG------VWH 466
TA T ++ FG + + + + V L E V+ S G ++
Sbjct: 202 FTAIQTDTNRVKIFGKSSIKNIPESTVARVAAMWSSVHILSETN-VLQSFGNNSHDQLFP 260
Query: 467 TAAIVEVAGKTSGS-NGL--SSKKLFTWGDGAEGQLGHGDAEPRV 508
+ V V GS +GL S ++ WG G G +A +V
Sbjct: 261 NNSSVAVEEYAIGSEHGLVTSDNIVYAWGWSEHGNCGTSNASDKV 305
>ASPGD|ASPL0000075377 [details] [associations]
symbol:AN10609 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001303
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
EnsemblFungi:CADANIAT00005518 HOGENOM:HOG000197481 OMA:QRIECGR
Uniprot:C8V9T3
Length = 575
Score = 124 (48.7 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 60/222 (27%), Positives = 94/222 (42%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN-GSNIHMVACGEFHTCAV 363
SKH K+ + SW S GK + +SY + L G I ++ G H +
Sbjct: 212 SKHDQTSGKKAEEKSWLPFSSGK------SSMSYRLIQPILKLGEKIVAISGGLEHVLLL 265
Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEIS-HWI---PRKVSGQME-----GLQISSICCGPWH 414
T SG +++ N GQ+ W P V E G++++ I G +H
Sbjct: 266 TSSGRVFSAVSSTENFPSFGQLGVPGLTWATRPPGPVDAPHEVKTPNGVKVAQIATGDYH 325
Query: 415 TAAITSAGKLFTFGDGTFGALGHG-DRSS----TSVPREVETL-----KELKTVMASCGV 464
+ +T G + FGD +FG LG G D +S T P +E+L + + + G
Sbjct: 326 SLLLTKNGNVLAFGDNSFGQLGLGFDPNSPFLDTPTPILMESLYRDSSRSPRATGVAAGG 385
Query: 465 WHTAAIVEVA--GKTSGSNGLSS--KKLFTWGDGAEGQLGHG 502
++ V+V G+ GS S ++T G G G LG+G
Sbjct: 386 ANSFFTVDVHQDGQGQGSKSPSKVISDIWTCGRGIWGALGNG 427
Score = 59 (25.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 590 SEVYTWGKGANGQLGHGDNENKQT-PTLVEAL 620
S+++T G+G G LG+G + Q PTL++AL
Sbjct: 411 SDIWTCGRGIWGALGNGKWTHLQDHPTLLKAL 442
>UNIPROTKB|G4N5N9 [details] [associations]
symbol:MGG_05277 "Alpha-tubulin suppressor protein Aats1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CM001233 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 KO:K15462
RefSeq:XP_003712836.1 EnsemblFungi:MGG_05277T0 GeneID:2675298
KEGG:mgr:MGG_05277 Uniprot:G4N5N9
Length = 382
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 47/195 (24%), Positives = 85/195 (43%)
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALG----HGDRSSTSVPREVETLK-ELKTVM 459
+ + G HT +T G++++ GD GA G D + PR K +
Sbjct: 46 VVQVAAGGNHTLLLTQDGEIYSSGDPASGACGLKSATADSAGAGQPRPPVFHKIHVPAEQ 105
Query: 460 ASCGVWHTAAIVEVAGKTSGSN--GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
A+ A A +G + G +++++++G G++G+LG G RV P +++
Sbjct: 106 AAQSPGRLIAATWEASIITGPDEQGRRNRRVYSFGCGSKGELGQGPLIIRV-PFAQPIAN 164
Query: 518 ------DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR 571
++ GH +A+ + G V+ G+ GQLG+P P +IEG + +
Sbjct: 165 FPPPETEVVGLSACMGH--VVAVLSNGDVYGWGNGRKGQLGAPEGIITEPRKIEG-VPFK 221
Query: 572 YIEDIACGSYHIAVV 586
+ ACG +V
Sbjct: 222 -VAKAACGKEFTCLV 235
Score = 98 (39.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 31/104 (29%), Positives = 45/104 (43%)
Query: 539 QVFSMGSADYGQLGSPGSTGKFP-TRIEGNIKHRYIEDI---ACGSYHIAVVSSKSEVYT 594
+V+S G G+LG + P + N E + AC H+ V S +VY
Sbjct: 135 RVYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMG-HVVAVLSNGDVYG 193
Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
WG G GQLG + + P +E + K K+ CG FT +
Sbjct: 194 WGNGRKGQLGAPEGIITE-PRKIEGVPFKVAKAA-CGKEFTCLV 235
Score = 93 (37.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 34/111 (30%), Positives = 51/111 (45%)
Query: 316 QIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMV---ACGEFHTCAVTLSGDLYT 371
+++S+G GS G+LG G + V + + I +V AC H AV +GD+Y
Sbjct: 135 RVYSFGCGSKGELGQGPLIIRVPFAQPIANFPPPETEVVGLSACMG-HVVAVLSNGDVYG 193
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
WG+G G LG I PRK+ G +++ CG T + G
Sbjct: 194 WGNG--RKGQLGAPEGIITE-PRKIEGVP--FKVAKAACGKEFTCLVGEPG 239
Score = 81 (33.6 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 318 FSWGEGSGGKLGHGVEADVSYPK--LIDALNG-------SNIHMVACGEFHTCAVTLSGD 368
F+ G G+LG G + D+S PK L + G S + VA G HT +T G+
Sbjct: 5 FALGSNGSGQLGIGHKEDISVPKPALFSSAAGELSANPTSPVVQVAAGGNHTLLLTQDGE 64
Query: 369 LYTWGD 374
+Y+ GD
Sbjct: 65 IYSSGD 70
Score = 78 (32.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 31/105 (29%), Positives = 45/105 (42%)
Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEV 592
L A G + S G D+GQL +P K + IA GS H+ A+ ++ V
Sbjct: 277 LQADGSILSWGRNDHGQL-APSELPK-------------MSQIAVGSEHVVAIDEARQSV 322
Query: 593 YTWGKGANGQLG-HGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
WG G +G G ++N Q T + K + GS+ TA
Sbjct: 323 AAWGWGEHGNCGPQVQDDNSQGNTGWNVIAS--AKHIPPGSSITA 365
Score = 66 (28.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLG 329
+A G H +L+T+ G+I+S G+ + G G
Sbjct: 49 VAAGGNHTLLLTQDGEIYSSGDPASGACG 77
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 151 (58.2 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 58/179 (32%), Positives = 81/179 (45%)
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--DISFCKVACGHSITIALTATGQVFSMGS 545
LF G G G+LG GD R +C++ + VA G T+A+T G +FS GS
Sbjct: 446 LFICGFGPGGRLGTGDESTRFSFVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGS 505
Query: 546 ADYGQLGS--PGSTGK-------FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
+GQLG P + K P +I K I A + H +VV S S +YT+G
Sbjct: 506 NKFGQLGYGLPRANNKDDVPVQLSPRQIFNPFKKEVILGAAASAVH-SVVYSTSGLYTFG 564
Query: 597 KGANGQLGHGDNENKQ-----TPTLVEA-LRDKQVKSVVCGSNFTAAICLHKGVSIADH 649
K GQLG D++ + TP V A L ++SV TA + + V + H
Sbjct: 565 KN-EGQLGLVDSDARSLEVQTTPRRVGASLFSTPIQSVSATDQATAILLQNHEVWVFAH 622
Score = 145 (56.1 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 75/309 (24%), Positives = 134/309 (43%)
Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK--QGQIFSWGEGSGGKLGHGVEA 334
SS D D LP +++ L Q++A H ++T + +F G G GG+LG G E+
Sbjct: 405 SSPDPSDQDLPAFIKARP-LKIQTLAMSKLHTAILTDDPESNLFICGFGPGGRLGTGDES 463
Query: 335 DVSYPKLIDA--LNGSNIHMVACGEFHTCAVTLSGDLYTWGD---GIHNLGL--LGQVSE 387
I+ L + VA G+ HT A+T GD+++WG G GL +
Sbjct: 464 TRFSFVCIEGGGLANKKVASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGLPRANNKDD 523
Query: 388 ISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
+ + PR++ + I H+ +++G L+TFG G LG D + S+
Sbjct: 524 VPVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG-LYTFGKNE-GQLGLVDSDARSL- 580
Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG--LSSKKLFTWGDGAEGQLGHG-D 503
EV+T + V AS ++ T ++ T + L + +++ + +L +
Sbjct: 581 -EVQTTP--RRVGAS--LFSTP--IQSVSATDQATAILLQNHEVWVFAHYGYSRLSFPLE 633
Query: 504 AEPRVVP---LCVKVSDDIS-FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
R + + + I+ K+ G + AL+++G VF++ L S ST
Sbjct: 634 INSRFIRDSFMATRYDTSINRIVKIRSGGNTICALSSSGDVFTVQVNKLENLPSLTSTTN 693
Query: 560 FPTRIEGNI 568
P +I ++
Sbjct: 694 -PAKIRNSL 701
Score = 49 (22.3 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 27/80 (33%), Positives = 35/80 (43%)
Query: 152 SSISSDLTNKDSGD-TQPILVAYENSPQNRLGKAFS-EVLS-FTAAAKAYTRAESVSKSL 208
++I+ L +D D T P + P L K E S F A T S+SL
Sbjct: 260 ATIAQALMARDVRDATDPSKPGFSGHPSGGLIKIKDREGYSPFDVYASTIT-----SRSL 314
Query: 209 N-FVASGGLDDANSRSSTAD 227
V GLDDA+S SS+ D
Sbjct: 315 GPLVPDHGLDDASSVSSSDD 334
Score = 49 (22.3 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 397 SGQMEGLQISS----ICCGPWHTAAITSAGKLFTF 427
SG MEGL S CC PW A +++ F
Sbjct: 8 SGSMEGLTGSDWPVRTCCYPWLFLASSASSSALMF 42
Score = 45 (20.9 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLI 342
++F++G LG G + D YP+ I
Sbjct: 352 EVFTFGSNKNLNLGVGDQDDRQYPERI 378
Score = 44 (20.5 bits), Expect = 9.6e-05, Sum P(4) = 9.6e-05
Identities = 13/46 (28%), Positives = 18/46 (39%)
Query: 142 HTQKNSPSH-VSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFS 186
H SP +SS+ + K S T P+ +E R K S
Sbjct: 153 HLNAGSPGPMISSLGASPKGKKSTGTSPVTSVFERGGGPRSTKPIS 198
Score = 43 (20.2 bits), Expect = 4.9e-05, Sum P(4) = 4.9e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREV 449
++FTFG LG GD+ P +
Sbjct: 352 EVFTFGSNKNLNLGVGDQDDRQYPERI 378
Score = 38 (18.4 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
Identities = 22/88 (25%), Positives = 38/88 (43%)
Query: 735 EKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISAS---PPGSRRVS 791
++ M R G PK +S A P+ P+S +S+ +SA+ PP + R +
Sbjct: 1432 QRPGMTLRQTVAGAPSPKRESA-AKPT--------PSSS--RSHVVSATTTRPPLAPRPA 1480
Query: 792 RAPSPISRKSSPACSITMNSFTDLANSE 819
A +P + P +T+ S + E
Sbjct: 1481 DAVAP---STPPTDQVTIKSVRHIPRPE 1505
>CGD|CAL0000172 [details] [associations]
symbol:orf19.7574 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 139 (54.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL--IDALNGSNIHMVACGEF 358
I H+V+VT+ G++FS G GS G+LGHG+ +Y K I+ N I VA
Sbjct: 234 ITISKNHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSN 293
Query: 359 HTCAVTLSGDLYTWG-DGIHNLGL 381
H+ A+T ++Y WG + + LG+
Sbjct: 294 HSIALTTDNEVYAWGLNSFNQLGV 317
>UNIPROTKB|Q5ACR8 [details] [associations]
symbol:CaO19.7574 "Potential ankyrin repeat protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 CGD:CAL0000172 INTERPRO:IPR000408 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:AACQ01000032
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_719336.1
ProteinModelPortal:Q5ACR8 GeneID:3638930 KEGG:cal:CaO19.7574
HOGENOM:HOG000094547 Uniprot:Q5ACR8
Length = 1439
Score = 139 (54.0 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL--IDALNGSNIHMVACGEF 358
I H+V+VT+ G++FS G GS G+LGHG+ +Y K I+ N I VA
Sbjct: 234 ITISKNHSVVVTQDGELFSCGVGSRGRLGHGLTDLNNYFKFKRIEFFNDKTIKDVAISSN 293
Query: 359 HTCAVTLSGDLYTWG-DGIHNLGL 381
H+ A+T ++Y WG + + LG+
Sbjct: 294 HSIALTTDNEVYAWGLNSFNQLGV 317
>DICTYBASE|DDB_G0286231 [details] [associations]
symbol:DDB_G0286231 "FYVE-type zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0046872
"metal ion binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
dictyBase:DDB_G0286231 GO:GO:0046872 EMBL:AAFI02000085
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG247076
RefSeq:XP_637797.1 ProteinModelPortal:Q54M34 PRIDE:Q54M34
EnsemblProtists:DDB0305107 GeneID:8625511 KEGG:ddi:DDB_G0286231
InParanoid:Q54M34 OMA:CDECYRM ProtClustDB:CLSZ2430113
Uniprot:Q54M34
Length = 88
Score = 110 (43.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 652 CSGCXXXXXXXXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINK---PYRVCDDCFIKLN 708
C C H+C CGLV+C CSS + A P++N P RVCD+C+ +N
Sbjct: 32 CHKCKASFTLLNRRHHCRRCGLVFCNRCSSNE----AKIPQLNYNFVPVRVCDECYRMVN 87
>FB|FBgn0037116 [details] [associations]
symbol:CG7158 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0031982 "vesicle" evidence=ISS] [GO:0035011 "melanotic
encapsulation of foreign target" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 EMBL:AE014296 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0035011 EMBL:AY061403
RefSeq:NP_649347.1 UniGene:Dm.3610 SMR:Q9VNZ8 IntAct:Q9VNZ8
MINT:MINT-1031217 EnsemblMetazoa:FBtr0078462 GeneID:40410
KEGG:dme:Dmel_CG7158 UCSC:CG7158-RA FlyBase:FBgn0037116
InParanoid:Q9VNZ8 OMA:HWFILFN OrthoDB:EOG4S7H4T GenomeRNAi:40410
NextBio:818636 Uniprot:Q9VNZ8
Length = 1486
Score = 138 (53.6 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 66/323 (20%), Positives = 124/323 (38%)
Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG-EFHTCAVTLSGDLYTWGDG-IHNLG 380
GS + G DV +P L + + A G + G ++ G + +G
Sbjct: 103 GSVQRQATGSGRDVGHPHAWQTLGFDPLELHAEGVRIRRVCCSAQGVVFVGASGETYVMG 162
Query: 381 LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
G+V + PR + EG ++ + G H + + + D AL
Sbjct: 163 SCGEVFKAEQQ-PRHMRLYEEGKELLDLAAGNEHFVMLVAP---YNLADD---ALQLSVA 215
Query: 441 SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
S+ P + +K++ S G + L +LFT+G G LG
Sbjct: 216 SAKEEPEDERA--SVKSI--SSGHSERSVAANTRHLLHQGYALLHTQLFTFGASNNGLLG 271
Query: 501 HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF 560
GD R + ++ D + C +A G T+A T G+++ G ++ QLG S+
Sbjct: 272 SGDHIRRANVMRLQKLDSMGVCSIAAGLEHTVARTLDGRLYHWGLNNHSQLGEDVSSPME 331
Query: 561 PTRIEGN----IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
T E I+ + CG YH ++++ ++++ + H + TL
Sbjct: 332 ITITENTAALPIEQNSALEATCGDYHTLLLNASGQIHSLQPAP--PMRHLQQSSTYAQTL 389
Query: 617 VE----ALRDKQVKSVVCGSNFT 635
++ A +Q++ ++C +T
Sbjct: 390 LQLQLGAAWPRQLRLLMCSGGYT 412
>POMBASE|SPCC330.11 [details] [associations]
symbol:btb1 "BTB/POZ domain protein Btb1" species:4896
"Schizosaccharomyces pombe" [GO:0000151 "ubiquitin ligase complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00023 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 UniPathway:UPA00143
PomBase:SPCC330.11 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0016567 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006511 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0000151 eggNOG:COG5184
PIR:T41321 RefSeq:NP_587711.1 ProteinModelPortal:O74881
IntAct:O74881 STRING:O74881 EnsemblFungi:SPCC330.11.1
GeneID:2538714 KEGG:spo:SPCC330.11 OMA:STSELCT OrthoDB:EOG42VCR5
NextBio:20799899 Uniprot:O74881
Length = 1347
Score = 150 (57.9 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 66/237 (27%), Positives = 104/237 (43%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
+L+ FG LG + S P V LK S ++ I++V S
Sbjct: 150 ELYGFGTNVNNTLGIANGKEPSSPERVFLLKNQTESPTSGQLFSRDKILDVQASKFHSVV 209
Query: 483 LS---SKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
L+ S+ ++ G GA G++G D + +P+ + I +++ H+ ++ALT G
Sbjct: 210 LTDEPSQNVYVCGIGAGGRIGFNTDVQYNFIPIPGIIHKVI---QISVSHTHSLALTKFG 266
Query: 539 QVFSMGSADYGQLGSPGSTGK-------FPTRIEGNIKHRYIEDIACG-SYHIAVVSSKS 590
++S G G+LG K P RI K I +A G SY +A +
Sbjct: 267 SIYSWGKNGSGELGLSNDELKKDDPIQITPRRISA-FKDYQIIGMAAGKSYSVAWTDT-- 323
Query: 591 EVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
++Y+WG NGQLG D+ + TP V L + +V C + A ICL + SI
Sbjct: 324 DIYSWGLN-NGQLGISDHISVVSTPRRVAGLLSPVIHAV-CTTR--ATICLLQNNSI 376
Score = 38 (18.4 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 668 CYNCGLVYCKLCSSKKSMKTALAPEINKPYR 698
C G + + SKK K++ +P PY+
Sbjct: 483 CTRNGTCWKRELRSKKREKSSSSPYSRGPYK 513
>POMBASE|SPAC10F6.04 [details] [associations]
symbol:SPAC10F6.04 "RCC domain protein Ats1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0007017 "microtubule-based process" evidence=ISO]
PomBase:SPAC10F6.04 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0006400 GO:GO:0007017 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
KO:K15462 OrthoDB:EOG4H75MP PIR:T37498 RefSeq:NP_593255.1
ProteinModelPortal:O42645 STRING:O42645 EnsemblFungi:SPAC10F6.04.1
GeneID:2542973 KEGG:spo:SPAC10F6.04 OMA:WIVIEEN NextBio:20804007
Uniprot:O42645
Length = 351
Score = 129 (50.5 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 79/333 (23%), Positives = 138/333 (41%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
+ S G +LG + DV P+++ I ++CG HT + L D W G
Sbjct: 2 LLSLGSNGNFQLGLNNDEDVYSPQIVPFDRA--IEKISCGGNHT--LLLDEDSQLWACGD 57
Query: 377 HNLGLLG-QVSE--ISHWIPR--KVSGQMEGLQISSICCGPWHTAAITSAGK--LFTFGD 429
+ G G +V E + P ++ ++ + + CG W + I A + + + G+
Sbjct: 58 NRKGQCGYEVKEPLYNPLSPDYLRIFTRVSHERWVFLTCG-WEFSVIVHADRRRVCSCGE 116
Query: 430 GTFGALGHGDRSSTSVPREVET--LKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSK 486
G G LG G+RS++ RE++ L + + ++ S G+ H + T+ N
Sbjct: 117 GLSGELGQGNRSNSQGLREIDIPYLDDKEFIIDISAGLRHWICV------TNEGN----- 165
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVS--DDISFCK-VACGHSITIALTATGQVFSM 543
L+ GDG +GQLG P V+ KVS I + V CG + L TG V +
Sbjct: 166 -LYGCGDGRKGQLG-----PVVMKTVNKVSFLGRIEHAQAVVCGVQFSAVLQETGHVIVL 219
Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
G + + + + +I I+ ++++S++ VY +G+ Q
Sbjct: 220 GGEKWNVAAECDAWQANNSELSSSIC-----SISANWSTLSLLSTEGCVYAFGRCDRAQK 274
Query: 604 GH---GDNENKQTPTLVEALRDKQVKSVVCGSN 633
H D + T LR K+ ++ G N
Sbjct: 275 AHTKASDIVQIASGTEHNILRTKKGSVLIYGWN 307
>SGD|S000004067 [details] [associations]
symbol:FMP25 "Protein required for assembly of respiratory
complex III" species:4932 "Saccharomyces cerevisiae" [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IMP] [GO:0031305 "integral to mitochondrial inner
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
SGD:S000004067 INTERPRO:IPR000408 Pfam:PF00415 EMBL:BK006945
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0031305
EMBL:U53880 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0034551 EMBL:Z73250 EMBL:Z73249 EMBL:AY723844
PIR:S64909 RefSeq:NP_013178.1 ProteinModelPortal:Q08023 SMR:Q08023
DIP:DIP-4474N IntAct:Q08023 MINT:MINT-504101 STRING:Q08023
PaxDb:Q08023 PeptideAtlas:Q08023 EnsemblFungi:YLR077W GeneID:850766
KEGG:sce:YLR077W CYGD:YLR077w HOGENOM:HOG000111193 OMA:KLIEPED
OrthoDB:EOG4ZCXDB NextBio:966924 Genevestigator:Q08023
GermOnline:YLR077W Uniprot:Q08023
Length = 583
Score = 134 (52.2 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 48/165 (29%), Positives = 70/165 (42%)
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALG---HGDRSSTSVPREVETLKELKTVMA 460
+I I CG +HT AI G+++ FG FG L + S PR V K
Sbjct: 373 EIKKIACGSYHTLAIDKTGEIYAFGWNRFGQLALPISYNLEYVSFPRSVT--HAFKPHFP 430
Query: 461 SCGVWHTAAIV---EVAGKTSGSNGLSSKK-LFTWGDGAEGQLGHGDAE-PRVVPLCVKV 515
W I E + T G +S F +G+G G+LG+ + + P+ +K
Sbjct: 431 GMTNWKCVDIHCDDETSFVTIRKPGSTSDHHYFAFGNGLFGELGNNTFKNSQCDPIKIK- 489
Query: 516 SDDISFCKVACG-HSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
SDD +CG H + +V + G+ D+GQLG T K
Sbjct: 490 SDDKKLTNWSCGSHCVFTETEQENEVIAWGNNDHGQLGIGKKTMK 534
Score = 44 (20.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 335 DVSYPKLIDALNGS---NIHMVACGEFHT-CAVTLSGDLYTWGD 374
D +P + L+G +I + +F+T A+ GDL +W D
Sbjct: 172 DSLFPVRVPNLDGRKFRDILLAPSDDFNTNFAIDEKGDLISWDD 215
Score = 38 (18.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGK 327
GS H VL++ G+ + G+ K
Sbjct: 303 GSHHLVLLSNLGKAYCCATGNDQK 326
>POMBASE|SPAC19A8.05c [details] [associations]
symbol:sst4 "sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex subunit Sst4" species:4896
"Schizosaccharomyces pombe" [GO:0005628 "prospore membrane"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0006900 "membrane budding" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IGI] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISO]
[GO:0033565 "ESCRT-0 complex" evidence=IPI] [GO:0043130 "ubiquitin
binding" evidence=IMP] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISO] [GO:0045324
"late endosome to vacuole transport" evidence=IMP] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 PomBase:SPAC19A8.05c Pfam:PF02809 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0006897 GO:GO:0010008 GO:GO:0005628 HSSP:P40343
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 GO:GO:0043130 GO:GO:0032266
GO:GO:0043328 GO:GO:0006900 GO:GO:0045053 GO:GO:0031321
InterPro:IPR018205 SMART:SM00288 KO:K12182 InterPro:IPR017073
PIRSF:PIRSF036956 GO:GO:0033565 OMA:VRVDDGC OrthoDB:EOG40VZXZ
PIR:T37956 RefSeq:NP_593787.1 ProteinModelPortal:O13821 SMR:O13821
STRING:O13821 EnsemblFungi:SPAC19A8.05c.1 GeneID:2542403
KEGG:spo:SPAC19A8.05c NextBio:20803462 Uniprot:O13821
Length = 610
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 32/94 (34%), Positives = 42/94 (44%)
Query: 648 DHSICSGCXXXXXXXXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKL 707
D +C C H+C NCG V+C CSSK L IN+P RVCD C+ L
Sbjct: 172 DSEVCLRCRTPFTFTNRKHHCRNCGGVFCNQCSSKTLSLPHLG--INQPVRVCDSCY-SL 228
Query: 708 NTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNS 741
T + GS S+ RN ++ K N+
Sbjct: 229 RTKPK-GSKSRA-RNERKFHAKTRKTPSKPVTNN 260
>FB|FBgn0031450 [details] [associations]
symbol:Hrs "Hepatocyte growth factor regulated tyrosine
kinase substrate" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0008333 "endosome to
lysosome transport" evidence=TAS] [GO:0005769 "early endosome"
evidence=NAS] [GO:0005770 "late endosome" evidence=NAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016082 "synaptic
vesicle priming" evidence=NAS] [GO:0008021 "synaptic vesicle"
evidence=NAS] [GO:0016079 "synaptic vesicle exocytosis"
evidence=ISS] [GO:0006887 "exocytosis" evidence=TAS] [GO:0008293
"torso signaling pathway" evidence=NAS] [GO:0016197 "endosomal
transport" evidence=TAS] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway" evidence=NAS]
[GO:0005768 "endosome" evidence=TAS] [GO:0006897 "endocytosis"
evidence=IMP;NAS] [GO:0016050 "vesicle organization" evidence=NAS]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007298 "border
follicle cell migration" evidence=IMP] [GO:0033565 "ESCRT-0
complex" evidence=IDA] [GO:0045752 "positive regulation of Toll
signaling pathway" evidence=IMP] InterPro:IPR000306
InterPro:IPR002014 Pfam:PF00790 Pfam:PF01363 PROSITE:PS50179
SMART:SM00064 GO:GO:0007275 GO:GO:0005938 GO:GO:0048471
GO:GO:0006886 EMBL:AE014134 GO:GO:0046872 GO:GO:0008021
GO:GO:0008293 GO:GO:0006897 GO:GO:0016197 GO:GO:0007298
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 eggNOG:NOG257212
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 GO:GO:0016050
Gene3D:1.25.40.90 InterPro:IPR008942 SUPFAM:SSF48464 GO:GO:0042059
GO:GO:0016082 InterPro:IPR018205 SMART:SM00288
GeneTree:ENSGT00670000098022 KO:K12182 OMA:QEYLEMQ
InterPro:IPR024641 InterPro:IPR017073 Pfam:PF12210
PIRSF:PIRSF036956 EMBL:AY071846 EMBL:AY051789 EMBL:BT001591
RefSeq:NP_525099.3 RefSeq:NP_722830.2 RefSeq:NP_722831.1
UniGene:Dm.274 PDB:1DVP PDBsum:1DVP ProteinModelPortal:Q960X8
SMR:Q960X8 DIP:DIP-32844N IntAct:Q960X8 MINT:MINT-331788
STRING:Q960X8 PaxDb:Q960X8 PRIDE:Q960X8 EnsemblMetazoa:FBtr0089750
EnsemblMetazoa:FBtr0089751 GeneID:33458 KEGG:dme:Dmel_CG2903
CTD:33458 FlyBase:FBgn0031450 HOGENOM:HOG000021325
InParanoid:Q960X8 OrthoDB:EOG476HFM PhylomeDB:Q960X8
EvolutionaryTrace:Q960X8 GenomeRNAi:33458 NextBio:783669
Bgee:Q960X8 GermOnline:CG2903 GO:GO:0033565 GO:GO:0045752
Uniprot:Q960X8
Length = 760
Score = 129 (50.5 bits), Expect = 0.00018, P = 0.00018
Identities = 43/153 (28%), Positives = 65/153 (42%)
Query: 647 ADHSICSGCXXXXXXXXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIK 706
AD +C C H+C NCG V+C C++K+ I K RVCD CF
Sbjct: 159 ADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAKQCPLPKYG--IEKEVRVCDGCFAA 216
Query: 707 LNT-TSESGSNSQIPRNS-SGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNG 764
L TS SG PR + S L T + + + + Q + + + +L+
Sbjct: 217 LQRPTSGSGGAKSGPRPADSELPAEYLNSTLAQQVQTPARKTEQELKEEEELQLALALS- 275
Query: 765 KFQWEPNSDFIKSNKISASPPGSRRVS-RAPSP 796
Q E + K+ + PP + R+ R+PSP
Sbjct: 276 --QSEAEQ---QKPKLQSLPPAAYRMQQRSPSP 303
>UNIPROTKB|G4NC24 [details] [associations]
symbol:MGG_00456 "BTB domain and ankyrin repeat protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
SMART:SM00248 INTERPRO:IPR000408 EMBL:CM001235 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 RefSeq:XP_003718611.1
ProteinModelPortal:G4NC24 EnsemblFungi:MGG_00456T0 GeneID:2674172
KEGG:mgr:MGG_00456 Uniprot:G4NC24
Length = 1598
Score = 138 (53.6 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 72/304 (23%), Positives = 126/304 (41%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQ--GQIFSWGEGSGGKLGHGVEADV--SYPKL 341
LP ++ + ++ ++ H+ ++T ++ G G GG+LG + V +Y +
Sbjct: 311 LPAMILTRPII-VHNVVLSKFHSAVITTDPVSNLYICGVGRGGRLGLSDDQRVRFTYVPV 369
Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLL-----GQVSEISHWIPRK 395
AL + V G+ HT AVT G+L+TWG ++ LG + E P++
Sbjct: 370 QGALADRKVTQVVLGQDHTMAVTDKGELWTWGSNAYSQLGYALPPPAKKDEEPMSLAPKQ 429
Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
V G ++ + + H+ A T+ +F +G + G L D S R +E +
Sbjct: 430 VFGALKKEVVIGVSASAIHSVAHTT-NSVFCWGKNS-GQLALMDADS----RSLEVQQTP 483
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL---FT-WGDGA------EGQLGHGDAE 505
+ V AS +A IV V+ + L + + FT +G + + +
Sbjct: 484 RKVAASL---FSAPIVMVSAIDKATTVLLANHIVCVFTNYGYNMVKFPEIDPFATYHISN 540
Query: 506 PRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI 564
P VV S C + G A+T G +F MG + S ST P +I
Sbjct: 541 PAVVLGYDAAASKGQRICHITSGGETIAAVTGRGDLFVMGLNHNADVSSSASTTN-PAKI 599
Query: 565 EGNI 568
+G++
Sbjct: 600 KGSV 603
Score = 44 (20.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 19/80 (23%), Positives = 34/80 (42%)
Query: 731 KRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQ-WEPNSDFIK-SNK-ISAS---- 783
+R ++ M + ++P + A P + W+P K S K ++A+
Sbjct: 1331 ERKKHQQQMQAALLAQEANQPNKTPWEAVPGQKDRGSPWKPTPATTKVSLKDVTAAEKHT 1390
Query: 784 PPGSRRVSRAPSPISRKSSP 803
PP S S A ++ +SSP
Sbjct: 1391 PPASAAASMAKPFVAAESSP 1410
>WB|WBGene00014019 [details] [associations]
symbol:ZK632.12 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS]
Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849 Pfam:PF01363
PROSITE:PS50003 SMART:SM00064 SMART:SM00233 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181 GO:GO:0032266
GeneTree:ENSGT00680000099588 eggNOG:NOG308864 HOGENOM:HOG000231519
OMA:INKCVSD PIR:D88567 PIR:S40944 RefSeq:NP_499183.1
ProteinModelPortal:P34657 SMR:P34657 DIP:DIP-26764N IntAct:P34657
MINT:MINT-1042247 STRING:P34657 PaxDb:P34657
EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2 GeneID:176397
KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397 WormBase:ZK632.12
InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINK-PYRVCDDCFIKLNTTSESGSNSQIPRNSS 724
H+C NCG V C CSS+ T ++K P RVCD CF L++ + S+ P+ +
Sbjct: 173 HHCRNCGRVVCGACSSR----TFRIDNVHKKPVRVCDHCFDSLSSATPGQEESE-PKTGN 227
Query: 725 GLFQNCKRVTEKENMNSRSATDGQSKP 751
L ++ +N + +S+P
Sbjct: 228 RLHHEDSSSDSEDEVNGSGRSSNESRP 254
>UNIPROTKB|P34657 [details] [associations]
symbol:ZK632.12 "Uncharacterized protein ZK632.12"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00169 InterPro:IPR000306 InterPro:IPR001849
Pfam:PF01363 PROSITE:PS50003 SMART:SM00064 SMART:SM00233
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 EMBL:Z22181
GO:GO:0032266 GeneTree:ENSGT00680000099588 eggNOG:NOG308864
HOGENOM:HOG000231519 OMA:INKCVSD PIR:D88567 PIR:S40944
RefSeq:NP_499183.1 ProteinModelPortal:P34657 SMR:P34657
DIP:DIP-26764N IntAct:P34657 MINT:MINT-1042247 STRING:P34657
PaxDb:P34657 EnsemblMetazoa:ZK632.12.1 EnsemblMetazoa:ZK632.12.2
GeneID:176397 KEGG:cel:CELE_ZK632.12 UCSC:ZK632.12 CTD:176397
WormBase:ZK632.12 InParanoid:P34657 NextBio:892398 Uniprot:P34657
Length = 266
Score = 117 (46.2 bits), Expect = 0.00064, P = 0.00064
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINK-PYRVCDDCFIKLNTTSESGSNSQIPRNSS 724
H+C NCG V C CSS+ T ++K P RVCD CF L++ + S+ P+ +
Sbjct: 173 HHCRNCGRVVCGACSSR----TFRIDNVHKKPVRVCDHCFDSLSSATPGQEESE-PKTGN 227
Query: 725 GLFQNCKRVTEKENMNSRSATDGQSKP 751
L ++ +N + +S+P
Sbjct: 228 RLHHEDSSSDSEDEVNGSGRSSNESRP 254
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 902 832 0.00080 122 3 11 23 0.43 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 231
No. of states in DFA: 627 (67 KB)
Total size of DFA: 413 KB (2198 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 73.30u 0.13s 73.43t Elapsed: 00:00:04
Total cpu time: 73.47u 0.13s 73.60t Elapsed: 00:00:04
Start: Tue May 21 19:11:43 2013 End: Tue May 21 19:11:47 2013
WARNINGS ISSUED: 1